NO12G03330, NO12G03330 (gene) Nannochloropsis oceanica

Overview
NameNO12G03330
Unique NameNO12G03330
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2575
Alignment locationchr12:914309..916883 -

Link to JBrowse

Properties
Property NameValue
DescriptionNucleosome assembly protein 1;1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:914309..916883 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006334nucleosome assembly
GO:0006334nucleosome assembly
Vocabulary: INTERPRO
TermDefinition
IPR037231NAP-like_sf
IPR002164NAP_family
Homology
BLAST of NO12G03330 vs. NCBI_GenBank
Match: EWM25708.1 (nucleosome chromatin assembly complex protein [Nannochloropsis gaditana])

HSP 1 Score: 336.3 bits (861), Expect = 1.500e-88
Identity = 210/370 (56.76%), Postives = 257/370 (69.46%), Query Frame = 0
Query:   84 DKNNTEAKEASPFANTTFSFTAPQGGASAPFPNLAGFSQALASAAEG-AREEDDEPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKK-----EEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFA-PNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMKPKGKSRGGVVLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRYPRQAGRPRRGGR 447
            D+ + + + ASPFANTTFSFTAPQGG + PFP+L+GF QALA AA+G A       +APEVQVRI+YLK LQ++R+                          KR A+L G +DV+++     E+  E  A EG EG      G+P+FWL+ +++ RL+ GM++E+DV ALK+L D++C DKEDG GF L FHFA PNPYFTN VLSK+Y VPNLM+D +A+L++  GT I+W S K+NLC+EEKRMKPKGKSRGGVV+KQ+KK+SFF+WF AV                LM +LD DYAVAS LREEIVPEAIKWYLGEG+         XXXXXXXXXXXXXXXXXXXXXXXXX R PRQ GRPRRGGR
Sbjct:    3 DEASKKPEGASPFANTTFSFTAPQGGVTGPFPSLSGFQQALADAAQGAAXXXXXXXVAPEVQVRIEYLKKLQQEREEFMDAFHEERKALVKKYALLTAPLLSKREALLKGAIDVKEEDGQVVEKPVEAAAGEGEEGETSLPKGIPNFWLRTLMSHRLIAGMVQEEDVGALKYLRDVECVDKEDGAGFSLHFHFAQPNPYFTNPVLSKAYEVPNLMDDGEAILQACAGTAIHWVSPKQNLCMEEKRMKPKGKSRGGVVVKQIKKESFFNWFEAVXXXXXXXXXXXXXXXXLMGKLDYDYAVASILREEIVPEAIKWYLGEGEEDESEYADSXXXXXXXXXXXXXXXXXXXXXXXXXQRRPRQPGRPRRGGR 372          
BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_002295466.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >ACI64183.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 166.4 bits (420), Expect = 2.000e-37
Identity = 97/263 (36.88%), Postives = 136/263 (51.71%), Query Frame = 0
Query:  139 LAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINW----TSTKKNLCVEEKRMKPKGKSRGGV--VLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396
            L P +  RI  LK+L E RD                          +RR ++  + +VE           EG E GD    G+P FW  AM +  ++  +I E+DV  L FLTDI   D  DG GF L FHF+PNPYFTN  L+K+Y VPNL+ +++ +L++  GTTINW    + T K     +K+ K  G   G +  V K  + DSFFH+FT   +P   + +DEEE + + E  D DY +A   R  I+P+A+ W+ GE
Sbjct:   21 LPPCILPRISKLKSLNEARDAILEEYKVERAALERRYKEKMEPLFVERRGVVFAEGEVED-----VVSDNEGDEVGDEVVKGIPQFWACAMGHVDVIGELITEEDVDCLDFLTDITSTDSTDGQGFSLTFHFSPNPYFTNTTLTKTYEVPNLLTEDEPILQNVTGTTINWKPGQSLTHKE--TSKKQRKKSGPQAGQIRTVKKLERTDSFFHFFTPPKMPSLGDIIDEEEADAMEEMFDHDYDIAQAFRGSIIPKAVLWFTGE 276          
BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_003058442.1 (Nucleosome/chromatin assembly complex protein [Micromonas pusilla CCMP1545] >EEH56897.1 Nucleosome/chromatin assembly complex protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 163.7 bits (413), Expect = 1.300e-36
Identity = 101/286 (35.31%), Postives = 146/286 (51.05%), Query Frame = 0
Query:  137 EPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEA--GVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKED------------------------GTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMKP-KGKSRGGVVLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396
            E L  +V+ R++ L  LQE  D                          KR  I+ G  DV+         A  G +  + +EA  G+P FWL A+ N  +    I E D PALKFL DI C   +D                          GF+LDFHF  NPYF+N VLSKSY   +++++ED +LES EGT I W +  KNLCV+  R KP KG  +G  + K  K DSFF++F+  ++P   + + EEE E+L + +++DY + + ++E+I+P+AI W+ GE
Sbjct:   61 ESLHYKVRARVNALTTLQESHDELYEKYLDEKRALEAKYRDLYAPLYVKRAGIVKGAEDVD---------ATPGEDDDETEEAPVGIPDFWLCALRNHEIFEQQITEKDEPALKFLNDITCTPLQDLPVDXXXXXXXXXXXXXXXXXXXXQRGFRLDFHFDENPYFSNEVLSKSY---HMVDEEDPILESAEGTDIEW-AQGKNLCVKVLRKKPKKGDKKGKPITKTEKADSFFNFFSPPDVPGEGDDLTEEEAEQLQDFMEMDYEMGAIIKEKIIPDAISWFTGE 333          
BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_003597592.1 (nucleosome assembly protein 1;4 [Medicago truncatula] >ABD28504.1 Nucleosome assembly protein (NAP) [Medicago truncatula] >AES67843.1 nucleosome assembly protein [Medicago truncatula])

