NO13G00260, NO13G00260 (gene) Nannochloropsis oceanica

Overview
NameNO13G00260
Unique NameNO13G00260
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3931
Alignment locationchr13:96744..100674 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:96744..100674 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO13G00260 vs. NCBI_GenBank
Match: EWM22838.1 (hypothetical protein Naga_100295g2 [Nannochloropsis gaditana])

HSP 1 Score: 408.3 bits (1048), Expect = 2.500e-110
Identity = 210/353 (59.49%), Postives = 258/353 (73.09%), Query Frame = 0
Query:    7 SLRSTVRQRFANLTEQYPTGMVR-ARSASKTLGTCLTIVMAVVYMSMIYLVVGRVSSPSLSLLNATTSTSYSTNLRGASXXXXXPSLSKFRNNPLPSLPNSAALTHLIVVAGHAVTITESLEGVEEEDHVWYLLPYQKAQDLPATFVAHIKAGVSLAQRDPASLLVFSGGQTRVDAGPWSEGAAYYRVAEHFGWWDPASDPSPEVKGRALAEEYALDSFENLLYSICRFKEYTGHYPTRITVVSFAFKRARFLSHHRGALRFPEAQFEYMGLDPPPEGRFDRKKAVEGEYHDALKLFESDPYGCHSKTLQEKRASRNPFRRTAPYALACPEIAPLLEYCQRTIYPHALPWDAH 359
            S+ S  + R    T++   G +R   +A     T + I MAV+Y+  I L+ GR   PS S    T +   S+  RG+S           RN+   +   + +L HLI+VAGHAVTI+ESLEG E +D VWYLLPYQ+ QDLPATFV+HI+ GV LA+RDPASLL+FSGGQTR +AGP SEG++YYRVAEHFGWWD AS PS +VK RAL E+YALDS ENLLYSICRFKEYT HYPTRI+VVSFAFK+ RF  HHR ALRFP+++F ++G+DPP  G+FD KKA +GE ++A+KLFESDPYGC+SK LQEK A RNPF RT PY  +CPE+APLLEYC+ TIYP  LPWD+H
Sbjct:   20 SVLSDFKGRDIQETQERNYGAMRYTMNAKGCRATRIAIAMAVLYLYSIVLLKGRRFMPS-SSSPPTPTLGLSSRPRGSSASLRSSYSGSLRNSFHRNSRGTESLNHLIMVAGHAVTISESLEGAETDDAVWYLLPYQRDQDLPATFVSHIRTGVELAKRDPASLLIFSGGQTRAEAGPRSEGSSYYRVAEHFGWWDSASSPS-DVKKRALTEDYALDSIENLLYSICRFKEYTDHYPTRISVVSFAFKQKRFRFHHRAALRFPDSRFAFVGVDPPIGGKFDHKKAEKGELNEAVKLFESDPYGCNSKKLQEKHAERNPFMRTMPYTFSCPEVAPLLEYCESTIYPDPLPWDSH 370          
BLAST of NO13G00260 vs. NCBI_GenBank
Match: OLP92244.1 (Uncharacterized protein C57A10.07 [Symbiodinium microadriaticum])

HSP 1 Score: 284.6 bits (727), Expect = 4.100e-73
Identity = 144/291 (49.48%), Postives = 184/291 (63.23%), Query Frame = 0
Query:  109 LTHLIVVAGHAVTITESLEGVEEEDHVWYLLPYQKAQDLPATFVAHIKAGVSLAQRDPASLLVFSGGQTRVDAGPWSEGAAYYRVAEHFGWWDPASDPSP----------------EVKGRALAEEYALDSFENLLYSICRFKEYTGHYPTRITVVSFAFK----------------------------RARFLSHHRGALRFPEAQFEYMGLDPPPEGRFDRKKAVEGEYHDALKLFESDPYGCHSKTLQEKRASRNPFRRTAPYALACPEIAPLLEYCQRTIYPHALPW 356
