NO12G03110, NO12G03110 (gene) Nannochloropsis oceanica

Overview
NameNO12G03110
Unique NameNO12G03110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3412
Alignment locationchr12:852882..856293 -

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Properties
Property NameValue
DescriptionViral protein TPX
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:852882..856293 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036278Sialidase_sf
Homology
BLAST of NO12G03110 vs. NCBI_GenBank
Match: EWM23483.1 (putative lipase, partial [Nannochloropsis gaditana])

HSP 1 Score: 452.6 bits (1163), Expect = 2.500e-123
Identity = 219/299 (73.24%), Postives = 250/299 (83.61%), Query Frame = 0
Query:   24 MRISSSLFALVLLGVTNIVSTVSQECPRLYLKAKVHPNPKRGLLAGRGKAKITVTLHSKDPVDNLEFQLNLPNGITVERTATRPSPKPSTPPEIVENVDGTTAIYWLGYDLTKRKSGKRRFSAKVMVDECAPEALAVEAFAYLVNATEASCITPLARPAVLRVRYPKVNKAGTCAPTPAPTVNPTQPFVLFGEGQRFSQGGRLAPFQGRRLTAHSGVNMDESISASDRADNRQLQSIDTPEACFEYCSLNGGQTAPFLFSWNTVTSQCICCVEEVCTPLVFDPDFDVYEVMVPLTLAPT 323
            M+ISSS F + LLG T+I++TVSQECPRL+LKAKV PN KRG+LAG+G+AKITVTL SKDPVDNLEFQLNLPNG++VERTA RPS KP  PP+IVE+ DGTTAIYWLG   TK K GKRRF  KV  DECAP+ LAV+AFAYLVNAT+ASCITPLA PA+++VRY K+  A TCAPTPAPT+NPTQPFVL GEGQRFSQGGRLAPFQ RRL+AH G +    I +  RA +R LQSIDTPEAC+EYCSLN G+  PFLFSWNTVTSQC CCV  VCTPLVFDPDF+VYE ++P T +PT
Sbjct:    1 MKISSSAFLVALLGFTSILATVSQECPRLFLKAKVRPNAKRGILAGKGQAKITVTLKSKDPVDNLEFQLNLPNGLSVERTAMRPSSKPYAPPQIVEDTDGTTAIYWLGVAFTKSKGGKRRFRVKVKADECAPDTLAVDAFAYLVNATDASCITPLASPAIVKVRYSKLKNAATCAPTPAPTINPTQPFVLLGEGQRFSQGGRLAPFQDRRLSAHPGSSKHGGIMSFGRAGDRHLQSIDTPEACYEYCSLNSGEVVPFLFSWNTVTSQCFCCV-GVCTPLVFDPDFNVYEALLPKTSSPT 298          
BLAST of NO12G03110 vs. NCBI_GenBank
Match: XP_005852708.1 (hypothetical protein NGA_0705900, partial [Nannochloropsis gaditana CCMP526] >EKU23125.1 hypothetical protein NGA_0705900, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 438.7 bits (1127), Expect = 3.800e-119
Identity = 212/299 (70.90%), Postives = 248/299 (82.94%), Query Frame = 0
Query:   24 MRISSSLFALVLLGVTNIVSTVSQECPRLYLKAKVHPNPKRGLLAGRGKAKITVTLHSKDPVDNLEFQLNLPNGITVERTATRPSPKPSTPPEIVENVDGTTAIYWLGYDLTKRKSGKRRFSAKVMVDECAPEALAVEAFAYLVNATEASCITPLARPAVLRVRYPKVNKAGTCAPTPAPTVNPTQPFVLFGEGQRFSQGGRLAPFQGRRLTAHSGVNMDESISASDRADNRQLQSIDTPEACFEYCSLNGGQTAPFLFSWNTVTSQCICCVEEVCTPLVFDPDFDVYEVMVPLTLAPT 323
