NO12G03380, NO12G03380 (gene) Nannochloropsis oceanica

Overview
NameNO12G03380
Unique NameNO12G03380
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3609
Alignment locationchr12:928220..931828 -

Link to JBrowse

Properties
Property NameValue
DescriptionSignal peptidase complex subunit 2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:928220..931828 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008233peptidase activity
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005787signal peptidase complex
GO:0016021integral component of membrane
GO:0016020membrane
GO:0005783endoplasmic reticulum
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006465signal peptide processing
GO:0019538protein metabolic process
GO:0009987cellular process
Vocabulary: INTERPRO
TermDefinition
IPR009582SigPept_cplx_su2
Homology
BLAST of NO12G03380 vs. NCBI_GenBank
Match: XP_005853734.1 (signal peptidase complex subunit 2 [Nannochloropsis gaditana CCMP526] >EKU22624.1 signal peptidase complex subunit 2 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 214.2 bits (544), Expect = 2.700e-52
Identity = 105/136 (77.21%), Postives = 119/136 (87.50%), Query Frame = 0
Query:    1 MVVACAFAMVAQFYPMPFPESRPLLGVCCLAYFLASTVIQLIVSYAEQDAILTTQPL-EGMKEG-GLRVRTQFPRFQDVYTVILEEVGVKEPPTVSSKFSIGTVFDEEGNFYEEGLAQEVKALVDRYRKKRWDAPE 135
            MV+AC FA++AQFYPMPFPESRPLLGVCCLAYFLAST+IQLIVSY EQD ILTTQPL  G K G  L+VRTQFPRFQD YTV +EE G+++PPTVSSKFSIG VFDEEGNFYEEGLA+EV+ L+DRY+K+ WD  E
Sbjct:   60 MVIACVFALIAQFYPMPFPESRPLLGVCCLAYFLASTIIQLIVSYVEQDTILTTQPLRSGGKAGEALKVRTQFPRFQDEYTVFVEEAGMQDPPTVSSKFSIGKVFDEEGNFYEEGLAREVQRLLDRYKKQMWDVAE 195          
BLAST of NO12G03380 vs. NCBI_GenBank
Match: EWM25703.1 (Signal peptidase complex subunit 2 [Nannochloropsis gaditana])

HSP 1 Score: 153.3 bits (386), Expect = 5.700e-34
Identity = 76/98 (77.55%), Postives = 86/98 (87.76%), Query Frame = 0
Query:    1 MVVACAFAMVAQFYPMPFPESRPLLGVCCLAYFLASTVIQLIVSYAEQDAILTTQPL-EGMKEG-GLRVRTQFPRFQDVYTVILEEVGVKEPPTVSSK 97
            MV+AC FA++AQFYPMPFPESRPLLGVCCLAYFLAST+IQLIVSY EQD ILTTQPL  G K G  L+VRTQFPRFQD YTV +EE G+++PPTVSS+
Sbjct:   60 MVIACVFALIAQFYPMPFPESRPLLGVCCLAYFLASTIIQLIVSYVEQDTILTTQPLRSGGKAGEALKVRTQFPRFQDEYTVFVEEAGMQDPPTVSSE 157          
BLAST of NO12G03380 vs. NCBI_GenBank
Match: OEU17102.1 (microsomal signal peptidase 25 kDa subunit [Fragilariopsis cylindrus CCMP1102] >OEU17126.1 microsomal signal peptidase 25 kDa subunit [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 124.0 bits (310), Expect = 3.700e-25
Identity = 76/170 (44.71%), Postives = 97/170 (57.06%), Query Frame = 0
Query:    1 MVVACAFAMVAQFYPMPFPESRPLLGVCCLAYFLASTVIQLIVSYAEQDAILTTQPL--EGMKEG---------------------------GLRVRTQFPRFQDVYTVILEEVGVKEPPTVSSKFSIGTVFDEEGNFYEEGLAQEVKALVDRYRKKRWDAPEGKGEKKK 142
            M +ACAFAMVAQF P+PFPESR ++GVCC +YF+ STV+QLI +  +QD IL T+PL  +G K+                            G+RVR+QF RF + YTVILE    K+ P V  K+S+G  FD EG F E GL  EV+ L  R     +D  +   EKKK
Sbjct:   44 MAIACAFAMVAQFAPLPFPESRIVIGVCCASYFVLSTVLQLITTIIDQDCILLTRPLPKDGKKDDPNDIDIIGRTIFRKSPKDIKNKDLFGYGVRVRSQFERFSEWYTVILEFEQKKDTPCVEQKWSVGQFFDTEGMFDEIGLQMEVEKLYRRLEDADYDI-KSAAEKKK 212          
BLAST of NO12G03380 vs. NCBI_GenBank
Match: GAX26444.1 (signal peptidase complex subunit 2 [Fistulifera solaris])