            L+HL++VAGHAV + +SLE +  ++  W+L  YQ+ QDLP   V+HIKAGV  A  DP +LL+FSGGQTR  AGP +EG +YYRVAE+F WW  +++                    V  RA+ EE+ALDSF+N+L+S+CRFKE  G YP R+T+VSF FK                            R RF   HRGALRFP A+F Y+G+ PPP  RFD  KA  GE H+A KLF+SDPYGCHS+TL EKR +RNPF+RT PY L+CPE+  LL++C   I+  ALPW
Sbjct:   92 LSHLVMVAGHAVVMADSLEHIVHKESDWFLEAYQRGQDLPQALVSHIKAGVEAAALDPRALLIFSGGQTRAAAGPRNEGWSYYRVAEYFDWWGYSANRPDLLREAQQRTQRTSTFLPVAQRAVTEEFALDSFQNVLFSLCRFKEVVGRYPDRVTIVSFTFKKPPAIALRLGLGACYGLLPNEGFLTSPPRQRFSELHRGALRFPSARFSYIGIQPPPGSRFDVVKAESGE-HEAAKLFQSDPYGCHSQTLVEKRRARNPFQRTTPYLLSCPELKALLQWCGPDIFRGALPW 381          
BLAST of NO13G00260 vs. NCBI_GenBank
Match: GAX20826.1 (hypothetical protein FisN_7Hh140 [Fistulifera solaris])

HSP 1 Score: 275.0 bits (702), Expect = 3.300e-70
Identity = 130/252 (51.59%), Postives = 179/252 (71.03%), Query Frame = 0
Query:  106 SAALTHLIVVAGHAVTITESLEGVEEEDHVWYLLPYQKAQDLPATFVAHIKAGVSLAQRDPASLLVFSGGQTRVDAGPWSEGAAYYRVAEHFGWWDPASDPSPE-VKGRALAEEYALDSFENLLYSICRFKEYTGHYPTRITVVSFAFKRARFLSHHRGALRFPEAQFEYMGLDPPPEGRFDRKKAVEGEYHDALKLFESDPYGCHSKTLQEKRASRNPFRRTAPYALACPEIAPLLEYCQRTIYP-HALPW 356
            ++A  +LI+VAGH+VTI+  LE   ++++ W+LL YQ+ + LP   V HI+AG++ AQ+DP SLLVFSGG+TR   GP +EGA+YYRV +    W     PSP  V+ R + E++A DSFENL++SICRF+E TG YP  ITVVSF+FK+ RF + H  ALR+P  +F+Y+G+DPP    F  ++A +GE  +++K F+SDPYGCHSK LQEKR  RNPF RT PY L+CPE++ LL +C   + P   +PW
Sbjct:   76 ASAAKNLIIVAGHSVTISGHLEDANQDENDWFLLDYQRHRGLPEAIVGHIRAGIAAAQKDPTSLLVFSGGETRAATGPETEGASYYRVTDAMQLW-----PSPSTVRARTITEDFATDSFENLMFSICRFREVTGSYPNTITVVSFSFKQTRFQTMHAKALRWPPNRFQYIGVDPPASTGFKLEEATKGELENSVKPFQSDPYGCHSKILQEKRKQRNPFSRTPPYTLSCPEMSDLLRFCGSDLIPLDKVPW 322          
BLAST of NO13G00260 vs. NCBI_GenBank
Match: XP_002178493.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50158.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 269.6 bits (688), Expect = 1.400e-68
Identity = 130/251 (51.79%), Postives = 171/251 (68.13%), Query Frame = 0
Query:  106 SAALTHLIVVAGHAVTITESLEGVEEEDHVWYLLPYQKAQDLPATFVAHIKAGVSLAQRDPASLLVFSGGQTRVDAGPWSEGAAYYRVAEHFGWWDPASDPSPEVKGRALAEEYALDSFENLLYSICRFKEYTGHYPTRITVVSFAFKRARFLSHHRGALRFPEAQFEYMGLDPPPEGRFDRKKAVEGEYHDALKLFESDPYGCHSKTLQEKRASRNPFRRTAPYALACPEIAPLLEYCQRTIYPHA-LPW 356
            +A   HLI+VAGH+V I+  LE    ++  WYLLPYQK + LPA  V HI  G++ A+ D  SLL+FSGG+TR   GP +EGA+YYRVA+    W   S     V+ R ++EE+A DSFENL++SICRF+E TG YP ++TVVSF FK+ RF   H  AL++P+  F Y+G+DP     F+ ++AV GE  +A K FE DPYGCHS+ LQEKR SRNPF+RT PY L+CP++  LL YC   I P + +PW
