NO12G03500, NO12G03500 (gene) Nannochloropsis oceanica

Overview
NameNO12G03500
Unique NameNO12G03500
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2244
Alignment locationchr12:958678..960921 +

Link to JBrowse

Properties
Property NameValue
DescriptionEukaryotic translation initiation factor 3 subunit B
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:958678..960921 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003743translation initiation factor activity
GO:0031369translation initiation factor binding
GO:0003676nucleic acid binding
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR011400EIF3B
IPR000504RRM_dom
IPR013979TIF_beta_prop-like
Homology
BLAST of NO12G03500 vs. NCBI_GenBank
Match: EWM25691.1 (eukaryotic translation initiation factor 3 [Nannochloropsis gaditana])

HSP 1 Score: 1201.8 bits (3108), Expect = 0.000e+0
Identity = 611/748 (81.68%), Postives = 665/748 (88.90%), Query Frame = 0
Query:    1 MPGEDYDNDYGEQLDSLATIDEELKGYLSEGPTDWVEPVYEPDYSTAIVVDNLPKVPKDKYEKLLGYVRKIYQQIGPLAEDGLQMPVDDATGMTQGYAFINFFARDSAEKAIAATNNWNFDKAHALKVNSYVDLVRTMAHPETYTPQPARPLTTVPGLYAWLKDAQFRDQFVVRHGRDTEVFWAEAGGTPELVYGGEREKAAGQGRFWCDQYVAWSKTGAYLLTYHRQGVALWGGPNFEKVARLAHHGVALAHFSNTDRYLVTYSYPQVPGDGPGHVVVWDVERSISVQQQVALRSWPVEPYGKGNYFKWSHDDKYIAVGKSAYLRNPQAAQAAMDESGGGGGLPGHQKQVSMGGVGGDGVMDDVEGQISVFEVPSMELLDRKSIRAEGLRGWDWCPKSNLLAYWAPEKQQQPARVVLVELPSKKEVRRKPLFHVEDCALTWQNEGEYLCAKVTHKKRQSKKKVSLELFRIKEAGIALEMVELDPTPVQDFAWEPAGHRFALLHGEDA--HPFTVSFYSMLQPVTGQKEVTLLHRLESPKARTVNKLLWSPNGSIIVLANLTEGSTLEFYDVDTQSSLAKRDDLSRIDYLKWDPSGRYLTDAIQQPMGNSYYKYSYDNGFRVWTFQGTLIAHIEKPQFYMFQWRPRPPSLLTAEQQRKVKKDLRKYERRFDXXXXXXXXXXXXXXXXXXXXXXXXFRSFYARXXXEMMARKEELIALQKGYDDEDPDNYEVRVVTRRMVPLGEPEMAG 747
            M GEDY++ Y +       IDEELKGY+SEG TDW EPVYEPD+STAIVVDNLPKV ++KY++L+ +VRKIY Q+G +AEDGLQMP+D+ATGMT G+AFINF  RDSAEKAIAATNNWN DKAHALKVNSYVDLV+T  HPETYTP+PARPLTTVPGLY WLKDAQ+RDQFVVRHGRDTEV+WAE GGTPELVYGGEREKA GQGR+WCDQYV WSKTGAYLLTYHRQGVALWGGP FEKVARLAHHGVALA FSNTDRYLVTYSYP    DGPGHVVVWDVERSIS+Q+QVALRSWPVEP+GKGN+FKWSHDDKYIAVGKS YLRNPQAAQA +DESGGGG   GH KQ S G   G+G  +D EGQISVFE PSMELLDRKSIRAEGLRG+DWCPK NL+AYWAPE+QQQPARVVLVELPSKKEVRRKPLF+VEDC LTWQNEGEYLCA+VTHKKRQSKKKVSLELFR+KEAGIALEMVE+D TPV+DFAWEPAGHRFA++HG+DA  + F+VSFYSM+ P TGQKEVTLL+RLE  KAR VNKLLWSPNGSIIVLA L E S+LEFYDVD+ S+LAKRDDLSRIDYLKWDPSGRYLTDAIQQPMGNSYYKYSYDNGFR+WTFQGTLIAH+EK QFYMFQWRPRPPSLLTAEQQRKVKKDLRK      XXXXXXXXXXXXXXXXXXXXXXXX       XXX     K EL+ALQKGYDDE+ +NYE+RVVTRRMVPLG+PE+AG
Sbjct:   36 MAGEDYEHHYSD-----VPIDEELKGYISEGRTDWEEPVYEPDFSTAIVVDNLPKVSREKYDRLMVFVRKIYDQVGKIAEDGLQMPLDEATGMTLGFAFINFLTRDSAEKAIAATNNWNLDKAHALKVNSYVDLVKTTTHPETYTPEPARPLTTVPGLYDWLKDAQYRDQFVVRHGRDTEVYWAEPGGTPELVYGGEREKAMGQGRYWCDQYVTWSKTGAYLLTYHRQGVALWGGPKFEKVARLAHHGVALAQFSNTDRYLVTYSYPD---DGPGHVVVWDVERSISIQEQVALRSWPVEPFGKGNHFKWSHDDKYIAVGKSKYLRNPQAAQAGLDESGGGGA--GHVKQGSTGAGVGEGGPEDGEGQISVFEAPSMELLDRKSIRAEGLRGFDWCPKDNLIAYWAPERQQQPARVVLVELPSKKEVRRKPLFYVEDCELTWQNEGEYLCAQVTHKKRQSKKKVSLELFRVKEAGIALEMVEIDATPVRDFAWEPAGHRFAIIHGDDANSYRFSVSFYSMIHPTTGQKEVTLLYRLEGQKARPVNKLLWSPNGSIIVLAKLAEASSLEFYDVDSHSTLAKRDDLSRIDYLKWDPSGRYLTDAIQQPMGNSYYKYSYDNGFRMWTFQGTLIAHVEKNQFYMFQWRPRPPSLLTAEQQRKVKKDLRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAELVALQKGYDDEELENYEIRVVTRRMVPLGDPELAG 773          
BLAST of NO12G03500 vs. NCBI_GenBank
Match: XP_024579063.1 (eukaryotic translation initiation factor 3 subunit b [Plasmopara halstedii] >CEG42694.1 eukaryotic translation initiation factor 3 subunit b [Plasmopara halstedii])

HSP 1 Score: 482.3 bits (1240), Expect = 2.800e-132
Identity = 283/716 (39.53%), Postives = 385/716 (53.77%), Query Frame = 0
