NO12G03540, NO12G03540 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G03540 vs. NCBI_GenBank
Match: GAX17092.1 (hypothetical protein FisN_5Hh478 [Fistulifera solaris]) HSP 1 Score: 149.4 bits (376), Expect = 2.200e-32 Identity = 100/268 (37.31%), Postives = 147/268 (54.85%), Query Frame = 0 Query: 129 APIAVLGARGKTGKLIVQQLLAQGKCVRALSYQPFEYDKKDIPSGVDVSSLLTYAIGDVTKPETLSPAIKGASAVIFAASAS--KNGGKAQAVDCDGVENIARSCIAEKIPRLLVISSGAVTKPDSFGYKVTNLFAR-----GIMGLKLEGENRLRALYASSAPPGVTYTVLRPGGLSNDKGLGVSGIELNQKDTIIGEISRVDVA-ATXXXXXXXXXXXXXXFEVYEIGRRTPLQKEFPEKSGMERRAG--TWEEIFKGLVKDSALQ 387 +PI VLGA GK GKL + L +G VRA + +K+ P ++YA DVT+ E+L ++KGAS VIFAASAS K GG+ AVD GV N A++C+ +K+ +L+V+S+ T+PDS G+K TN F + IM K+ GE +R LYAS+ G Y V+RPGGL++ K +G + + ++Q D EISR DVA T FE+ + K+ P+ AG +++ + GL+ D ++ Sbjct: 91 SPIVVLGAGGKVGKLCTEILANKGLYVRATTRSGRSILEKESP-------FVSYAQADVTQLESLENSVKGASGVIFAASASGKKKGGEPVAVDYLGVYNAAKACLDQKVSKLVVVSAATATRPDSLGFKATNYFVKFVYGDRIMDSKIAGEAAMRDLYASAGSKG--YAVVRPGGLNDKKSVGSAKVHVSQGDVYASEISREDVALVTVATLLKGAATDGVTFELNQEEGLAKALKDLPDPPAELVHAGAPSFDALLDGLLTDEQIK 349
BLAST of NO12G03540 vs. NCBI_GenBank
Match: XP_007515782.1 (predicted protein [Bathycoccus prasinos] >CCO14661.1 predicted protein [Bathycoccus prasinos]) HSP 1 Score: 146.7 bits (369), Expect = 1.400e-31 Identity = 101/269 (37.55%), Postives = 137/269 (50.93%), Query Frame = 0 Query: 131 IAVLGARGKTGKLIVQQLLAQG----KCVRALSYQPFEYDKKDIPSGVDVSSLLTYAIGDVTKPETLSPAIKGASAVIFAASASKNGGKAQAVDCDGVENIARSCIAEK-IPRLLVISSGAVTKPDSFGYKVTNLFARGIMGLKLEGENRLRALYASSAPPGVTYTVLRPGGLSNDKGLGVSGIELNQKDTIIGEISRVDVAATXXXXXXXXXXXXXXFEVYEIGRRTPLQKEFPEKSGME-----------RRAGTWEEIFKGLVKDS 384 I V+GA GKTGK V+ G R S+ D K+ G + T + ++ AI GA +VIFAAS+SK+GG Q +D DG +AR+C++ K + R +V++SGAV+KP S Y NLF GIM K+EGE+ +RALY YT++RPGGL+ D GVS ELNQ D + G +SR DVAA FE+Y P+ + F + E RR TW+E+F GL D+ Sbjct: 32 IVVIGANGKTGKRCVKYAAENGWDVVAATRNGSFPSLTSDIKEEARG----RVTTKQCSVTSSMAEITNAIDGAESVIFAASSSKDGGSPQEIDRDGCIKVARACLSSKSVKRYVVVTSGAVSKPYSPVYIFLNLFG-GIMRAKIEGEDAVRALYYEREDD--FYTIVRPGGLTEDPPRGVSACELNQGDDVSGRVSREDVAAVCVECLKRDDAKNATFELYYRDTGKPMAEVFASNANKETDGERQMGPRGRRGETWDELFAGLEADA 293
BLAST of NO12G03540 vs. NCBI_GenBank
