NO12G03000, NO12G03000 (gene) Nannochloropsis oceanica

Overview
NameNO12G03000
Unique NameNO12G03000
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length9592
Alignment locationchr12:826706..836297 +

Link to JBrowse

Properties
Property NameValue
DescriptionPseudouridylate synthase 7
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:826706..836297 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0009982pseudouridine synthase activity
GO:0009982pseudouridine synthase activity
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0001522pseudouridine synthesis
GO:0009451RNA modification
GO:0009451RNA modification
GO:0001522pseudouridine synthesis
Vocabulary: INTERPRO
TermDefinition
IPR020103PsdUridine_synth_cat_dom
IPR011760PsdUridine_synth_TruD_insert
IPR001656PsdUridine_synth_TruD
Homology
BLAST of NO12G03000 vs. NCBI_GenBank
Match: EWM25740.1 (pseudouridylate synthase 7 [Nannochloropsis gaditana])

HSP 1 Score: 454.1 bits (1167), Expect = 1.100e-123
Identity = 348/1044 (33.33%), Postives = 476/1044 (45.59%), Query Frame = 0
Query:   44 QPPAT---VPKKKYSGLIKRHPQDFVVREIDLTGRVADIASLAAMPATLG-PMTAGAEAXXXXXXXXXXXXXXXXXXXXXXXXXXVPPCHDKQALISVLGQRIMETLEIFHRQHVVQVL-------EGGR-----EGQGPH---------------QIRIPLPSDRIARGVLHRSLKHAFPGIATQHDASDHSLLVVTTDARNLNVGRELL-AQKITLAQVLALFSYVGRGRGD--PITVAAARQGRGLLLSEMMVDKSARTKVYRVVSDAFPGLQCWDKYGVRVHVAWKPSSIHHQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLRKENLEHLEALQRLSCSLGGLSFPSSLAVAGVKDKRAITYQYVTVKISRKVMALERVRQGLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGIHVGHAEEW-----QRPLRLGESRGNYFNVMVRDVCCVYEDGGGEKENVDLDGPTGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTLNVMQEDLEARLCELRRAGFVNYFGVQRVGIGRSK---KGGKATASSASAAARGGTVGQPWELGRALLKQDFEAFKRLFLGVR--------------------------------------------------QEEEKKRENDDEKGVATKSMIEGNRASGSISNSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKHDPIQHAKSLFWDGQTPIHTILKLLPPSLARERLFLRGLHRHGRDQSARAVACLPYGVRTQWLSAYQSWLWNRMAKWRVERFGSKAVEGDLVLVISEKEGGXXXXXXXXXXXEPGQ---EKRPVVRRLTTDDLVGESGGGAWSERVVLPLMGYDVELPGNEEMQSECRRLMEEEGVWELFRAKQNITKKVGGANMVSNLKGAYRLLFVRPQGLSWTLSTRRGSSLSTSANSAFVAATAGGIKEKKE-RVDIELAFQLPPGSFATVLIRHFLGQEPVS 992
            QPPA+     + K++ +IKRHPQDF VREIDL G VADI + A  PA+    +  GA A                          +PPC+ ++ LIS  G  +++ LE  HR+ V++VL       + G+      G+G H               +I IPLPSDR ARG+LHRSL+  FPG++T       SLL  + D   + +   LL  Q +TL+ VL L +Y+GRG  D  P T A  R G GL       D+ AR + + +++   P LQC  +  + V V WKP+S   QEXXXXXX                             VL K N+EHLEALQR+     GLS  +SLA AGVKDKRAITYQYVT  I     AL+  R+G+                                                              G+ VG+ ++W     +RPL+ G+S GN F V+VR V        G KE  D                                                           +     +L+ RL  L   GF+N+FG QRVG+G ++   + G              T+G PWELGRALLKQDF  F RLFLGVR                                                  +E E++ + ++E+G+A  +   G R  GSI++ R                              ++   IQ AK+LFWD  TP+  +L+LLPP++ RERLF+RGL R+GR +  RA+  +PY  RTQW++AYQ+WLWNR+   RV+R+G +A+ GD+VL   E+ GG           E GQ    KR  VR +T ++L G+    A +  VV P++GY V+LP +E M +EC RL++EEG+WE+ R K  +T +     +V  LKGAYR LFV+P+GL WT  T +      + +   V A A   +   +  +D+EL F+LPPGSFATVLIR  LG+EPVS
