NO12G03930, NO12G03930 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G03930 vs. NCBI_GenBank
Match: XP_016613085.1 (hypothetical protein SPPG_00723 [Spizellomyces punctatus DAOM BR117] >KND05046.1 hypothetical protein SPPG_00723 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 367.9 bits (943), Expect = 5.100e-98 Identity = 167/253 (66.01%), Postives = 209/253 (82.61%), Query Frame = 0 Query: 149 IREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDV-TAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGL 401 +REVW NL+ EM +R++VERYPY++MDTEFPGVVARP+G+ T+ADY Y+TL+CNVDLLKIIQLG++FAD EGN PP TWQ NFKF+L+DDMYA+DSI+LL +SGIDF K+E +GIDV FGELL++SG VL+DDV+W+SFHSGYDFGYLLK+LTC LPA+E+ FFDLLR YFPC YDIKYLM +C L GGLQ +A++L +AR+GP HQAGSDSLLT++TFF++ F+ + D KF G L+GL Sbjct: 19 VREVWDSNLEDEMAVLRDLVERYPYLSMDTEFPGVVARPIGNFRTSADYHYQTLRCNVDLLKIIQLGITFADEEGNHPPGVCTWQFNFKFNLSDDMYAQDSIDLLTKSGIDFKKNEEYGIDVEHFGELLISSGFVLLDDVKWVSFHSGYDFGYLLKILTCQPLPAEESDFFDLLRIYFPCIYDIKYLMKSCKNLKGGLQDVADDLQIARVGPQHQAGSDSLLTSKTFFKMRQTFFD--DRIDDSKFLGYLYGL 269
BLAST of NO12G03930 vs. NCBI_GenBank
Match: CDH54244.1 (ccr4-not transcription complex subunit 7 [Lichtheimia corymbifera JMRC:FSU:9682]) HSP 1 Score: 365.9 bits (938), Expect = 1.900e-97 Identity = 170/268 (63.43%), Postives = 215/268 (80.22%), Query Frame = 0 Query: 149 IREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDV-TAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGLGHNHTVYRNKMQATN 416 I+EVW ENL+ EM +R++VE YPY+AMDTEFPGVVARP+G T++DY Y+TL+CNVD+LKIIQLG++FAD GN P + TWQ NFKFSL++DMYA+DSIELL +SGIDF KHE HGIDV FGELL++SG VL++DV+WISFHSGYDFGYLLK+LTCS +PADE FF++LR YFPC YDIKYLM +C L GGLQ IA++L VAR+GP HQAGSDSLLT TFF++ + F+ + D+K+ G L+GL + + ++ QAT+ Sbjct: 9 IKEVWSENLEEEMAHLRDLVEEYPYLAMDTEFPGVVARPIGTFRTSSDYHYQTLRCNVDVLKIIQLGITFADEHGNIPRNICTWQFNFKFSLSEDMYAQDSIELLTKSGIDFKKHEEHGIDVEHFGELLISSGFVLLEDVKWISFHSGYDFGYLLKLLTCSPMPADETEFFEILRLYFPCIYDIKYLMRSCKNLKGGLQDIADDLQVARVGPQHQAGSDSLLTCTTFFKMRQMFFD--DRIDDQKYLGYLYGLRSSPSAVQSLTQATS 274
BLAST of NO12G03930 vs. NCBI_GenBank
Match: ORY99279.1 (ribonuclease H-like domain-containing protein [Syncephalastrum racemosum]) HSP 1 Score: 365.9 bits (938), Expect = 1.900e-97 Identity = 173/269 (64.31%), Postives = 218/269 (81.04%), Query Frame = 0 Query: 149 IREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDV-TAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGLGHN-HTVYRNKMQATN 416 I+EVW +NL+ EM +R++VE +PY+AMDTEFPGVVARP+G T++DY Y+TL+CNVDLLKIIQLG++FAD GN P + TWQ NFKF+L+DDMYA+DSIELL +SGIDF +HE GIDV FGELL++SG VL+DDV+WISFHSGYDFGYLLK+LTCS++PADE+ FFDLLR YFPC YDIKYLM +C L GGLQ IA++L V+RIGP HQAGSDSLLT TFF++ V F+ + D+K+ G LFGL ++ + ++ +QATN Sbjct: 9 IKEVWADNLEEEMEYLRDLVEEFPYLAMDTEFPGVVARPIGTFRTSSDYHYQTLRCNVDLLKIIQLGVTFADEHGNLPRNVCTWQFNFKFNLSDDMYAQDSIELLTKSGIDFKRHEEDGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKLLTCSSMPADESEFFDLLRIYFPCIYDIKYLMRSCKNLKGGLQDIADDLQVSRIGPQHQAGSDSLLTCSTFFKMRAVFFD--DRIDDQKYLGYLFGLKNSTSSSVQSLVQATN 275