HSP 1 Score: 162.2 bits (409), Expect = 3.800e-36
Identity = 104/299 (34.78%), Postives = 156/299 (52.17%), Query Frame = 0
Query:  106 PQGGASAPFPNLAGFSQALASAAE---GAREEDDEPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVK---EAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMK---PKGKSRGGVVLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396
            P   A+    + AG   AL    +   G R +  E L+P V+ R++ LK LQ + D                          KR  I++G +DV       E I  E G+G + K   E GVP FWL AM  + +L   I E D  ALK+L DI+ +  ++  GF+L+F+F  NPYF N+VL+K+Y   +++ED+D +LE + GT I W   K   C+ +K MK    KG      ++K  K DSFF+ F   +IPE  + +D++  EEL   ++ DY + ST+R++I+P A+ W+ GE
Sbjct:    9 PAAAAALSAEDRAGLVNALKDKLQLLAGDRVDVMETLSPNVKQRVEVLKVLQSEHDELESKYLEERAQLEAKYQKLYEPLYTKRYEIVNGVIDV-------EGITNEAGQGEESKAAEEKGVPSFWLTAMKTNEILGEEITERDEEALKYLKDIKWSKLDNPKGFKLEFYFDSNPYFQNSVLTKTY---HMIEDDDPILEKSIGTEIEWHPGK---CLTQKVMKKKPKKGSKNAKPIIKTEKCDSFFNIFNPPHIPEDDDEIDDDVVEELQNLMEHDYDIGSTIRDKIIPHAVSWFTGE 294          
BLAST of NO12G03330 vs. NCBI_GenBank
Match: EMS55560.1 (Nucleosome assembly protein 1-like 1-A [Triticum urartu])