Sbjct:   15 AANAKHLIIVAGHSVAISGHLEDAGRDETDWYLLPYQKNRGLPAAIVGHINTGLNAAEEDEQSLLIFSGGETRASTGPETEGASYYRVADAMNLWPENS----SVRARTISEEFATDSFENLMFSICRFQEITGSYPEKVTVVSFTFKKRRFEELHAQALQWPKQSFSYIGVDPEANTGFNLQEAVVGELENAAKPFEIDPYGCHSQVLQEKRRSRNPFKRTPPYELSCPDMKELLSYCGPAIIPKSKVPW 261          
BLAST of NO13G00260 vs. NCBI_GenBank
Match: GAX11759.1 (hypothetical protein FisN_7Lh140 [Fistulifera solaris])

HSP 1 Score: 267.7 bits (683), Expect = 5.200e-68
Identity = 126/251 (50.20%), Postives = 177/251 (70.52%), Query Frame = 0
Query:  106 SAALTHLIVVAGHAVTITESLEGVEEEDHVWYLLPYQKAQDLPATFVAHIKAGVSLAQRDPASLLVFSGGQTRVDAGPWSEGAAYYRVAEHFGWWDPASDPSPEVKGRALAEEYALDSFENLLYSICRFKEYTGHYPTRITVVSFAFKRARFLSHHRGALRFPEAQFEYMGLDPPPEGRFDRKKAVEGEYHDALKLFESDPYGCHSKTLQEKRASRNPFRRTAPYALACPEIAPLLEYCQRTIYP-HALPW 356
            +++  +LI+VAGH+VTI+  LE   ++++ W+LL YQ+ + LP   V HI+AG++ AQ+DP SLLVFSGG+TR   GP +EGA+YYRV +    W   S     V+ R + E++A DSFENL++SICRF+E TG YP  ITVVSF+FK+ RF + H  ALR+P  +F+Y+G+DP     F  ++A++GE  +++K F+SDPYGCHSK LQEKR  RNPF RT PY L+CPE++ LL +C   + P   +PW
Sbjct:   76 ASSAKNLIIVAGHSVTISGHLEDANQDENDWFLLDYQRHRGLPEAIVGHIRAGIAAAQKDPTSLLVFSGGETRAATGPETEGASYYRVTDAMQLWPSQS----TVRARTITEDFATDSFENLMFSICRFREVTGSYPDTITVVSFSFKQTRFQTMHAKALRWPPNRFQYIGVDPSASTGFVLEEAMKGELENSVKPFQSDPYGCHSKILQEKRKQRNPFSRTPPYTLSCPEMSDLLRFCGSDLIPLDKVPW 322          
BLAST of NO13G00260 vs. NCBI_GenBank
Match: CBJ30413.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 262.3 bits (669), Expect = 2.200e-66
Identity = 129/251 (51.39%), Postives = 167/251 (66.53%), Query Frame = 0
Query:  106 SAALTHLIVVAGHAVTITESLEGVEEEDHVWYLLPYQKAQDLPATFVAHIKAGVSLAQRDPASLLVFSGGQTRVDAGPWSEGAAYYRVAEHFGWWDPASDPSPEVKGRALAEEYALDSFENLLYSICRFKEYTGHYPTRITVVSFAFKRARFLSHHRGALRFPEAQFEYMGLDPPPEGRFDRKKAVEGEYHDALKLFESDPYGCH-SKTLQEKRASRNPFRRTAPYALACPEIAPLLEYCQRTIYPHALPW 356
            S  LTHLI+V  H VT+TESLEG +  D  W+LL YQK +D+P   V HI+ G+     D  +LL+FSGG+TR  AGP SEG +Y+ VA+H+ WW       P+++ RA  E++A DSFEN+L+SICRFKE TG YPT+ITVV F FK  RF   H  +LRFP   F Y+GL   PEGRFD   A EGE   AL+ + SDPYGC    TL +KR +R+PF RT PY++ CPE++ LL +C+  ++   LPW
Sbjct:  120 SKELTHLIMVPCHGVTVTESLEGADSRDGDWFLLDYQKGKDVPRALVGHIQGGLDALDADENALLLFSGGKTRGPAGPKSEGESYFFVADHYDWWG-----KPDLRARASTEDFARDSFENVLFSICRFKEITGDYPTKITVVGFDFKEDRFEHLHMPSLRFPPEAFRYVGLH--PEGRFDHAAAAEGERTSALEPYRSDPYGCAVGGTLVQKRHARDPFHRTPPYSMVCPEMSELLGWCETELFTGDLPW 363          
