NO13G00460, NO13G00460 (gene) Nannochloropsis oceanica

Overview
NameNO13G00460
Unique NameNO13G00460
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3260
Alignment locationchr13:155565..158824 +

Link to JBrowse

Properties
Property NameValue
DescriptionIntegrin alpha-2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:155565..158824 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007155cell adhesion
GO:0007155cell adhesion
Vocabulary: Cellular Component
TermDefinition
GO:0008305integrin complex
GO:0008305integrin complex
Vocabulary: INTERPRO
TermDefinition
IPR013517FG-GAP
IPR013519Int_alpha_beta-p
IPR000413Integrin_alpha
Homology
BLAST of NO13G00460 vs. NCBI_GenBank
Match: ODC00645.1 (hypothetical protein A3197_10040 [Candidatus Thiodiazotropha endoloripes])

HSP 1 Score: 180.3 bits (456), Expect = 2.300e-41
Identity = 148/454 (32.60%), Postives = 229/454 (50.44%), Query Frame = 0
Query:  293 KRIGAMNVDFNLPISPGDRFGSSVSVLLPAGDLDRNWNTLKVAVGAPGDHTYMKRQGAVFILSLANFGTTLINYHKIIPGEGVLAGQACKYSSFGTAVATLGDLDTDGFSDIAVGAPFQE----ETGVVYILFLAFGGSVAKYIKIGGSDKFGGAVXXXXXXXXXXXXXXLAIGDEFGCSIANIEDLNGDGVADLVVGACGDTDSRKGFAPGGKGREACIASGAIYILFMNIDGTVKYHRKISARSGNLLVGPQPGDRFGASVAFVG--HRNGCTVIAVGAPFADGAGHEVGAVYLLELLQTGDVKRFEILSSAYVPAPPGSARSPYIYMSAPLASHDYFGSAVAAM-DVDRDGGWDLLVGSRGLNQRTQDEGASFVCYMDGVRGGLTGWEQVASQSGVL-VPVQPGEQFGAAISVLDDPSRNPSSLIFVGAP---GGCMDAVGGAVYVLRIQP 736
            ++I      F+  +  GD+FG++++ +   GDL+ +   + +AVG+P D    + +GAV++L L + G  +    KI   +G   G       FG+A+A+L DL+ DGF DI V AP  +    + G +++LFL   G+V  Y KI  S++ G                 L   D+FG ++ANI DLN DG+ DL VG   D D       GG  R      GA++ILFMN DGTV   +KIS+  G+L   P  GDRFG+SV  VG    +G   IAVG    D  G + GAV++L L   G V   + +S        G        +   L+  D FGSA+A + D++ DG  DL+VG+ G +    + GA+++ +M G  G +    +++   G     +   +QFG++++ + D + +    + VGAP    G  D   GA ++L + P
Sbjct:   35 QKISDSRGQFSGDLDDGDQFGAALANI---GDLEGD-GVIDLAVGSPYDDDNGENRGAVWVLFLDDDG-QVDTQQKISDSKGSFDGDLDDGDLFGSALASLDDLNGDGFRDIVVSAPMDDDGGTDHGALWVLFLKDDGTVESYQKI--SEESG------------ELNENLDADDQFGHAVANIGDLNNDGITDLAVGMPNDDD-------GGTDR------GAVWILFMNSDGTVSARQKISSEKGDLERKPNDGDRFGSSVTAVGDLDDDGVVDIAVGTSGDDDGGSDRGAVWVLFLNSDGTVDGLKRISH-----NRGG-------LEDQLSDGDRFGSALANLGDLNDDGNDDLMVGAPGSDDGGSNRGATWILFMQG-DGEIISASKISDTEGDFDGSLNDNDQFGSSLAAIGDLNEDDHQDLAVGAPFDDNGGTDK--GATWILFLGP 441          
BLAST of NO13G00460 vs. NCBI_GenBank
Match: WP_069025031.1 (hypothetical protein [Candidatus Thiodiazotropha endoloripes] >ODB94472.1 hypothetical protein A3196_18270 [Candidatus Thiodiazotropha endoloripes])

HSP 1 Score: 179.9 bits (455), Expect = 2.900e-41
Identity = 150/454 (33.04%), Postives = 227/454 (50.00%), Query Frame = 0
Query:  293 KRIGAMNVDFNLPISPGDRFGSSVSVLLPAGDLDRNWNTLKVAVGAPGDHTYMKRQGAVFILSLANFGTTLINYHKIIPGEGVLAGQACKYSSFGTAVATLGDLDTDGFSDIAVGAPFQE----ETGVVYILFLAFGGSVAKYIKIGGSDKFGGAVXXXXXXXXXXXXXXLAIGDEFGCSIANIEDLNGDGVADLVVGACGDTDSRKGFAPGGKGREACIASGAIYILFMNIDGTVKYHRKISARSGNLLVGPQPGDRFGASVAFVG--HRNGCTVIAVGAPFADGAGHEVGAVYLLELLQTGDVKRFEILSSAYVPAPPGSARSPYIYMSAPLASHDYFGSAVAAM-DVDRDGGWDLLVGSRGLNQRTQDEGASFVCYMDGVRGGLTGWEQVASQSGVL-VPVQPGEQFGAAISVLDDPSRNPSSLIFVGAP---GGCMDAVGGAVYVLRIQP 736
