NO12G03230, NO12G03230 (gene) Nannochloropsis oceanica

Overview
NameNO12G03230
Unique NameNO12G03230
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2044
Alignment locationchr12:894529..896572 +

Link to JBrowse

Properties
Property NameValue
DescriptionEukaryotic translation initiation factor 2 subunit alpha
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:894529..896572 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO:0003743translation initiation factor activity
GO:0008135translation factor activity, RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR024055TIF2_asu_C
IPR012340NA-bd_OB-fold
IPR024054TIF2_asu_middle
IPR003029Rbsml_prot_S1_RNA-bd_dom
IPR011488TIF_2_asu
IPR022967S1_dom
Homology
[Close]
BLAST of NO12G03230 vs. NCBI_GenBank
Match: EWM25744.1 (eukaryotic translation initiation factor 2 subunit alpha [Nannochloropsis gaditana])

HSP 1 Score: 553.5 bits (1425), Expect = 4.300e-154
Identity = 282/321 (87.85%), Postives = 305/321 (95.02%), Query Frame = 0 
Query:    1 MATEGDEGLPPIARDESTRLQCRFYEEQYPNPESMVMVKVMNIAEMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKDKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADQHGIWLEDLYKKVGWPLYRKHGHAFDAFSKSLLPEGDERYEDVFADLDITPELKNSITTYIKRRLAPKPIKIRADIEVTCFAYEGIEAIRAALQAGLDAPSSSEVDIKLIAPPMYVVTTNTLEKDVGIENLNRVIEKIRAKVTESEGRLEVKMAPKVVSQRDEADLQAMIKRIEEENEEVDGDAPEDA 322
            MA++G+E    +ARDESTRLQCRFYEEQYPNPESMVMVKV+NIA+MAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDK KGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVAD H +WLEDL KKV WPLYRKHGHAFDAF+KSLLPEGD+RYEDVFA LDI+PE+K+SI TYIKRRLAPKPIKIRADI+VTCFAYEGIEA+RAALQAGL+ P SSEV+IKLIAPPMYVVTTNTLE+D+GIENLN+VIE+IRA++  SEGRLE+KM PKVVSQRDEADLQAMIKRIEEENEEVDGDAPEDA
Sbjct:   53 MASDGEES-TQMARDESTRLQCRFYEEQYPNPESMVMVKVINIADMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKKKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADMHHLWLEDLCKKVAWPLYRKHGHAFDAFTKSLLPEGDDRYEDVFAGLDISPEVKHSIVTYIKRRLAPKPIKIRADIDVTCFAYEGIEAVRAALQAGLETPCSSEVEIKLIAPPMYVVTTNTLEQDIGIENLNQVIERIRARIVASEGRLEIKMEPKVVSQRDEADLQAMIKRIEEENEEVDGDAPEDA 372
[Close]
BLAST of NO12G03230 vs. NCBI_GenBank
Match: OEU20597.1 (eukaryotic translation initiation factor 2 subunit alpha [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 371.7 bits (953), Expect = 2.300e-99
Identity = 198/302 (65.56%), Postives = 240/302 (79.47%), Query Frame = 0 
Query:   20 LQCRFYEEQYPNPESMVMVKVMNIAEMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKDKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADQHGIWLEDLYKKVGWPLYRKHGHAFDAFSKSLLPEGDERYEDVFADLDITPELKNSITTYIKRRLAPKPIKIRADIEVTCFAYEGIEAIRAALQAGLDAPS-SSEVDIKLIAPPMYVVTTNTLEKDVGIENLNRVIEKIRAKVTESEGRLEVKMAPKVVSQRDEADLQAMIKRIEEENEEVDGDAPED 321