Sbjct:   13 QPPASPFPFSRTKFNAIIKRHPQDFEVREIDLEGIVADITTPAKFPASWEFAIRKGATA--EAALGHDVTLNTSSTALAVRSSHLLPPCYGREELISRYGMELLKALESLHRRSVLEVLVPTTPYSQAGKGTESEVGEGKHTGCGEKAQEIERLEDEINIPLPSDRAARGMLHRSLRACFPGLSTCQHPHAPSLLRASKDTPKITLANALLQLQGVTLSHVLDLLAYMGRGPSDPGPETQAGVRLGGGL-------DRDARKQAHELITKHSPALQCISRNNIHVIVVWKPAS-GRQEXXXXXXSEFSCASSTSGHSPGNADMAGTHGFLARFVLCKRNVEHLEALQRVG-RAWGLSLSTSLATAGVKDKRAITYQYVTASIPGTPDALDAFRRGVSKASLLFPGNVGAPASPPPPSVSLPARSPPLQEAVDPHAGPGAGGK----------------GVGVGNLQDWGKDPSRRPLQAGQSLGNAFRVVVRHVHPRLAGVAGGKEAED---------------------------------------RSPVEESNGGSEGGEDGKPHMPETMMELDRRLQRLASEGFINFFGAQRVGMGAARGQEQEGXXXXXXXXXXXXRATLGMPWELGRALLKQDFPTFLRLFLGVREXXXXXXXXXXXXXXXXXXXREGLEGIGLSRSGIPGAGGTEGXRSEGGLVEEAEERTDREEEQGLAGGNARRGKRQEGSIADQR----------------------ITTSQGEHRRRGGIQRAKALFWDRSTPLSAVLRLLPPTMTRERLFVRGLQRYGRGEIERALCEIPYQARTQWVNAYQAWLWNRLVARRVQRYGLRAMAGDVVLEGRER-GGGGDQWEGDRAKEGGQGMVSKRQSVRFVTAEELTGDGAATALAPFVVFPVIGYGVQLPRDEAMHAECCRLLKEEGMWEMLRNKSAMTWE--SQRLVGKLKGAYRPLFVKPEGLEWTFLTPK----QDNVHVPHVHAVADNQRSSMQGSIDMELRFRLPPGSFATVLIREVLGKEPVS 961          
BLAST of NO12G03000 vs. NCBI_GenBank
Match: XP_009829630.1 (hypothetical protein H257_06188 [Aphanomyces astaci] >ETV80683.1 hypothetical protein H257_06188 [Aphanomyces astaci])

HSP 1 Score: 115.9 bits (289), Expect = 7.000e-22
Identity = 201/941 (21.36%), Postives = 306/941 (32.52%), Query Frame = 0
Query:   54 YSGLIKRHPQDFVVREIDLTGRVADIASLAAMPATLGPMTAGAEAXXXXXXXXXXXXXXXXXXXXXXXXXXVPPCHDKQALISVLGQRIMETLEIFHRQ----HVVQVLEGGREGQGPHQIRIPLPSDRIARGVLHRSLKHAFPGIATQHDASDHSLLVVTTDARNLNVGRELLAQKITLAQVLALFSYVGRGRGDPITVAAARQGRGLLLSEMMVDKSARTKVYRVVSDAFPGLQCWDKYGVRVHVAWKPSSIHHQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLRKENLEHLEALQRLSCSLGGLSFPSSLAVAGVKDKRAITYQYVTVK-ISRKVMALERVRQGLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGIHVGHAEEWQRPLRLGESRGNYFNVMVRDVCCVYEDGGGEKENVDLDGPTGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTLNVMQEDLEARLCELRRAGFVNYFGVQRVGIGRSKKGGKATASSASAAARGGTVGQPWELGRALLKQDFEAFKRLFLGVRQEEEKKRENDDEKGVATKSMIEGNRASGSISNSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKHDPIQHAKSLFWDGQTPIHTILKLLPPSLARERLFLRGLHRHGRDQSARAVACLPYGVRTQWLSAYQSWLWNRMAKWRVERFGSKAVEGDLVLVISEKEGGXXXXXXXXXXXEPGQEKRPVVRRLTTDDLVGESGGGAWSERVVLPLMGYDVELPGNEEMQSECRRLMEEEGVWELFRAKQNITKKVGGANMVSNLKGAYRLLFVRPQGLSWTLSTRRGSSLSTSANSAFVAATAGGIKEKKERVDIELAFQLPPGSFATVLIRHFLGQEP 990
            +SG+IK  P+DF VRE+ + G + D+ S       + P                                  PP    +  I V      E  E F        V+Q +      +   ++ +P P+D   +  L  +++H FPG+ + ++A D +   V+       V R+L    + +     + S++ RG  D    A A  G G         K  RT V+R VS A   L         VHV + P ++  ++                                    L+K N++H  AL  L+ +    +  S  ++AG KDKRA+TYQ+V  K +S +V  L  V+  L                                                              G+ VG     +RPL LG+SRGN F + +R                                                                             +V +++++  +  +R  G +NYFG QRVG              A+   R         +GRA+L+QD+    RL     Q ++                   N A                                              AK  F D +  I   LK LPP    ER  L GL RHG     +A+  +PY  R  +L AYQS L+N MA +RV+  G+  + GDLVL                            VR      +VG+         VVLPL+G  V+ P N ++ ++   L+ +E V     ++             + +KGAYR L  RP  L+W +                  ATA           + ++ QLPPGSFAT+++R  + Q P
Sbjct:   24 FSGVIKSTPEDFQVREVSMDGEIVDLPSDRRQEGHIAPS---------------------------------PPLSQPKPTIYVAVHEPSEGWEAFLASKLSPDVIQTI-ANIMLETVEEVDVPAPADLSDKVHLLHAIQHRFPGVQS-NNAKDAATGQVSIKLSLDPVYRKLRRGGVDVDDCSVILSFLLRGPMDAKAEAGAALGGG-------KSKDQRTLVHRAVSSASNCLVSKTSDTGGVHVYFSPKTLLRRK--------------------------RKLDTYLLFTLKKTNMDHFTALDVLARACH--ASVSDFSIAGTKDKRAVTYQHVVPKNVSHEV--LTSVQDKL-----------------------------------------------------------EVQGLQVGALRYVERPLALGQSRGNRFTIRIRQA---------------------------------------------------------------------------HVSRQEVDKAIASVRSHGCINYFGHQRVG------------DPAAVPIRS------HHIGRAMLQQDWPEALRLLFSQTQAQDL------------------NLA----------------------------------------------AKQAFLDTRN-IAQALKDLPPKCVNERTVLMGLRRHGHSDVKKAMLQIPYHRRVLYLHAYQSVLFNLMATYRVQTHGAAVMRGDLVL----------------------DSTTGAVR------VVGDHPDVEALTDVVLPLVGTKVQFPAN-DVGAKYMELLRDERVDPATWSQD------------ATVKGAYRHLICRPSDLAWDMD----------------EATAN---------VVAVSMQLPPGSFATIVLREIMKQHP 609          