            ++I      F+  +  GDRFG++++ +   GDL+ +   + +AVG+P D    + +GAV++L L + G  +    KI   +G   G       FG+A+A L DL+ DGF DI V AP  +    + G +++LFL   G+V  Y KI  S++ G                 L   D+FG ++ANI DLN DG+ DL VG   D D       GG  R      GA++ILFMN DGTV   +KIS+  G L   P  GDRFG+SV  VG    +G   IAVG    D  G + GAV++L L   G V   + +S        G        +   L+  D FGSA+A + D++ DG  DL+VG+ G +    + GA++V +M G  G +    +++   G     +   +QFG++++ + D + +    + VGAP    G  D   GA ++L + P
Sbjct:   35 QKISDSRGQFSGDLDDGDRFGAALANI---GDLEGD-GVIDLAVGSPYDDDNGENRGAVWVLFLDDDG-QVDTQQKISDSKGSFDGDLDDGDLFGSALAPLDDLNGDGFRDIVVSAPMDDDGGTDHGALWVLFLKDDGTVESYQKI--SEESG------------ELNENLDADDQFGHAVANIGDLNNDGITDLAVGMPNDDD-------GGTDR------GAVWILFMNSDGTVSARQKISSEKGGLERKPNDGDRFGSSVTAVGDLDDDGVIDIAVGTSGDDDGGTDRGAVWVLFLNSDGTVDGLKRISH-----NRGG-------LEDQLSDGDRFGSALANLGDLNNDGNDDLIVGAPGSDDGGSNRGATWVLFMQG-DGEIISASKISDTEGDFDGSLNDNDQFGSSLAGIGDLNEDEHQDLAVGAPFDDNGGTDK--GATWILFLGP 441          
BLAST of NO13G00460 vs. NCBI_GenBank
Match: WP_069006236.1 (hypothetical protein [Candidatus Thiodiazotropha endoloripes] >ODB83147.1 hypothetical protein A3194_16820 [Candidatus Thiodiazotropha endoloripes] >ODB83514.1 hypothetical protein A3193_11440 [Candidatus Thiodiazotropha endoloripes] >ODB90906.1 hypothetical protein A3195_05570 [Candidatus Thiodiazotropha endoloripes])

HSP 1 Score: 179.1 bits (453), Expect = 5.000e-41
Identity = 150/454 (33.04%), Postives = 227/454 (50.00%), Query Frame = 0
Query:  293 KRIGAMNVDFNLPISPGDRFGSSVSVLLPAGDLDRNWNTLKVAVGAPGDHTYMKRQGAVFILSLANFGTTLINYHKIIPGEGVLAGQACKYSSFGTAVATLGDLDTDGFSDIAVGAPFQE----ETGVVYILFLAFGGSVAKYIKIGGSDKFGGAVXXXXXXXXXXXXXXLAIGDEFGCSIANIEDLNGDGVADLVVGACGDTDSRKGFAPGGKGREACIASGAIYILFMNIDGTVKYHRKISARSGNLLVGPQPGDRFGASVAFVG--HRNGCTVIAVGAPFADGAGHEVGAVYLLELLQTGDVKRFEILSSAYVPAPPGSARSPYIYMSAPLASHDYFGSAVAAM-DVDRDGGWDLLVGSRGLNQRTQDEGASFVCYMDGVRGGLTGWEQVASQSGVL-VPVQPGEQFGAAISVLDDPSRNPSSLIFVGAP---GGCMDAVGGAVYVLRIQP 736
            ++I      F+  +  GDRFG++++ +   GDL+ +   + +AVG+P D    + +GAV++L L + G  +    KI   +G   G       FG+A+A L DL+ DGF DI V AP  +    + G +++LFL   G+V  Y KI  S++ G                 L   D+FG ++ANI DLN DG+ DL VG   D D       GG  R      GA++ILFMN DGTV   +KIS+  G L   P  GDRFG+SV  VG    +G   IAVG    D  G + GAV++L L   G V   + +S        G        +   L+  D FGSA+A + D++ DG  DL+VG+ G +    + GA++V +M G  G +    +++   G     +   +QFG++++ + D + +    + VGAP    G  D   GA ++L + P
Sbjct:   35 QKISDSRGQFSGDLDDGDRFGAALANI---GDLEGD-GVIDLAVGSPYDDDNGEDRGAVWVLFLDDDG-QVDTQQKISDSKGSFDGDLDDGDLFGSALAPLDDLNGDGFRDIVVSAPMDDDGGTDHGALWVLFLKDDGTVESYQKI--SEESG------------ELNENLDADDQFGHAVANIGDLNNDGITDLAVGMPNDDD-------GGTDR------GAVWILFMNSDGTVSARQKISSEKGGLERKPNDGDRFGSSVTAVGDLDDDGVIDIAVGTSGDDDGGTDRGAVWVLFLNSDGTVDGLKRISH-----NRGG-------LEDQLSDGDRFGSALANLGDLNNDGNDDLMVGAPGSDDGGSNRGATWVLFMQG-DGEIISASKISDTEGDFDGSLNDNDQFGSSLAGIGDLNEDEHQDLAVGAPFDDNGGTDK--GATWILFLGP 441          