HSP 1 Score: 123.6 bits (309), Expect = 4.900e-25
Identity = 67/146 (45.89%), Postives = 93/146 (63.70%), Query Frame = 0
Query:    1 MVVACAFAMVAQFYPMPFPESRPLLGVCCLAYFLASTVIQLIVSYAEQDAILTTQPLEG-------MKEGGLRVRTQFPRFQDVYTVILE---EVGVKEPPTVSSKFSIGTVFDEEGNFYEEGLAQEVKALVDRYRKKRWDAPEGK 137
            M  AC  A VAQF P+PFPESRP+LGVC   YFL S ++Q I ++ ++DAIL T+PLE        M + G+R+R+Q PRF + YTVI++   E      P V   +S+G  FD+EG F E GLAQ V  L++R++  ++D P+ K
Sbjct:   77 MFAACVSACVAQFVPIPFPESRPILGVCGALYFLLSGILQFITTFIDKDAILLTKPLENAPKTNADMAKYGMRIRSQLPRFSEWYTVIVQFQLEDKNAVSPYVEQTWSVGQFFDKEGYFDEVGLAQRVDQLLERFKAGKFDEPKSK 222          
BLAST of NO12G03380 vs. NCBI_GenBank
Match: GAX19742.1 (hypothetical protein FisN_37Lh006 [Fistulifera solaris])

HSP 1 Score: 122.1 bits (305), Expect = 1.400e-24
Identity = 65/146 (44.52%), Postives = 95/146 (65.07%), Query Frame = 0
Query:    1 MVVACAFAMVAQFYPMPFPESRPLLGVCCLAYFLASTVIQLIVSYAEQDAILTTQPLEG-------MKEGGLRVRTQFPRFQDVYTVILE-EVGVKE--PPTVSSKFSIGTVFDEEGNFYEEGLAQEVKALVDRYRKKRWDAPEGK 137
            M  AC  A VAQF P+PFPESRP+LG+C   YF+ S ++Q I ++ ++DAIL T+PLE        M + G+R+R+Q PRF + YTVI++ ++  K    P V   +S+G  FD+EG F E GLAQ V  L++R++  ++D P+ K
Sbjct:   79 MFAACVAACVAQFVPIPFPESRPILGICGALYFILSGILQFITTFIDKDAILLTKPLENAPKTNADMAKYGMRIRSQLPRFSEWYTVIVQFQLDDKNAVSPYVEQTWSVGQFFDKEGYFDEVGLAQRVDQLLERFKAGKFDEPKSK 224          
BLAST of NO12G03380 vs. NCBI_GenBank
Match: XP_002183401.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC45101.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 115.2 bits (287), Expect = 1.700e-22
Identity = 66/152 (43.42%), Postives = 92/152 (60.53%), Query Frame = 0
Query:    1 MVVACAFAMVAQFYPMPFPESRPLLGVCCLAYFLASTVIQLIVSYAEQDAILTTQPLE--------GMKEGGLRVRTQFPRFQDVYTVILEEVGVKE---PPTVSSKFSIGTVFDEEGNFYEEGLAQEVKALVDRYRKKRWDAPEGKGEKKK 142
            M ++C FAM+AQF P+PFPESRP+LGVC   YF  S ++Q + ++ ++D IL T+P +         M   GLR+R+  PRF + Y VILE    K+    P V   +SIG  FD+EG F E GL+QE+  L  R+  K +D+  G  EKK+
Sbjct:   40 MALSCVFAMIAQFAPIPFPESRPVLGVCGALYFALSGILQFVTTFIDKDCILWTKPADISASTKNKDMHLYGLRIRSNLPRFSEWYEVILEFQKPKQASASPMVKHTWSIGQFFDKEGYFDEIGLSQEIDKLFKRFEAKDYDS-AGSDEKKR 190          
BLAST of NO12G03380 vs. NCBI_GenBank
Match: CBN75563.1 (Probable Spc2 homolog, Subunit of Signal Peptidase Complex [Ectocarpus siliculosus])