BLAST of NO12G03000 vs. NCBI_GenBank
Match: XP_024575652.1 (Uncharacterized conserved protein [Plasmopara halstedii] >CEG39283.1 Uncharacterized conserved protein [Plasmopara halstedii])

HSP 1 Score: 99.0 bits (245), Expect = 8.900e-17
Identity = 80/268 (29.85%), Postives = 123/268 (45.90%), Query Frame = 0
Query:  720 DPIQHAKSLFWDGQTPIHTILKLLPPSLARERLFLRGLHRHGRDQSARAVACLPYGVRTQWLSAYQSWLWNRMAKWRVERFGSKAVEGDLVLVISEKEGGXXXXXXXXXXXEPGQEKRPVVRRLTT--DDLVGESGGGAWSERVVLPLMGYDVELPGNEEMQSECRRLMEEEGVWELFRAKQNITKKVGGANMVSNLKGAYRLLFVRPQGLSWTLSTRRGSSLSTSANSAFVAATAGGIKEKKERVDIELAFQLPPGSFATVLIRHFL 986
            D ++ AK L++     I + LKLLPP L  ER  L+GL R+G +   +A+  + +  R  ++ AYQS+++NRMA  R+ R+G K VEGDL+ V                      +   VV+ +T    D +  +   A S  V+LPL G +V  P N   ++  + L  +          +N+  K G       LKGAYR L   P+ L W+    +G++LS                       ++L+F L  GSFAT+ +R  L
Sbjct:  432 DIVRRAK-LYYLESGDIDSALKLLPPDLLVERQLLKGLKRYGDNAFEQAIQSISFARRVMYMHAYQSYVFNRMASIRLRRYGPKVVEGDLIQV--------------------SLQNNKVVKTVTAAEADTLNTTHENAIS-FVLLPLPGTNVVFPSNATTEAYNKMLEHDR--------TKNVLCKSG------LLKGAYRSLIAYPRELEWSWQEEQGNTLS-----------------------LQLSFSLNSGSFATMCLREIL 640          
BLAST of NO12G03000 vs. NCBI_GenBank
Match: XP_015243743.1 (PREDICTED: pseudouridylate synthase 7 homolog-like protein [Cyprinodon variegatus])

HSP 1 Score: 97.8 bits (242), Expect = 2.000e-16
Identity = 149/653 (22.82%), Postives = 225/653 (34.46%), Query Frame = 0
Query:  344 LRKENLEHLEALQRLSCSLGGLSFPSSLAVAGVKDKRAITYQYVTVKISRKVMALERVRQGLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGIHVGHAEEWQRPLRLGESRGNYFNVMVRDVCCVYEDGGGEKENVDLDGPTGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTLNVMQEDLEARLCEL--------RRAGFVNYFGVQRVGIGRSKKGGKATASSASAAARGGTVGQPWELGRALLKQDFEAFKRLFLGVRQEEEKKRENDDEKGVATKSMIEGNRASGSISNSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKHDPIQHAKSLFWDGQTPIHTILKLLPPSLARERLFLRGLHRHGR--DQSARAVACLPYGVRTQWLSAYQSWLWNRMAKWRVERFGSKAVEGDLVLVISEKEGGXXXXXXXXXXXEPGQEKRPVVRRLTTDDLVGESGGGAWSERVVLPLMGYDVELPGNEEMQSECRRLMEEEGVWEL-FRAKQNITKKVGGANMVSNLKGAYRLLFVRPQGLSWTLSTRRGSSLSTSANSAFVAATAGGIKEKKERVDIELAFQLPPGSFATVLIRHFL 986
            L KENLE LEA+  ++ +LG L  PS    AG+KDKRAITYQ + V    K ++ +R+++                                                                G+ +        PL+LG  RGN+F+++VR++          + +  LDG                                                         ++   D+ ARL  L        +R GFVNY+G QR G G+S                        ++G ALLK+D  +  RLF           EN++ + VA +  ++ N A  S                                                          L L+P S  RERL LR L+R+G   D   +A   LP+ +R  +  AY S +WN  A +R+   G    EGDLV    E+              EPG+   P V  +T ++   E  G    E+V+LP+ G  V+ P N  M++  +  +  +G+ E  FR           +++  NL G YR L   P  LS+ L     S  +T+  SA             E + + L F L    +AT+ +R  +
Sbjct:  293 LCKENLETLEAISYMAAALGVL--PSDFTYAGIKDKRAITYQSMVV----KKVSSQRLKE--------------------------------------------------------KAGEFEKRGMRLSQIRSVGEPLKLGRLRGNHFDLVVRNL----------RPHGALDG---------------------------------------------------------HLADADVHARLAALIKEAVENVKRRGFVNYYGPQRFGSGQSVLSD--------------------QVGLALLKEDMVSAVRLFF-------SHEENEEPQSVAKRHFLQTNNAKES----------------------------------------------------------LALMPLSKPRERLMLRALNRYGNGPDGCVQAWLSLPHSMRIFYPHAYCSRVWNEAAAYRLSTMGLGVREGDLVWTQREEN----------KAEEPGEAASPQVHVVTHEE---EQAGVYSLEQVLLPMPGNSVKYPEN-AMRTWYQERLAGDGLAECRFRV----------SSLKLNLPGCYRPLLAIPHNLSYQLQRAACSRGATNQESAM------------ESLILSLNFDLDSSCYATICLREIM 695          
BLAST of NO12G03000 vs. NCBI_GenBank