            L CRFYE +YP  ES+VMV V NIA+M A V LLEY+ IEGMIL SELSRRRIRSI KLIRVN+ EVV VLRVDK+KGYIDLSKRRVSP+DV  CEERYNKAKAVH V+RH+A Q   +LED+Y+K+GWPLY+K+GHAFDAF  S+  E  +   D F DLDI   LK+ + TYI RRLAP+PIKIR+DIEV+CF YEGI+AIRAAL AG+D  S  + V I+LIAPP+YV++T TLEK+VG+  LN+VIE I+ K+T   G+++VKMAPK VS ++E +LQ M++R   ENEEVDGDA ED
Sbjct:   40 LHCRFYENKYPEIESVVMVNVRNIADMGAYVSLLEYDGIEGMILLSELSRRRIRSIHKLIRVNRNEVVMVLRVDKEKGYIDLSKRRVSPEDVQACEERYNKAKAVHGVMRHLATQRKYYLEDVYEKIGWPLYKKYGHAFDAFKLSISEE--KGVGDPFEDLDIPQGLKDELKTYILRRLAPQPIKIRSDIEVSCFTYEGIDAIRAALFAGMDLGSEQNPVKIRLIAPPLYVLSTTTLEKEVGVGLLNQVIEVIKEKITSKGGKIDVKMAPKAVSVKEETELQEMMERFALENEEVDGDAQED 339
[Close]
BLAST of NO12G03230 vs. NCBI_GenBank
Match: GAX26935.1 (translation initiation factor 2 subunit 1 [Fistulifera solaris])

HSP 1 Score: 369.8 bits (948), Expect = 8.700e-99
Identity = 198/320 (61.88%), Postives = 247/320 (77.19%), Query Frame = 0 
Query:    3 TEGDEGLPPIARDESTR-LQCRFYEEQYPNPESMVMVKVMNIAEMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKDKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADQHGIWLEDLYKKVGWPLYRKHGHAFDAFSKSLLPEGDERYEDVFADLDITPELKNSITTYIKRRLAPKPIKIRADIEVTCFAYEGIEAIRAALQAGLD-APSSSEVDIKLIAPPMYVVTTNTLEKDVGIENLNRVIEKIRAKVTESEGRLEVKMAPKVVSQRDEADLQAMIKRIEEENEEVDGDAPED 321
            TE D G   I   E  + L CRFYEE+YP  ES+VMV V NIA+M A V L+EY++IEGMIL SELSRRRIRSI KLIRVN+ EVV VLRVDK+KGYIDLSKRRVSP+DV  CE+R+NKAKAVH VLRHVAD+    LEDLY+++GWPLY+K+GHA+DAF  ++    D+   D FAD+D+  +LK+ I +YI RRLAP+P KIR+DIEV+CF YEGI+AI+AAL AG+  A  +S + IKLIAPP+YV++T TLEKDVGI  LN  I  I+  +T   G+L+VKMAPKVV  ++E +L+ MI R+  EN+EVDGDAPE+
Sbjct:   17 TEEDNGGFRIYLGEDRKNLTCRFYEEKYPEIESVVMVNVRNIADMGAYVSLMEYDNIEGMILLSELSRRRIRSIHKLIRVNRNEVVMVLRVDKEKGYIDLSKRRVSPEDVAACEDRFNKAKAVHGVLRHVADRRKYHLEDLYERIGWPLYKKYGHAYDAFKLAI--SDDKTVADPFADIDVPQDLKDEIKSYILRRLAPQPTKIRSDIEVSCFTYEGIDAIQAALSAGMAVATDNSPIKIKLIAPPIYVLSTTTLEKDVGIALLNDAIAAIKEVITSKGGKLDVKMAPKVVGDKEENELEEMINRLNMENQEVDGDAPEE 334
[Close]
BLAST of NO12G03230 vs. NCBI_GenBank
Match: GAX11144.1 (translation initiation factor 2 subunit 1 [Fistulifera solaris])

HSP 1 Score: 364.8 bits (935), Expect = 2.800e-97
Identity = 190/307 (61.89%), Postives = 242/307 (78.83%), Query Frame = 0 
Query:   15 DESTRLQCRFYEEQYPNPESMVMVKVMNIAEMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKDKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADQHGIWLEDLYKKVGWPLYRKHGHAFDAFSKSLLPEGDERYEDVFADLDITPELKNSITTYIKRRLAPKPIKIRADIEVTCFAYEGIEAIRAALQAGLD-APSSSEVDIKLIAPPMYVVTTNTLEKDVGIENLNRVIEKIRAKVTESEGRLEVKMAPKVVSQRDEADLQAMIKRIEEENEEVDGDAPED 321