            M+ SSS F + LLG T+I++TVSQECPRL+LKAKV PN KRG+LAG+G+AKITVTL SKDPVDNLEFQLNLPNG++VERTA RPS KP TPP+IVE+ DGTT+IYWLG   TK K GKRR+   +  DECAPE LAV+AFAYLVNAT+ASCITPLA PA+++VRY K+  A TCAPTPAPT+NPTQPFVL G+GQRFSQGGRLAPFQ RRL+A+   +   SI A  +A +R LQSIDTP+AC+EYCSLN G+  PFLFSWNTVTSQC CCV  VCTPLVFDPD +VYE ++P T +PT
Sbjct:  132 MKFSSSGFLVALLGFTSILTTVSQECPRLFLKAKVRPNAKRGILAGKGQAKITVTLKSKDPVDNLEFQLNLPNGLSVERTAMRPSSKPYTPPQIVEDTDGTTSIYWLGVAFTKSKGGKRRYRVNMKADECAPETLAVDAFAYLVNATDASCITPLASPAIVKVRYSKLKNAATCAPTPAPTINPTQPFVLLGKGQRFSQGGRLAPFQDRRLSAYPASSKHGSIMALGQAGHRHLQSIDTPQACYEYCSLNSGEVVPFLFSWNTVTSQCFCCV-GVCTPLVFDPDSNVYEALLPKTCSPT 429          
BLAST of NO12G03110 vs. NCBI_GenBank
Match: EWM23769.1 (hypothetical protein Naga_100411g1 [Nannochloropsis gaditana])

HSP 1 Score: 410.2 bits (1053), Expect = 1.400e-110
Identity = 199/300 (66.33%), Postives = 237/300 (79.00%), Query Frame = 0
Query:   18 HKAS-STMRISSSLFALVLLGVTNIVSTVSQECPRLYLKAKVHPNPKRGLLAGRGKAKITVTLHSKDPVDNLEFQLNLPNGITVERTATRPSPKPSTPPEIVENVDGTTAIYWLGYDLTKRKSGKRRFSAKVMVDECAPEALAVEAFAYLVNATEASCITPLARPAVLRVRYPKVNKAGTCAPTPAPTVNPTQPFVLFGEGQRFSQGGRLAPFQGRRLTAHSGVNMDESISASDRADNRQLQSIDTPEACFEYCSLNGGQTAPFLFSWNTVTSQCICCVEEVCTPLVFDPDFDVYEVMVP 317
            HK++   M+  S +F + LLG  +I++TVSQECPRL L A V PNP+RG++AG+GKAKITV L + DPVDN+EFQLNLP+G++VERT+ RPS KP TPP+IVE+ DG TAI W G   TKRK GKRRF  KV  D+CAPE LAV AFAYL+NAT+ SCITPLA PA+++VRY K NK  TCAPTPAPTVNPTQPFVL GEG RFSQG RLAPF+ RRL  H+G+N  E I A    ++RQLQSIDTPEAC+EYCSLN G+  PFLFSWNTVTSQC CC   VCTPL+ DPD++VYE ++P
Sbjct:   25 HKSTHPKMKDFSCVFLVALLGFGSILTTVSQECPRLSLTANVRPNPRRGIVAGKGKAKITVILKTNDPVDNMEFQLNLPDGLSVERTSMRPSSKPYTPPQIVEDADGVTAISWQGLAFTKRKGGKRRFRVKVKADQCAPETLAVNAFAYLMNATDTSCITPLANPAIVKVRYMKRNKDATCAPTPAPTVNPTQPFVLLGEGLRFSQGERLAPFEDRRLLLHTGINRHEGIIARYHPEDRQLQSIDTPEACYEYCSLNAGKEVPFLFSWNTVTSQCFCCA-GVCTPLIVDPDYNVYEALLP 323          
BLAST of NO12G03110 vs. NCBI_GenBank
Match: EWM20327.1 (hypothetical protein Naga_100406g12, partial [Nannochloropsis gaditana])

HSP 1 Score: 409.8 bits (1052), Expect = 1.900e-110
Identity = 198/300 (66.00%), Postives = 237/300 (79.00%), Query Frame = 0
Query:   18 HKAS-STMRISSSLFALVLLGVTNIVSTVSQECPRLYLKAKVHPNPKRGLLAGRGKAKITVTLHSKDPVDNLEFQLNLPNGITVERTATRPSPKPSTPPEIVENVDGTTAIYWLGYDLTKRKSGKRRFSAKVMVDECAPEALAVEAFAYLVNATEASCITPLARPAVLRVRYPKVNKAGTCAPTPAPTVNPTQPFVLFGEGQRFSQGGRLAPFQGRRLTAHSGVNMDESISASDRADNRQLQSIDTPEACFEYCSLNGGQTAPFLFSWNTVTSQCICCVEEVCTPLVFDPDFDVYEVMVP 317