Match: XP_017349650.1 (PREDICTED: pseudouridylate synthase 7 homolog-like protein isoform X1 [Ictalurus punctatus])

HSP 1 Score: 97.8 bits (242), Expect = 2.000e-16
Identity = 199/943 (21.10%), Postives = 306/943 (32.45%), Query Frame = 0
Query:   54 YSGLIKRHPQDFVVREIDLTGRVADIASLAAMPATLGPMTAGAEAXXXXXXXXXXXXXXXXXXXXXXXXXXVPPCHDKQALISVLGQRIMETLEIFHRQHVVQVLEGGREGQGPHQIRIPLPSDRIARGVLHRSLKHAFPGIATQHDASDHSLLVVTTDARNLNVGRELLAQKITLAQVLALFSYV-GRGRGDPITVAAARQGRGLLLSEMMVDKSARTKVYRVVSDAFPGLQCWDKYGVRVHVAWKPSSIHHQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLRKENLEHLEALQRLSCSLGGLSFPSSLAVAGVKDKRAITYQYVTVKISRKVMALERVRQGLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGIHVGHAEEWQRPLRLGESRGNYFNVMVRDVCCVYEDGGGEKENVDLDGPTGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTLNVMQEDLEARLCELRRAGFVNYFGVQRVGIGRSKKGGKATASSASAAARGGTVGQPWELGRALLKQDFEAFKRLFLGVRQEEEKKRENDDEKGVATKSMIEGNRASGSISNSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKHDPIQHAKSLFWDGQTPIHTILKLLPPSLARERLFLRGLHRHGR--DQSARAVACLPYGVRTQWLSAYQSWLWNRMAKWRVERFGSKAVEGDLVLVISEKEGGXXXXXXXXXXXEPGQEKRPV--VRRLTTDDLVGESGGGAWS-ERVVLPLMGYDVELPGNEEMQSECRRLMEEEGVWEL-FRAKQNITKKVGGANMVSNLKGAYRLLFVRPQGLSWTLSTRRGSSLSTSANSAFVAATAGGIKEKKERVDIELAFQLPPGSFATVLIRHFLGQEP 990
            + G IK   QDFVV EID+ G++ +       P T        +                                +   L  +L   + +TLE F       V++G  E Q   +I +    D+  R ++H +LK+ +P + T    +DH  ++V  D       RE L+  +++ +    F +   +  G   T                  K  RT V+  VS  F  L     +  R   A    ++  +E                                    LRKENLE LEA+  ++  LG L  PS  + AG+KDKRA+TYQ + VK       LE+                                                                   G+ +        PLRLG   GN+F++++RDV         +  ++DL+                                                       +  NV   +  + +  L+  GFVNY+G QR G  +                      Q  ++G  LLK D     RLFL          E DD +  A +   +   A  S                                                          L L+PP  ARERL LR LHR+G   D    A   LP+ +R  +L AY S LWN  A +R+   G + V+GDLVL  + ++                +E+ P   V  +TT     E   G +S ++VVLP+ G  V+ P N  + S  +  + ++G+    FR            ++  N+ G YR L   P+ +S+ L     +  +             G+     R  + LAF L    +ATV +R  +  +P
Sbjct:   17 FHGSIKNSTQDFVVTEIDVHGQLVNSPGAPEEPVTFKSNEFPQKDNIRVNLLTEETPSDEVPSNAVSLDGGEVLSQECFDLSVILSSSVKKTLEQF-----ASVVQGCTEVQKNLEISLGAFPDKQQRAIVHSALKYNYPFLMT---VTDHDEILVREDPD----FRE-LSHLVSVEEAEDFFRFKDAKVPGSTFTFVPDD------------IKEHRTSVHHFVSRKFGKLMETKSFATRGRTA---ITVRLRE------------RGRQARKRTAAERADEQDLYTGFTLRKENLETLEAISYMAAMLGVL--PSDFSYAGIKDKRAVTYQSMVVKKVSPERLLEKT------------------------------------------------------------CVFERKGLQLSKIHPVSEPLRLGRLAGNHFDLVIRDV------KPHKCSSIDLES--------------------------------------------------LVEEAVENVKCVNTLSSMTILQTWGFVNYYGPQRFGSSQKV--------------------QADQVGLELLKDDMNTALRLFL-------SPEEGDDLENKAKQHFHQTGNAKES----------------------------------------------------------LALMPPHKARERLMLRALHRYGSGPDGCTHAWLSLPHSMRVFYLHAYCSRLWNEAACFRLRTLGPRPVQGDLVLAAACRD-------------SQAEEETPASQVHVVTT----AEEHDGVFSLDQVVLPMPGNSVKYPEN-ALGSWYQERLGQDGLGSCRFRI----------PSLKLNVPGCYRPLLSYPRNVSYNLHVDEDTQDT-------------GLSAPPCRTTLALAFNLNASCYATVCLREIMKCDP 675          
BLAST of NO12G03000 vs. NCBI_GenBank
Match: XP_024147574.1 (pseudouridylate synthase 7 homolog-like protein [Oryzias melastigma])

HSP 1 Score: 97.4 bits (241), Expect = 2.600e-16
Identity = 147/650 (22.62%), Postives = 221/650 (34.00%), Query Frame = 0