            ++   L CRFYEE+YP  ES+VMV V NIA+M A V L+EY++IEGMIL SELSRRRIRSI KLIRVN+ EVV VLRVDK+KGYIDLSKRRVSP+DV  CE+R+NKAKAVH VLRHVAD+    LEDLY+++GWPLY+K+GHA+DAF  ++    D+   D FA++D+  +LK+ I +YI RRLAP+P KIR+DIEV+CF YEGI+AI+AAL AG+  A  +S + IKLIAPP+YV++T TLEK+VGI  LN  I  I+  +T   G+L+VKMAPKVV  ++E +L+ MI R+  EN+EVDGDAPE+
Sbjct:   30 EDRKNLTCRFYEEKYPEIESVVMVNVRNIADMGAYVSLMEYDNIEGMILLSELSRRRIRSIHKLIRVNRNEVVMVLRVDKEKGYIDLSKRRVSPEDVAACEDRFNKAKAVHGVLRHVADRRKYHLEDLYERIGWPLYKKYGHAYDAFKLAI--SDDKTVADPFAEIDVPQDLKDEIKSYILRRLAPQPTKIRSDIEVSCFTYEGIDAIQAALSAGMAVATDNSPIKIKLIAPPIYVLSTTTLEKEVGIALLNDAIAAIKEVITLKGGKLDVKMAPKVVGDKEENELEEMINRLNMENQEVDGDAPEE 334
[Close]
BLAST of NO12G03230 vs. NCBI_GenBank
Match: XP_002179076.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49774.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 360.9 bits (925), Expect = 4.100e-96
Identity = 191/307 (62.21%), Postives = 241/307 (78.50%), Query Frame = 0 
Query:   15 DESTRLQCRFYEEQYPNPESMVMVKVMNIAEMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKDKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADQHGIWLEDLYKKVGWPLYRKHGHAFDAFSKSLLPEGDERYEDVFADLDITPELKNSITTYIKRRLAPKPIKIRADIEVTCFAYEGIEAIRAALQAGL-DAPSSSEVDIKLIAPPMYVVTTNTLEKDVGIENLNRVIEKIRAKVTESEGRLEVKMAPKVVSQRDEADLQAMIKRIEEENEEVDGDAPED 321
            D+ + L+CRFYE +YP  ES+VMV V NIA+M A V L+EY +IEGMIL SELSRRRIRSI KLIRVN+ EVV VLRVDK+KGYIDLSKRRVSP+DV  CEER+NKAKAVH VLRH+AD+   +LEDLY+K+GWPL RK+GHAFDAF  ++  E  +   + F +LDI  +LK+ +TTYI RRLAP+PIKIR+DIEV+CF+YEGI+AIR AL AG+     +S + IKLIAPP+YV++T TL+KD GI  L+  I+ IR  +    G+++VKM PK VS ++E +LQAM+ R+  ENEEVDGDAPE+
Sbjct:   15 DDKSNLECRFYESKYPEIESVVMVNVRNIADMGAYVSLMEYGNIEGMILLSELSRRRIRSIHKLIRVNRNEVVMVLRVDKEKGYIDLSKRRVSPEDVAACEERFNKAKAVHGVLRHIADRRKYYLEDLYEKIGWPLDRKYGHAFDAFKLAISDE--KGVVNPFDELDIPQDLKDELTTYILRRLAPQPIKIRSDIEVSCFSYEGIDAIREALFAGMAKGTENSVIKIKLIAPPIYVLSTTTLDKDAGIALLHSAIDAIRDVIALKGGKMDVKMPPKAVSIKEENELQAMMDRLALENEEVDGDAPEE 319
[Close]
BLAST of NO12G03230 vs. NCBI_GenBank
Match: XP_009040074.1 (hypothetical protein AURANDRAFT_72304 [Aureococcus anophagefferens] >EGB05173.1 hypothetical protein AURANDRAFT_72304 [Aureococcus anophagefferens])

HSP 1 Score: 351.3 bits (900), Expect = 3.200e-93
Identity = 187/306 (61.11%), Postives = 231/306 (75.49%), Query Frame = 0 
Query:   16 ESTRLQCRFYEEQYPNPESMVMVKVMNIAEMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKDKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADQHGIWLEDLYKKVGWPLYRKHGHAFDAFSKSLLPEGDERYEDVFADLDITPELKNSITTYIKRRLAPKPIKIRADIEVTCFAYEGIEAIRAALQAGLDAP-SSSEVDIKLIAPPMYVVTTNTLEKDVGIENLNRVIEKIRAKVTESEGRLEVKMAPKVVSQRDEADLQAMIKRIEEENEEVDGDAPED 321