Query:   21 DEELKGYLSEGPTDWVEPVYEPDYSTAIVVDNLPKVPKDKYEKLLGYVRKIYQQIGPLAEDGLQMPVDDATGMTQGYAFINFFARDSAEKAIAATNNWNFDKAHALKVNSYVDLVRTMAHPETYTPQPARPLTTVPGLYAWLKDAQFRDQFVVRHGRDTEVFWAEAGGTPELVYGGEREKAAGQGRFWCDQYVAWSKTGAYLLTYHRQGVALWGGPNFEKVARLAHHGVALAHFSNTDRYLVTYSYPQVPGDGPGHVVVWDVERSISVQQQVALRSWPVE---PYGKGNYFKWSHDDKYIA-VGKSAYLRNPQAAQAAMDESGGGGGLPGHQKQVSMGGVGGDGVMDDVEGQISVFEVPSMELLDRKSIRAEGLRGWDWCPKSNLLAYWAPEKQQQPARVVLVELPSKKEVRRKPLFHVEDCALTWQNEGEYLCAKVT-HKKRQSKKKVSLELFRIKEAGIALEMVELDPTPVQDFAWEPAGHRFALLHGEDAHPFTVSFYSMLQPVTGQKEVTLLHRLESPKARTVNKLLWSPNGSIIVLANLTE-GSTLEFYDVDTQSSLAKRDDLSRIDYLKWDPSGRYLTDAIQQPMGNSYYKYSYDNGFRVWTFQGTLIAHIEKPQFYMFQWRPRPPSLLTAEQQRKVKKDLRKYERRFDXXXXXXXXXXXXXXXXXXXXXXXXFRSFYARXXXEMMARKEELIALQKGYDDEDPDNYEVR 731
            DEEL+  ++    +  E  +  DYS AIVV  LP V + K+ KLL  V+KI+ Q+G + +  +Q+P  D++G T G+AFI +     A  A+   NN+  DK H + VN Y D+ R +  PE + P           L  WL D   RD FV+RHG +TE+FW++ G   EL Y G+REK    G+ WC QYV WS  G+YL T+H QG+ALWGG  +EKV R AH  V LA FS  ++YL+T S      +    +++WDV+ S  ++   A +S  V+     G    FKWS DDK++A  GK                                               ISV+E+PSM+LLD+KS+RAEG+  + W P   +LAYWAPE    PARV LVELPS++EVR+K LF+V DC L W   G +LC KVT H K +     + ELFR+ E  + +EM+E+    V  FAWEP G RFA +HGE      VSFY M       KEVTLL+ L     +  + L WSP G+ IVLA L E    LEF+DV  Q S+  ++   +  +++WDPSGR +  A+ QP+ NSYYK++ DNG+ +WTFQG  +   +K  FY F WRPRP +LL+  +   V K+L+ +E+RFD                        F+    R      AR+ E IAL  GYD +D   Y V+
Sbjct:   26 DEELEDEMTTKAHE--EADFANDYSMAIVVGGLPVVDESKHGKLLNVVKKIFGQVGNVVD--IQVPF-DSSGKTTGFAFIEYEQEAHANDAVRTINNFALDKRHTMIVNKYEDMERYVKTPEEFIPPTINSFVEPKNLKTWLMDPARRDMFVLRHGSETEIFWSDKGEL-ELDYAGDREKK--NGKQWCSQYVLWSPQGSYLATFHPQGIALWGGEKYEKVGRFAHKNVKLAVFSPHEKYLITLS----ETEQEAAIIIWDVQTSKMLRAFPAGKSTGVKGEVVQGLMTPFKWSADDKFVARRGKDV---------------------------------------------ISVYELPSMKLLDKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMFTNFELFRVHEQLVPVEMLEMKDNIVA-FAWEPKGTRFATVHGEGQQRLNVSFYDMDGGSKSSKEVTLLYTLTD---KACSHLYWSPLGNNIVLAGLGEINGQLEFWDVSEQQSITIQEHF-KCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKETFYQFLWRPRPRTLLSESEYNHVVKNLKTFEKRFDQMDRLKERERLAALNAERKREEQEFQELLDRRLAIAAARRAEYIALLDGYDSQDESEYIVQ 679          
BLAST of NO12G03500 vs. NCBI_GenBank
Match: ETL87527.1 (hypothetical protein L917_13308 [Phytophthora parasitica] >ETO69433.1 hypothetical protein F444_13994 [Phytophthora parasitica P1976] >ETP38668.1 hypothetical protein F442_13800 [Phytophthora parasitica P10297])

HSP 1 Score: 478.0 bits (1229), Expect = 5.300e-131
Identity = 278/700 (39.71%), Postives = 373/700 (53.29%), Query Frame = 0
Query:   43 DYSTAIVVDNLPKVPKDKYEKLLGYVRKIYQQIGPLAEDGLQMPVDDATGMTQGYAFINFFARDSAEKAIAATNNWNFDKAHALKVNSYVDLVRTMAHPETYTPQPARPLTTVPGLYAWLKDAQFRDQFVVRHGRDTEVFWAEAGGTPELVYGGEREKAAGQGRFWCDQYVAWSKTGAYLLTYHRQGVALWGGPNFEKVARLAHHGVALAHFSNTDRYLVTYSYPQVPGDGPGHVVVWDVERSISVQQQVALRSWPV-EPYG-KGNY-------FKWSHDDKYIA-VGKSAYLRNPQAAQAAMDESGGGGGLPGHQKQVSMGGVGGDGVMDDVEGQISVFEVPSMELLDRKSIRAEGLRGWDWCPKSNLLAYWAPEKQQQPARVVLVELPSKKEVRRKPLFHVEDCALTWQNEGEYLCAKVT-HKKRQSKKKVSLELFRIKEAGIALEMVELDPTPVQDFAWEPAGHRFALLHGEDAHPFTVSFYSMLQPVTGQKEVTLLHRLESPKARTVNKLLWSPNGSIIVLANLTE-GSTLEFYDVDTQSSLAKRDDLSRIDYLKWDPSGRYLTDAIQQPMGNSYYKYSYDNGFRVWTFQGTLIAHIEKPQFYMFQWRPRPPSLLTAEQQRKVKKDLRKYERRFDXXXXXXXXXXXXXXXXXXXXXXXXFRSFYARXXXEMMARKEELIALQKGYDDEDPDNYEVR 731
            DYS A+VV  LP V + K+ KLL  V+KI+ Q+G + +  + MP   A G T G+AF+ +     A  A+   NN+  DK H + VN Y D+ R    P  + P           L  WL D   RD FV+RHG +TE+FW++ G   EL Y G+REK    G+ WC QYV WS  G YL T+H QG+ALWGG  +EKV R AH  V LA FS  + YL+T S      +    +++WDV+ S        LR++P  +P G KG         FKWS DDKY+A  GK                                               IS++E+PSM+LL++KS+RAEG+  + W P   +LAYWAPE    PARV LVELPS++EVR+K LF+V DC L W   G +LC KVT H K +     + ELFR++E  + +EM+E+    V  FAWEP G RFA +HGE      VSFY M       KEVTLL+ L   K +  + L WSP G+ IVLA L E    LEF+D   Q S+  ++   +  +++WDPSGR +  A+ QP+ NSYYK++ DNG+ +WTFQG  +   +K  FY F WRPRP +LL+ ++   V K+L+K+E+RFD                        F+    +      AR+ E IAL  GYD ED   Y V+