Query:  344 LRKENLEHLEALQRLSCSLGGLSFPSSLAVAGVKDKRAITYQYVTVKISRKVMALERVRQGLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGIHVGHAEEWQRPLRLGESRGNYFNVMVRDVCCVYEDGGGEKENVDLDGPTGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTLNVMQEDLEARLCELRRAGFVNYFGVQRVGIGRSKKGGKATASSASAAARGGTVGQPWELGRALLKQDFEAFKRLFLGVRQEEEKKRENDDEKGVATKSMIEGNRASGSISNSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKHDPIQHAKSLFWDGQTPIHTILKLLPPSLARERLFLRGLHRHGR--DQSARAVACLPYGVRTQWLSAYQSWLWNRMAKWRVERFGSKAVEGDLVLVISEKEGGXXXXXXXXXXXEPGQEKRPVVRRLTTDDLVGESGGGAWSERVVLPLMGYDVELPGNEEMQSECRRLMEEEGVWELFRAKQNITKKVGGANMVSNLKGAYRLLFVRPQGLSWTLSTRRGSSLSTSANSAFVAATAGGIKEKKERVDIELAFQLPPGSFATVLIRHFLGQEPVS 992
            LRKENLE LEA+  ++ +LG +  PS    AG+KDKRA+T+Q + V    K +  ER+++                                                                G+ V H      PL+LG  RGN+F+++VR++        G   +  L+G                                                          +++E +E     ++  GFVNY+G QR G                    G    Q  ++G ALLK+D     RLF           E+ D                                                        DP   AK LF     P    L L+PPS  RERL LR ++R+G   D  A+A   LP+G+R  +  AY S +WN     R+   G    +GDLV    EKE             + G+   P +  +TT +   E  G    E+++LP+ G  V+ P N  M +  R  +  +G+        +   +VG   +  NL G YR L   P  L + L  RR                  G++++   + + L F L P  +ATV +R  +  + +S
Sbjct:  304 LRKENLETLEAISHMASALGVV--PSDFTYAGIKDKRAVTHQSMVV----KKVTPERLKE--------------------------------------------------------KSSEFEKWGMEVSHVRSVGEPLKLGRLRGNHFDLVVRNI-----KAHGTVSHAHLEG----------------------------------------------------------LVREAVE----NVKTKGFVNYYGPQRFG--------------------GSQTVQSDQVGLALLKEDMVGAVRLFF--------TPEDGD--------------------------------------------------------DPPNQAKRLFHQTNNP-KEALALMPPSKPRERLMLRAMNRYGTGPDGCAQAWLSLPHGMRIFYPHAYCSRVWNEAVAHRLTTLGHSVKQGDLVWT-EEKE-----------IKDSGEATSPQIHVVTTQE---EQSGTYTLEQLLLPMPGNTVKYPEN-AMATWYRERLARDGL-------TDCRFRVGSLKL--NLPGCYRPLLAAPHNLQYEL--RRADD---------------GVQDR--ALALTLNFDLNPSCYATVCLREIMKADTLS 695          
BLAST of NO12G03000 vs. NCBI_GenBank
Match: XP_012198169.1 (hypothetical protein SPRG_04173 [Saprolegnia parasitica CBS 223.65] >KDO30985.1 hypothetical protein SPRG_04173 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 96.7 bits (239), Expect = 4.400e-16
Identity = 76/250 (30.40%), Postives = 106/250 (42.40%), Query Frame = 0
Query:  736 IHTILKLLPPSLARERLFLRGLHRHGRDQSARAVACLPYGVRTQWLSAYQSWLWNRMAKWRVERFGSKAVEGDLVLVISEKEGGXXXXXXXXXXXEPGQEKRPVVRRLTTDDLVGESGGGAWSERVVLPLMGYDVELPGNEEMQSECRRLMEEEGVWELFRAKQNITKKVGGANMVSNLKGAYRLLFVRPQGLSWTLSTRRGSSLSTSANSAFVAATAGGIKEKKERVDIELAFQLPPGSFATVLIRHFL 986
            ++  L+ LPPS   ER  L GL RHG D   +AV  LP+  R  +L A+QS L+N +A  RV  +G+  V GDLVL                   +P  +   VV   + DD             VVLPL G    +P    +    +++++E G+ E               +    LKGAYR +F  P+ L WT  T                          E   + ++FQLPPGSFAT+L+R  L
Sbjct:  400 VNAALRALPPSAVTERAVLMGLKRHGSDAYEKAVLNLPHHRRVMYLHAFQSLLFNLVASHRVATYGANVVAGDLVL-------------------DPATKNVRVV--ASADDAT-----CCDLNNVVLPLFGSHTTVP-THAVGDYYKQVLDEHGISE---------------DQAKQLKGAYRRVFCVPKDLHWTQDT--------------------------EDATVTVSFQLPPGSFATMLLREVL 581          
BLAST of NO12G03000 vs. NCBI_GenBank
Match: XP_017349651.1 (PREDICTED: pseudouridylate synthase 7 homolog-like protein isoform X2 [Ictalurus punctatus])

HSP 1 Score: 96.3 bits (238), Expect = 5.800e-16
Identity = 198/943 (21.00%), Postives = 307/943 (32.56%), Query Frame = 0
Query:   54 YSGLIKRHPQDFVVREIDLTGRVADIASLAAMPATLGPMTAGAEAXXXXXXXXXXXXXXXXXXXXXXXXXXVPPCHDKQALISVLGQRIMETLEIFHRQHVVQVLEGGREGQGPHQIRIPLPSDRIARGVLHRSLKHAFPGIATQHDASDHSLLVVTTDARNLNVGRELLAQKITLAQVLALFSYV-GRGRGDPITVAAARQGRGLLLSEMMVDKSARTKVYRVVSDAFPGLQCWDKYGVRVHVAWKPSSIHHQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLRKENLEHLEALQRLSCSLGGLSFPSSLAVAGVKDKRAITYQYVTVKISRKVMALERVRQGLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGIHVGHAEEWQRPLRLGESRGNYFNVMVRDVCCVYEDGGGEKENVDLDGPTGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTLNVMQEDLEARLCELRRAGFVNYFGVQRVGIGRSKKGGKATASSASAAARGGTVGQPWELGRALLKQDFEAFKRLFLGVRQEEEKKRENDDEKGVATKSMIEGNRASGSISNSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKHDPIQHAKSLFWDGQTPIHTILKLLPPSLARERLFLRGLHRHGR--DQSARAVACLPYGVRTQWLSAYQSWLWNRMAKWRVERFGSKAVEGDLVLVISEKEGGXXXXXXXXXXXEPGQEKRPV--VRRLTTDDLVGESGGGAWS-ERVVLPLMGYDVELPGNEEMQSECRRLMEEEGVWEL-FRAKQNITKKVGGANMVSNLKGAYRLLFVRPQGLSWTLSTRRGSSLSTSANSAFVAATAGGIKEKKERVDIELAFQLPPGSFATVLIRHFLGQEP 990