HSP 1 Score: 114.0 bits (284), Expect = 3.900e-22
Identity = 61/129 (47.29%), Postives = 80/129 (62.02%), Query Frame = 0
Query:    1 MVVACAFAMVAQFYPMPFPESRPLLGVCCLAYFLASTVIQLIVSYAEQDAILTTQPLEGMKEG-GLRVRTQFPRFQDVYTVILEEVGVKEPPTVSSKFSIGTVFDEEGNFYEEGLAQEVKALVDRYRKK 129
            M +AC FA+ AQF+P PFPESR LL VCC++YF  S  + LIV+Y E+D IL T        G G+ VRT FPRF +++TV  EE      P +  ++++G  FD EGNF E G+   VK LV R  K+
Sbjct:   51 MALACVFAVTAQFWPQPFPESRALLAVCCVSYFACSFCLHLIVTYWEKDLILATARSSSRSMGKGIFVRTDFPRFDEMFTVSAEERKPGSKP-IEEQWNVGKYFDYEGNFDEWGMGDAVKKLVTRLEKR 178          
BLAST of NO12G03380 vs. NCBI_GenBank
Match: XP_002295756.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >ACI64473.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 111.7 bits (278), Expect = 1.900e-21
Identity = 61/149 (40.94%), Postives = 90/149 (60.40%), Query Frame = 0
Query:    1 MVVACAFAMVAQF-YPMPFPESRPLLGVCCLAYFLASTVIQLIVSYAEQDAILTTQP------LEGMKEG--------GLRVRTQFPRFQDVYTVILEEVGVKEPPTVSSKFSIGTVFDEEGNFYEEGLAQEVKALVDRYRKKRWDAPE 135
            M +AC FA +AQF     FP +R  LGVCC +YF  S ++QL++++ ++D I+TT+P      ++ +K G        G+RVRTQFPRF + YTVILE  G +    V   +S+G  FD +G F EEG+  E++ L  R+   ++D PE
Sbjct:   79 MALACVFASIAQFGLNTDFPNNRLWLGVCCASYFCLSGILQLMMTFIDKDCIMTTRPVTDPEAIKAIKNGGNKEMDKYGIRVRTQFPRFSEFYTVILEFQGKENSEFVKGTWSVGHFFDVDGFFDEEGMQIEIEELYQRFEAGKFDKPE 227          
BLAST of NO12G03380 vs. NCBI_GenBank
Match: EJK77865.1 (hypothetical protein THAOC_00270 [Thalassiosira oceanica])

HSP 1 Score: 110.2 bits (274), Expect = 5.600e-21
Identity = 65/153 (42.48%), Postives = 87/153 (56.86%), Query Frame = 0
Query:    1 MVVACAFAMVAQF-YPMPFPESRPLLGVCCLAYFLASTVIQLIVSYAEQDAILTTQPLE-----------GMKEGGLRVRTQFPRFQDVYTVILEEVGVKEPP-TVSSKFSIGTVFDEEGNFYEEGLAQEVKALVDRYRKKRWDAPEGKGEKK 141
            M  AC FA  AQF     FPE+R LLG C   YF  S V+QLI+++ ++D I+ T+PLE            MK  G+RVR+ FPRF + YTV LE  G + PP  V   +S+G  FD EG F E G+  E++ L  R+   ++D PE  G+ K
Sbjct:   79 MFTACCFAAFAQFALAKDFPENRILLGFCVAVYFALSGVLQLIITFVDKDCIMITRPLEDETAIKLVKNKDMKNFGIRVRSDFPRFSEFYTVKLEFQGKEAPPGYVEQTWSVGKFFDVEGYFDEVGMMNEIEKLYQRFEAGKFDKPEKDGKVK 231          
BLAST of NO12G03380 vs. NCBI_GenBank
Match: XP_005823567.1 (hypothetical protein GUITHDRAFT_89949 [Guillardia theta CCMP2712] >EKX36587.1 hypothetical protein GUITHDRAFT_89949 [Guillardia theta CCMP2712])