            HK++   M+  S +F + LLG  +I++T+SQECPRL L A V PNP+RG++AG+G AKITV L S DPVDN+EFQLNLP+G++VERTA RPS KP TPP+IVE+ DG TAI W G   TKRK GKRRF  KV  D+CAPE LAV AFAYL+NAT+ SCITPLA PA+++VRY K NK  TCAPTPAPTVNPTQPFVL GEG RFSQG RLAPF+ RRL+ H+G+N  E I A    ++RQLQSIDTPEAC+EYCSLNGG+  PFLFSWN +TSQC CC   VCTPL+ DPD++VYE ++P
Sbjct:   25 HKSTHPKMKDFSCVFLVALLGFGSILTTISQECPRLSLTANVRPNPRRGIVAGKGMAKITVMLRSNDPVDNVEFQLNLPDGLSVERTAIRPSSKPYTPPQIVEDADGVTAISWQGLTFTKRKGGKRRFRVKVKADQCAPETLAVNAFAYLMNATDTSCITPLANPAIVKVRYLKRNKDATCAPTPAPTVNPTQPFVLLGEGLRFSQGERLAPFEDRRLSLHTGINRHEDIFARYHPEDRQLQSIDTPEACYEYCSLNGGEEVPFLFSWNIMTSQCFCCA-GVCTPLIVDPDYNVYEALLP 323          
BLAST of NO12G03110 vs. NCBI_GenBank
Match: EWM20839.1 (secreted protein [Nannochloropsis gaditana])

HSP 1 Score: 409.1 bits (1050), Expect = 3.200e-110
Identity = 195/287 (67.94%), Postives = 230/287 (80.14%), Query Frame = 0
Query:   30 LFALVLLGVTNIVSTVSQECPRLYLKAKVHPNPKRGLLAGRGKAKITVTLHSKDPVDNLEFQLNLPNGITVERTATRPSPKPSTPPEIVENVDGTTAIYWLGYDLTKRKSGKRRFSAKVMVDECAPEALAVEAFAYLVNATEASCITPLARPAVLRVRYPKVNKAGTCAPTPAPTVNPTQPFVLFGEGQRFSQGGRLAPFQGRRLTAHSGVNMDESISASDRADNRQLQSIDTPEACFEYCSLNGGQTAPFLFSWNTVTSQCICCVEEVCTPLVFDPDFDVYEVMVP 317
            +  +V LG+  +++TVSQECPRL LKAK  PN KRG+LAG+G+A+ITVTL SKDPVDNLEFQL LPNG++VERT  RPS KPS P +IVE+ DGT+ IYWLG   TKRK GK RF  KV  DECAPE LAV+AFAYLVNAT ASCITPL   A+++VRY K++KA TCAPTPAP++NPTQPFVLFG GQRFSQGGRLAPFQ RRL+A SG+N   +++A  +  +R LQSIDTPEAC+EYCSLN G+  PF FSWN VT QC CCV  VCTP VFDPD +VYE ++P
Sbjct:   33 ILLVVFLGLAGVLTTVSQECPRLTLKAKARPNAKRGILAGKGRARITVTLSSKDPVDNLEFQLKLPNGLSVERTTMRPSSKPSVPLQIVEDSDGTSTIYWLGIAFTKRKGGKLRFRVKVKADECAPETLAVDAFAYLVNATAASCITPLVNAAIVKVRYSKLDKAATCAPTPAPSINPTQPFVLFGAGQRFSQGGRLAPFQNRRLSARSGMNTHGTLAALSQPRDRHLQSIDTPEACYEYCSLNAGEETPFFFSWNIVTRQCFCCV-AVCTPFVFDPDSNVYEALLP 318          
BLAST of NO12G03110 vs. NCBI_GenBank
Match: XP_005853337.1 (hypothetical protein NGA_0718400 [Nannochloropsis gaditana CCMP526] >EKU23024.1 hypothetical protein NGA_0718400 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 397.9 bits (1021), Expect = 7.400e-107
Identity = 194/287 (67.60%), Postives = 226/287 (78.75%), Query Frame = 0