BLAST of NO12G03930 vs. NCBI_GenBank
Match: EXX67656.1 (Pop2p [Rhizophagus irregularis DAOM 197198w] >GBC21301.1 CCR4-NOT transcription complex subunit 7/8 [Rhizophagus irregularis DAOM 181602]) HSP 1 Score: 365.5 bits (937), Expect = 2.500e-97 Identity = 172/254 (67.72%), Postives = 207/254 (81.50%), Query Frame = 0 Query: 149 IREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDV-TAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGLG 402 I+EVW ENL+ EM +R+ VE+YP++AMDTEFPGVVARP+G+ T++DY Y+TL+CNVDLLKIIQLG++FAD G PPD TWQ NFKF+L DMYA+DSI+LL +SGIDF KHE +GIDV FGELL++SG VL+DDV+WISFHSGYDFGYLLKVLTCS LPA+E+ FFDLLRTYFPC YDIKYLM + L GGLQ IA++L V+RIGP HQAGSDSLLTA TFF++ FN + D K+ G L+GLG Sbjct: 10 IKEVWAENLEEEMAILRDRVEQYPFLAMDTEFPGVVARPIGNFRTSSDYHYQTLRCNVDLLKIIQLGITFADENGTLPPDTCTWQFNFKFNLGGDMYAQDSIDLLTKSGIDFKKHEDYGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKVLTCSPLPAEESEFFDLLRTYFPCIYDIKYLMKSFKNLKGGLQDIADDLQVSRIGPQHQAGSDSLLTATTFFKMRQTFFN--DKIDDTKYLGYLYGLG 261
BLAST of NO12G03930 vs. NCBI_GenBank
Match: ORY52966.1 (ribonuclease CAF1 [Rhizoclosmatium globosum]) HSP 1 Score: 365.2 bits (936), Expect = 3.300e-97 Identity = 164/253 (64.82%), Postives = 211/253 (83.40%), Query Frame = 0 Query: 149 IREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDV-TAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGL 401 I++VW L+ EM +RE+VERYP ++MDTEFPGVVARP+G+ T+ADYQY+TL+CNVDLLKIIQLG++FAD GN+PP+ TWQ NFKF+LN+DMYA+DSI+LL +SGIDF KHE +GIDV FGELL++SG VL+DDV+WISFHSGYDFGYLLKV TC+ LPA+E+ FF+L++ YFPC YDIKYLM +C L GGLQ +A++L ++RIGP HQAGSDSLLT++TFF++ F+ ++ DEK+ G L+GL Sbjct: 9 IKDVWAHTLEAEMAVLRELVERYPCISMDTEFPGVVARPIGNFKTSADYQYQTLRCNVDLLKIIQLGITFADENGNTPPNTCTWQFNFKFNLNEDMYAQDSIDLLTKSGIDFKKHEEYGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKVATCAPLPAEESDFFELMKLYFPCVYDIKYLMKSCKNLKGGLQDVADDLQISRIGPQHQAGSDSLLTSKTFFKMRETFFD--DHIDDEKYMGYLYGL 259
BLAST of NO12G03930 vs. NCBI_GenBank
Match: XP_006680570.1 (hypothetical protein BATDEDRAFT_90073 [Batrachochytrium dendrobatidis JAM81] >EGF79089.1 hypothetical protein BATDEDRAFT_90073 [Batrachochytrium dendrobatidis JAM81] >OAJ42206.1 hypothetical protein BDEG_25694 [Batrachochytrium dendrobatidis JEL423]) HSP 1 Score: 363.2 bits (931), Expect = 1.200e-96 Identity = 165/253 (65.22%), Postives = 209/253 (82.61%), Query Frame = 0 Query: 149 IREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDV-TAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGL 401 +++VW NL+ EM IR++VE YP+VAMDTEFPGVVARP+G+ T++DY