HSP 1 Score: 86.7 bits (213), Expect = 6.600e-14
Identity = 52/141 (36.88%), Postives = 81/141 (57.45%), Query Frame = 0
Query:    3 VACAFAMVAQFY-----PMPFPESRPLLGVCCLAYFLASTVIQLIVSYAEQDAILTTQP-------LEGMKEGGLRVRTQFPRFQDVYTVILE--EVGVKEPPTVSSKFSIGTVFDEEGNFYEEGLAQEVKALVDRYRKKR 130
            +AC FA++AQF+     PMPFPESRPLL VC + Y L S  +Q+I+++ EQDAIL T P          +++  ++V T+ PRF   YTV LE  +   +   T  +   +   F+E G F+E+   ++++AL+     K+
Sbjct:   70 LACIFALIAQFWPNPFKPMPFPESRPLLLVCTVLYALLSFALQMIMTFYEQDAILYTLPPNETSPFWNSLQKKRVKVSTRLPRFSINYTVTLEVKDGSGQVVDTHKAVLKLTDYFEENGTFHEDFFMEDIEALISALAAKK 210          
The following BLAST results are available for this feature:
BLAST of NO12G03380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005853734.12.700e-5277.21signal peptidase complex subunit 2 [Nannochloropsi... [more]
EWM25703.15.700e-3477.55Signal peptidase complex subunit 2 [Nannochloropsi... [more]
OEU17102.13.700e-2544.71microsomal signal peptidase 25 kDa subunit [Fragil... [more]
GAX26444.14.900e-2545.89signal peptidase complex subunit 2 [Fistulifera so... [more]
GAX19742.11.400e-2444.52hypothetical protein FisN_37Lh006 [Fistulifera sol... [more]
XP_002183401.11.700e-2243.42predicted protein, partial [Phaeodactylum tricornu... [more]
CBN75563.13.900e-2247.29Probable Spc2 homolog, Subunit of Signal Peptidase... [more]
XP_002295756.11.900e-2140.94predicted protein [Thalassiosira pseudonana CCMP13... [more]
EJK77865.15.600e-2142.48hypothetical protein THAOC_00270 [Thalassiosira oc... [more]
XP_005823567.16.600e-1436.88hypothetical protein GUITHDRAFT_89949 [Guillardia ... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010297NSK010297Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G03380.2NO12G03380.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO12G03380.1NO12G03380.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592791gene_5512Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Spc2gene4810Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G03380.2NO12G03380.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO12G03380.1NO12G03380.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G03380 ID=NO12G03380|Name=NO12G03380|organism=Nannochloropsis oceanica|type=gene|length=3609bp