Query:   24 MRISSSLFALVLLGVTNIVSTVSQECPRLYLKAKVHPNPKRGLLAGRGKAKITVTLHSKDPVDNLEFQLNLPNGITVERTATRPSPKPSTPPEIVENVDGTTAIYWLGYDLTKRKSGKRRFSAKVMVDECAPEALAVEAFAYLVNATEASCITPLARPAVLRVRYPKVNKAGTCAPTPAPTVNPTQPFVLFGEGQRFSQGGRLAPFQGRRLTAHSGVNMDESISASDRADNRQLQSIDTPEACFEYCSLNGGQTAPFLFSWNTVTSQCICCVEEVCTPLVFDPDFDV 311
            M+  S +F + LLG  +I++TVSQECPRL L A V PNP+RG++AG+GKAKITV L S DPVDN+EFQLNLP+G++VERTA RPS KP TPP+IVE+ DG TAI W G   TKRK GKRRF  KV  D+CAPE LAV+AFAYL+NAT+ SCITPLA PA+++VRY K NK  TCAPTPAPTVNPTQPFVL GEG RFSQG RLAPF+ RRL+ H+ +N  E I A     +RQLQSIDTPEAC+ YCSLNG +  PFLFSWNTVTSQC CC   VCTPL+ DPD +V
Sbjct:    1 MKDFSCVFLVALLGFRSILTTVSQECPRLSLMANVRPNPRRGIVAGKGKAKITVMLESNDPVDNVEFQLNLPDGLSVERTAMRPSSKPYTPPQIVEDADGVTAISWQGLAFTKRKGGKRRFRVKVKADQCAPETLAVDAFAYLMNATDTSCITPLANPAIVKVRYLKRNKDATCAPTPAPTVNPTQPFVLLGEGLRFSQGERLAPFEDRRLSLHTEINRHEGIIARYHPQDRQLQSIDTPEACYVYCSLNGSEEVPFLFSWNTVTSQCFCCA-GVCTPLIVDPDSNV 286          
BLAST of NO12G03110 vs. NCBI_GenBank
Match: EWM20247.1 (hypothetical protein Naga_100363g6, partial [Nannochloropsis gaditana])

HSP 1 Score: 394.8 bits (1013), Expect = 6.300e-106
Identity = 186/287 (64.81%), Postives = 221/287 (77.00%), Query Frame = 0
Query:   30 LFALVLLGVTNIVSTVSQECPRLYLKAKVHPNPKRGLLAGRGKAKITVTLHSKDPVDNLEFQLNLPNGITVERTATRPSPKPSTPPEIVENVDGTTAIYWLGYDLTKRKSGKRRFSAKVMVDECAPEALAVEAFAYLVNATEASCITPLARPAVLRVRYPKVNKAGTCAPTPAPTVNPTQPFVLFGEGQRFSQGGRLAPFQGRRLTAHSGVNMDESISASDRADNRQLQSIDTPEACFEYCSLNGGQTAPFLFSWNTVTSQCICCVEEVCTPLVFDPDFDVYEVMVP 317
            +  + LLG+ +I++TVSQ+CP L+LKAK  PN K G+LAG+G+A++T+TL SKDPVDNLEFQ+NLPNG++VER A RPSPKP T PEIV+N DGTT IYWL    +KRK GKRRF  KV  D+CAPE+L + AFAY VN T ASCITPLA+ A + VRY     A TCAPTP PT NP QPF++ G GQRFSQGGRLAPFQ RRL+  S ++M +  +A     NRQLQSIDTP+AC+EYCSLN GQ  PFLFSWNTVT QC CCV  VCTP +FDPD  VYEV+VP
Sbjct:    8 ILLVALLGLASILTTVSQDCPGLFLKAKARPNAKHGILAGKGQARLTITLTSKDPVDNLEFQVNLPNGLSVERIAMRPSPKPFTSPEIVKNADGTTVIYWLNIAFSKRKGGKRRFRVKVKADDCAPESLRLNAFAYTVNGTGASCITPLAKSATVNVRYSSSKNAATCAPTPVPTTNPAQPFIVLGAGQRFSQGGRLAPFQDRRLSVPSPIDMHQDKTAPSHLQNRQLQSIDTPDACYEYCSLNAGQETPFLFSWNTVTRQCFCCV-AVCTPFIFDPDSSVYEVVVP 293          
BLAST of NO12G03110 vs. NCBI_GenBank
Match: EWM20109.1 (hypothetical protein Naga_101756g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 354.0 bits (907), Expect = 1.200e-93
Identity = 174/295 (58.98%), Postives = 213/295 (72.20%), Query Frame = 0