HSP 1 Score: 160.2 bits (404), Expect = 1.500e-35
Identity = 89/259 (34.36%), Postives = 140/259 (54.05%), Query Frame = 0
Query:  137 EPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMKPKGKSRGGVVLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396
            E L+P V+ R+++L+ +Q Q D                          KR  I++G V+V+    A E   +   EGGD    GVP FWL A+  + +L   I+E D P LK+L DI+ +  +D  GF+L+F F  NP+F N+VL+KSY   ++++++D +LE   GT I W   K       K+   KG      + K  + +SFF++F+   +PE  E +DEE  +EL  Q++ DY + ST+R++I+P A+ W+ GE
Sbjct:  146 ESLSPNVRRRVEFLRGIQSQHDEIETKFFEERAALEAKYQKLYEPLYAKRYDIVNGVVEVD--GVAKEPTTENAAEGGDSDAKGVPDFWLTALKTNDVLTEEIQERDEPVLKYLKDIKWSRIDDPKGFKLEFFFDTNPFFKNSVLTKSY---HMVDEDDPILEKAIGTEIEWYPGKNVTQKILKKKPKKGSKNTKPITKTEECESFFNFFSPPQVPEDDEDIDEEAADELQGQMEHDYDIGSTIRDKIIPHAVSWFTGE 399          
BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_009606365.1 (PREDICTED: nucleosome assembly protein 1;3 [Nicotiana tomentosiformis])

HSP 1 Score: 159.1 bits (401), Expect = 3.200e-35
Identity = 93/263 (35.36%), Postives = 145/263 (55.13%), Query Frame = 0
Query:  137 EPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMKPKGKSRGGVVLKQVKK----DSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396
            E L+P V+ R++ L+ +Q Q D                          KR  I++G V+V+   EA +T   +  E  D  E GVP FW+ AM N+ +L   I E D  ALKFL DI+ +  E+  GF+L+F F  NPYFTN VL+K+Y   +++++++ +LE   GT I W   K   C+ +K +K K K +G    K + K    +SFF++F+   +P+  E +DE+  EEL   ++ DY + ST+R++I+P A+ W+ GE
Sbjct:   45 ENLSPNVRKRVEVLREIQTQHDELEAKFFEERAALEAKYQKQYQPLYTKRSEIVNGVVEVD--GEATQTAVADEEEDKDAVEKGVPDFWITAMKNNEVLAEEITERDEGALKFLKDIKWSRIENPKGFKLEFFFETNPYFTNTVLTKTY---HMIDEDEPILEKAIGTEIEWYPGK---CLTQKILKKKPK-KGSKNTKPITKTEQCESFFNFFSPPQVPDDEEDIDEDAAEELQNLMEQDYDIGSTIRDKIIPHAVSWFTGE 298          
BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_016503801.1 (PREDICTED: nucleosome assembly protein 1;3-like [Nicotiana tabacum])

HSP 1 Score: 159.1 bits (401), Expect = 3.200e-35
Identity = 93/263 (35.36%), Postives = 145/263 (55.13%), Query Frame = 0
Query:  137 EPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMKPKGKSRGGVVLKQVKK----DSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396
            E L+P V+ R++ L+ +Q Q D                          KR  I++G V+V+   EA +T   +  E  D  E GVP FW+ AM N+ +L   I E D  ALKFL DI+ +  E+  GF+L+F F  NPYFTN VL+K+Y   +++++++ +LE   GT I W   K   C+ +K +K K K +G    K + K    +SFF++F+   +P+  E +DE+  EEL   ++ DY + ST+R++I+P A+ W+ GE
Sbjct:   45 ENLSPNVRKRVEVLREIQTQHDELEAKFFEERAALEAKYQKQYQPLYTKRSEIVNGVVEVD--GEATQTAVADEEEDKDAVEKGVPDFWITAMKNNEVLAEEITERDEGALKFLKDIKWSRIENPKGFKLEFFFETNPYFTNTVLTKTY---HMIDEDEPILEKAIGTEIEWYPGK---CLTQKILKKKPK-KGSKNTKPITKTEQCESFFNFFSPPQVPDDEEDIDEDAAEELQNLMEQDYDIGSTIRDKIIPHAVSWFTGE 298          
BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_019240635.1 (PREDICTED: nucleosome assembly protein 1;3 isoform X1 [Nicotiana attenuata] >OIT20097.1 nucleosome assembly protein 13 [Nicotiana attenuata])