TAGGGGTTCAAGGACGAATATGTTCTTGTCGCTTGTTTGCTTGCCCTGTT
TGGCCCGTTGCTTAGTGGCTACATGTAAAATATATCAATACACTCGCTGC
CTGCTCACACACACTCACATGCCCTTCATCCCTCCTTCACCTTCCACTCC
TTCATCTCGGCATTGGCAATCTCTCTCTCCCGCATCGACAGGCTTCGGTA
AACTTTCCCCGTAACTGCCTCCCACTTCTTCGTCTCTTTGACGCTCAATG
CAGGCACATAAGCTGGGTTTGCCTGGGCTGCACGGAACTTCTTGTTGTGC
AGGGCAACCAATGCTTTCATCTCCTCATCCTCCGCTGCTGCTGCTGCTGC
TGCTGCTGCTGCTATGCTTTCGCTGCGTTTGACACCCCCGGCGGCTGCTT
TCCGTTTTCCTCCTGCTCCTCCCCTGCCTGCTGCGGCTTCCCTTGGTCTG
CCATTCACCACCTTCACATAAGCACGGCCGCTGCTACAAGTGCTGCTGTT
GCTACTGCTGGCTGTTCCTGTCGTCATCCGATGTGCCTGCTGTGGGACCG
CTGGCTTTCGCGCCGGAGGACCGACTGGACCAGCACCATCACTCCTTCCT
CCATCCATCCCTCCTCCTCTCCTCCCCCCTTCTCCCTTTCCCATTTTGGC
CATCTTAAACTCTTCCAACTTCTGTCGCATCAACTGGCCTGCCGATGCTT
GTCCTTGCAACCCTCTTTCTGCTCCTCCTCCTCTACCTCTCACGCCACCG
ATCCCCTGCCTCTGCTGCTGCTGCTGCTGCTGCTGCTCCTCCTCTCCGTC
ACAATACTCCTCCATCAACCCTTCTTCTCCCTCCTCTTCTTCCTCCTCAT
CCACCTCCATCCTCACCTCCCTTCGCCTTACAAATGACGACATGTGTGCC
CTCGGCCGCTTCTGCCCCCCCCCTCCTGCTGCTGCTGCTGCTGCTGCTTT
TGCCGCCCCTCCACCATTTCCTCCTGCAGCCGGCTTGAGTAATCTGGGTG
GGGGAGGACCCATGACCACTTGCTGCTGTGACCCTTCTCCATTTTCTTTG
TTCGCTCCTCCTCCTCTTTCTGCTCCGCTATTGCTGGTCGTGCTGGTATT
GCTGCCTCGAATGCTGCTCCCCCGCCGGACCGCCAAAGCTGCTGCTGCTG
CTGCGTTGGCTGCTGCGACCGCCGCCCCCACCCCTACCAATAAGCCTTGA
TTTGAATAGCGACGGGCTGTGCCGCTCATGCGCCGGTTCAATGATGAAAA
AGAGGAGGAGGTGGAGGAGGCGGAGGAGGCGGCGGCGGCGGCGGCGGCGG
CGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAA
CGGCCAGACTGCAGGCGCCAATCTCGATAGAGCTCTGGGTGGGCCGTCTG
AAACCAGGGGTCCAGTTTAACCTGTTTGATTGCGGAGGGGAGGGAGGTAT
GAGTAGCGGATGGAGCTAATTATGATGGGGGCGTCCTTCCAGGTGTGGAG
TGGGTGCGGCATGGCAGGCTGAATCACGGGGAAGCATCTCACTGACCTGT
TGGTACTCCTCTAGCTTTTGGCGGACATCGGCAAGATCCGTCCATCCCAA
GCCTGGGGGCAGAAAGTCAAAGTCCCAGACGTCCTCCATCTGCTGTATTG
GCGCTTGTGTTGCTTGTGGACGTCGGTAAGGCTGTCTATGCATTCGAATA
AGGGGGATCAGAGTTAACGAAGGAGGGCGTGGGGAAGTGCTTATTGCTTC
GCAAAACCAGGCCCAGGAAGCCTAAATGGTGCACGGTGCGGAAAAGGAAA
GTAGGGGATTATTGTGTATTATTACGGAGAGTGGGCGTTGCCCAGAGATC
TGCTGGTCACTGGTTTTGTATGGAGCACGCAGACACATGCACCCACGGCT
CGACGTCACGGCGGTCGGCGATGAGAGCCTCATTTGAAGCCTTCCCTTCC
CGCCTTAGCTGTCCACGACCAGCAGCGTGTGCAACTCGCCCATCAGTAGC
CCACGCATCCACCCAAACACATAGATAGGAGACAGGACTACAAGAAGATC
CACGTCCATGCCGATGGTTGTGGCATGAGCATCATGCTGATCATCACCAT
AATCATCATCATCATCATCACCACCCTTACCACGCCGTTGCCCCTCTTCC