BLAST of NO13G00460 vs. NCBI_GenBank
Match: WP_108279313.1 (hypothetical protein [gamma proteobacterium symbiont of Ctena orbiculata] >PUB85537.1 hypothetical protein DBP00_13045 [gamma proteobacterium symbiont of Ctena orbiculata])

HSP 1 Score: 170.2 bits (430), Expect = 2.300e-38
Identity = 148/452 (32.74%), Postives = 226/452 (50.00%), Query Frame = 0
Query:  293 KRIGAMNVDFNLPISPGDRFGSSVSVLLPAGDLDRNWNTLKVAVGAPGDHTYMKRQGAVFILSLANFGTTLINYHKIIPGEGVLAGQACKYSSFGTAVATLGDLDTDGFSDIAVGAPFQE----ETGVVYILFLAFGGSVAKYIKIGGSD-KFGGAVXXXXXXXXXXXXXXLAIGDEFGCSIANIEDLNGDGVADLVVGACGDTDSRKGFAPGGKGREACIASGAIYILFMNIDGTVKYHRKISARSGNLLVGPQPGDRFGASVAFVG--HRNGCTVIAVGAPFADGAGHEVGAVYLLELLQTGDVKRFEILSSAYVPAPPGSARSPYIYMSAPLASHDYFGSAVAAM-DVDRDGGWDLLVGSRGLNQRTQDEGASFVCYMDGVRGGLTGWEQVASQSGVL-VPVQPGEQFGAAISVLDDPSRNPSSLIFVGAPGGCMDAVG----GAVYVL 732
            ++I A + +F+  +  GD+FGS+++ +   GDL+ +     +AVGAP D    + +GAV++L + + G ++ +  KI    G   G       FG+A+A LGDL+ DGF DIAVGAP  +    + G V+ILFL   G V    KI   D  F G                L   D+FG ++A I DLN DGV DL V A  D D       GG  R      GA++ILFMN DGTV   +KIS+  G L   P+  DRFG+++  +G    +G   +AVG    D  G + G +++L L   G V     ++           R  +      L+ +D FG+AV+ + D++ DG  DL VG++  +    + GA ++ +M+ + G +    +++   G     +  G+ FG+A++ L D   +    I VGA   C+D  G    GAV+VL
Sbjct:   40 QKISASSGNFDGDLDSGDQFGSAIATI---GDLEGD-GVSDLAVGAPFDDDSGENRGAVWVLFMDSDG-SVDSEQKISADAGGFDGTLDDEDQFGSAIAPLGDLNNDGFLDIAVGAPLDDDGGSDKGAVWILFLNGEGGVESEQKISDDDGDFPG---------------DLDDDDQFGRALAAIGDLNRDGVNDLAVAAPNDDD-------GGTDR------GAVWILFMNSDGTVSSVQKISSDRGGLDRDPENEDRFGSALTEIGDLDDDGVVDLAVGVSGDDDGGSDRGGLWILFLNDDGSVDSMRRIT---------QTRGGF---EGSLSDNDQFGNAVSNLGDINDDGIVDLAVGAKRSDDGGAERGAVWILFME-INGEVISSTKLSDTEGNFGGDLDSGDHFGSALAHLGDLDGDGIGDIVVGA---CLDDDGDTDSGAVWVL 442          
BLAST of NO13G00460 vs. NCBI_GenBank
Match: OVE82713.1 (hypothetical protein BVY03_00245, partial [bacterium K02(2017)])

HSP 1 Score: 168.7 bits (426), Expect = 6.800e-38
Identity = 139/410 (33.90%), Postives = 199/410 (48.54%), Query Frame = 0
Query:  302 FNLPISPGDRFGSSVSVLLPAGDLDRNWNTLKVAVGAPGDHTYMKRQGAVFILSLANFGTTLINYHKIIPGEGVLAGQACKYSSFGTAVATLGDLDTDGFSDIAVGAPFQ----EETGVVYILFLAFGGSVAKYIKIGGSDKFGGAVXXXXXXXXXXXXXXLAIGDEFGCSIANIEDLNGDGVADLVVGACGDTDSRKGFAPGGKGREACIASGAIYILFMNIDGTVKYHRKISARSGNLLVGPQPGDRFGASVAFVGHRNGCTVI--AVGAPFADGAGHEVGAVYLLELLQTGDVKRFEILSSAYVPAPPGSARSPYIYMSAPLASHDYFGSAVAAM-DVDRDGGWDLLVGSRGLNQRTQDEGASFVCYMDGVRGGLTGWEQVASQSGVLVPVQPGEQF-GAAISVLDD 704
            F   +   D FG  V+ +   GDLD + N + +AVGA  D   +   GAV+IL +   G ++I++ KI    G           FG A+  LGDLD DG  D+AVGA        + G ++ILF+   GSV  + KI  SD  G                 L   D FG S+ +I DL+GDG+ DL VGA  D+D       GG  R      GA+YILF+   GTVK ++KIS  +G+        D FG  VA +G  +G  V+   VGA F D   +++GAVYLL +   G V  ++ +S         SA S     +A L   D FG +VAAM D D DG  DL+VG+   +      GA++V Y+      +  +++++   G    V     + G ++++LDD