BLAST of NO13G00260 vs. NCBI_GenBank
Match: OEU10241.1 (hypothetical protein FRACYDRAFT_151991, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 257.7 bits (657), Expect = 5.400e-65
Identity = 124/246 (50.41%), Postives = 166/246 (67.48%), Query Frame = 0
Query:  111 HLIVVAGHAVTITESLEGVEEEDHVWYLLPYQKAQDLPATFVAHIKAGVSLAQRDPASLLVFSGGQTRVDAGPWSEGAAYYRVAEHFGWWDPASDPSPEVKGRALAEEYALDSFENLLYSICRFKEYTGHYPTRITVVSFAFKRARFLSHHRGALRFPEAQFEYMGLDPPPEGRFDRKKAVEGEYHDALKLFESDPYGCHSKTLQEKRASRNPFRRTAPYALACPEIAPLLEYC-QRTIYPHALPW 356
            +L++VAGH+VT++  L+    ++  W+LL YQK Q LP    AHI AG+  A++DP SLLVFSGG+TR  +GP +E  AYY VA+    W   ++    V+ R   EE+A DSFENL++SICRF+E TG YP +ITVVSF+FKR RF + H  ALR+P  +F Y+G+DPP    FD +++ EGE  +A   F  DPYGCH+  LQEKR SRNPF+RT PY L+CPE+  LL++C    I    +PW
Sbjct:    1 NLVMVAGHSVTVSGHLQDAGSDESDWFLLGYQKGQGLPQAIHAHITAGIEEARKDPKSLLVFSGGETRAISGPQTEAQAYYHVADAMNLW--LTNDGSSVRARTTTEEFATDSFENLMFSICRFREITGEYPKKITVVSFSFKRRRFETLHAPALRWPADRFAYIGVDPPASTGFDLQRSTEGESKNAAAPFAQDPYGCHTAVLQEKRNSRNPFQRTPPYGLSCPEMKELLQFCGPEFISVQLIPW 244          
BLAST of NO13G00260 vs. NCBI_GenBank
Match: EJK44735.1 (hypothetical protein THAOC_36702, partial [Thalassiosira oceanica])

HSP 1 Score: 256.9 bits (655), Expect = 9.200e-65
Identity = 131/263 (49.81%), Postives = 171/263 (65.02%), Query Frame = 0
Query:  105 NSAALTHLIVVAGHAVTITESLEGVEEEDHVWYLLPYQKAQDLPATFVAHIKAGVSLAQRDPASLLVFSGGQTRVDAGPWSEGAAYYRVAEHFGWWD------PAS-----DPSPEVKGRALAEEYALDSFENLLYSICRFKEYTGHYPTRITVVSFAFKRARFLSHHRGALRFPEAQFEYMGLDPPPEGRFDRKKAVEGEYHDALKLFESDPYGCHSKTLQEKRASRNPFRRTAPYALACPEIAPLLEYC-QRTIYPHALPW 356
            ++A  THLI+VAGH+V I+  +E    ++ VW+LL YQK   LP + + HI+AG+ LA  DP SLLVFSGGQTR   GP SEG++YYRVA+    WD      P+S     +    V+ R   EE+ALDSF+NLL+SICRF E TG YP R++++SF FK+ RF + H  AL  PE  F ++G+DPPP   FD K++ EGE  ++L  F  DPYGCHS+ LQ KR  RNPF RT PY L CPE+  LL++C    I    +PW
Sbjct:    5 SAAKATHLIIVAGHSVLISGDVENAATDESVWWLLDYQKNHGLPQSILGHIQAGIQLAMEDPDSLLVFSGGQTRGQTGPESEGSSYYRVADALHLWDGRKAFPPSSIRRQANQQSTVRARTTTEEFALDSFQNLLFSICRFHEVTGSYPDRVSMISFTFKQERFETLHAQALLLPE--FVFVGVDPPPSTGFDLKQSSEGERINSLLPFRIDPYGCHSEVLQRKRKERNPFSRTPPYELTCPEMKDLLKWCGPEIIEKSKVPW 265          
BLAST of NO13G00260 vs. NCBI_GenBank