            ES RL+CRFYEE +P  ES+VMV V NIAEM A V LLEYN+IEGMIL SELSRRRIRSI KLIRVN+ EVV VLRVDK+KGYIDLSKRRVS +DV KCEERYNKAKAVH V+RHVAD+ G  LE+LYK VGWPLY+K+GHA+DAF   L  E ++ +E   A   +  E K  +T Y+K++L+P+PIK+RADIEVTCF YEGI AIR AL  G +A      + I+LIAPPMYV+TT TL+KD+G++ L   I  +  K+    G++++KMAPK VS R+E +LQAM+ R+  EN E DGD  ++
Sbjct:    6 ESKRLECRFYEEPFPELESLVMVNVRNIAEMGAYVTLLEYNNIEGMILLSELSRRRIRSINKLIRVNRNEVVMVLRVDKEKGYIDLSKRRVSAEDVAKCEERYNKAKAVHRVMRHVADRCGQTLEELYKIVGWPLYKKYGHAYDAFKLCLSGENEDVFE---ACPSMDTETKACLTDYVKKKLSPQPIKVRADIEVTCFTYEGINAIREALFKGQEASIDDCPIQIRLIAPPMYVMTTMTLDKDLGVQTLTAAIAAVTDKILLKGGKIDIKMAPKAVSAREETELQAMMDRLAAENAEQDGDDDDE 308
[Close]
BLAST of NO12G03230 vs. NCBI_GenBank
Match: XP_002292230.1 (eukaryotic translation initiation factor 2 alpha subunit [Thalassiosira pseudonana CCMP1335] >EED90205.1 eukaryotic translation initiation factor 2 alpha subunit [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 346.7 bits (888), Expect = 7.900e-92
Identity = 180/311 (57.88%), Postives = 235/311 (75.56%), Query Frame = 0 
Query:   15 DESTRLQCRFYEEQYPNPESMVMVKVMNIAEMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKDKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADQHGIWLEDLYKKVGWPLYRKHGHAFDAFSKSLLPE----GDERYEDVFADLDITPELKNSITTYIKRRLAPKPIKIRADIEVTCFAYEGIEAIRAALQAGLD-APSSSEVDIKLIAPPMYVVTTNTLEKDVGIENLNRVIEKIRAKVTESEGRLEVKMAPKVVSQRDEADLQAMIKRIEEENEEVDGDAPED 321
            ++   L CRFYE +YP  ES+VMV V  IA+M A V LLEYN+IEG+IL SELSRRRIRSI KLIRV + EV  VLRVDKDKGYIDLSKRRVSP+DV  CE+++NKAKAVH VLRH+AD+   +LEDL +++ WPLYRK+GHA+DAF  +L  E    G+    D F  LD+ P++   +  YI+RRLAP+PIKIRAD+EV+CF Y+GI+AIR AL AG+     +S + I+LIAPP+YV++T TLEK+ GI  L + I+ I  K++   G+++VKMAPK VS ++E +LQAM++R+E EN EV+GD PE+
Sbjct:   27 EDKHNLDCRFYEAKYPEIESLVMVNVRTIADMGAYVSLLEYNNIEGLILLSELSRRRIRSINKLIRVGRNEVAMVLRVDKDKGYIDLSKRRVSPEDVAACEDKFNKAKAVHGVLRHLADRRKFYLEDLCERIAWPLYRKYGHAYDAFKIALADEAASGGEAAENDPFTSLDVPPDVIEELKLYIRRRLAPQPIKIRADVEVSCFTYDGIDAIRDALFAGIAVGTENSPIKIRLIAPPIYVLSTMTLEKEAGIALLQKSIDVILEKISAKGGKMDVKMAPKAVSLKEETELQAMMERLELENREVEGDEPEE 337
[Close]
BLAST of NO12G03230 vs. NCBI_GenBank
Match: XP_009036419.1 (hypothetical protein AURANDRAFT_69770 [Aureococcus anophagefferens] >EGB09323.1 hypothetical protein AURANDRAFT_69770 [Aureococcus anophagefferens])

HSP 1 Score: 345.9 bits (886), Expect = 1.300e-91
Identity = 186/301 (61.79%), Postives = 227/301 (75.42%), Query Frame = 0 
Query:   16 ESTRLQCRFYEEQYPNPESMVMVKVMNIAEMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKDKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADQHGIWLEDLYKKVGWPLYRKHGHAFDAFSKSLLPEGDERYEDVFADLDITPELKNSITTYIKRRLAPKPIKIRADIEVTCFAYEGIEAIRAALQAGLDAP-SSSEVDIKLIAPPMYVVTTNTLEKDVGIENLNRVIEKIRAKVTESEGRLEVKMAPKVVSQRDEADLQAMIKRIEEENEEVDG 316