Sbjct:   46 DYSMAVVVGGLPVVDEAKHGKLLNVVKKIFGQVGTVVD--IHMPF-GANGKTTGFAFVEYEQEAHANDAVRTINNFALDKRHTMLVNKYEDIERYQKTPTEFVPPKVEKFVEPKNLKTWLMDPARRDMFVLRHGSETEIFWSDKGEL-ELDYAGDREKK--NGKQWCSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVKLAVFSPNENYLITLS----ETEQESAIIIWDVKTS------KMLRAFPAGKPTGAKGEVVQGLMTPFKWSADDKYVARRGKDV---------------------------------------------ISIYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMYTNFELFRVQEQLVPVEMLEVKENIVA-FAWEPKGTRFATVHGEGQQRLNVSFYDMDGGNKAAKEVTLLYTL---KDKACSHLYWSPLGNNIVLAGLGEINGQLEFWDATEQQSITVQEHF-KCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKDAFYQFLWRPRPRTLLSEKEYNNVVKNLKKFEKRFDQMDRLKERERLAAEKAERNRKEQEFQELLQKRLATAAARRAEYIALLDGYDSEDESEYIVQ 679          
BLAST of NO12G03500 vs. NCBI_GenBank
Match: KUF86194.1 (Eukaryotic translation initiation factor 3 subunit B [Phytophthora nicotianae])

HSP 1 Score: 478.0 bits (1229), Expect = 5.300e-131
Identity = 278/700 (39.71%), Postives = 373/700 (53.29%), Query Frame = 0
Query:   43 DYSTAIVVDNLPKVPKDKYEKLLGYVRKIYQQIGPLAEDGLQMPVDDATGMTQGYAFINFFARDSAEKAIAATNNWNFDKAHALKVNSYVDLVRTMAHPETYTPQPARPLTTVPGLYAWLKDAQFRDQFVVRHGRDTEVFWAEAGGTPELVYGGEREKAAGQGRFWCDQYVAWSKTGAYLLTYHRQGVALWGGPNFEKVARLAHHGVALAHFSNTDRYLVTYSYPQVPGDGPGHVVVWDVERSISVQQQVALRSWPV-EPYG-KGNY-------FKWSHDDKYIA-VGKSAYLRNPQAAQAAMDESGGGGGLPGHQKQVSMGGVGGDGVMDDVEGQISVFEVPSMELLDRKSIRAEGLRGWDWCPKSNLLAYWAPEKQQQPARVVLVELPSKKEVRRKPLFHVEDCALTWQNEGEYLCAKVT-HKKRQSKKKVSLELFRIKEAGIALEMVELDPTPVQDFAWEPAGHRFALLHGEDAHPFTVSFYSMLQPVTGQKEVTLLHRLESPKARTVNKLLWSPNGSIIVLANLTE-GSTLEFYDVDTQSSLAKRDDLSRIDYLKWDPSGRYLTDAIQQPMGNSYYKYSYDNGFRVWTFQGTLIAHIEKPQFYMFQWRPRPPSLLTAEQQRKVKKDLRKYERRFDXXXXXXXXXXXXXXXXXXXXXXXXFRSFYARXXXEMMARKEELIALQKGYDDEDPDNYEVR 731
            DYS A+VV  LP V + K+ KLL  V+KI+ Q+G + +  + MP   A G T G+AF+ +     A  A+   NN+  DK H + VN Y D+ R    P  + P           L  WL D   RD FV+RHG +TE+FW++ G   EL Y G+REK    G+ WC QYV WS  G YL T+H QG+ALWGG  +EKV R AH  V LA FS  + YL+T S      +    +++WDV+ S        LR++P  +P G KG         FKWS DDKY+A  GK                                               IS++E+PSM+LL++KS+RAEG+  + W P   +LAYWAPE    PARV LVELPS++EVR+K LF+V DC L W   G +LC KVT H K +     + ELFR++E  + +EM+E+    V  FAWEP G RFA +HGE      VSFY M       KEVTLL+ L   K +  + L WSP G+ IVLA L E    LEF+D   Q S+  ++   +  +++WDPSGR +  A+ QP+ NSYYK++ DNG+ +WTFQG  +   +K  FY F WRPRP +LL+ ++   V K+L+K+E+RFD                        F+    +      AR+ E IAL  GYD ED   Y V+
Sbjct:   46 DYSMAVVVGGLPVVDEAKHGKLLNVVKKIFGQVGTVVD--IHMPF-GANGKTTGFAFVEYEQEAHANDAVRTINNFALDKRHTMLVNKYEDIERYQKTPTEFVPPKVEKFVEPKNLKTWLMDPARRDMFVLRHGSETEIFWSDKGEL-ELDYAGDREKK--NGKQWCSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVKLAVFSPNENYLITLS----ETEQESAIIIWDVKTS------KMLRAFPAGKPTGAKGEVVQGLMTPFKWSADDKYVARRGKDV---------------------------------------------ISIYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMYTNFELFRVQEQLVPVEMLEVKENIVA-FAWEPKGTRFATVHGEGQQRLNVSFYDMDGGNKAAKEVTLLYTL---KDKACSHLYWSPLGNNIVLAGLGEINGQLEFWDATEQQSITVQEHF-KCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKDAFYQFLWRPRPRTLLSXKEYNNVVKNLKKFEKRFDQMDRLKERERLAAEKAERNRKEQEFQELLQKRLATAAARRAEYIALLDGYDSEDESEYIVQ 679          
BLAST of NO12G03500 vs. NCBI_GenBank
Match: XP_008909403.1 (hypothetical protein PPTG_14168 [Phytophthora parasitica INRA-310] >ETI40733.1 hypothetical protein F443_13965 [Phytophthora parasitica P1569] >ETM40747.1 hypothetical protein L914_13400 [Phytophthora parasitica] >ETN05428.1 hypothetical protein PPTG_14168 [Phytophthora parasitica INRA-310])

HSP 1 Score: 477.6 bits (1228), Expect = 6.900e-131
Identity = 278/700 (39.71%), Postives = 373/700 (53.29%), Query Frame = 0