Query:   24 MRISSSLFALVLLGVTNIVSTVSQECPRLYLKAKVHPNPKRGLLAGRGKAKITVTLHSKDPVDNLEFQLNLPNGITVERTATRPSPKPSTPPEIVENVDGTTAIYWLGYDLTKRKSGKRRFSAKVMVDECAPEALAVEAFAYLVNATEASCITPLARPAVLRVRYPKVNKAGTCAPTPAPTVNPTQPFVLFGEGQRFSQGGRLAPFQGRRLTAHSGVNMDESISASDRADNRQLQSIDTPEACFEYCSLNGGQTAPFLFSWNTVTSQCICCVEEVCTPLVFDPDFDVYEVMVPLT 319
            MR+S S   L LLG+  I++  +Q+CP + L  K  PN KRG+LAG+GKA ITV L +KDPVD+L F+++LP+G++V RT  RP+ K    PEIV+N+DG+TAI+WLG D TK K GKR F AKV+VDECAPE L +   AYL NAT   C TPLA P VLRVRY K  ++ TCAPTPAPTVNPTQPFVLFGEGQRFSQGG LAPF  RRL+ H G        +     NRQLQ+I T EAC+EYCSLN   ++PF F+WN VTS+C CC+   CTP +FDP +DVYEV++P T
Sbjct:    1 MRLSLSSLYLSLLGLALILTATAQQCPTVLLSGKTRPNSKRGVLAGKGKATITVRLRTKDPVDDLAFKMDLPSGLSVLRTVARPASKRIASPEIVQNLDGSTAIFWLGMDFTKSKGGKRVFRAKVVVDECAPEMLVITGLAYLANATATFCETPLASPEVLRVRYGKSKRSVTCAPTPAPTVNPTQPFVLFGEGQRFSQGGVLAPFSERRLSMHPG-------PSKTHVANRQLQAIGTTEACYEYCSLNANVSSPFFFNWNRVTSECFCCL-STCTPFIFDPAYDVYEVIIPAT 287          
BLAST of NO12G03110 vs. NCBI_GenBank
Match: EWM20143.1 (hypothetical protein Naga_101529g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 352.8 bits (904), Expect = 2.700e-93
Identity = 180/296 (60.81%), Postives = 209/296 (70.61%), Query Frame = 0
Query:   24 MRISSSLFALVLLGVTNIVSTVSQECPRLYLKAKVHPNPKRGLLAGRGKAKITVTLHSKDPVDNLEFQLNLPNGITVERTATRPSPKPSTPPEIVENVDGTTAIYWLGYDLTKRKSGKRRFSAKVMVDECAPEALAVEAFAYLVNATEASCITPLARPAVLRVRYPKVNKAGTCAPTPAPTVNPTQPFVLFGEGQRFSQGGRLAPFQGRRLTAHSGVNMDESISASDRADNRQLQS-IDTPEACFEYCSLNGGQTAPFLFSWNTVTSQCICCVEEVCTPLVFDPDFDVYEVMVPLT 319
            MR+SS    L LL VT +    +QECP + L AK  P+ KRG+LAGR KA ITV L SKD VD+L F+L LP G++V RTATRP+ K S  P+IV+N DG T IYWLG D T+ K GKR F AKV V++CAPE L V   AY  NAT   C TPL  P +L VRY K  K+ TCAPTPAPTVNPTQPFVLFGEGQRFSQGG LAPF  RRL+ HS  +     S + RA NRQL   I TPE CFEYCSLN   ++PFLFSWN V +QC CC+  VCTPL+FDPD+DVYE +VP+T
Sbjct:    1 MRVSSIASCLALLLVTLVPPVAAQECPTILLAAKTRPDSKRGVLAGRSKATITVKLRSKDSVDDLAFKLALPTGLSVIRTATRPASKRSVAPQIVQNADGMTNIYWLGVDFTRPKGGKRVFRAKVAVEKCAPETLVVTGLAYFANATSTFCETPLTNPEILHVRYGKFKKSATCAPTPAPTVNPTQPFVLFGEGQRFSQGGVLAPFNTRRLSMHSDSDEVRDASQTRRAVNRQLPPVIATPEDCFEYCSLNANVSSPFLFSWNRVATQCFCCL-SVCTPLIFDPDYDVYEGLVPVT 295          
BLAST of NO12G03110 vs. NCBI_GenBank
Match: EWM26026.1 (hypothetical protein Naga_100629g4 [Nannochloropsis gaditana])

HSP 1 Score: 344.0 bits (881), Expect = 1.300e-90
Identity = 171/271 (63.10%), Postives = 198/271 (73.06%), Query Frame = 0