Sbjct:   77 FTAVLDNTDLFGGEVASI---GDLDGDGN-VDLAVGAAVDDDGIASGGAVYILFMQTDG-SVISFQKISDTAGSFTATFGSTHYFGGAITELGDLDGDGVQDLAVGASGDNDGGSDRGAIFILFMQTDGSVNSFQKI--SDTAGS------------FTAVLENSDRFGASVDSIGDLDGDGIGDLAVGAYADSD-------GGSSR------GAVYILFLEERGTVKSYQKISDTAGSFTATLDNSDEFGGDVAAMGDLDGDGVVDLVVGASFDDDGANDIGAVYLLNMQTNGSVSSYQKISY--------SAGS----FTADLGLSDRFGVSVAAMGDHDGDGNLDLVVGAFLDDDGGDARGAAYVLYLQ-TDQTVKSFQKISDTVGGFTAVLDNTDYLGGSVTLLDD 441          
BLAST of NO13G00460 vs. NCBI_GenBank
Match: PCH99135.1 (hypothetical protein COB85_00675, partial [Bacteroidetes bacterium])

HSP 1 Score: 167.5 bits (423), Expect = 1.500e-37
Identity = 147/453 (32.45%), Postives = 217/453 (47.90%), Query Frame = 0
Query:  293 KRIGAMNVDFNLPISPGDRFGSSVSVLLPAGDLDRNWNTLKVAVGAPGDHTYMKRQGAVFILSLANFGTTLINYHKIIPGEGVLAGQACKYSSFGTAVATLGDLDTDGFSDIAVGAPFQE----ETGVVYILFLAFGGSVAKYIKIGG-SDKFGGAVXXXXXXXXXXXXXXLAIGDEFGCSIANIEDLNGDGVADLVVGACGDTDSRKGFAPGGKGREACIASGAIYILFMNIDGTVKYHRKISARSGNLLVGPQPGDRFGASVAFVGHRNGCTV--IAVGAPFADGAGHEVGAVYLLELLQTGDVKRFEILSSAYVPAPPGSARSPYIYMSAPLASHDYFGSAVAAM-DVDRDGGWDLLVGSRGLNQRTQDEGASFVCYMDGVRGGLTGWEQVASQSGVLVPVQPGEQFGAAISVLDDPSRNPSSLIFVGAPG---GCMDAVGGAVYVLRIQ 735
            ++I +   +F   ++  D FG+ +  +   GDLD +     +AVGA  D       GAV+IL + N   T+ +  KI   +G   G     S FGTA+A LGDL+ DG  DIAVGA   +    + G ++ILFL   GSV  + KI   +  FGG                L  GD+FG S+ +I DLNGD + DLVVGA  D D       GG  +      GA+++LF+N +GTV  H+K+S+  G        GD FG  VA +   NG  +  I VGA F DG G + GAV++L L   G VK  + +SS       G            L + D FG+ ++A+ D+D +G  D+L+ S   +    + GA  + Y+D     +   +   +Q      +   + F   ++ L D   +  + I VGA G   G  D   GAV++L ++
Sbjct:  825 QKISSTKGNFTGILADSDLFGADIENI---GDLDGD-GVDDLAVGAQYDDDGGSSNGAVWILFM-NSNGTVKSQQKISELQGNFTGTFSLASRFGTAIAPLGDLNNDGIFDIAVGARGDDDGGSDRGAIWILFLDTNGSVKSHQKISDLAGNFGG---------------ILDDGDQFGRSVTSIGDLNGDNIIDLVVGADKDDD-------GGTDK------GAVWVLFLNANGTVNSHQKVSSTQGAFTGALSNGDNFGTEVALINDVNGDNIPDIVVGASFDDGGGTDRGAVWILFLDTNGTVKTHQKISSTQGGYTGG------------LNNGDNFGAGISAINDLDGNGVDDILISSLYDDDGGPNRGAIRLLYLDNSGNVIAHMKISNTQGNFNGVLDDSDAFSYNLTSLGDLDGDGFTDIAVGAFGDDDGGTDR--GAVWILFLE 1230          
BLAST of NO13G00460 vs. NCBI_GenBank
Match: KJS05253.1 (hypothetical protein VR77_09135, partial [Flavobacteriales bacterium BRH_c54])

HSP 1 Score: 162.5 bits (410), Expect = 4.900e-36
Identity = 144/452 (31.86%), Postives = 219/452 (48.45%), Query Frame = 0
Query:  293 KRIGAMNVDFNLPISPGDRFGSSVSVLLPAGDLDRNWNTLKVAVGAPGDHTYMKRQGAVFILSLANFGTTLINYHKIIPGEGVLAGQACKYSSFGTAVATLGDLDTDGFSDIAVGAPFQEETGV----VYILFLAFGGSVAKYIKIGGSDKFGGAVXXXXXXXXXXXXXXLAIGDEFGCSIANIEDLNGDGVADLVVGACGDTDSRKGFAPGGKGREACIASGAIYILFMNIDGTVKYHRKISARSGNLLVGPQPGDRFGASVAFVGHRNGCTV--IAVGAPFADGAGHEVGAVYLLELLQTGDVKRFEILSSAYVPAPPGSARSPYIYMSAPLASHDYFGSAVAA-MDVDRDGGWDLLVGSRGLNQRTQDEGASFVCYMDGVRGGLTGWEQVASQSGVLVPVQPGEQF-GAAISVLDDPSRNPSSLIFVGA---PGGCMDAVGGAVYVLRI 734