Query:   43 DYSTAIVVDNLPKVPKDKYEKLLGYVRKIYQQIGPLAEDGLQMPVDDATGMTQGYAFINFFARDSAEKAIAATNNWNFDKAHALKVNSYVDLVRTMAHPETYTPQPARPLTTVPGLYAWLKDAQFRDQFVVRHGRDTEVFWAEAGGTPELVYGGEREKAAGQGRFWCDQYVAWSKTGAYLLTYHRQGVALWGGPNFEKVARLAHHGVALAHFSNTDRYLVTYSYPQVPGDGPGHVVVWDVERSISVQQQVALRSWPV-EPYG-KGNY-------FKWSHDDKYIA-VGKSAYLRNPQAAQAAMDESGGGGGLPGHQKQVSMGGVGGDGVMDDVEGQISVFEVPSMELLDRKSIRAEGLRGWDWCPKSNLLAYWAPEKQQQPARVVLVELPSKKEVRRKPLFHVEDCALTWQNEGEYLCAKVT-HKKRQSKKKVSLELFRIKEAGIALEMVELDPTPVQDFAWEPAGHRFALLHGEDAHPFTVSFYSMLQPVTGQKEVTLLHRLESPKARTVNKLLWSPNGSIIVLANLTE-GSTLEFYDVDTQSSLAKRDDLSRIDYLKWDPSGRYLTDAIQQPMGNSYYKYSYDNGFRVWTFQGTLIAHIEKPQFYMFQWRPRPPSLLTAEQQRKVKKDLRKYERRFDXXXXXXXXXXXXXXXXXXXXXXXXFRSFYARXXXEMMARKEELIALQKGYDDEDPDNYEVR 731
            DYS A+VV  LP V + K+ KLL  V+KI+ Q+G + +  + MP   A G T G+AF+ +     A  A+   NN+  DK H + VN Y D+ R    P  + P           L  WL D   RD FV+RHG +TE+FW++ G   EL Y G+REK    G+ WC QYV WS  G YL T+H QG+ALWGG  +EKV R AH  V LA FS  + YL+T S      +    +++WDV+ S        LR++P  +P G KG         FKWS DDKY+A  GK                                               IS++E+PSM+LL++KS+RAEG+  + W P   +LAYWAPE    PARV LVELPS++EVR+K LF+V DC L W   G +LC KVT H K +     + ELFR++E  + +EM+E+    V  FAWEP G RFA +HGE      VSFY M       KEVTLL+ L   K +  + L WSP G+ IVLA L E    LEF+D   Q S+  ++   +  +++WDPSGR +  A+ QP+ NSYYK++ DNG+ +WTFQG  +   +K  FY F WRPRP +LL+ ++   V K+L+K+E+RFD                        F+    +      AR+ E IAL  GYD ED   Y V+
Sbjct:   46 DYSMAVVVGGLPVVDEAKHGKLLNVVKKIFGQVGTVVD--IHMPF-GANGKTTGFAFVEYEQEAHANDAVRTINNFALDKRHTMLVNKYEDIERYQKTPTEFVPPKVEKFVEPKNLKTWLMDPARRDMFVLRHGSETEIFWSDKGEL-ELDYAGDREKK--NGKQWCSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVKLAVFSPNENYLITLS----ETEQESAIIIWDVKTS------KMLRAFPAGKPTGAKGEVVQGLMTPFKWSADDKYVARRGKDV---------------------------------------------ISIYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMYTNFELFRVQEQLVPVEMLEVKENIVA-FAWEPKGTRFATVHGEGQQRLNVSFYDMDGGNKAAKEVTLLYTL---KDKACSHLYWSPLGNNIVLAGLGEINGQLEFWDATEQQSITVQEHF-KCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKDAFYQFLWRPRPRTLLSDKEYNNVVKNLKKFEKRFDQMDRLKERERLAAEKAERNRKEQEFQELLQKRLATAAARRAEYIALLDGYDSEDESEYIVQ 679          
BLAST of NO12G03500 vs. NCBI_GenBank
Match: XP_002998590.1 (eukaryotic translation initiation factor 3 subunit, putative [Phytophthora infestans T30-4] >EEY69943.1 eukaryotic translation initiation factor 3 subunit, putative [Phytophthora infestans T30-4])

HSP 1 Score: 477.2 bits (1227), Expect = 9.000e-131
Identity = 273/694 (39.34%), Postives = 371/694 (53.46%), Query Frame = 0
Query:   43 DYSTAIVVDNLPKVPKDKYEKLLGYVRKIYQQIGPLAEDGLQMPVDDATGMTQGYAFINFFARDSAEKAIAATNNWNFDKAHALKVNSYVDLVRTMAHPETYTPQPARPLTTVPGLYAWLKDAQFRDQFVVRHGRDTEVFWAEAGGTPELVYGGEREKAAGQGRFWCDQYVAWSKTGAYLLTYHRQGVALWGGPNFEKVARLAHHGVALAHFSNTDRYLVTYSYPQVPGDGPGHVVVWDVERSISVQQQVALRSWPVE---PYGKGNYFKWSHDDKYIA-VGKSAYLRNPQAAQAAMDESGGGGGLPGHQKQVSMGGVGGDGVMDDVEGQISVFEVPSMELLDRKSIRAEGLRGWDWCPKSNLLAYWAPEKQQQPARVVLVELPSKKEVRRKPLFHVEDCALTWQNEGEYLCAKVT-HKKRQSKKKVSLELFRIKEAGIALEMVELDPTPVQDFAWEPAGHRFALLHGEDAHPFTVSFYSMLQPVTGQKEVTLLHRLESPKARTVNKLLWSPNGSIIVLANLTE-GSTLEFYDVDTQSSLAKRDDLSRIDYLKWDPSGRYLTDAIQQPMGNSYYKYSYDNGFRVWTFQGTLIAHIEKPQFYMFQWRPRPPSLLTAEQQRKVKKDLRKYERRFDXXXXXXXXXXXXXXXXXXXXXXXXFRSFYARXXXEMMARKEELIALQKGYDDEDPDNYEVR 731
            DYS A+VV  LP + K K+ KLL  V+KI+ Q+G + +  +QMP   A G T G+AF+ +     A  A+   NN+  DK H + VN Y D+ R    P  +             L  WL D   RD FV+RHG +TE+FW++ G   EL Y G+REK    G+ WC QYV WS  G YL T+H QG+ALWGG  +EKV R AH  V LA FS  + YL+T S      +    +++WDV+ S  ++   A +S   +     G    FKWS D+KY+A  GK                                               IS++E+PSM+LL++KS+RAEG+  + W P   +LAYWAPE    PARV LVELPS++EVR+K LF+V DC L W + G +LC KVT H K +     + ELFR+++  + +EM+E+    V  FAWEP G RFA +HGE      VSFY M       KEVTLL+ L   K +  + L WSP G+ IVLA L E    LEF+D   Q S+  ++   +  +++WDPSGR +  A+ QP+ NSYYK++ DNG+ +WTFQG  +   +K  FY F WRPRP +LL+ +Q   V K+L+K+E+RFD                        F+    +      AR+ E IAL  GYD ED   Y V+