Match: XP_002290220.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED91972.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 256.5 bits (654), Expect = 1.200e-64
Identity = 123/247 (49.80%), Postives = 167/247 (67.61%), Query Frame = 0
Query:  110 THLIVVAGHAVTITESLEGVEEEDHVWYLLPYQKAQDLPATFVAHIKAGVSLAQRDPASLLVFSGGQTRVDAGPWSEGAAYYRVAEHFGWWDPASDPSPEVKGRALAEEYALDSFENLLYSICRFKEYTGHYPTRITVVSFAFKRARFLSHHRGALRFPEAQFEYMGLDPPPEGRFDRKKAVEGEYHDALKLFESDPYGCHSKTLQEKRASRNPFRRTAPYALACPEIAPLLEYCQRTIYPHA-LPW 356
            THLI+VAGH+V ++  ++    ++ VW+LL YQ+ + LP   V+HI+AG+ LA  D  SLLVFSGG+TR   GP +EG +Y+R         P+      V+ R + EEYA DSFENLL+SICRF + TG YP +IT+VSF+FK+ RF S H GAL++P A+F+Y+G+DPP    FD  ++ EGE  ++L  F SDPYGCH++ LQ+KR  RNPF RT PY L CPE+  LL +C   + P A +PW
Sbjct:    1 THLIIVAGHSVLVSGDVDKAAFDESVWFLLDYQRNRGLPQAIVSHIQAGIQLALEDDKSLLVFSGGETRARTGPETEGGSYFRAG-------PSIHKQSTVRARTITEEYATDSFENLLFSICRFHDVTGSYPEKITIVSFSFKQERFESLHAGALQWPIARFDYVGVDPPSSTGFDLNESSEGEKRNSLVPFTSDPYGCHTELLQQKRKERNPFARTPPYDLTCPEMKELLHWCGPELIPKASVPW 240          
BLAST of NO13G00260 vs. NCBI_GenBank
Match: GBG28515.1 (Hypothetical Protein FCC1311_047382 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 253.8 bits (647), Expect = 7.800e-64
Identity = 124/249 (49.80%), Postives = 164/249 (65.86%), Query Frame = 0
Query:  111 HLIVVAGHAVTITESLEGVEEEDHVWYLLPYQKAQDLPATFVAHIKAGVSLAQRDPASLLVFSGGQTRVDAGPWSEGAAYYRVAEHFGWWDPASDPSPEVKGRALAEEYALDSFENLLYSICRFKEYTGHYPTRITVVSFAFKRARFLSHHRGALRFPEAQFEYMGLDPPPEGRFDRKKAVE-GEYHDALKLFESDPYGCHSKTLQEKRASRNPFRRTAPYALACPEIAPLLEYCQRTIYP-HALPWDA 358
            +LI+VA H++T+ ESLEGV+  D  W L+ YQK   +P  F  HI+ G+ LA  DP +L++FSGGQTR+ AGP SE  +Y+ VA+HFGWW  +S  + EV+ RA  EEY+ DS ENLL+S+CRF E +G YP  +TVV + FK+ RF   HR ALR+P   F Y+G+DP       R   +E  E   +L  F  DPYGCHS+ L+ KR  RNPF R   + L+CPEI+ LL YC+R +YP   LPWD+
Sbjct:   61 NLILVACHSITVGESLEGVDVRDDRWMLVDYQKHASMPQAFTGHIRKGIELALEDPHALVIFSGGQTRLHAGPKSEANSYFFVADHFGWW--SSRAAKEVRPRAALEEYSTDSLENLLFSLCRFHELSGSYPKHVTVVGYTFKQERFRDLHRAALRYPLESFRYVGVDPDTNAFRARLPQLEFFESTASLAPFREDPYGCHSEVLRTKRVDRNPFSRQPGFILSCPEISTLLRYCERKLYPVGELPWDS 307          
The following BLAST results are available for this feature:
BLAST of NO13G00260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22838.12.500e-11059.49hypothetical protein Naga_100295g2 [Nannochloropsi... [more]