            K   A        +   D++G     +   GDLD +     +AVGA  D      +GAV+I  L   G+  + Y KI   +G   G       FG+++  LGDLD DG +DIAVGA   ++ G     V+ILFL   G+V    KI  SD  GG                L  GD FG S++ I D++GDG+ DL+VGA  D         GG        +GA+++LF++ +GTVK+H+KI+  SG L V    GD FG S+  +G  +G  V  +AVGA   D      GAVY++ L  +G VK  + +S A      G+        +  +   D+FG+++    D ++DG  DLLVG+   +    + G  ++  M+   G +   + ++S S +L  +   + F G +IS++D  ++N ++ I + +     G  DA  GA YVL I
Sbjct:  460 KHSAATGEPLETELGASDKYGFGTCAI---GDLDGD-GINDMAVGAFLDDDGGANRGAVYIQFLNADGSIKL-YQKISDTQGGFTGTLADNCKFGSSLTNLGDLDGDGITDIAVGAYDDDDGGTTRGSVWILFLDTNGTVKSEQKI--SDTQGG------------FTGTLNNGDRFGISLSGINDIDGDGIQDLLVGARYDNS-------GGSN------TGAVWVLFLDTNGTVKWHQKIAQGSGGLTVTFDLGDMFGTSITSIGDMDGDGVPDMAVGAYADDDVETNTGAVYIINLTDSGKVKSEQKISMA-----SGN-------FNGFIEEADFFGASICGNYDFNQDGINDLLVGAIQNDNGGSNRGMYWMLMMNS-DGTVNYHKTISSTSNLLTSLIDNDDFLGRSISIIDYNTQNNTAKIVISSAEDDDGATDA--GAAYVLTI 864          
BLAST of NO13G00460 vs. NCBI_GenBank
Match: OVE82188.1 (hypothetical protein BVY03_01465 [bacterium K02(2017)])

HSP 1 Score: 162.5 bits (410), Expect = 4.900e-36
Identity = 140/440 (31.82%), Postives = 206/440 (46.82%), Query Frame = 0
Query:  302 FNLPISPGDRFGSSVSVLLPAGDLDRNWNTLKVAVGAPGDHTYMKRQGAVFILSLANFGTTLINYHKIIPGEGVLAGQACKYSSFGTAVATLGDLDTDGFSDIAVGAPFQEE----TGVVYILFLAFGGSVAKYIKIGGSDKFGGAVXXXXXXXXXXXXXXLAIGDEFGCSIANIEDLNGDGVADLVVGACGDTDSRKGFAPGGKGREACIASGAIYILFMNIDGTVKYHRKISARSGNLLVGPQPGDRFGASVAFVGHRNGCTV--IAVGAPFADGAGHEVGAVYLLELLQTGDVKRFEILSSAYVPAPPGSARSPYIYMSAPLASHDYFGSAVAAMDVDRDGGWDLLVGSRGLNQRTQDEGASFVCYMDGVRGGLTGWEQVASQSGVLVPV-QPGEQFGAAISVLDDPSRNPSSLIFVGAPGGCMDAVG-GAVYVLRI 734
            F   +   D FG ++S +   GDLD + +   + VGA  D      +GAV++L L + G T+ ++ KI    G           FG + A++GD+DTDG +DIAVGA F ++     G VYILFL   G+V+ + KI  SD  G                   + D FG S+A++ D+NGD V D+ VGA  D D       GG  R      GA+YI+F+N DGTVK  +KIS   G+        D FG SVA +   NG  +  +AVG+ + D  G E GAVY++ L   G V  F+ +S            +                      D D DG  DL+VG+   N    D GA +V Y++   G ++ +E+++   G    V    + FG + + + D   +  + I +GA G     +  GAV++L I
Sbjct:  426 FTAVLDNSDYFGVTISNI---GDLDGD-SINDLIVGAHQDDDGGADRGAVYVLFLESDG-TVSSFQKISDTAGSFTAVLDNTDYFGISAASIGDIDTDGINDIAVGAFFDDDGGTNKGAVYILFLENDGTVSSFQKI--SDTAGS------------FTASFTVTDLFGRSVASMGDVNGDSVPDIAVGAYYDDD-------GGTDR------GAVYIIFLNNDGTVKSFQKISDTEGSFTGVLDNTDYFGVSVASIKDLNGDGINELAVGSYYDDDGGSERGAVYVMFLNNNGTVSSFQKISD-----------TEXXXXXXXXXXXXXXXXXXXXXDFDGDGITDLMVGAHSDNDGGTDNGAIYVLYLN-ANGTVSSYEKISDTEGGFTGVLDNSDYFGISAANIADLDGDGVTDIAIGAYGDADGGLNRGAVHILNI 821          
BLAST of NO13G00460 vs. NCBI_GenBank
Match: OVE81302.1 (hypothetical protein BVY03_04185, partial [bacterium K02(2017)])

HSP 1 Score: 159.8 bits (403), Expect = 3.100e-35
Identity = 153/475 (32.21%), Postives = 226/475 (47.58%), Query Frame = 0