Sbjct:   46 DYSMAVVVGGLPVIDKTKHGKLLNVVKKIFGQVGTVVD--IQMPF-GANGKTTGFAFVEYEQEAHANDAVRTINNFALDKRHTMLVNRYEDIERYQKTPTEFVAPKVEKFVEPKNLKTWLTDPARRDMFVLRHGSETEIFWSDKGEL-ELDYAGDREKT--NGKQWCSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVKLAVFSPNENYLITLS----ETEQDAAIIIWDVKTSKMLRAFPAGKSSGEKGEVVQGLMTPFKWSADEKYVARRGKDV---------------------------------------------ISIYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHSNGTFLCVKVTRHSKSKKTMYTNFELFRVQDQQVPVEMLEVKENIVA-FAWEPKGTRFATVHGEGQQRLNVSFYDMDGGSKAAKEVTLLYTL---KDKACSHLYWSPLGNNIVLAGLGEINGQLEFWDATEQQSITVQEHF-KCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKDAFYQFLWRPRPRTLLSDKQYNNVVKNLKKFEKRFDQMDRLKERERLSAEKAERNRKEQEFQDLLQKRLVTAAARRAEYIALLDGYDSEDESEYIVQ 679          
BLAST of NO12G03500 vs. NCBI_GenBank
Match: ETK80824.1 (hypothetical protein L915_13602 [Phytophthora parasitica] >ETL34241.1 hypothetical protein L916_13499 [Phytophthora parasitica] >ETP10487.1 hypothetical protein F441_13889 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 476.5 bits (1225), Expect = 1.500e-130
Identity = 277/700 (39.57%), Postives = 373/700 (53.29%), Query Frame = 0
Query:   43 DYSTAIVVDNLPKVPKDKYEKLLGYVRKIYQQIGPLAEDGLQMPVDDATGMTQGYAFINFFARDSAEKAIAATNNWNFDKAHALKVNSYVDLVRTMAHPETYTPQPARPLTTVPGLYAWLKDAQFRDQFVVRHGRDTEVFWAEAGGTPELVYGGEREKAAGQGRFWCDQYVAWSKTGAYLLTYHRQGVALWGGPNFEKVARLAHHGVALAHFSNTDRYLVTYSYPQVPGDGPGHVVVWDVERSISVQQQVALRSWPV-EPYG-KGNY-------FKWSHDDKYIA-VGKSAYLRNPQAAQAAMDESGGGGGLPGHQKQVSMGGVGGDGVMDDVEGQISVFEVPSMELLDRKSIRAEGLRGWDWCPKSNLLAYWAPEKQQQPARVVLVELPSKKEVRRKPLFHVEDCALTWQNEGEYLCAKVT-HKKRQSKKKVSLELFRIKEAGIALEMVELDPTPVQDFAWEPAGHRFALLHGEDAHPFTVSFYSMLQPVTGQKEVTLLHRLESPKARTVNKLLWSPNGSIIVLANLTE-GSTLEFYDVDTQSSLAKRDDLSRIDYLKWDPSGRYLTDAIQQPMGNSYYKYSYDNGFRVWTFQGTLIAHIEKPQFYMFQWRPRPPSLLTAEQQRKVKKDLRKYERRFDXXXXXXXXXXXXXXXXXXXXXXXXFRSFYARXXXEMMARKEELIALQKGYDDEDPDNYEVR 731
            DYS A+VV  LP V + K+ KLL  V+KI+ Q+G + +  + MP   A G T G+AF+ +     A  A+   NN+  DK H + VN Y D+ R    P  + P           L  WL D   RD FV+RHG +TE+FW++ G   +L Y G+REK    G+ WC QYV WS  G YL T+H QG+ALWGG  +EKV R AH  V LA FS  + YL+T S      +    +++WDV+ S        LR++P  +P G KG         FKWS DDKY+A  GK                                               IS++E+PSM+LL++KS+RAEG+  + W P   +LAYWAPE    PARV LVELPS++EVR+K LF+V DC L W   G +LC KVT H K +     + ELFR++E  + +EM+E+    V  FAWEP G RFA +HGE      VSFY M       KEVTLL+ L   K +  + L WSP G+ IVLA L E    LEF+D   Q S+  ++   +  +++WDPSGR +  A+ QP+ NSYYK++ DNG+ +WTFQG  +   +K  FY F WRPRP +LL+ ++   V K+L+K+E+RFD                        F+    +      AR+ E IAL  GYD ED   Y V+
Sbjct:   46 DYSMAVVVGGLPVVDEAKHGKLLNVVKKIFGQVGTVVD--IHMPF-GANGKTTGFAFVEYEQEAHANDAVRTINNFALDKRHTMLVNKYEDIERYQKTPTEFVPPKVEKFVEPKNLKTWLMDPARRDMFVLRHGSETEIFWSDKGEL-DLDYAGDREKK--NGKQWCSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVKLAVFSPNENYLITLS----ETEQESAIIIWDVKTS------KMLRAFPAGKPTGAKGEVVQGLMTPFKWSADDKYVARRGKDV---------------------------------------------ISIYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMYTNFELFRVQEQLVPVEMLEVKENIVA-FAWEPKGTRFATVHGEGQQRLNVSFYDMDGGNKAAKEVTLLYTL---KDKACSHLYWSPLGNNIVLAGLGEINGQLEFWDATEQQSITVQEHF-KCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKDAFYQFLWRPRPRTLLSDKEYNNVVKNLKKFEKRFDQMDRLKERERLAAEKAERNRKEQEFQELLQKRLATAAARRAEYIALLDGYDSEDESEYIVQ 679          
BLAST of NO12G03500 vs. NCBI_GenBank
Match: OWZ23713.1 (Eukaryotic translation initiation factor 3 subunit [Phytophthora megakarya])

HSP 1 Score: 474.9 bits (1221), Expect = 4.500e-130
Identity = 273/696 (39.22%), Postives = 372/696 (53.45%), Query Frame = 0