OLP92244.14.100e-7349.48Uncharacterized protein C57A10.07 [Symbiodinium mi... [more]
GAX20826.13.300e-7051.59hypothetical protein FisN_7Hh140 [Fistulifera sola... [more]
XP_002178493.11.400e-6851.79predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX11759.15.200e-6850.20hypothetical protein FisN_7Lh140 [Fistulifera sola... [more]
CBJ30413.12.200e-6651.39conserved unknown protein [Ectocarpus siliculosus][more]
OEU10241.15.400e-6550.41hypothetical protein FRACYDRAFT_151991, partial [F... [more]
EJK44735.19.200e-6549.81hypothetical protein THAOC_36702, partial [Thalass... [more]
XP_002290220.11.200e-6449.80predicted protein, partial [Thalassiosira pseudona... [more]
GBG28515.17.800e-6449.80Hypothetical Protein FCC1311_047382 [Aurantiochytr... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL132nonsL132Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR057ngnoR057Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR056ngnoR056Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001916NSK001916Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G00260.2NO13G00260.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO13G00260.1NO13G00260.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597076gene_6991Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100295g2gene7613Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G00260.2NO13G00260.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO13G00260.1NO13G00260.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G00260 ID=NO13G00260|Name=NO13G00260|organism=Nannochloropsis oceanica|type=gene|length=3931bp
CCCCCCTCCCCCTCATAACCAGCCAATCCGCCAGCACGACCGCAACAAAC
ACTACCACATTATCCCACCCCTCCGGAACCGGTAATGTCTCCGCCGCCGC
ACTCAACAACGTGGCCCCCCACACCCTCTCCCCCACCCCCCTCCTCCCTC
TCTCTGCAACGGCGATCCACCCGTGGTATTGGAAATATGCCGCGAGGCAG
AAAGAGGTCAAGACACTGGCAGCGATGAAGCCCAGCGTGCCCACCCACGA
CTTGCTACGACACCAGGGAATCCGCCCTCTTTGTTGTGGTTGTTGTTGTT
GTTGTTGTGGTTGGTCGTGGTGGTGGTGTTGGAGTTGTGGCTCTGACTGC
CATGTGAGTTTTTTTCCGTCGTCGTCGTGTTTCACGTTTTGAATCGCCAA
AGGTGCACACCGACGACCAATCAAGTCCGCGAAGCCGTCGCCCGCACACA
GGCACGAAATACACAGGGCGGCAGTCAGGTGCCGCCAGTACACCAGCGTA
GCAACGATCATGACGCTTCCATACAAGAAAGGCCCGCGCAACAACTCCTG
CCGGGCGCCGGTCCTGCTCATGCTTTGCACGGTCGCCTGATTTTGTGCTA
TTCCCAGGCCGACAAGTGTGAAGAAAGACGTCAAGGCCAAGGGCGCCACC
ATGGCAAAGGAGGAGGCATGTGACGACTGGGAAAAGAGAGGCCAGCATAG