Query:  270 ASPAVLSMPRAGLAIMRVVFVAFKRIGAMNVDFNLPISPGDRFGSSVSVLLPAGDLDRNWNTLKVAVGAPGDHTYMKRQGAVFILSLANFGTTLINYHKIIPGEGVLAGQACKYSSFGTAVATLGDLDTDGFSDIAVGAPFQE---ETGVVYILFLAFGGSVAKYIKIGGSDKFGGAVXXXXXXXXXXXXXXLAIGDEFGCSIANIEDLNGDGVADLVVGACGDTDSRKGFAPGGKGREACIASGAIYILFMNIDGTVKYHRKISARSGNLLVGPQPGDRFGASVAFVGHRNGCTV--IAVGAPFADGAGHEVGAVYLLELLQTGDVKRFEILSSAYVPAPPGSARSPYIYMSAPLASHDYFGSAVAAM-DVDRDGGWDLLVGSRGLNQRTQDEGASFVCYMDGVRGGLTGWEQVASQSGVL-VPVQPGEQFGAAISVLDDPSRNPSSLIFVGA----PGGCMDAVGGAVYVLRI 734
            AS  V+         +R     +++I     +F   +   D FG++V+ +   GDLD +     + VGA  D      +GAV+IL L N   T+ +  KI    G           +G A+ +LGD+D+DG +DIAVGA   +   + G VYILFL   G+V+   KI  SD  G                 L   DEFG ++A I DL+GDG+ DL VGA  D D       GG  R      GAIY+LF+N DGTV   +KIS  +G         D FG +V+ +G  +G  V  +AVGA   D  G + GAVY+L +   G V  F+ +S        G         +A L + DYFG+ + AM D+D +G  DL V +   +    D GA ++ Y+    G +  + +++  SG L + ++  ++FG +IS  +D + + +  I VG      GG      GAVY+  +
Sbjct:  141 ASDGVIDTGTGNAVTVRAAISNYQKISDTAGNFTGVLDNSDVFGAAVAGI---GDLDGD-GINDILVGAQADDDGGTDRGAVYILFL-NTDGTVSSEQKISDTAGGFTTAIDNDEWWGRAITSLGDVDSDGINDIAVGAYDADGGTDRGAVYILFLNTDGTVSSEQKI--SDTIG------------EFTGVLDNFDEFGIALAGIGDLDGDGINDLAVGALSDDD-------GGSAR------GAIYVLFLNTDGTVSSEQKISDTTGGFTGVLDNNDWFGRTVSKLGDLDGDGVPDLAVGAYNDDDGGADRGAVYVLFMNTGGTVNSFQKISDTV-----GG-------FTAVLDNTDYFGAGLTAMDDLDGNGARDLAVTAYLDDDGGADRGAVYILYLT-TFGTVDSYSKLSETSGGLGISLENTDRFGFSISNTNDINEDGNQDIAVGTFWDDDGG---TNRGAVYIFNL 567          
BLAST of NO13G00460 vs. NCBI_GenBank
Match: OGY64401.1 (hypothetical protein A3B92_02630 [Candidatus Harrisonbacteria bacterium RIFCSPHIGHO2_02_FULL_42_16])

HSP 1 Score: 159.5 bits (402), Expect = 4.100e-35
Identity = 137/393 (34.86%), Postives = 195/393 (49.62%), Query Frame = 0
Query:  356 LANFGTTLINYHKIIPGEGVLAGQACKYSSFGTAVATLGDLDTDGFSDIAVGAPFQE----ETGVVYILFLAFGGSVAKYIKIGGSDKFGGAVXXXXXXXXXXXXXXLAIGDEFGCSIANIEDLNGDGVADLVVGACGDTDSRKGFAPGGKGREACIASGAIYILFMNIDGTVKYHRKISARSGNLLVGPQPGDRFGASVAFVG--HRNGCTVIAVGAPFADGAGHEVGAVYLLELLQTGDVKRFEILSSAYVPAPPGSARSPYIYMSAPLASHDYFGSAVAAM-DVDRDGGWDLLVGSRGLNQRTQDEGASFVCYMDGVRGGLTGWEQVASQSGVL-VPVQPGEQFGAAISVLDDPSRNPSSLIFVGA---PGGCMDAVGGAVYVLRIQPIG 738
            L++ GT   N  KI    G          +FG +VA +GDLD DG +D+  GA   +    + G +Y+LF+   G+V  + K   S+ FGG                LA  DEFG S+A I DLNGDGV DL VGA  D D   G A G          GA+YILFMN  GTVK  +KIS+ +G+L V     D FG S+A +G    +G T IAVGA   D    + GAVY+L +   G VK  + +SS       G        +   + + D FG  +A++ D+D DG  DL+VG+   +    D GA+++ +M+   G +   ++++S +G     +   + FG +++ L D   +    I VGA     G  D  GGAVY+L + P G
Sbjct:  902 LSSDGTVKSN-QKISDTAGSFTATLDINDNFGMSVANIGDLDGDGVTDLVAGAHKDDDGFTDRGAIYVLFMNPAGTVKSFQKT--SNSFGG--------------YTLANNDEFGVSVAAIGDLNGDGVTDLAVGAHADND---GNADG----------GAVYILFMNPAGTVKSAQKISSTAGSLGVTMDTSDNFGQSIANIGDLDGDGVTDIAVGAFVDDDGNTDGGAVYILFMNPDGTVKSNQKISST-----AGG-------LGVTMDTDDQFGQDIASLGDLDGDGVTDLVVGAHQDDDGNTDGGAAYILFMN-PDGTVKSNQKISSTAGNFGTTLVATDSFGYSVASLGDLDGDSVKDIVVGARLDNDGNTD--GGAVYILFMNPNG 1249          