            +S RL+CRFYEE +P  ES+VMV V NIAEM A V LLEYN+IEGMIL SELSRRRIRSI KLIRVN+ EVV VLRVDK+KGYIDLSKRRVS +DV KCEERYNKAKAVH V+RHVAD+ G  LE+LY+ VGWPLY+K+GHA+DAF   L  E ++ +E   A   +  E K  +T Y+K++L+P+PIK+RADIEVTCF YEGI AIR AL  G +A      + IKLIAPPMYV+TT TL+KD+GI+ L   I  +   +    G+++VKMAPK VS R+E +LQAM+ R+  EN E DG
Sbjct:    6 DSKRLECRFYEEPFPELESLVMVNVRNIAEMGAYVTLLEYNNIEGMILLSELSRRRIRSINKLIRVNRNEVVMVLRVDKEKGYIDLSKRRVSAEDVAKCEERYNKAKAVHRVMRHVADRCGQTLEELYQIVGWPLYKKYGHAYDAFKLCLSGETEDVFE---ACPGMDTETKACLTDYVKKKLSPQPIKVRADIEVTCFTYEGINAIREALLKGQEASIDDCPIQIKLIAPPMYVMTTMTLDKDLGIQTLTAAIAAVADMILIKGGKIDVKMAPKAVSAREETELQAMMDRLAAENAEQDG 303
[Close]
BLAST of NO12G03230 vs. NCBI_GenBank
Match: EXX71368.1 (Sui2p [Rhizophagus irregularis DAOM 197198w] >PKC59325.1 hypothetical protein RhiirA1_427023 [Rhizophagus irregularis] >PKK72548.1 hypothetical protein RhiirC2_742496 [Rhizophagus irregularis] >PKY21109.1 hypothetical protein RhiirB3_409102 [Rhizophagus irregularis] >POG67362.1 translation initiation factor eIF2 alpha subunit [Rhizophagus irregularis DAOM 181602=DAOM 197198])

HSP 1 Score: 340.5 bits (872), Expect = 5.700e-90
Identity = 175/303 (57.76%), Postives = 231/303 (76.24%), Query Frame = 0 
Query:   19 RLQCRFYEEQYPNPESMVMVKVMNIAEMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKDKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADQHGIWLEDLYKKVGWPLYRKHGHAFDAFSKSLLPEGDERYEDVFADLDITPELKNSITTYIKRRLAPKPIKIRADIEVTCFAYEGIEAIRAALQAGLDAPSSS-EVDIKLIAPPMYVVTTNTLEKDVGIENLNRVIEKIRAKVTESEGRLEVKMAPKVVSQRDEADLQAMIKRIEEENEEVDGDAPED 321
            + QCR YEE++P  E +VMV V  IAEM A V LLEY++IEGMIL SELSRRRIRSI+KLIRV + EVV VLRVDKDKGYIDLSKRRVSP+DV K EE++NK+KAVHS++RHVA++  + LEDLY+K+GWPLY+K+GHA++AF  ++        E VF  L+ITPE+   +   IKRRL P+PIKIRADIEVTCF Y+GI+AI++AL+AG    +   ++ +KL+APP+YV+ TN L+K++GIE L + IE +R  + +S G L VKM P+ VS+ D+ +L A++ R+E+EN EV GD   D
Sbjct:    6 QFQCRMYEERFPEKEDLVMVNVRQIAEMGAYVKLLEYDNIEGMILLSELSRRRIRSIQKLIRVGRNEVVVVLRVDKDKGYIDLSKRRVSPEDVAKAEEKFNKSKAVHSIMRHVAEKQNLVLEDLYQKIGWPLYKKYGHAYEAFKLAITEP-----EKVFEGLEITPEISEELLNNIKRRLTPQPIKIRADIEVTCFGYDGIDAIKSALKAGEACETGDIQIKVKLVAPPLYVMITNALDKNMGIELLGKAIETVRDGIEKSGGTLTVKMKPRAVSETDDLELAALMARVEKENAEVSGDEDTD 303
[Close]
BLAST of NO12G03230 vs. NCBI_GenBank
Match: PKY46081.1 (hypothetical protein RhiirA4_402050 [Rhizophagus irregularis])

HSP 1 Score: 340.5 bits (872), Expect = 5.700e-90
Identity = 175/303 (57.76%), Postives = 231/303 (76.24%), Query Frame = 0 