Y+TL+CNVDLLKIIQLGL+F+D+ GN PP TWQ NFKFSL+DDMYA+DSI+LL +SGIDF KHE +GI V +FGEL+++SGLVL+DDV+WISFHSGYDFGYLLKV+TC LPA+E FF+LL+ YFPC YD+K+LM +C L GGLQ +A+EL VAR+GP HQAGSDSLLT++TFF++ + F + DEK+ G LFGL Sbjct: 6 VQDVWAANLEKEMAVIRDIVELYPFVAMDTEFPGVVARPIGNFRTSSDYHYQTLRCNVDLLKIIQLGLTFSDSHGNLPPGRTTWQFNFKFSLSDDMYAQDSIDLLTKSGIDFKKHEKYGISVEQFGELMISSGLVLLDDVKWISFHSGYDFGYLLKVVTCQELPAEETAFFELLKLYFPCIYDVKFLMRSCKNLKGGLQDVADELQVARVGPQHQAGSDSLLTSKTFFKMRQLYFE--DTIDDEKYLGCLFGL 256
BLAST of NO12G03930 vs. NCBI_GenBank
Match: XP_023471704.1 (ribonuclease CAF1 [Rhizopus microsporus ATCC 52813] >CEI89573.1 Putative CCR4-NOT transcription complex subunit 7 [Rhizopus microsporus] >ORE10649.1 ribonuclease CAF1 [Rhizopus microsporus var. microsporus] >PHZ17996.1 ribonuclease CAF1 [Rhizopus microsporus ATCC 52813]) HSP 1 Score: 362.8 bits (930), Expect = 1.600e-96 Identity = 169/246 (68.70%), Postives = 202/246 (82.11%), Query Frame = 0 Query: 149 IREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDV-TAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKF 394 I+EVW ENL+ EM +R++VE YPY+AMDTEFPGVVARP+G T++DY Y+TL+CNVDLLKIIQLG++FAD GN P + TWQ NFKFSL DDMYA+DSIELL +SGIDF KHE +GIDV FGELL++SG VL+DDV+WISFHSGYDFGYLLK+LTCS +PADE+ FFDLLRTYFPC YDIKYLM +C L GGLQ IA++L VARIGP HQAGSDSLLT TFF++ + F + D+K+ Sbjct: 9 IKEVWAENLEEEMAYLRDLVEDYPYLAMDTEFPGVVARPIGSFKTSSDYHYQTLRCNVDLLKIIQLGVTFADQHGNLPGNVCTWQFNFKFSLTDDMYAQDSIELLTKSGIDFKKHEEYGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKILTCSVMPADESEFFDLLRTYFPCIYDIKYLMKSCKNLKGGLQDIADDLQVARIGPQHQAGSDSLLTCTTFFKMRQMFFE--DKIDDQKY 252
BLAST of NO12G03930 vs. NCBI_GenBank
Match: CDH53595.1 (caf1 family protein [Lichtheimia corymbifera JMRC:FSU:9682]) HSP 1 Score: 362.5 bits (929), Expect = 2.100e-96 Identity = 168/268 (62.69%), Postives = 217/268 (80.97%), Query Frame = 0 Query: 149 IREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDV-TAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGLGHNHTVYRNKMQATN 416 IREVW +NL+ EM +R++VE YPY+AMDTEFPGVVARP+G T++DY Y+TL+CNVDLLKIIQLG++FAD GN P + TWQ NFKF++ DDMYA+DSIELL +SGIDF KH+ +GIDV +FGELL++SG VL+DDV+WISFHSGYDFGYLLK+LTC+++PADE+ FF++LR YFPC YDIKYLM +C L GGLQ IA++L VAR+GP HQAGSDSLLT TFF++ + F+ + D+K+ G L+GL + + + +QAT+ Sbjct: 9 IREVWADNLEEEMAYLRDLVEDYPYLAMDTEFPGVVARPIGTFRTSSDYHYQTLRCNVDLLKIIQLGVTFADEHGNLPRNVCTWQFNFKFNIADDMYAQDSIELLTKSGIDFQKHDEYGIDVEQFGELLISSGFVLLDDVKWISFHSGYDFGYLLKLLTCTSMPADESEFFEILRIYFPCIYDIKYLMRSCKNLKGGLQDIADDLQVARVGPQHQAGSDSLLTCTTFFKMRQMFFD--DRIDDQKYLGYLYGLRSSPSSMQALVQATS 274
BLAST of NO12G03930 vs. NCBI_GenBank