HSP 1 Score: 159.1 bits (401), Expect = 3.200e-35
Identity = 92/262 (35.11%), Postives = 143/262 (54.58%), Query Frame = 0
Query:  137 EPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMK---PKGKSRGGVVLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396
            E L+P V+ R++ L+ +Q Q D                          KR  I++G V+V    EA +T A +  E  D  E GVP FW+ AM N+ +L   I E D  ALKFL DI+ +  E+  GF+L+F F  NPYFTN VL+K+Y   +++++++ +LE   GT I W   K   C+ +K +K    KG      + K  + +SFF++F+   +P+  E +DE+  EEL   ++ DY + ST+R++I+P A+ W+ GE
Sbjct:   45 ENLSPNVRKRVEVLREIQTQHDELEAKFFEERAALEAKYQKQYQPLYTKRSEIVNGVVEV--VGEATQTAAADKEEDKDAVEKGVPDFWVTAMKNNEVLAEEITERDEGALKFLKDIKWSRIENPKGFKLEFFFETNPYFTNTVLTKTY---HMIDEDEPILEKAIGTEIEWYPGK---CLTQKILKKKPKKGSKNSKPITKTEQCESFFNFFSPPQVPDDEEDIDEDAAEELQNLMEQDYDIGSTIRDKIIPHAVSWFTGE 298          
BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_019240636.1 (PREDICTED: nucleosome assembly protein 1;3 isoform X2 [Nicotiana attenuata])

HSP 1 Score: 159.1 bits (401), Expect = 3.200e-35
Identity = 92/262 (35.11%), Postives = 143/262 (54.58%), Query Frame = 0
Query:  137 EPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMK---PKGKSRGGVVLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396
            E L+P V+ R++ L+ +Q Q D                          KR  I++G V+V    EA +T A +  E  D  E GVP FW+ AM N+ +L   I E D  ALKFL DI+ +  E+  GF+L+F F  NPYFTN VL+K+Y   +++++++ +LE   GT I W   K   C+ +K +K    KG      + K  + +SFF++F+   +P+  E +DE+  EEL   ++ DY + ST+R++I+P A+ W+ GE
Sbjct:   45 ENLSPNVRKRVEVLREIQTQHDELEAKFFEERAALEAKYQKQYQPLYTKRSEIVNGVVEV--VGEATQTAAADKEEDKDAVEKGVPDFWVTAMKNNEVLAEEITERDEGALKFLKDIKWSRIENPKGFKLEFFFETNPYFTNTVLTKTY---HMIDEDEPILEKAIGTEIEWYPGK---CLTQKILKKKPKKGSKNSKPITKTEQCESFFNFFSPPQVPDDEEDIDEDAAEELQNLMEQDYDIGSTIRDKIIPHAVSWFTGE 298          
BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_008609365.1 (hypothetical protein SDRG_05429 [Saprolegnia diclina VS20] >EQC37203.1 hypothetical protein SDRG_05429 [Saprolegnia diclina VS20])