CAGAAAGATGGGGCCACAACCGACGTGCATGAACTTGCGTGCGGTTGTGG
AGGCACAGATCTTGCGGGCGGCGAGGAGTTTGACGCCTTCCGAGTAGGAG
ACCATGGCCAGGGACGTGAGGAGGAGGGCGCGGGTATCGTGTGCATGGGG
GTTGGCGAGGGTCTTGGCCGTGAAGAAGGACGAGGCGGTGGTGGGAGTGG
GAGTGCTGGCGGCGGCGGGGGCCAGGGAGAAGGTCGGCATAATTAGAAGA
GGTGATACAACTTATCTCTGTGTACAGGTGGGGACCGCATATGGGAGAGA
TGAGGTGTGTGTCGGTCGAGACAACTCAACAAGCAATGGCAACGGCAATG
CATTGAAGTCCATGTTTTTGAATTCTACATCAATGCAACGCCTCAATTTC
TATGTTTTCCACGCCCATCATACCACTCCACGCTCACCCATGCGCACACC
TGTACACTTCTCGCAGCAGCCACCTGCCCCAGTCGGATGATGGGGACATG
GCTTGTCGTATCAGAATGGTGAACGTGTGAGCAAAGAGGCCCATTTCTCC
TCATCACACTATACGCATCCCGCCGCACACGCTCGTCGTCCCGTCCTCCG
CTTACCTGCGCCCTCGGCAGTCAAAAAACGAAAGAAACCAGCGACGACAT
TAGATGATAGACTCCTTCGTCAGCCTTAGATCCACCGTTCGTCAGCGTTT
CGCGgtaagtgaggggtcaacggcgcgggcttccttcagggcattgatcc
acgcctccccctctccctcgcttattctcacccaaccacccacacataca
gAATTTAACAGAGCAGTATCCCACTGGCATGGTGCGTGCCAGAAGTGCGA
GCAAGACGCTAGGGACCTGCTTGACTATCGTCATGgtaagggagggaggg
aaggaagagggaagaggagaacgagagtacggaaaagaagcggatttagt
gcttggagacgaaggaggacttgtcaatcatttccttttcgaaccatccc
cttctgtcccctaccctgctgctcccatcttgctctcaattcgactgatg
tctttctgtgtaatcgtcagtgtgtctcccccttcctttccccctctctc
tcccctacctccacctcgactctcacaacctcttcacccccagGCGGTCG
TCTACATGTCCATGATCTATCTTGTCGTCGGTCGCGTATCCAGCCCCTCT
CTCTCCCTCCTCAACGCCACCACAAGCACCAGCTACAGCACCAATCTCCG
CGGCGCCTCCTCCTCCTCCTCCTCCCCCTCTCTCTCCAAATTTCGCAACA
ACCCCCTCCCCTCCCTCCCCAATAGCGCCGCCCTCACCCACCTCATCGTC
GTTGCCGGCCACGCCGTCACTATCACCGAATCCCTCGAGGGCGTGGAGGA
GGAGGACCATGTGTGGTACCTCCTCCCCTACCAGAAGGCGCAGGACCTTC
CCGCCACATTTGTGGCGCACATTAAAGCAGGCGTAAGCTTGGCCCAGAGA
GACCCGGCTTCTCTGTTGGTCTTCTCGGGAGGGCAGACAAGGGTCGATGC
GGGCCCGTGGAGCGAGGGGGCTGCATACTACCGTGTGGCGGAGCATTTTG
GGgttcgtgggggagggagggagggagggagggtgggagggtgagggagg
ggtgggaggggaagggggaggatgggagggaggaggaagggagattggaa
agggaaggggccatatcaattgcgtgtcagctggtgccttctgtctgagc
cgaggcagagaaatcctccttctaaccccaacgccatctccctccctccc
tgcagTGGTGGGATCCTGCGTCTGACCCCAGTCCAGAGGTGAAAGGCCGG
GCGTTGGCGGAAGAGTACGCGCTCGACTCCTTCGAGAACCTTCTATACTC
CATCTGCCGCTTCAAGgtaacccaaggcagaaaaatgtggcagtcatcag
ttccctccgtccctccctccctccctccgtccctccctccctccccttcc
tcccttctggagtacacagatcatcaacccctcccaatcatcgtcttttc
cttcgcttttcacctcatccctccctccttccttccctccctgcttcgcc
gtctcggtgcagGAGTACACAGGCCACTACCCTACCCGCATCACCGTCGT
CTCCTTCGCGTTTAAGCGCGCCCGCTTCTTGTCACACCACCGGGGGGCTC
TACGTTTCCCCGAGGCTCAATTCGAATATATGGGCCTTGATCCACCACCA
GAGGGACGCTTTGACCGCAAGAAGGCCGTGGAGGGGgtggggagggaggg