Query:   43 DYSTAIVVDNLPKVPKDKYEKLLGYVRKIYQQIGPLAEDGLQMPVDDATGMTQGYAFINFFARDSAEKAIAATNNWNFDKAHALKVNSYVDLVRTMAHPETYTPQPARPLTTVPGLYAWLKDAQFRDQFVVRHGRDTEVFWAEAGGTPELVYGGEREKAAGQGRFWCDQYVAWSKTGAYLLTYHRQGVALWGGPNFEKVARLAHHGVALAHFSNTDRYLVTYSYPQVPGDGPGHVVVWDVE-----RSISVQQQVALRSWPVEPYGKGNYFKWSHDDKYIA-VGKSAYLRNPQAAQAAMDESGGGGGLPGHQKQVSMGGVGGDGVMDDVEGQISVFEVPSMELLDRKSIRAEGLRGWDWCPKSNLLAYWAPEKQQQPARVVLVELPSKKEVRRKPLFHVEDCALTWQNEGEYLCAKVT-HKKRQSKKKVSLELFRIKEAGIALEMVELDPTPVQDFAWEPAGHRFALLHGEDAHPFTVSFYSMLQPVTGQKEVTLLHRLESPKARTVNKLLWSPNGSIIVLANLTE-GSTLEFYDVDTQSSLAKRDDLSRIDYLKWDPSGRYLTDAIQQPMGNSYYKYSYDNGFRVWTFQGTLIAHIEKPQFYMFQWRPRPPSLLTAEQQRKVKKDLRKYERRFDXXXXXXXXXXXXXXXXXXXXXXXXFRSFYARXXXEMMARKEELIALQKGYDDEDPDNYEVR 731
            DYS A+VV  LP V + K+ KLL  V+KI+ Q+G + +  + MP   A G T G+AF+ + +   A  A+   NN+  DK H + VN Y D+ +    P  +             L  WL D   RD FV+RHG +TE+FW++ G   EL Y G+REK    G+ WC QYV WS  G YL T+H QG+ALWGG  +EKV R AH  V LA FS  + YL+T S      +    +++WDV+     R+    +Q   +   V+  G    FKWS DDKY+A  GK                                               ISV+E+PSM+LL++KS+RAEG+  + W P   +LAYWAPE    PARV LVELPS++EVR+K LF+V DC L W   G +LC KVT H K +     + ELFR++E  + +EM+E+    V  FAWEP G RFA +HGE      VSFY M       KEVTLL+ L   K +  + L WSP G+ IVLA L E    LEF+D   Q S+  ++   +  +++WDPSGR +  A+ QP+ NSYYK++ DNG+ +WTFQG  +   +K  FY F WRPRP +LL+ ++ + V K+L+K+E+RFD                        F+    +      AR+ E IAL  GYD ED + Y V+
Sbjct:   46 DYSMAVVVGGLPVVDEAKHGKLLNVVKKIFGQVGTVVD--IHMPF-GANGKTTGFAFVEYESEAHANDAVRTINNFALDKRHTMLVNKYEDIEKFQKTPADFVAPKVEKFAEPKNLKTWLTDPARRDMFVLRHGSETEIFWSDKGEI-ELDYAGDREKK--NGKQWCSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVKLAVFSPNESYLITVS----ETEQESAIIIWDVKTSKMLRAFPAGKQTGAKGEIVQ--GLMTPFKWSADDKYVARRGKDV---------------------------------------------ISVYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMYTNFELFRVQEQLVPVEMLEVKDNIVA-FAWEPKGTRFATVHGEGQQRLNVSFYDMDGGSKAVKEVTLLYTL---KDKACSHLYWSPLGNNIVLAGLGEINGQLEFWDATEQQSITVQEHF-KCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKDAFYQFLWRPRPRTLLSEKEYKNVVKNLKKFEKRFDQMDRLKERERLAAEKAERNRQEQEFQDVVEKRLAAAAARRAEYIALLDGYDSEDENEYIVQ 679          
BLAST of NO12G03500 vs. NCBI_GenBank
Match: POM59049.1 (Eukaryotic translation initiation factor 3 subunit [Phytophthora palmivora var. palmivora])

HSP 1 Score: 474.6 bits (1220), Expect = 5.800e-130
Identity = 277/700 (39.57%), Postives = 373/700 (53.29%), Query Frame = 0
Query:   43 DYSTAIVVDNLPKVPKDKYEKLLGYVRKIYQQIGPLAEDGLQMPVDDATGMTQGYAFINFFARDSAEKAIAATNNWNFDKAHALKVNSYVDLVRTMAHPETYTPQPARPLTTVPGLYAWLKDAQFRDQFVVRHGRDTEVFWAEAGGTPELVYGGEREKAAGQGRFWCDQYVAWSKTGAYLLTYHRQGVALWGGPNFEKVARLAHHGVALAHFSNTDRYLVTYSYPQVPGDGPGHVVVWDVERSISVQQQVALRSWPV-EPYG-KGNY-------FKWSHDDKYIA-VGKSAYLRNPQAAQAAMDESGGGGGLPGHQKQVSMGGVGGDGVMDDVEGQISVFEVPSMELLDRKSIRAEGLRGWDWCPKSNLLAYWAPEKQQQPARVVLVELPSKKEVRRKPLFHVEDCALTWQNEGEYLCAKVT-HKKRQSKKKVSLELFRIKEAGIALEMVELDPTPVQDFAWEPAGHRFALLHGEDAHPFTVSFYSMLQPVTGQKEVTLLHRLESPKARTVNKLLWSPNGSIIVLANLTE-GSTLEFYDVDTQSSLAKRDDLSRIDYLKWDPSGRYLTDAIQQPMGNSYYKYSYDNGFRVWTFQGTLIAHIEKPQFYMFQWRPRPPSLLTAEQQRKVKKDLRKYERRFDXXXXXXXXXXXXXXXXXXXXXXXXFRSFYARXXXEMMARKEELIALQKGYDDEDPDNYEVR 731
            DYS A+VV  LP V   K+ KLL  V+KI+ Q+G + +  + MP   A G T G+AF+ + +   A  A+   NN+  DK H + VN Y D+ R    P  +             L  WL D   RD FV+RHG +TE+FW++ G   EL Y G+REK    G+ WC QYV WS  G YL T+H QG+ALWGG  +EKV R AH  V LA FS  + YL+T S      +    +++WDV+ S        LR++P  +P G KG         FKWS DDKY+A  GK                                               IS++E+PSM+LL++KS+RAEG+  + W P   +LAYWAPE    PARV LVELPS++EVR+K LF+V DC L W   G +LC KVT H K +     + ELFR++E  + +EM+E+    V  FAWEP G RFA +HGE      VSFY M       KEVTLL+ L   K +  + L WSP G+ IVLA L E    LEF+D   Q S+  ++   +  +++WDPSGR +  A+ QP+ NSYYK++ DNG+ +WTFQG  +   +K  FY F WRPRP +LL+ ++   V K+L+K+E+RFD                        F+    +      AR+ E IAL  GYD ED + Y V+