The following BLAST results are available for this feature:
BLAST of NO13G00460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ODC00645.12.300e-4132.60hypothetical protein A3197_10040 [Candidatus Thiod... [more]
WP_069025031.12.900e-4133.04hypothetical protein [Candidatus Thiodiazotropha e... [more]
WP_069006236.15.000e-4133.04hypothetical protein [Candidatus Thiodiazotropha e... [more]
WP_108279313.12.300e-3832.74hypothetical protein [gamma proteobacterium symbio... [more]
OVE82713.16.800e-3833.90hypothetical protein BVY03_00245, partial [bacteri... [more]
PCH99135.11.500e-3732.45hypothetical protein COB85_00675, partial [Bactero... [more]
KJS05253.14.900e-3631.86hypothetical protein VR77_09135, partial [Flavobac... [more]
OVE82188.14.900e-3631.82hypothetical protein BVY03_01465 [bacterium K02(20... [more]
OVE81302.13.100e-3532.21hypothetical protein BVY03_04185, partial [bacteri... [more]
OGY64401.14.100e-3534.86hypothetical protein A3B92_02630 [Candidatus Harri... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR057ngnoR057Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001864NSK001864Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G00460.1NO13G00460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|557964gene_6971Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G00460.1NO13G00460.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G00460 ID=NO13G00460|Name=NO13G00460|organism=Nannochloropsis oceanica|type=gene|length=3260bp
CTTTCAGCATCAGGCCGCCAACGGCTAAACAAAATCAAAGGAGTAGATAG
GTGTATTCTACTCTTCTCCCTCTCTCCAGCAAGAAATATGTTTGCTTGTC
TCTGGCTGGCTTGCTTCTTTCTCTTATCCTGGATCAAAGTGGACATAAAT
GAATATGTTTGTGCGATGGGTGTTTTCATATTCAAATAATAAAGACATTT
ACAAGTTTTTTTTTCCAACTTGCTCGGTCTCGGGGGGAGGAAGAACCGCA
AGTAACGGTGGCTGAGCCGTTAACCTCCTCCTTGTGTGCGTGTTGGTCGA
CTTTCGAGCCACACACGCTCCAATTTCAAACAACACATCTTGCACTGGAA
TCGCTTCTCTTTGAAACATGACACGAATCTCAATTACTTAAACTAACCCG
ATCTTATCCACACACAGTAACTCAAGCCTCCGGGTCAATGCTGAGCCTCT
CTCCTCCAACACGTCGGGGCTGGTGTGCTGCCGCTCCACCGCCTTTCCAC
CGCTTCCTCGCAATCGTTCTCCTGTGCTTCTCATATCAAACCTTGGCTAT
AGATCTTTATCTTGATGGCAGGGGCAATATGCGTAGGTCTGTCCATCCAA
CCTCGCTGCAACCAATACCCGAGGAAAACAACAAGGCTGGGAACCCCGTG
CCAGCTGACCTTATGCCCTTCGGCTCCTCCATCAACGACGAGGAGTTGGG
CGCTCTAATCCATGTGAATCAACCTGTTGATGGGAAAGATACTGCTATGC
CACCGCCTCCTATTGCGTCGCAGCCTCATCCTACCGAGCTTTCTGAGACC
GAGGCCTTGAAGCTGAAGCAGGAACTTTACGCCAAGGACATGCAACGCGG
GACTATCTTCGACATGGAGGACGCACCGGACGATATTTTGGAAGAGGCAC
CGAAAAGCGTGAAATCAATGGCAGCCATTGAAAAGCCCCTGTATACGACG
CATTCGAAAAGTGAAACAATGACGGACGCTGAAGCAAAGACGTCAGCCTC
TTCCACGGAATCCTCCCCAAGTACTGGTGCGAGTGATATAGAACTATCAG
TAGAATTGGCGGCGGCAGAGATATATGGAGATGATCTTATTATAACTGCA
ATGCGTTCGGGTGCAGGCGTTGCCGGTGGTCGGCCTGGCGGCAATGTCCA
GGCCATTCGGAGTGCCGCGTTAGCAGCGACGGCCCTGGCTCGTCAAGGTG
TCGCGGCAGCGCAACGGAAAGCGGGTGTGGGTGCCGGTGCCATTGCATCA
CCCGCTGTTCTTAGCATGCCACGCGCTGGTCTGGCCATTATGCGTGTTGT
GTTTGTGGCCTTCAAGCGCATTGGGGCCATGAATGTGGATTTTAATTTGC
CCATCTCTCCCGGGGATCGCTTTGGGTCTTCCGTGTCGGTGCTGTTGCCG