            + G IK   QDFVV EID+ G++ +       P T        +                                +   L  +L   + +TLE F       V++G  E Q   +I +    D+  R ++H +LK+ +P + T    +DH  ++V  D       RE L+  +++ +    F +   +  G   T                  K  RT V+  VS  F  L     +  R   A    ++  +E                                    LRKENLE LEA+  ++  LG L  PS  + AG+KDKRA+TYQ + VK       LE+                                                                   G+ +        PLRLG   GN+F++++RDV         +  ++DL+                                                          ++++E +E     ++  GFVNY+G QR G  +                      Q  ++G  LLK D     RLFL          E DD +  A +   +   A  S                                                          L L+PP  ARERL LR LHR+G   D    A   LP+ +R  +L AY S LWN  A +R+   G + V+GDLVL  + ++                +E+ P   V  +TT     E   G +S ++VVLP+ G  V+ P N  + S  +  + ++G+    FR            ++  N+ G YR L   P+ +S+ L     +  +             G+     R  + LAF L    +ATV +R  +  +P
Sbjct:   17 FHGSIKNSTQDFVVTEIDVHGQLVNSPGAPEEPVTFKSNEFPQKDNIRVNLLTEETPSDEVPSNAVSLDGGEVLSQECFDLSVILSSSVKKTLEQF-----ASVVQGCTEVQKNLEISLGAFPDKQQRAIVHSALKYNYPFLMT---VTDHDEILVREDPD----FRE-LSHLVSVEEAEDFFRFKDAKVPGSTFTFVPDD------------IKEHRTSVHHFVSRKFGKLMETKSFATRGRTA---ITVRLRE------------RGRQARKRTAAERADEQDLYTGFTLRKENLETLEAISYMAAMLGVL--PSDFSYAGIKDKRAVTYQSMVVKKVSPERLLEKT------------------------------------------------------------CVFERKGLQLSKIHPVSEPLRLGRLAGNHFDLVIRDV------KPHKCSSIDLE----------------------------------------------------------SLVEEAVE----NVKTWGFVNYYGPQRFGSSQKV--------------------QADQVGLELLKDDMNTALRLFL-------SPEEGDDLENKAKQHFHQTGNAKES----------------------------------------------------------LALMPPHKARERLMLRALHRYGSGPDGCTHAWLSLPHSMRVFYLHAYCSRLWNEAACFRLRTLGPRPVQGDLVLAAACRD-------------SQAEEETPASQVHVVTT----AEEHDGVFSLDQVVLPMPGNSVKYPEN-ALGSWYQERLGQDGLGSCRFRI----------PSLKLNVPGCYRPLLSYPRNVSYNLHVDEDTQDT-------------GLSAPPCRTTLALAFNLNASCYATVCLREIMKCDP 663          
BLAST of NO12G03000 vs. NCBI_GenBank
Match: XP_416038.1 (PREDICTED: pseudouridylate synthase 7 homolog-like protein [Gallus gallus] >XP_004937605.1 PREDICTED: pseudouridylate synthase 7 homolog-like protein [Gallus gallus] >XP_015137971.1 PREDICTED: pseudouridylate synthase 7 homolog-like protein [Gallus gallus])

HSP 1 Score: 94.7 bits (234), Expect = 1.700e-15
Identity = 137/645 (21.24%), Postives = 218/645 (33.80%), Query Frame = 0
Query:  344 LRKENLEHLEALQRLSCSLGGLSFPSSLAVAGVKDKRAITYQYVTVKISRKVMALERVRQGLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGIHVGHAEEWQRPLRLGESRGNYFNVMVRDVCCVYEDGGGEKENVDLDGPTGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTLNVMQEDLEARLCELRRAGFVNYFGVQRVGIGRSKKGGKATASSASAAARGGTVGQPWELGRALLKQDFEAFKRLFLGVRQEEEKKRENDDEKGVATKSMIEGNRASGSISNSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKHDPIQHAKSLFWDGQTPIHTILKLLPPSLARERLFLRGLHRHGRDQSA--RAVACLPYGVRTQWLSAYQSWLWNRMAKWRVERFGSKAVEGDLVLVISEKEGGXXXXXXXXXXXEPGQEKRPVVRRLTTDDLVGESGGGAWSERVVLPLMGYDVELPGNEEMQSECRRLMEEEGVWELFRAKQNITKKVGGANMVSNLKGAYRLLFVRPQGLSWTL-STRRGSSLSTSANSAFVAATAGGIKEKKERVDIELAFQLPPGSFATVLIRHFL 986