Sbjct:   46 DYSMAVVVGGLPVVDDTKHGKLLNVVKKIFGQVGTVVD--IHMPF-GANGKTTGFAFVEYESEAHANDAVRTINNFALDKRHTMLVNKYDDIERYQKTPAEFVSPKVEKFVEPKNLKTWLTDPARRDMFVLRHGSETEIFWSDKGEI-ELDYAGDREKT--NGKQWCSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVKLAVFSPNENYLITVS----ETEQESAIIIWDVKTS------KMLRAFPAGKPTGTKGEVVQGLMTPFKWSADDKYVARRGKDV---------------------------------------------ISIYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMYTNFELFRVQEQLVPVEMLEVKENIVA-FAWEPKGTRFATVHGEGQQRLNVSFYDMDGGSKTAKEVTLLYTL---KDKACSHLYWSPLGNNIVLAGLGEINGQLEFWDATEQQSITVQEHF-KCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKDAFYQFLWRPRPRTLLSDKEYNNVVKNLKKFEKRFDQMDRLKERERLAAEKAERNRKEQEFQEVLKKRLATAAARRAEYIALLDGYDSEDENEYIVQ 679          
BLAST of NO12G03500 vs. NCBI_GenBank
Match: POM69207.1 (Eukaryotic translation initiation factor 3 subunit [Phytophthora palmivora var. palmivora])

HSP 1 Score: 474.2 bits (1219), Expect = 7.600e-130
Identity = 277/700 (39.57%), Postives = 373/700 (53.29%), Query Frame = 0
Query:   43 DYSTAIVVDNLPKVPKDKYEKLLGYVRKIYQQIGPLAEDGLQMPVDDATGMTQGYAFINFFARDSAEKAIAATNNWNFDKAHALKVNSYVDLVRTMAHPETYTPQPARPLTTVPGLYAWLKDAQFRDQFVVRHGRDTEVFWAEAGGTPELVYGGEREKAAGQGRFWCDQYVAWSKTGAYLLTYHRQGVALWGGPNFEKVARLAHHGVALAHFSNTDRYLVTYSYPQVPGDGPGHVVVWDVERSISVQQQVALRSWPV-EPYG-KGNY-------FKWSHDDKYIA-VGKSAYLRNPQAAQAAMDESGGGGGLPGHQKQVSMGGVGGDGVMDDVEGQISVFEVPSMELLDRKSIRAEGLRGWDWCPKSNLLAYWAPEKQQQPARVVLVELPSKKEVRRKPLFHVEDCALTWQNEGEYLCAKVT-HKKRQSKKKVSLELFRIKEAGIALEMVELDPTPVQDFAWEPAGHRFALLHGEDAHPFTVSFYSMLQPVTGQKEVTLLHRLESPKARTVNKLLWSPNGSIIVLANLTE-GSTLEFYDVDTQSSLAKRDDLSRIDYLKWDPSGRYLTDAIQQPMGNSYYKYSYDNGFRVWTFQGTLIAHIEKPQFYMFQWRPRPPSLLTAEQQRKVKKDLRKYERRFDXXXXXXXXXXXXXXXXXXXXXXXXFRSFYARXXXEMMARKEELIALQKGYDDEDPDNYEVR 731
            DYS A+VV  LP V   K+ KLL  V+KI+ Q+G + +  + MP   A G T G+AF+ + +   A  A+   NN+  DK H + VN Y D+ R    P  +             L  WL D   RD FV+RHG +TE+FW++ G   EL Y G+REK    G+ WC QYV WS  G YL T+H QG+ALWGG  +EKV R AH  V LA FS  + YL+T S      +    +++WDV+ S        LR++P  +P G KG         FKWS DDKY+A  GK                                               IS++E+PSM+LL++KS+RAEG+  + W P   +LAYWAPE    PARV LVELPS++EVR+K LF+V DC L W   G +LC KVT H K +     + ELFR++E  + +EM+E+    V  FAWEP G RFA +HGE      VSFY M       KEVTLL+ L   K +  + L WSP G+ IVLA L E    LEF+D   Q S+  ++   +  +++WDPSGR +  A+ QP+ NSYYK++ DNG+ +WTFQG  +   +K  FY F WRPRP +LL+ ++   V K+L+K+E+RFD                        F+    +      AR+ E IAL  GYD ED + Y V+
Sbjct:   46 DYSMAVVVGGLPVVDDTKHGKLLNVVKKIFGQVGTVVD--IHMPF-GANGKTTGFAFVEYESEAHANDAVRTINNFALDKRHTMLVNKYDDIERYQKTPAEFVSPKVEKFVEPKNLKTWLTDPARRDMFVLRHGSETEIFWSDKGEI-ELDYAGDREKK--NGKQWCSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVKLAVFSPNENYLITVS----ETEQESAIIIWDVKTS------KMLRAFPAGKPTGTKGEVVQGLMTPFKWSADDKYVARRGKDV---------------------------------------------ISIYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMYTNFELFRVQEQLVPVEMLEVKENIVA-FAWEPKGTRFATVHGEGQQRLNVSFYDMDGGSKTAKEVTLLYTL---KDKACSHLYWSPLGNNIVLAGLGEINGQLEFWDATEQQSITVQEHF-KCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKDAFYQFLWRPRPRTLLSDKEYNNVVKNLKKFEKRFDQMDRLKERERLAAEKAERNRKEQEFQEVLKKRLATAAARRAEYIALLDGYDSEDENEYIVQ 679          
The following BLAST results are available for this feature:
BLAST of NO12G03500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25691.10.000e+081.68eukaryotic translation initiation factor 3 [Nannoc... [more]
XP_024579063.12.800e-13239.53eukaryotic translation initiation factor 3 subunit... [more]
ETL87527.15.300e-13139.71hypothetical protein L917_13308 [Phytophthora para... [more]
KUF86194.15.300e-13139.71Eukaryotic translation initiation factor 3 subunit... [more]
XP_008909403.16.900e-13139.71hypothetical protein PPTG_14168 [Phytophthora para... [more]
XP_002998590.19.000e-13139.34eukaryotic translation initiation factor 3 subunit... [more]
ETK80824.11.500e-13039.57hypothetical protein L915_13602 [Phytophthora para... [more]
OWZ23713.14.500e-13039.22Eukaryotic translation initiation factor 3 subunit... [more]
POM59049.15.800e-13039.57Eukaryotic translation initiation factor 3 subunit... [more]