GCCGGGGATTTGGACCGCAACTGGAACACACTGAAGGTAGCGGTGGGTGC
CCCAGGTGATCACACGTACATGAAGCGACAGGGAGCGGTATTTATCCTGT
CGCTCGCCAATTTTGGAACTACGCTGATCAACTATCATAAGATTATTCCC
GGGGAAGGCGTCCTGGCGGGACAGGCTTGCAAGTACTCGAGCTTTGGCAC
GGCAGTGGCAACCCTAGGCGACTTGGACACTGATGGATTTTCGGACATTG
CTGTGGGCGCCCCGTTTCAGGAAGAGACGGGAGTGGTCTATATTTTGTTC
TTGGCCTTTGGGGGCTCGGTCGCAAAGTACATAAAGATCGGTGGTAGTGA
CAAATTCGGGGGAGCTGTGTGGGGAAATCCGCATTTTGGAAATCCGCATT
ATCCGTCGCCCTTGGCCATTGGGGATGAATTTGGCTGCTCTATCGCCAAC
ATTGAGGATCTGAACGGGGATGGCGTGGCAGACTTGGTCGTGGGTGCCTG
TGGAGACACGGACTCGAGAAAAGGGTTTGCCCCCGGCGGCAAGGGACGCG
AGGCCTGCATAGCCTCAGGTGCCATTTACATTCTATTTATGAATATCGAT
GGTACGGTCAAATACCACCGCAAGATCAGCGCGCGTAGCGGGAATCTGCT
GGTAGGGCCGCAGCCAGGGGATCGTTTTGGGGCATCAGTGGCGTTCGTCG
GGCACCGCAATGGATGCACCGTGATCGCGGTGGGCGCACCCTTCGCGGAC
GGTGCAGGTCACGAGGTTGGGGCCGTGTATCTTTTGGAGCTACTGCAAAC
GGGTGACGTGAAACGATTCGAGATTCTGAGTTCTGCCTATGTACCTGCCC
CCCCAGGTTCGGCCCGGTCGCCGTACATATATATGAGTGCGCCTTTGGCC
TCACACGACTACTTCGGTAGCGCTGTGGCAGCCATGGACGTGGACAGAGA
CGGAGGCTGGGACTTGTTGGTCGGATCGCGGGGCCTGAATCAGCGTACGC
AGGATGAAGGGGCCTCATTTGTGTGCTATATGGATGGGGTTCGAGGGGGG
TTGACGGGGTGGGAGCAGGTAGCGAGCCAGAGTGGCGTTTTGGTACCCGT
GCAACCAGGGGAGCAGTTTGGAGCCGCAATTTCCGTTTTAGATGATCCCA
GCCGCAACCCTTCTAGCTTAATCTTTGTAGGTGCGCCCGGTGGGTGTATG
GATGCAGTGGGTGGGGCGGTGTACGTGCTACGGATCCAGCCCATTGGAGG
GTAGATTTGTAGGGGACGGTGGGAGTATAGGGCGTATGAGCTGGAAAAAT
ATGGGCTGGGAGGTAAGAAGGATAAGACAAATGAGAGGAGGGAAAATAGA
AAAGAATAAAGAATGAATTCTACTGCGTGCACGGGATTAAACTTTTCCTT
ATAAATGCCTACTTTTTCAAAATCTCAATGCTGAGAGCGAAGCGAAGGGA
GTGACGAATCATTTGTTACGCGAATTACATTTGTCAATATTATGACCATT
TTTGCTACAGGAGAGTATTATTGGGTAAAGATATATGGAAGGAAAATGAT
TTCGTGTGTATGTCATTCTTGTGAGAATTTTTCGTTTTACTGTGTTGTCC
TCCCCGCTCTTCCTTCGCGCAGTCGTGCGCGATGATGATGAATTGAAATA
CCTTCAGGCCTCACTGTCCCCTCTCCCACCCAGTTGCAACAGCAATCTGT
CTATAGACAGAACAAAAAAGCCATCACTATATAGCGAACCAACGCCGAGT
TTCAACACTCCCCACCTCTATTATCGCGGAAACGGACTGCGCCAAAAGTG
GGCGAGAGACGACGAGCGCCATCATGGTCTCCTCTTCTCACTCTACAACC
CCATGCACAT
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protein sequence of NO13G00460.1

>NO13G00460.1-protein ID=NO13G00460.1-protein|Name=NO13G00460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=739bp
MLSLSPPTRRGWCAAAPPPFHRFLAIVLLCFSYQTLAIDLYLDGRGNMRR
SVHPTSLQPIPEENNKAGNPVPADLMPFGSSINDEELGALIHVNQPVDGK
DTAMPPPPIASQPHPTELSETEALKLKQELYAKDMQRGTIFDMEDAPDDI
LEEAPKSVKSMAAIEKPLYTTHSKSETMTDAEAKTSASSTESSPSTGASD
IELSVELAAAEIYGDDLIITAMRSGAGVAGGRPGGNVQAIRSAALAATAL
ARQGVAAAQRKAGVGAGAIASPAVLSMPRAGLAIMRVVFVAFKRIGAMNV
DFNLPISPGDRFGSSVSVLLPAGDLDRNWNTLKVAVGAPGDHTYMKRQGA
VFILSLANFGTTLINYHKIIPGEGVLAGQACKYSSFGTAVATLGDLDTDG
FSDIAVGAPFQEETGVVYILFLAFGGSVAKYIKIGGSDKFGGAVWGNPHF
GNPHYPSPLAIGDEFGCSIANIEDLNGDGVADLVVGACGDTDSRKGFAPG
GKGREACIASGAIYILFMNIDGTVKYHRKISARSGNLLVGPQPGDRFGAS
VAFVGHRNGCTVIAVGAPFADGAGHEVGAVYLLELLQTGDVKRFEILSSA
YVPAPPGSARSPYIYMSAPLASHDYFGSAVAAMDVDRDGGWDLLVGSRGL
NQRTQDEGASFVCYMDGVRGGLTGWEQVASQSGVLVPVQPGEQFGAAISV
LDDPSRNPSSLIFVGAPGGCMDAVGGAVYVLRIQPIGG*
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Synonyms
Publications