Match: XP_003057238.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH58883.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 124.4 bits (311), Expect = 7.700e-25 Identity = 98/289 (33.91%), Postives = 139/289 (48.10%), Query Frame = 0 Query: 133 VLGARGKTGKLIVQQLLAQGKCVRALSYQPFEYDKKDIPSGVDVSSLLTYAIGDVTKPET-LSPAIKGASAVIFAASASKNGGKAQAVDCDGVENIARSCIAEKIPRLLVISSGAVTKPDSFGYKVTNLFARGIMGLKLEGENRLRALYASSA--PPGVTYTVLRPGGLSNDKGLGVSGIELNQKDTIIGEISRVDVAATXXXXXXXXXXXXXXFEVYE---------------IGRRTPLQKEFPEKSGMERRAG--------------------TWEEIFKGLVKDS 384 VLGA G+TG IV++L+ G VRA + + +D S S+L+T DV ++ A+ GA V FAA+AS + G AVD DGV ++AR+C+ + RL+++S VTK ++ Y N F G M K GE+ LRA+Y S+A G TYT++RP GL + G + + +NQ D + G I+R D AA FEVYE + RT L K G+ RR G TWE +F+GL +D+ Sbjct: 64 VLGAGGRTGTEIVKRLVRNGANVRACT-RSGAFDAAAATSAPWSSTLVTRCACDVAAGAAGVAAAVAGADVVYFAATASAS-GDPDAVDRDGVVDVARACVENDVRRLVLVSGAGVTKREAPAYGFLNAFG-GRMDAKAAGEDGLRAVYQSTAAVERGCTYTIVRPSGLLDGDAKGAASLAVNQGDEVAGFITRADAAAACVEAAESANCANRTFEVYERDTAVATATLSIADILSDRT-LAKVVAFAEGVFRRRGGGEGDGVAAEVLTAREVTSETWEGLFRGLTRDA 348
BLAST of NO12G03540 vs. NCBI_GenBank
Match: XP_002501087.1 (predicted protein [Micromonas commoda] >ACO62345.1 predicted protein [Micromonas commoda]) HSP 1 Score: 119.0 bits (297), Expect = 3.200e-23 Identity = 73/177 (41.24%), Postives = 95/177 (53.67%), Query Frame = 0 Query: 184 IGDVTKPETLSPAIKGASAVIFAASASKNGGKAQAVDCDGVENIARSCIAEKIPRLLVISSGAVTKPDSFGYKVTNLFARGIMGLKLEGENRLRALYASSAPPGVT------YTVLRPGGLSNDKGLGVSGIELNQKDTIIGEISRVDVAATXXXXXXXXXXXXXXFEVYEIGRRTP 355 + DVT+PET++ A +GA AV FA +A N G+ VD G+ ++AR+CI + RL+VIS VTK S Y N F G M KL GE+ LR Y ++A G T YT++RP GL + +G GV + +NQ D G I RVD A T FEVYE G P Sbjct: 1 MADVTRPETVATATRGARAVFFACTAPAN-GEPDLVDRKGLVDVARACIENNVSRLVVISGAGVTKTSSPAYGFLNAFG-GRMDAKLAGEDELRETYRAAAAAGRTKGDVASYTIVRPSGLLDGRGKGVRALAVNQGDEAAGFIDRVDAAETAVEASMNPNCARVTFEVYEAGTAVP 175
BLAST of NO12G03540 vs. NCBI_GenBank
Match: XP_005836241.1 (hypothetical protein GUITHDRAFT_68057 [Guillardia theta CCMP2712] >EKX49261.1 hypothetical protein GUITHDRAFT_68057 [Guillardia theta CCMP2712]) HSP 1 Score: 114.0 bits (284), Expect = 1.000e-21 Identity = 89/261 (34.10%), Postives = 129/261 (49.43%), Query Frame = 0 Query: 107 GLGLGALTLLPSLTVSAAADRSAPIAVLGARGKTGKLIVQQLLAQGKCVRALSYQPFEYDKKDIPSGVDV--------SSLLTYAIGDVTKPETLSPAIKGASAVIFAA-------SASKNGGKAQAVDCDGVENIARSCIAEKIPRLLVISSGAVTKPDSFGYKVTNLFARGIMGL-----KLEGENRLRALYASSAPPGVTYTVLRPGGLSNDKGLGVSGIELNQKDTIIGEISRVDVAATXXXXXXXXXXXXXXFEVY 348 G GL ALT AD +AV+GA G TG V+ L+ +G+ V A + +P + + G D +L+ AI DV K ++ AI+GA AVIF A +A+K + V+ G+EN+A++CIA KIPRL+++SS Y V + RG K GE+ +R LYA++ P ++YT++RPG L+ + GV +E NQ T G ISR+D+A FEVY Sbjct: 6 GFGLAALTTPSFSGAEPNADFEDAVAVIGAGGYTGGDTVRSLIKKGQKVIACTRRP-QKIVLNAERGPDTIVLDDERERNLVRSAIVDVNKASSIPSAIQGAKAVIFTAASRPKTFAAAKVAPPSDHVEDIGLENVAKACIANKIPRLVIVSSVCAKCRKKQEYDVPDQLDRGAASCDACYKKQAGEDAVRELYAAAKDPSLSYTIVRPGMLTLGEARGVKEVEFNQGVTKSGMISRLDLADILTAAALSKDADGKTFEVY 265