HSP 1 Score: 158.7 bits (400), Expect = 4.200e-35
Identity = 96/270 (35.56%), Postives = 147/270 (54.44%), Query Frame = 0
Query:  134 EDDEPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDV----EKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMKPKGKSRGG--VVLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGEGD 398
            E +  L P V  R+ +LK LQEQ+                           +R  +++G+ +V    EK EEA  ++             G+P FW++A++N  ++  MI + D+PAL+FL +++     +  GF+L+FHFAPN +FTN VL+K Y V       DAML++  GT INW +  KNLC ++K++K K K+ G   +V K    DSFF +F+ V +P   E   EEE +E+M QLD D+ +  T+ E IVP+A+ W+ GE +
Sbjct:   20 EAEVVLPPAVAARVAHLKTLQEQQAVIEAQFEEERRQLELKYEKLYQPLYDERALVVTGEKEVASADEKAEEAEPSV-------------GIPKFWVKALMNHPMIEQMITDRDIPALEFLKNVKSESLTETNGFRLEFHFAPNEFFTNDVLTKVYDVAE-GPSGDAMLKNIVGTPINW-NEGKNLCEKKKKIKQKAKNGGATRLVTKIEPCDSFFQFFSPVEMPTEDE---EEESDEIMHQLDTDFQIGFTIHETIVPQAVLWFTGEAE 271          
The following BLAST results are available for this feature:
BLAST of NO12G03330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25708.11.500e-8856.76nucleosome chromatin assembly complex protein [Nan... [more]
XP_002295466.12.000e-3736.88predicted protein, partial [Thalassiosira pseudona... [more]
XP_003058442.11.300e-3635.31Nucleosome/chromatin assembly complex protein [Mic... [more]
XP_003597592.13.800e-3634.78nucleosome assembly protein 1;4 [Medicago truncatu... [more]
EMS55560.11.500e-3534.36Nucleosome assembly protein 1-like 1-A [Triticum u... [more]
XP_009606365.13.200e-3535.36PREDICTED: nucleosome assembly protein 1;3 [Nicoti... [more]
XP_016503801.13.200e-3535.36PREDICTED: nucleosome assembly protein 1;3-like [N... [more]
XP_019240635.13.200e-3535.11PREDICTED: nucleosome assembly protein 1;3 isoform... [more]
XP_019240636.13.200e-3535.11PREDICTED: nucleosome assembly protein 1;3 isoform... [more]
XP_008609365.14.200e-3535.56hypothetical protein SDRG_05429 [Saprolegnia dicli... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010291NSK010291Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G03330.1NO12G03330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592773gene_5508Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100333g2gene4806Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G03330.1NO12G03330.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G03330 ID=NO12G03330|Name=NO12G03330|organism=Nannochloropsis oceanica|type=gene|length=2575bp
ATAATTTATCGCATCTCTAAATTATGCTTTTTGGCTGTGTTGGTCATTTT
CCTTCTCCAGTGCTTATCAAATGCGAGGACACTAATTCGACTCCATGGAA
GGGGTTCTGGTGGGGAGGTTGGTCGTGGAAACCAAGAAAAGACCATACAA
CACACGATAACGAAGCAACAGGCAGAGGCCTTGAACATTTATCAAGCTTA
AAAGGTCATGCACATTGTCCATACGACTTGAAAGGGATAAAATTTTGGGC
ATGAATTTAGAGTACAAGTATGAGCTGTGGCTCAACGGGTGGTGGCCACA
CCCTTTCCACGGAATCAGAACATACAACCCCAGCATCACCACGAGCATTG
GAAGCAGCACGATTGTCGGAAGGCTCGCGAAAATTGGCAATGCGGACCAA
GCAAGTTTCTTGGCTTCCCACTCTCCAACGCTCTCTTATCGAACAACATT
TAAGCTACACCATACACCCCACAACGCGCGCGACACAGGCAGCCACTCAA