            L+KENLE LEA+  L+  LG L  PS  + +GVKDK+AITYQ + V    K +  ER+++                                                                G+ + +    Q+ LRLG+ RGN+F+++VRD+           ++   D P                                                       ++   E++EA+       GFVNY+G QR G G++                     Q  ++G ALL +      +LF           E+ D                                                        DP+ +AK  F   +    T L +LP    RE++ LR LHR+G +Q    +    +P+ VR  ++ AY S +WN    +R++ +GSK VEGDLV                    E   E   +  ++     + ES       +VVLP++G+ ++ P N+  Q    RL ++E     FR             +  N+ G YR +    Q LS+ L     GS +  +                + +V + ++F L P  +ATV +R  +
Sbjct:  274 LQKENLETLEAISFLAAELGVL--PSDFSYSGVKDKKAITYQLMVV----KKVTPERLKE--------------------------------------------------------IESKLEKKGMRIHNIHSAQQHLRLGQLRGNHFDIVVRDL-----------KHHSHDSPV-------------------------------------------------DLKERISEAMENIEAK-------GFVNYYGPQRFGQGQNV--------------------QTDQIGLALLNEKMVKAVKLFF--------TPEDTD--------------------------------------------------------DPVNNAKRYFLQTEDAKGT-LTMLPEFKVREKMLLRALHRYGVNQEGCIKGWLSIPHSVRIFYVHAYCSQIWNEATSYRLKTYGSKVVEGDLVF------------------SEENDESLSLNDKVHVVTALEESASKYSMHQVVLPMVGHSIKYPSNKVGQWYRERLSKDELQMCKFRVPP----------LQLNIPGCYRHILKNVQNLSYFLEGNEEGSKIEDN-------------HLNESKVSLHISFDLDPSCYATVCLREIM 663          
BLAST of NO12G03000 vs. NCBI_GenBank
Match: XP_008605756.1 (hypothetical protein SDRG_01977 [Saprolegnia diclina VS20] >EQC40912.1 hypothetical protein SDRG_01977 [Saprolegnia diclina VS20])

HSP 1 Score: 94.0 bits (232), Expect = 2.900e-15
Identity = 73/250 (29.20%), Postives = 104/250 (41.60%), Query Frame = 0
Query:  736 IHTILKLLPPSLARERLFLRGLHRHGRDQSARAVACLPYGVRTQWLSAYQSWLWNRMAKWRVERFGSKAVEGDLVLVISEKEGGXXXXXXXXXXXEPGQEKRPVVRRLTTDDLVGESGGGAWSERVVLPLMGYDVELPGNEEMQSECRRLMEEEGVWELFRAKQNITKKVGGANMVSNLKGAYRLLFVRPQGLSWTLSTRRGSSLSTSANSAFVAATAGGIKEKKERVDIELAFQLPPGSFATVLIRHFL 986
            ++  L+ LPPS   ER  L GL R+G D   +AV  LP+  R  +L A+QS L+N +A +RV  +G+  V GDLVL  +                        V    + DD             VVLPL G    +P    +    ++++ E G+ E               +    LKGAYR +F  P+ L WT +T                          E   + ++FQLPPGSFAT+L+R  L
Sbjct:  427 VNAALRALPPSAVTERALLMGLKRYGADAHEKAVLNLPHHRRVMYLHAFQSLLFNLLASYRVATYGANVVAGDLVLDAATNS---------------------VCIVASADDAT-----RCDLNDVVLPLFGSHTTVP-THAVGDYYKQVLSEHGISE---------------HQAQQLKGAYRRVFCVPKDLHWTQTT--------------------------ENATVTVSFQLPPGSFATMLLREAL 608          
The following BLAST results are available for this feature:
BLAST of NO12G03000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25740.11.100e-12333.33pseudouridylate synthase 7 [Nannochloropsis gadita... [more]
XP_009829630.17.000e-2221.36hypothetical protein H257_06188 [Aphanomyces astac... [more]
XP_024575652.18.900e-1729.85Uncharacterized conserved protein [Plasmopara hals... [more]
XP_015243743.12.000e-1622.82PREDICTED: pseudouridylate synthase 7 homolog-like... [more]
XP_017349650.12.000e-1621.10PREDICTED: pseudouridylate synthase 7 homolog-like... [more]
XP_024147574.12.600e-1622.62pseudouridylate synthase 7 homolog-like protein [O... [more]
XP_012198169.14.400e-1630.40hypothetical protein SPRG_04173 [Saprolegnia paras... [more]
XP_017349651.15.800e-1621.00PREDICTED: pseudouridylate synthase 7 homolog-like... [more]
XP_416038.11.700e-1521.24PREDICTED: pseudouridylate synthase 7 homolog-like... [more]
XP_008605756.12.900e-1529.20hypothetical protein SDRG_01977 [Saprolegnia dicli... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010251NSK010251Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G03000.1NO12G03000.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592644gene_5477Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100087g13gene4778Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G03000.1NO12G03000.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G03000 ID=NO12G03000|Name=NO12G03000|organism=Nannochloropsis oceanica|type=gene|length=9592bp