BLAST of NO12G03540 vs. NCBI_GenBank
Match: XP_005840784.1 (hypothetical protein GUITHDRAFT_100773 [Guillardia theta CCMP2712] >EKX53804.1 hypothetical protein GUITHDRAFT_100773 [Guillardia theta CCMP2712]) HSP 1 Score: 111.3 bits (277), Expect = 6.700e-21 Identity = 83/237 (35.02%), Postives = 115/237 (48.52%), Query Frame = 0 Query: 130 PIAVLGARGKTGKLIVQQLLAQG-----KCVRALSYQPFEYDKKDIPSGVDVSSLLTYAIGDVTKPETLSPAIKGASAVIFAASASKNGGKAQAVDCDGVENIARSCIAEKIPRLLVISSGAVTKPDSFGYKVTNLFARGIMGLKLEGENRLRALYASSAPPGVTYTVLRPGGLSNDKGLGVSGIELNQKDTIIGEISRVDVAATXXXXXXXXXXXXXXFEVYEIGRRTPLQKEFPE 362 P+ VLGA GKTGK +V LL +G VR + + + + P+ D LLT DVTKP+TL+ +A++CIA + RL+VISS VT+PDSF +K TNLF IM K +GE RLR +Y +YT++RPGGL + K G++ + Q DT +I R D+A FE+YE + P+QKEF + Sbjct: 87 PVVVLGATGKTGKEVVNTLLRKGGYGIRAAVRGEATKEM-FGASEYPA--DDIDLLTGV--DVTKPDTLT-------------------------------EVAKACIAAGVERLVVISSLGVTRPDSFAFKFTNLFG-NIMDYKEQGEERLREIYKGQTK--CSYTIIRPGGLQSGKPKGLNNLVAVQGDTGYSDIDRADLAEVAVASIFYPETSFTTFELYERNAK-PIQKEFKD 283
BLAST of NO12G03540 vs. NCBI_GenBank
Match: OEU12750.1 (hypothetical protein FRACYDRAFT_164301, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 105.1 bits (261), Expect = 4.800e-19 Identity = 60/118 (50.85%), Postives = 78/118 (66.10%), Query Frame = 0 Query: 219 VDCDGVENIARSCIAEKIPRLLVISSGAVTKPDSFGYKVTNLFARGIMGLKLEGENRLRALYAS--------SAPPGV-TYTVLRPGGLSNDKGLGVSGIELNQKDTIIGEISRVDVA 328 VD G++N+A +CIA IP L+++SSG V+KPDS YK N+F GIM K++GE+ +R +YA+ GV TYT++RPGGL+ D GVS IELNQ DT G ISR DVA Sbjct: 3 VDNLGLQNVATACIANNIPHLVIVSSGGVSKPDSPVYKFLNIFG-GIMEEKIKGEDTIREMYANLDNNNKDDKQQGGVLTYTIIRPGGLTEDPIRGVSDIELNQGDTRSGRISRYDVA 119
BLAST of NO12G03540 vs. NCBI_GenBank
Match: XP_001419247.1 (predicted protein, partial [Ostreococcus lucimarinus CCE9901] >ABO97540.1 predicted protein, partial [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 102.1 bits (253), Expect = 4.100e-18 Identity = 59/110 (53.64%), Postives = 71/110 (64.55%), Query Frame = 0 Query: 219 VDCDGVENIARSCIAEKIPRLLVISSGAVTKPDSFGYKVTNLFARGIMGLKLEGENRLRALYASSAPPGVTYTVLRPGGLSNDKGLGVSGIELNQKDTIIGEISRVDVAA 329 VD DGV AR+C+ + R +++SSGAV+KP S Y NLF GIM K+ GE+ +RALY PG YTV+RPGGLS D GV +ELNQ D I G ISR DVAA Sbjct: 3 VDRDGVITCARACLRAGVERFVIVSSGAVSKPASPVYIFLNLFG-GIMRNKILGEDAVRALYFDR--PGQFYTVVRPGGLSEDPARGVGALELNQGDEISGRISREDVAA 109