AAAATAACCATGGCTGACGACAAGAATAACACGGAGGCGAAAGAGGCGAG
TCCCTTTGCCAACACCACCTTCTCCTTTACGGCCCCTCAAGGTGGGGCCT
CTGCCCCTTTCCCCAATTTGGCCGGATTCAGCCAGGCCTTGGCTTCGGCA
GCAGAGGGTGCACGGGAGGAGGATGACGAGCCGCTTGCGCCCGAAGTACA
Ggttagaaaaaaatagcctcggtggtggtatgtacagacggctggcaagt
gtagcgtttatgcaggagtacggggacggcttcggaatcactgatcttca
cgtcatgtctctcgtcacatttgtgttttaatcgctcactcaccacattc
catctaccgcacacatcaaacccttccgtttttattttttttaagGTCCG
TATTGACTACCTGAAGAACTTGCAAGAGCAACGTGACGAGTTCATGAAGG
CCTTCCACGAGGAACGGAAAGCCCTGGTAAAGAAATATGAGGCGCTTTCT
GCCCCCTTGCTCGACAAACGCCGCGCCATCCTGTCGGGGGATGTCGACGT
GGAGAAGAAGGAGGAGGCCTGGGAGACGATTGCGAAGGAAGGCGGCGAGG
GAGGCGACGTAAAGGAGGCGGGAGTTCCTCATTTTTGGTTGCAGGCCATG
GTGAACAGTCGCTTGTTGCGAGGCATGATCGAGGAGGATGACGTGCCGGC
ACTTAAATTTTTGACAGACATTCAGTGTGCGGATAAAGAGGATGGGACAG
GCTTTCAGTTGGATTTCCACTTCGCCCCTAACCCTTACTTTACGAATGCG
GTATTGTCCAAGAGTTATGTCGTGCCCAACCTAATGGAGGATGAAGACGC
CATGTTGGAGTCTACTGAAGGGACGACAATCAATTGGACGTCAACCAAGA
AGAATCTTTGTGTGGAGGAGAAGAGGATGAAACCCAAAGGGAAGAGCCGT
GGAGGTGTGGTGCTCAAGCAGGTGAAGAAGGATAGTTTTTTCCATTGGTT
TACGGCAGTTAATATACCCGAGAGCCCGGAAGGGGTGGACGAGGAGGAGT
ATGAGGAGTTGATGGAACAGgtgcgagtggggaggggaggaagggaggat
gtaaagggataattttgtatagtgaaatgctcactttttctttttttccc
caaccaccagCTTGACCTAGACTATGCCGTCGCCTCTACGCTACGTGAGG
AAATCGTGCCGGAGGCCATCAAGTGGTACCTCGGGGAGGGAGATGATGAA
GAGAGCGAGGATGGTGATTACGAGGAGGAGAGTTCTGAGGAGAGTGAAAG
CGACCCGGAAAGCAGTGACGACGAGCCGCCGCCGCAGCCGgtacgtggat
ggcgaggaaattgagtgggaaagggaggaaggggtgggggtatgaggatg
gagagagagggaagacgactcttcgagggctaaatagtactattgcactt
caattctacatctcgatactaacatatcaacagGCCGGAGGACGGTATCC
TCGTCAGGCGGGGCGGCCGCGGCGTGGTGGGCGTTAGAACGCTTGTGGAA
GCTGTGACAGCGGAGGATAGGGGAGAAATACATTTAGCTTTGAAACAATC
AAGATTTGTTTTTACACTCGCATGCGAGGCGGCCACAAGTACAGCAGCAG
AAGCATCAGCCAAAAAAAAAACAAGCAGAGGGAAGGGGGAAAAGAGAAGG
ATAAAGAAAGGGAATGGGCAGGGCAGAGATGTAGATGGCCAAGGCCAAAG
AAAAATTGCGATTATATTCTCAATCATCATCTACTAGAAGAAAGAATTAC
ACCATTGGTCGACATCTTATTCTTGACTATATCTGTATTTGAATTCCCGT
TCAAATCGCCGTTGCCCCAACGCATCTTCGCGAATTCGTTTGCACTCAAG
AAGACAATAATCACGGTGCACGGTCCACGGGGGGGTTCTCACTCTTGTGT
ATGCGCTCGTCTATTTCTTTGTACTTTCGCCCTTAGCAAGCTGGTTTTGA
AAGCAGTCGTTTGTCTGTTTAATGCTCACAATACAACTCCCCCATGCTTG
CTTCTTTCTCCACCTCCACCTAACG
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protein sequence of NO12G03330.1

>NO12G03330.1-protein ID=NO12G03330.1-protein|Name=NO12G03330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=447bp
MSCGSTGGGHTLSTESEHTTPASPRALEAARLSEGSRKLAMRTKQVSWLP
TLQRSLIEQHLSYTIHPTTRATQAATQKITMADDKNNTEAKEASPFANTT
FSFTAPQGGASAPFPNLAGFSQALASAAEGAREEDDEPLAPEVQVRIDYL
KNLQEQRDEFMKAFHEERKALVKKYEALSAPLLDKRRAILSGDVDVEKKE
EAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFL
TDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLES
TEGTTINWTSTKKNLCVEEKRMKPKGKSRGGVVLKQVKKDSFFHWFTAVN
IPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGEGDDEE
SEDGDYEEESSEESESDPESSDDEPPPQPAGGRYPRQAGRPRRGGR*
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Synonyms
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