Query:   19 RLQCRFYEEQYPNPESMVMVKVMNIAEMAAEVILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKDKGYIDLSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADQHGIWLEDLYKKVGWPLYRKHGHAFDAFSKSLLPEGDERYEDVFADLDITPELKNSITTYIKRRLAPKPIKIRADIEVTCFAYEGIEAIRAALQAGLDAPSSS-EVDIKLIAPPMYVVTTNTLEKDVGIENLNRVIEKIRAKVTESEGRLEVKMAPKVVSQRDEADLQAMIKRIEEENEEVDGDAPED 321
            + QCR YEE++P  E +VMV V  IAEM A V LLEY++IEGMIL SELSRRRIRSI+KLIRV + EVV VLRVDKDKGYIDLSKRRVSP+DV K EE++NK+KAVHS++RHVA++  + LEDLY+K+GWPLY+K+GHA++AF  ++        E VF  L+ITPE+   +   IKRRL P+PIKIRADIEVTCF Y+GI+AI++AL+AG    +   ++ +KL+APP+YV+ TN L+K++GIE L + IE +R  + +S G L VKM P+ VS+ D+ +L A++ R+E+EN EV GD   D
Sbjct:    6 QFQCRMYEERFPEKEDLVMVNVRQIAEMGAYVKLLEYDNIEGMILLSELSRRRIRSIQKLIRVGRNEVVVVLRVDKDKGYIDLSKRRVSPEDVAKAEEKFNKSKAVHSIMRHVAEKQNLVLEDLYQKIGWPLYKKYGHAYEAFKLAITEP-----EKVFEGLEITPEISEELLNNIKRRLTPQPIKIRADIEVTCFGYDGIDAIKSALKAGEACETGDIQIKVKLVAPPLYVMITNALDKNMGIELLGKAIETVRDGIEKSGGTLTVKMKPRAVSETDDIELAALMARVEKENAEVSGDEDTD 303
The following BLAST results are available for this feature:
BLAST of NO12G03230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25744.14.300e-15487.85eukaryotic translation initiation factor 2 subunit... [more]
OEU20597.12.300e-9965.56eukaryotic translation initiation factor 2 subunit... [more]
GAX26935.18.700e-9961.88translation initiation factor 2 subunit 1 [Fistuli... [more]
GAX11144.12.800e-9761.89translation initiation factor 2 subunit 1 [Fistuli... [more]
XP_002179076.14.100e-9662.21predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_009040074.13.200e-9361.11hypothetical protein AURANDRAFT_72304 [Aureococcus... [more]
XP_002292230.17.900e-9257.88eukaryotic translation initiation factor 2 alpha s... [more]
XP_009036419.11.300e-9161.79hypothetical protein AURANDRAFT_69770 [Aureococcus... [more]
EXX71368.15.700e-9057.76Sui2p [Rhizophagus irregularis DAOM 197198w] >PKC5... [more]
PKY46081.15.700e-9057.76hypothetical protein RhiirA4_402050 [Rhizophagus i... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL129nonsL129Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR010ngnoR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010262NSK010262Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G03230.1NO12G03230.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592736gene_5499Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100087g4gene4787Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G03230.1NO12G03230.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G03230 ID=NO12G03230|Name=NO12G03230|organism=Nannochloropsis oceanica|type=gene|length=2044bp
GGCCGTTCATCATGCCTGCTTCTTTCCGGCATAGCGGTGTGCCTATGTCA
CCAGCTTATTTACCTTGAGTCTCACCTATGCTCATCGAGGTGAACATGCC