Query:   24 MRISSSLFALVLLGVTNIVSTVSQECPRLYLKAKVHPNPKRGLLAGRGKAKITVTLHSKDPVDNLEFQLNLPNGITVERTATRPSPKPSTPPEIVENVDGTTAIYWLGYDLTKRKSGKRRFSAKVMVDECAPEALAVEAFAYLVNATEASCITPLARPAVLRVRYPKVNKAGTCAPTPAPTVNPTQPFVLFGEGQRFSQGGRLAPFQGRRLTAHSGVNMDESISASDRADNRQLQSIDTPEACFEYCSLNGGQTAPFLFSWNTVTSQCICC 295
            MR   + F + LL      + VSQECPRL LKA+V P  KRG+LAG+GK  ITV L+SKDPVD++EFQLNLPNG++VER   RPS KP TPP+IV+N DGTTAIYWLG D TK K GKRRF  KV  DECAPE L ++AFAYLVNAT ASCIT     A+L VRYPK   A TCAPTPAP+VNP QPFVLF EGQR S+ GRLAPF+ RRL+  SG   +    A   + +R LQSID+PEAC+ YCSLN G+  PF F+WNT TSQC CC
Sbjct:    1 MRSHQAYFLVALLAFAGSPTAVSQECPRLNLKAQVRPTAKRGILAGKGKGMITVKLNSKDPVDDVEFQLNLPNGLSVERAVMRPSTKPFTPPQIVQNPDGTTAIYWLGIDFTKPKGGKRRFRVKVKADECAPETLTIDAFAYLVNATAASCITS-TNSAILSVRYPKHKNAATCAPTPAPSVNPAQPFVLFREGQRCSEAGRLAPFEDRRLSLSSGHGGNG--PAQRHSGDRDLQSIDSPEACYAYCSLNAGEETPFFFNWNTATSQCFCC 268          
The following BLAST results are available for this feature:
BLAST of NO12G03110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23483.12.500e-12373.24putative lipase, partial [Nannochloropsis gaditana... [more]
XP_005852708.13.800e-11970.90hypothetical protein NGA_0705900, partial [Nannoch... [more]
EWM23769.11.400e-11066.33hypothetical protein Naga_100411g1 [Nannochloropsi... [more]
EWM20327.11.900e-11066.00hypothetical protein Naga_100406g12, partial [Nann... [more]
EWM20839.13.200e-11067.94secreted protein [Nannochloropsis gaditana][more]
XP_005853337.17.400e-10767.60hypothetical protein NGA_0718400 [Nannochloropsis ... [more]
EWM20247.16.300e-10664.81hypothetical protein Naga_100363g6, partial [Nanno... [more]
EWM20109.11.200e-9358.98hypothetical protein Naga_101756g1, partial [Nanno... [more]
EWM20143.12.700e-9360.81hypothetical protein Naga_101529g1, partial [Nanno... [more]
EWM26026.11.300e-9063.10hypothetical protein Naga_100629g4 [Nannochloropsi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL129nonsL129Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR010ngnoR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G03110.1NO12G03110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592684gene_5484Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G03110.1NO12G03110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G03110 ID=NO12G03110|Name=NO12G03110|organism=Nannochloropsis oceanica|type=gene|length=3412bp