POM69207.17.600e-13039.57Eukaryotic translation initiation factor 3 subunit... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010315NSK010315Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G03500.1NO12G03500.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592834gene_5525Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100279g4gene4822Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G03500.1NO12G03500.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G03500 ID=NO12G03500|Name=NO12G03500|organism=Nannochloropsis oceanica|type=gene|length=2244bp
ATGCCGGGCGAGGACTACGACAACGACTACGGCGAGCAGCTTGACTCACT
CGCCACCATCGATGAGGAGCTGAAGGGCTACCTCTCGGAAGGGCCAACCG
ATTGGGTGGAGCCCGTCTACGAGCCTGACTACTCCACCGCCATCGTCGTC
GACAACCTGCCCAAGGTCCCCAAAGACAAGTACGAGAAGCTCCTGGGCTA
TGTTCGAAAGATCTACCAGCAAATCGGACCCCTGGCCGAGGACGGTTTGC
AGATGCCCGTGGACGATGCGACTGGGATGACCCAAGGCTATGCCTTCATC
AACTTCTTCGCGCGCGACTCGGCCGAGAAAGCCATCGCCGCCACCAACAA
CTGGAACTTCGACAAGGCCCACGCTCTGAAAGTCAACAGCTACGTTGACT
TGGTCCGGACGATGGCGCATCCCGAAACCTATACCCCTCAGCCAGCGCGT
CCTTTAACGACGGTGCCGGGGCTGTATGCGTGGTTGAAGGATGCTCAGTT
CCGCGACCAGTTCGTGGTGCGCCACGGGAGAGACACTGAAGTATTCTGGG
CGGAGGCGGGAGGAACCCCCGAGTTGGTGTATGGAGGGGAGAGGGAGAAG
GCGGCGGGACAAGGGAGGTTTTGGTGTGACCAGTACGTGGCATGGAGTAA
AACGGGGGCTTACCTTCTGACCTACCACAGGCAGGGCGTTGCCCTGTGGG
GAGGCCCAAATTTCGAGAAAGTGGCACGATTGGCGCATCATGGTGTGGCG
CTTGCGCACTTTTCGAATACGGATCGGTACCTGGTCACGTATTCGTATCC
GCAAGTACCGGGGGATGGGCCCGGTCATGTGGTTGTGTGGGACGTGGAGA
GGTCCATCTCGGTGCAGCAGCAGGTTGCATTAAGATCCTGGCCTGTGGAG
CCTTATGGAAAAGGGAATTATTTCAAGTGGTCGCATGATGATAAATATAT
TGCGGTGGGAAAGAGTGCGTATCTGAGGAACCCTCAGGCAGCCCAAGCAG
CGATGGACGAGAGTGGAGGAGGAGGGGGCCTGCCAGGGCATCAGAAGCAG
GTGAGCATGGGGGGCGTTGGAGGAGATGGAGTGATGGATGATGTGGAGGG
TCAGATCAGCGTGTTTGAGGTTCCCAGTATGGAGTTGTTGGATCGGAAGT
CGATACGAGCCGAGGGACTGCGGGGTTGGGACTGGTGTCCCAAGTCGAAC
CTGCTCGCTTACTGGGCACCGGAGAAGCAGCAACAGCCGGCGAGGGTGGT
GTTGGTGGAATTGCCTAGCAAGAAAGAGGTGCGACGTAAGCCTTTGTTTC
ATGTGGAAGACTGCGCGCTGACGTGGCAGAATGAGGGGGAGTACCTGTGC
GCGAAAGTGACGCACAAGAAGCGCCAGTCCAAGAAAAAGGTTTCCCTGGA
GCTTTTCCGCATCAAGGAAGCAGGGATCGCCCTCGAAATGGTCGAGTTGG
ATCCCACTCCTGTCCAGGATTTCGCGTGGGAGCCTGCGGGCCACCGATTC
GCGCTCCTTCATGGGGAGGATGCGCACCCTTTCACGGTGTCATTTTATTC
CATGTTGCAACCAGTGACGGGACAGAAGGAGGTTACCCTCCTCCACCGCC
TGGAGAGCCCTAAGGCCCGCACGGTGAACAAGCTATTATGGTCTCCGAAT
GGCTCCATCATTGTGTTGGCGAACCTAACGGAGGGGAGTACGTTGGAATT
TTACGACGTGGACACCCAAAGCAGCCTTGCGAAGCGGGATGACTTGTCTC
GCATCGATTACTTGAAGTGGGATCCGTCAGGGCGATACCTCACTGATGCG
ATTCAACAGCCGATGGGTAACAGCTACTACAAATATAGCTACGACAACGG
GTTCCGGGTATGGACGTTTCAGGGAACGCTGATAGCGCATATTGAGAAGC
CGCAGTTTTATATGTTTCAATGGCGACCTCGCCCGCCTTCGCTGTTGACG
GCGGAACAGCAGAGAAAGGTGAAGAAAGACTTGAGGAAGTACGAGAGGAG
GTTTGACAAGGAGGACCGAGAGAAGGAAATGAATAAGAAGAGGGAGGAGT
GGAGGAGGAAGGGGGCCAGACGGGCGGAGTTCAGGTCGTTCTATGCGAGG
AGGAGGGAGGAGATGATGGCTAGGAAGGAGGAGCTGATTGCGTTGCAGAA
GGGGTATGATGACGAGGACCCGGATAATTATGAGGTGAGAGTGGTGACCA
GACGGATGGTGCCATTGGGGGAGCCGGAGATGGCGGGGCAGTGA
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protein sequence of NO12G03500.1

>NO12G03500.1-protein ID=NO12G03500.1-protein|Name=NO12G03500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=748bp
MPGEDYDNDYGEQLDSLATIDEELKGYLSEGPTDWVEPVYEPDYSTAIVV
DNLPKVPKDKYEKLLGYVRKIYQQIGPLAEDGLQMPVDDATGMTQGYAFI
NFFARDSAEKAIAATNNWNFDKAHALKVNSYVDLVRTMAHPETYTPQPAR
PLTTVPGLYAWLKDAQFRDQFVVRHGRDTEVFWAEAGGTPELVYGGEREK
AAGQGRFWCDQYVAWSKTGAYLLTYHRQGVALWGGPNFEKVARLAHHGVA
LAHFSNTDRYLVTYSYPQVPGDGPGHVVVWDVERSISVQQQVALRSWPVE
PYGKGNYFKWSHDDKYIAVGKSAYLRNPQAAQAAMDESGGGGGLPGHQKQ
VSMGGVGGDGVMDDVEGQISVFEVPSMELLDRKSIRAEGLRGWDWCPKSN
LLAYWAPEKQQQPARVVLVELPSKKEVRRKPLFHVEDCALTWQNEGEYLC
AKVTHKKRQSKKKVSLELFRIKEAGIALEMVELDPTPVQDFAWEPAGHRF
ALLHGEDAHPFTVSFYSMLQPVTGQKEVTLLHRLESPKARTVNKLLWSPN
GSIIVLANLTEGSTLEFYDVDTQSSLAKRDDLSRIDYLKWDPSGRYLTDA
IQQPMGNSYYKYSYDNGFRVWTFQGTLIAHIEKPQFYMFQWRPRPPSLLT
AEQQRKVKKDLRKYERRFDKEDREKEMNKKREEWRRKGARRAEFRSFYAR
RREEMMARKEELIALQKGYDDEDPDNYEVRVVTRRMVPLGEPEMAGQ*
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