BLAST of NO12G03540 vs. NCBI_GenBank
Match: XP_005845666.1 (hypothetical protein CHLNCDRAFT_53733 [Chlorella variabilis] >EFN53564.1 hypothetical protein CHLNCDRAFT_53733 [Chlorella variabilis]) HSP 1 Score: 97.1 bits (240), Expect = 1.300e-16 Identity = 77/203 (37.93%), Postives = 107/203 (52.71%), Query Frame = 0 Query: 129 APIAVLGARGKTGKLIVQQLLAQGKCVRALSYQPFEY-DKKDIPSGVDVSSLLTYAIGDVTKPETLSPAIKGASAVIFAASASKNGGKAQAVDCDGVENIARSCIAEKIPRLLVISSGAVTKPDSFG--YKVTNLFARGIMGLKLEGENRLRALYASSAPPGVTYTVLRPGGLSNDKGLGVSGIELNQKDTIIGEISRVDVAA 329 AP+ VLGA G+TG V L +G VRA+ P +Y D GV+V GDV ++L ++GAS+VI+AAS S A+AVD DGV N+A + ++++SS V+ + + + N G+M K EGE RLR GV YTV+RPGGL N+ G + + + Q D G +SR DVAA Sbjct: 2 APVVVLGAGGRTGAECVSVLEQRGTPVRAVVRDPAKYRDTLGNRKGVEV------VAGDVGDMQSLREVVRGASSVIYAASGSSYWA-AKAVDRDGVANVAEAAKEAGGKHVVLVSSCLVSPHNRWNPIRLLLNSARWGLMDAKYEGEERLRR-------SGVPYTVVRPGGLVNEPA-GQAQLVVAQGDNQSGRVSRADVAA 189
BLAST of NO12G03540 vs. NCBI_GenBank
Match: GAQ84203.1 (hypothetical protein KFL_001800110 [Klebsormidium nitens]) HSP 1 Score: 95.5 bits (236), Expect = 3.800e-16 Identity = 62/179 (34.64%), Postives = 94/179 (52.51%), Query Frame = 0 Query: 177 SSLLTYAIGDVTKPETLSPAIKGASAVIFAASASK---------NGGKAQAVDCDGVENIARSCIAEKIPRLLVISSGAVTKPDSFGYKVTNLFARGIMGLKLEGENRLRALYASSAPPGVTYTVLRPGGLSNDKGLGVSGIELNQKDTIIGEISRVDVAATXXXXXXXXXXXXXXFEV 347 +S + + GDVT P+ L A G AV+ A A + + + VD +GV ++ + A ++PR ++ISS AVT+P SF + + N A ++ KL GEN LR Y G+ Y V+RPGGL++++G +GI ++Q D +G +SR DVAA FEV Sbjct: 55 ASRVKFVTGDVTNPDALQSACAGKDAVVCAVGARQGWRLPLFGLDQQTPRKVDFEGVTHLVSAAAAARVPRFVLISSAAVTRPFSFIHILLNTMAGRVLHWKLLGENYLRKTYGRD---GLGYYVIRPGGLNDNEG-AKAGIIMDQGDKTLGMVSRADVAAVAVGCLEGLSPDNVTFEV 229 The following BLAST results are available for this feature:
BLAST of NO12G03540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G03540 ID=NO12G03540|Name=NO12G03540|organism=Nannochloropsis oceanica|type=gene|length=1164bpback to top protein sequence of NO12G03540.1 >NO12G03540.1-protein ID=NO12G03540.1-protein|Name=NO12G03540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=388bpback to top Synonyms
Publications
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