AAGCCCTCGTCGTTAACAATTTGTTAGATCGTTCGTTTCTTATTTTTGTT
TAATCGGTAAGAGACATCGCTCTCCAAGATGTGCTCCCCCAAATAATGCA
ATGCGCCGACCTCGAGCATACCCATACATATCCCAAGCATGCGACTGTCT
TTACCAGTGAGTCCTCTAATTCTCTTGGTTGTGGCCTTGACACGGGAGTG
TGGGGTTGTGACAGAGGACCCATTCAGTGCCATGACATTTCTTGAAACCG
ACGTGAGTTACAACCTATCGTATCCCGTGTGAATTCCCATATTTTCCTCG
TTAGAACACAGTTGTGTTCACAACCATTTATATCCTGTACGTCGCTTTGT
CTGTTCTTTCTGAAAGGCATATCGCTTGCAAGTTCGAGCCGAGGTTCCAG
GTAGCAGTGCAGCCGTTGACATCTTTCTGGCTCTACTCACATTTACATTC
CTCATAACATGATCCAACAGAAGCCTCACCGTACTTTTGCAGGAGCTCAG
GAATCCTGCCACAAAGCGTCTTCGACCATGCGTATCTCGTCAAGCCTCTT
TGCTCTCGTTCTACTGGGCGTGACGAACATCGTTTCCACGGTCTCTCAAG
AATGTCCGCGGCTTTATCTCAAGGCCAAGGTACACCCGAATCCTAAGCGT
GGGCTGCTGGCTGGCAGAGGCAAGGCCAAGATCACTGTAACACTGCACAG
CAAAGACCCTGTTGACAACCTGGAGTTTCAACTGAACCTACCCAACGGGA
TAACGGTGGAGCGCACAGCCACTCGCCCGTCCCCGAAGCCCTCCACGCCG
CCTGAGATCGTCGAGAATGTTGATGGGACGACCGCCATTTACTGGCTCGG
CTATGACCTTACCAAACGCAAAAGCGGGAAACGTCGCTTTAGCGCTAAGG
TGATGGTCGACGAATGTGCCCCGGAGGCCTTGGCCGTCGAGGCCTTCGCT
TACCTTGTCAACGCGACGGAGGCCTCCTGCATCACGCCGTTGGCAAGACC
CGCTGTCCTACGCGTGCGGTACCCAAAGGTTAATAAGGCTGGGACTTGCG
CGCCCACTCCGGCCCCCACCGTCAACCCCACGCAGCCATTCGTGCTTTTC
GGGGAGGGACAACGCTTCTCGCAAGGGGGACGCCTGGCGCCCTTTCAGGG
CCGTCGTCTGACGGCACACTCTGGAGTCAACATGGATGAAAGCATCTCGG
CTTCCGATCGTGCCGACAACCGACAGCTCCAGTCCATTGATACACCTGAG
GCTTGCTTTGAGTACTGCTCACTCAACGGGGGCCAGACGGCGCCTTTCCT
GTTCAGCTGGAACACGGTAACCAGCCAGTGCATTTGTTGTGTCGAAGAGG
TGTGCACGCCCCTAGTCTTCGATCCCGATTTCGATGTCTACGAGGTCATG
GTGCCTCTGACGCTTGCTCCCACACCTACTGTGACAGCTGCACCGACCGC
CGGACCTGCTGCCACGCCCACCGCTACCCCGACAATTGCACCTACTGTCA
CGCCTACTGCTACACCGACAGCTGCACCTACTGTCACGCCTACTGCCACA
CCCACCGCTACACCGACAGCTGCGCCTACAGTCACACCCACCGCTACACC
TACTGTCACGCCTACAGTCACACCCACCGCTACACCGACAGCCGCGCCTA
CAGCCACACCCACCGCTACACCGACAGCCGCGCCTACAGTCACACCCACC
GCTACACCGACAGCCGCACCTACAGCCACACCCACCGCTACACCGACAGC
CGCGCCTACAGTCACACCCACCGCTACACCGACAGCTGCGCCAACAGCCA
CACCCACCGCTACACCGACAGCTGCGCCTACAGTCACACCCACCGCTACA
CCGACAGCCGCGCCTACAGCCACACCCACCGCTACACCGACAGCTGCGCC
TACAGCCACACCCACTGCTACCCCGACCGCTACCCCAACGGCTGCGCCTA
CTGACACGCCAGGACCAGGATCCCAGTGGACTAGTATTTTCGTAAATACG
GGCAACAATGGCGCAATCGCCTACAACAATGGAACTTTCGTGGCAGGCGG
ATCCGGCGGTAACCCCATTACATACAGCACAAACAATGGGGTCAATTGGC
AAGCTGCCACGAGCACCCCGTCAGGCATGACCGTTACAGGCATCGCATAT
GGCAATTCACTTTGGGTAGCTGTTGGGCTTTTGGAGAAACAAGTGGCAAC