agggagggagggagggagggagggaatgtcggtgggggtcgttcgctcgc
tgtttttcaattgtgtggcctgatttgttttgatgtcgctttgtgtcttt
tttttgcgtttgctcttggaggtctcccttcatttggtggtgcccttgtc
tgtcatgctcgcgagtgtcctctatttaattctttccttttgccttgcct
tgcatggaagcctctttcctttattattattcattctcaccagccttctc
cctccctccctccctcttttcctccctccctccctccctccctctctccc
accctaccttcctccttctttccctcccgcctccttcctcagGAGTACCA
CGATGCCTTAAAGCTGTTCGAATCCGACCCCTATGGCTGTCACTCCAAGA
CACTTCAAGAGAAACGAGCAAGCCGCAACCCATTCCGTCGCACCGCGCCC
TACGCCCTCGCCTGCCCTGAGATCGCCCCCCTCCTTGAGTATTGCCAGCG
TACCATCTACCCTCATGCGCTCCCGTGGGACGCGCACTAGGCGGCGAGAA
GGAGAAGATTAGCGTGAGGGAGGGGGAAAGGGATAGAGTATGAGTCTCTG
CGAGGAAGAGTGAGCAAGCGGGAGAAAGACATGAAAGGGAGGGAGGGAGG
GAGAGAGGGATGGCCTCGTGGAGGCCATAATGCTAGATCAGTGGCAAAAC
AATTTAGAAGCTGTTTGCGTTCGTGTAACCGGAAGCATTGCTACGCGCTC
CGAGCATAAGGAGGAGAGAGAAAGTGTGACTACTGCTTCAAGGCAGTGAG
CGTCGACGCGTGAGGAGGGGCACAATTAAAGTCACTGATTGTACAGTAAA
CACCTCCCCGGGCGATCTCCGAGAAGAAATAGAATGGAATGCAAAAATCG
CACTCCTCGTCTTTCGATCAAAACGTGTCGA
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protein sequence of NO13G00260.2

>NO13G00260.2-protein ID=NO13G00260.2-protein|Name=NO13G00260.2|organism=Nannochloropsis oceanica|type=polypeptide|length=445bp
MIDSFVSLRSTVRQRFANLTEQYPTGMVRARSASKTLGTCLTIVMVREGG
KEEGRGEREYGKEADLVLGDEGGLVNHFLFEPSPSVPYPAAPILLSIRLM
SFCVIVSVSPPSFPPLSPLPPPRLSQPLHPQAVVYMSMIYLVVGRVSSPS
LSLLNATTSTSYSTNLRGASSSSSSPSLSKFRNNPLPSLPNSAALTHLIV
VAGHAVTITESLEGVEEEDHVWYLLPYQKAQDLPATFVAHIKAGVSLAQR
DPASLLVFSGGQTRVDAGPWSEGAAYYRVAEHFGWWDPASDPSPEVKGRA
LAEEYALDSFENLLYSICRFKEYTGHYPTRITVVSFAFKRARFLSHHRGA
LRFPEAQFEYMGLDPPPEGRFDRKKAVEGEYHDALKLFESDPYGCHSKTL
QEKRASRNPFRRTAPYALACPEIAPLLEYCQRTIYPHALPWDAH*
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protein sequence of NO13G00260.1

>NO13G00260.1-protein ID=NO13G00260.1-protein|Name=NO13G00260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=359bp
MIDSFVSLRSTVRQRFANLTEQYPTGMVRARSASKTLGTCLTIVMAVVYM
SMIYLVVGRVSSPSLSLLNATTSTSYSTNLRGASSSSSSPSLSKFRNNPL
PSLPNSAALTHLIVVAGHAVTITESLEGVEEEDHVWYLLPYQKAQDLPAT
FVAHIKAGVSLAQRDPASLLVFSGGQTRVDAGPWSEGAAYYRVAEHFGWW
DPASDPSPEVKGRALAEEYALDSFENLLYSICRFKEYTGHYPTRITVVSF
AFKRARFLSHHRGALRFPEAQFEYMGLDPPPEGRFDRKKAVEGEYHDALK
LFESDPYGCHSKTLQEKRASRNPFRRTAPYALACPEIAPLLEYCQRTIYP
HALPWDAH*
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Synonyms
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