TTTACTCCCCTCCGTACACACCCCACAGTCAATCTGGTCGCACGAATCAA
GCCTTTTACCACTCCCATCACCATCAGTATCCCCAGTACCAACACCATGG
CCGCTCCACCAACCGCAAATCTAGGGGGTGCCGACGgtaagcgcctgcac
ccaaataccagcctccccactatcccccctgtcccctgcccatcacttgc
cccatcctgacttgcaacgcgatacagcatcgattttcagcttcttagtt
gtgcgtttattccttttttttcgctactctccctgctgacctccctcgca
cacaacagAAGAGGAGGAGCCCCTTCATATCGACACGGGCGACCAAATGA
AAGTGAAGCAAGTGATGGATGAAGCAGTCGTCAAAGCCATTGTAGACGCG
GGATACGAAGgtattgttgagtgtgataagttggactgatagcgagcttt
atcatccttgcaccgtctcttgtatcatcctcctctctttgtgcgcccct
ctccttcagtgtctcgatcttgcatttggttgcgcggcgatcagcgctat
ctacctacgttgaattctggctttccatgccatattaaggttgcacacca
tctgtcctttcacccatcatcctcccccttcccccagAAAACTATTTCTA
CGACAATATCAAGCTCACCCTTATGGTCGTCGCCTGTGCCTTCGCCATGG
TCGCGCAATTCTACCCTATGCCCTTCCCTGAATCACGCCCTTTGTTGGGA
GTGTGCTGCTTGGCCTACTTCCTAGCTAGCACCGTCATCCAGCTCATTGT
TTCTTACGCCGAGCAAGACGCGATCCTGACCACTCAGCCCTTGGAGGGAA
TGAAGGAGGGGGGGTTGAGGGTGCGGACTCAATTTCCCCGGTTTCAAGAT
GTGTATACGGTGATTTTGGAAGAAGTAGGAGTCAAGGAACCGCCTACGGT
GTCGAgtaagtgttggagagcgagggaagggagggaaggagggagggagg
gaagtagggagggaaggagggaggggggagaagggatggagtgggcgtta
caatacaacatcactctttccctctaggatttctctatggtgcgttattt
gtcactttctcattatttatttcttatgctgtacgtcttttccaccctac
agGCAAATTTTCCATCGGCACGGTTTTTGACGAAGAAGGGAATTTTTACG
AGGAGGGATTGGCACAGGAAGTCAAGGCGTTGGTCGACCGTTACCGGAAA
AAACGTTGGGATGCCCCGGAGGGGAAGGGGGAGAAGAAGAAGACAAAGTA
AGAGGGGAGGGAGGTTTGAGAGAGGGGTTGAGGAGGGGGGAGATGTATGT
AGATGGGGCACATGCAGAAGCAGTAATGGACTTGTCGTAAGCCGCTTTGA
CAGGGTAGGGTTACCAATAGAAGAAGGAAAGAAAGAGGACAACAGAAAGC
AGGCAGGCA
back to top

protein sequence of NO12G03380.2

>NO12G03380.2-protein ID=NO12G03380.2-protein|Name=NO12G03380.2|organism=Nannochloropsis oceanica|type=polypeptide|length=144bp
MVVACAFAMVAQFYPMPFPESRPLLGVCCLAYFLASTVIQLIVSYAEQDA
ILTTQPLEGMKEGGLRVRTQFPRFQDVYTVILEEVGVKEPPTVSSKFSIG
TVFDEEGNFYEEGLAQEVKALVDRYRKKRWDAPEGKGEKKKTK*
back to top

protein sequence of NO12G03380.1

>NO12G03380.1-protein ID=NO12G03380.1-protein|Name=NO12G03380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=203bp
MAAPPTANLGGADEEEEPLHIDTGDQMKVKQVMDEAVVKAIVDAGYEENY
FYDNIKLTLMVVACAFAMVAQFYPMPFPESRPLLGVCCLAYFLASTVIQL
IVSYAEQDAILTTQPLEGMKEGGLRVRTQFPRFQDVYTVILEEVGVKEPP
TVSSKFSIGTVFDEEGNFYEEGLAQEVKALVDRYRKKRWDAPEGKGEKKK
TK*
back to top
Synonyms
Publications