CAGCTCTTCTGATCTAAACACGTGGACCGAGCAAACCGGTCTTTCTGGAA
ATAGGTTTTGGAGGGGGCTTGCTTATGGAAACGGTCTCTTCGTCGCGGTT
GCAAATAATGACGTCATGACGAGTCCAGACGGTACGACATGGACGAGTCG
AACGCCAGCCAGTAGCAATAGCTGGTGGGATGTCACATTTGGCAATAATC
TCTTCGTCGCCTCAGCTCTAAGCGGCACAGGTAATCGTGTGATGACAAGC
CCTGACGGCACTACATGGACCTCGAGGACAAGCGCCGCTGATAATGAGTG
GCGAGGCGTCACTTACGCTGACAACTTGTACGTGGCTGTCGCAAGTACGG
GCACGGGCGATCGTGTGATGACAAGCTCTGATGGTATAACGTGGACCTTG
AGGACAGGCGCCGCTAATAATGACTGGCAAAGTGTGACCTGGGGCAATGG
CACCTTCGTGGCAGTGGCCTCCACCGGAGCTGTAGGGAACCGTATTGATA
GCCGGATCATGACCAGCCCGGACGGCGTGACTTGGACAGGCCAGATTTCT
CCTGATGCTACCTGGCAGGCCGTCACTTACGGCGGGGGCTTGTTTGTAGC
AGCTGCAAACAGTGGATCGTGGAAACTCGCGTCAAGCCCCTAGTTGGAGA
CATACCCCCATGGCAAGCTTAATTGTTCTATCTGTATGGGGATGGACTTT
CTGGAGGCTCCATCGATATCTACACACACGCCATGAGGCTTATCATGCAC
ATGAATTATACTATAATAGGTGCTTCCCGATCGTACGCGAACGAAGTCAC
CAATCCATTTTCTACTACCTCATTAGTCTGCTACATACGTGGGTTGGTAT
CACACTTCATGTGATTATAAGTCAACCAAAGCGACCTCCACGAAGGAAAG
TCAGAGGCAAAGGTTACCTAGATATGTTTCATGCAGCAAAGGGACATTAC
CCTACGTTCTGAGTGAACAGCTTGACAACGTCGATCAACCATAATCCTTG
GCCTTCAACATCTCTCATTGGTACGAGTAAGAGAAACGACGAGAGCTTGC
GAAAACGAAGCGAATAGTACGATATTAACCTATTCATGACAAGGTTCTCC
ATTGATACATGCACTATCGTCATTTTACTACTTCGTGTATGGGCTGGAGT
TGGCGATGTGAGAAATAATAATTTCCTTCTAATATGCCCTTCCTCTCCTG
CCCCCCCCCCCC
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protein sequence of NO12G03110.1

>NO12G03110.1-protein ID=NO12G03110.1-protein|Name=NO12G03110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=795bp
MIQQKPHRTFAGAQESCHKASSTMRISSSLFALVLLGVTNIVSTVSQECP
RLYLKAKVHPNPKRGLLAGRGKAKITVTLHSKDPVDNLEFQLNLPNGITV
ERTATRPSPKPSTPPEIVENVDGTTAIYWLGYDLTKRKSGKRRFSAKVMV
DECAPEALAVEAFAYLVNATEASCITPLARPAVLRVRYPKVNKAGTCAPT
PAPTVNPTQPFVLFGEGQRFSQGGRLAPFQGRRLTAHSGVNMDESISASD
RADNRQLQSIDTPEACFEYCSLNGGQTAPFLFSWNTVTSQCICCVEEVCT
PLVFDPDFDVYEVMVPLTLAPTPTVTAAPTAGPAATPTATPTIAPTVTPT
ATPTAAPTVTPTATPTATPTAAPTVTPTATPTVTPTVTPTATPTAAPTAT
PTATPTAAPTVTPTATPTAAPTATPTATPTAAPTVTPTATPTAAPTATPT
ATPTAAPTVTPTATPTAAPTATPTATPTAAPTATPTATPTATPTAAPTDT
PGPGSQWTSIFVNTGNNGAIAYNNGTFVAGGSGGNPITYSTNNGVNWQAA
TSTPSGMTVTGIAYGNSLWVAVGLLEKQVATSSSDLNTWTEQTGLSGNRF
WRGLAYGNGLFVAVANNDVMTSPDGTTWTSRTPASSNSWWDVTFGNNLFV
ASALSGTGNRVMTSPDGTTWTSRTSAADNEWRGVTYADNLYVAVASTGTG
DRVMTSSDGITWTLRTGAANNDWQSVTWGNGTFVAVASTGAVGNRIDSRI
MTSPDGVTWTGQISPDATWQAVTYGGGLFVAAANSGSWKLASSP*
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Synonyms
Publications