Match: XP_004337732.1 (ccr4associated factor, putative [Acanthamoeba castellanii str. Neff] >ELR15719.1 ccr4associated factor, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 361.7 bits (927), Expect = 3.600e-96 Identity = 167/261 (63.98%), Postives = 203/261 (77.78%), Query Frame = 0 Query: 143 DGKRMEIREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDV-TAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGLGH 403 +G EIREVW ENL+ EM IR++VE YPY+AMDTEFPG+VARP+G+ + ++Y Y+TL+CNVDLLKIIQLGL+F D EG PP TWQ NFKFSL +DMYA+DSI+LL +SGI+F +HE HG+DV FGELL +SG+VL D ++WISFHSGYDFGYLLK+LTC LPA E FF+LL YFPC YDIKYLM +C L GGL ++A +L V RIGP HQAGSDSLLT+ TFF++ + F NL D KF G L+GLGH Sbjct: 6 NGLEPEIREVWAENLEEEMAHIRDIVEDYPYIAMDTEFPGIVARPIGNFKSPSEYHYQTLRCNVDLLKIIQLGLTFTDGEGRLPPGVATWQFNFKFSLTEDMYAQDSIDLLTRSGINFKRHEEHGVDVSHFGELLTSSGIVLDDRIKWISFHSGYDFGYLLKILTCKPLPAQEEEFFELLLAYFPCIYDIKYLMKSCKSLKGGLNELANDLEVERIGPQHQAGSDSLLTSATFFKMKRMFFE--NNLDDSKFLGVLYGLGH 264
BLAST of NO12G03930 vs. NCBI_GenBank
Match: GAN07390.1 (CCR4 associated factor [Mucor ambiguus]) HSP 1 Score: 361.3 bits (926), Expect = 4.700e-96 Identity = 172/258 (66.67%), Postives = 207/258 (80.23%), Query Frame = 0 Query: 149 IREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDV-TAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLN-----DDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGL 401 I+EVW ENL+ EM +R++VE YPY+AMDTEFPGVVARP+G T++DY Y+TL+CNVDLLKIIQLG++FAD GN P + TWQ NFKF+L+ DDMYA+DSIELL +SGIDF KHE +GIDV FGELL++SG VL+DDV+WISFHSGYDFGYLLKVLTCS +PADE FF+LLRTYFPC YDIKYLM +C L GGLQ IA++L VARIGP HQAGSDSLLT TFF++ + F + D+K+ G L+GL Sbjct: 9 IKEVWAENLEEEMAHLRDLVEEYPYLAMDTEFPGVVARPIGTFKTSSDYHYQTLRCNVDLLKIIQLGVTFADQYGNLPGNICTWQFNFKFNLSPNTCRDDMYAQDSIELLTKSGIDFKKHEEYGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKVLTCSIMPADETEFFELLRTYFPCIYDIKYLMKSCKNLKGGLQDIADDLQVARIGPQHQAGSDSLLTCTTFFKMRQMFFE--DRIDDQKYLGYLYGL 264 The following BLAST results are available for this feature:
BLAST of NO12G03930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G03930 ID=NO12G03930|Name=NO12G03930|organism=Nannochloropsis oceanica|type=gene|length=3326bpback to top protein sequence of NO12G03930.4 >NO12G03930.4-protein ID=NO12G03930.4-protein|Name=NO12G03930.4|organism=Nannochloropsis oceanica|type=polypeptide|length=457bpback to top protein sequence of NO12G03930.3 >NO12G03930.3-protein ID=NO12G03930.3-protein|Name=NO12G03930.3|organism=Nannochloropsis oceanica|type=polypeptide|length=444bpback to top protein sequence of NO12G03930.2 >NO12G03930.2-protein ID=NO12G03930.2-protein|Name=NO12G03930.2|organism=Nannochloropsis oceanica|type=polypeptide|length=492bpback to top protein sequence of NO12G03930.1 >NO12G03930.1-protein ID=NO12G03930.1-protein|Name=NO12G03930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=479bpback to top Synonyms
Publications
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