AGCCAGTATCCTCTCTATACGTGCTCCGCGGTCCTGCTCTCTGTCAACCT
CTCGCAATTCCCACCCACCCCTGTGCCATACCACAGTCAAGGAGCAGCGC
AACACCACTTCTTCCTACACGTCCATCAATAGAAGCGTCACTCATGgtac
attcttctcccacctttctcccctccccccaaaccaatgtctcctattct
tctattcctattgctttcatccctctattcctaacattctgcccccttgc
ttcaccataaccatcatcataataagGCGACGGAGGGCGATGAAGGCCTC
CCACCTATCGCACGGGACGAGTCCACTCGCCTGCAATGCCGGTTTTACGA
AGAGCAGTACCCTAACCCAGAGAGCATGGTGATGGTGAAAGTCATGAACA
TCGCTGAGATGGCGGCGGAAGTGATCCTGCTTGAGTACAACGACATTGAG
gtgagggctcccggggggagagagggaaggaggggagggatgtgaaacag
gcggcacgcaagagagaaaagaatttgaactcttcgtcgttgggtgtata
agagtaggctgttcgccctctgggcctttcttctcacacggcccctctct
cccaccttcccccttactttataacagGGCATGATCCTGCACTCTGAGCT
GTCCCGACGCCGCATCCGTTCCATCAAAAAGCTGATCCGTGTGAACAAGC
TGGAGGTGGTGTCGGTACTGCGGGTGGACAAAGATAAAGgtaaatttctg
cgtgtacattgttgtgcctctacctacctctattgaacaaccatacgagc
agcgagcagtgagcgcaaccccttcacctatgctgatccttccctccctc
ccttcctcttccctcgccagGCTACATCGATCTCTCCAAGCGCCGGGTTT
CCCCCGATGACGTTATTAAATGCGAAGAACGTTACAACAAAGCTAAGGCG
GTGCACTCCGTCCTTCGCCACGTGGCCGACCAACACGGCATCTGGCTCGA
GGATCTGTACAAGAAGGTGGGCTGGCCCCTCTACCGCAAGCATGGACACG
CCTTCGATGCTTTCTCCAAGgtacgtgcctatgtccttttcgtctttcct
cccgttcttcctttaatctgttcagcggatatggaagagctgtctcagca
ctcattaacacctccctccctccctccctccctccctccctcctccttac
ccccccagTCACTCCTTCCCGAAGGCGACGAGCGGTACGAAGACGTGTTT
GCTGACCTTGATATCACCCCTGAGCTGAAAAACAGCATTACTACGTACAT
TAAACGTCGCCTCGCGCCCAAGCCAATCAAAATCCGTGCTGATATTGAAG
TGACGTGCTTTGCTTACGAGGGGATTGAAGCCATCCGTGCGGCGTTGCAG
GCGGGCTTGGACGCCCCTTCTTCGAGCGAGGTGGATATAAAACTAATTGC
GCCACCAATgtaagcgtcggggagggaaggagaaggcctttctgtctatt
ttgtcttgtctctttcgttttgtctgccttctgtctgtctgtccttaact
ccttctgcctatattgctcacttaccctccctctctcattacctcttcta
ctactagGTATGTCGTCACTACCAACACGCTAGAGAAGGATGTGGGCATC
GAGAACCTGAACCGAGTGATTGAGAAAATCCGAGCGAAGGTTACCGAAAG
TGAGGGGAGGTTAGAAGTCAAGATGGCACCCAAGGTGGTAAGCCAGCGGG
ACGAGGCGGACTTGCAGGCCATGATCAAGAGGATTGAAGAAGAGAATGAG
GAGGTGGATGGTGATGCCCCGGAGGATGCATAAAGAGAGAAAGGGGAGAA
AGAAAGGAGGGACGGAGGGAGGAGGTGGGGAGGTTGGTCCAGAGCGGAAG
GAACAGGCGAGACATATGCCAGCAGAGGGCGCAAAATAAAAATT
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protein sequence of NO12G03230.1

>NO12G03230.1-protein ID=NO12G03230.1-protein|Name=NO12G03230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=322bp
MATEGDEGLPPIARDESTRLQCRFYEEQYPNPESMVMVKVMNIAEMAAEV
ILLEYNDIEGMILHSELSRRRIRSIKKLIRVNKLEVVSVLRVDKDKGYID
LSKRRVSPDDVIKCEERYNKAKAVHSVLRHVADQHGIWLEDLYKKVGWPL
YRKHGHAFDAFSKSLLPEGDERYEDVFADLDITPELKNSITTYIKRRLAP
KPIKIRADIEVTCFAYEGIEAIRAALQAGLDAPSSSEVDIKLIAPPMYVV
TTNTLEKDVGIENLNRVIEKIRAKVTESEGRLEVKMAPKVVSQRDEADLQ
AMIKRIEEENEEVDGDAPEDA*
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Synonyms
Publications