TAATCGCTCAAGCACTTCGATGATTCTTCGTTCCTGCCGAACAGGACCGC
CCTATAACCTCGCTGATCTCTCTGAGTTGACTCCCAAGAAGGAAAGGGGT
GGGGAATTTTAAAAAGTCCCTCAAGTCCCCTCTGTAGAACATCCTTGCCT
CACTCTGTTAATTTGTAATGTGGTTATCGTTACTTAATGCTCTGTTTCTC
TTCAAACGGATCAGTGCTCGAAAACCTTTCATATAATGATGCTGTCAAGG
ACTTCTCGCTTTTTCTCCTCACCTCTGCATACCTCCTCGTCCCCTTCTCA
CTTTTCTCACATCTCTCGCTGTACTGTGATAATTATTCGGGTTTAGACTT
TTCATCGTTTTATGCACTTTCAGTAGATGGTCGCTCATCTACGACATTCT
TTTGGGTAAAGCTGTTCGAATTGAATATACTTGCTCTCTCTTGTCCTTCC
ACTGTGTAGCTTTTTTTCACACCATGCACACCCGAGACTCATCCGCGACC
CTGTGAGTCTCATCACGCTCCCTCGTGCCTTTGGATGACCCGCCTATCGA
TCTTTTTCCTCTACCACTCCCTATCTCCCTCGTGGATTCAGTGCCTGCTA
ATTCGTTTTCTTATTCTAGGCTTCTCTCTTCTCCCTCCCATTCCTTGTGA
GTTGCTTTAATAGATACACACTTTCTTTATCGCTTTGATCCTCTTTCACT
GACTCTTCATTCCTCGAAAAAAAAATCAGCGGGATTCATCCGAAGTCGAT
GAGGTAAAAAGCAGACTCCCCGTCTTCCCTTTCCTGGTCGTTTCCTGACT
TGCTCCATATCACACCTTTTTAAAAATATGTGAAAGATTGAAAACGATAC
CTTTCCATCCTTCCCTCCATTCCTATCTATAGCCCCTGCTGCTCAAGCAT
CAGCCACAAATCCGGATCCTCCACACTTCCCATCATTACTTCCTCCGCCC
CTCCCTCCATCCCTCCTCCTATCTCATCAACTGCTATCAACCCTGCTTCC
GTCCCAGCACCCAGATCAAGAGGTGGCTGTAGCGCGCCATCAGCTTCCTC
CCAAATCGCATTGGCCCATGCCCACACGTGATCCTCATTCGCATCCATCT
TCAGTTCCGGCACTTGCTGCGGCGGCGGCGGCGGCGGCTGCGGCTGCGGT
TGCGGCTGCAGCATTTGCTCCTGATGCACCTCCTCATCTTCATGTTCTGT
GCTCCCGTCACCGCTGCTGCTATTGTCCTCGTTGCTGTTTCCGACAAAAA
TGTGAGGTGAGGGCACTCCGGGCAAGGAGACAAGCGCCGAAAACGCCGAA
GGAAGAAGACAAGCAGGGGCCAACGCCACCTGCTGCTGCTGCTGCTGTTG
TGGTTCCTGCTGAGGTTGCTCATGTGGCAGCTGCTTCTGTTCCTGTTGTA
AAAAAACCCATCGTTGCAAATGATTGTGCTCTTTTTCCTCCCCGTCCCAC
AACCCAACCTGCAACTGCTGCTGTTGCTGCTGCTGCAACTGCTGTTGCTG
TTCGGGGATGGCTGCAAAGGCGAATACTTTATCCTCCTTATCATATGAAA
CCCCACGTCCAGTCATAAAGGGGGGATTTGTAGAACAAGTGGCGAGGCGA
CGACTAATCGCTTCAGGGACAGGAGGGCCTTCTTGGCTCCAGGCCACAGT
CGAGGGAATTTTCCGACGCTTGCTTGACACAGCGATGCGTTGGGGGGGGG
GGCGAGAGGAAGGGAGGAAAGGAGAAGAGGGGATGGAGGAAGGGGGAAGA
GAGGAAGAAGAAGACAAAGTTGAGGTGGAGGTTAAGGAAGAGAAGGAGGC
GGTTGAAGGGGAGGGAGAGATGGAGGTGGTGGTGGAGGAAGGCGGTGTCT
CGTCTAGCGGGCGGGGACGGCGCCTTCGCCCTTCCTGTTGCTGCTGTTGC
ACCAGCTGTCGGTGCTTCTGCTCCTCCCCGTACTTCCTCTTGCTGGCCAA
TGCAGCCAGACGTTCCGAAGAGTAGGTGGTGCGCCGCGTACTAGACGATA
TCCCTGCTTCCCTTTCTGCTGCTCCATTCTCTGACACCGTGTGCTTTCGG
GAGGCAAAGGAGGAGGTGACGGCACGAGGAGGTGCATCTTGCTTGACAGT
TAGGGTGAGGATCAAGGTGCTCTTTCCATTCCCAAACACACGGAAACTGA
CAGTGGCCGCACATACGACAAGCAAGCCTGTCCTGGTCAGACACTCCACT
TCCACCTCCACATGCTCTGTGCCCTTTTGCAAGAAAACTGTAGATGCCGC
CCGATTCAGCGTCGCCAGTCCCTCACGCGTTGTGAAGGTGGCCCAAACAG
ATAAAGAGGTGAGTCCCGTTTCTTGTACGGTCATCGTTAGCTCGTCGGTG
GAAATGAAGAGCTGCTTCATCGCCTCACTGCAGAACATGGTCTCCGCACC
GTGTCCCCCGCGAGAAACTATGTAGCAGGCAAGCTCGTCCAGCTCAGGAT
GTTTGAAGTCGGTTGCATGAGCACGGCTATCACCTCTGCATTGCTCCTCT
TCCTGCTGCTGCAGCCGCTCCTCGTGGGTCAAGCGCATGTCAGACAAGAG
GTTGTGGATCATGTCAATAAGCCCGTGGGATGTGTCCTTGCCAGTGGCCT
TGTTAAAGAGGGAGACAATTCTCACCCAGTGTATCATCTTTTGCCGGTCC
AGCATGCCTGAAGCTGCCATCGTTTTCACGTTCTCCACAAAGGCGCGGCC
ACCGTGTGCCAAAATTTCGCTTCGGTCGATGAGGGCCTGAGTGCGGGAAG
CCACCATGGGAGCGGACTTGGCCATGGACAAGCTCTGCAGGTCCAGTGGA
GAATTTCGATACTGGGCCGTTGCACACATAGATTGTGACCGCAACAGGTC
GATAGAAGTCGAGGGGGTAAAGTTTGTGGCCCTCTATGGTCAGTGGATGA
ACAGGACACCGCGGTGGGTGTGCTTCTTTTTCGAAGATGATGCCTCCTCT
CACCCAGCTCAGTTTCCTGCTTCCTCTGAATCAGCTTAGTTTGCGGGGGC
GTTGCCGTCTGTTGGTGAGAGTATGGCCTAATTTCGTGGGTTGGTGGTTG
GACATCGTGTGAAATGGCTGGTCGCAAAGGGTGTTGTGCGCTGGAACGGC
CGTCTGTCGACCTTCCAAGGGCCGATTTAACATAAAAAGCACAACCAATC
GCTCACTTGTGAGAATCACGAGAGCCACTCAAACCATCAGTCGTGAGGTG
AGCACGGGTAAAATAAGAAGACCGTGGTGTTTTGTCGGCTCCCTCAGACT
TGCAATCAGCCCCGATAAAAATGATCGTCTTCCTGCACTAGTGTTGGCGT
AGCTTACTCGCCCTTCTTCAAAACCGAAGCGGTCTCCGAGAAGTTCGAAT
AAGCGGAAACATATGTTTTCACAAGTAGTGGTCTTGCAACTTGCGACCAC
GTTTAGTCCCACACCCTGCAATCTAACACAACGGCAACCTTCCTGGAACT
CACTTTTAAAACACCACTCGGGTGTTTCCAAATCCAATAGTCATTCAACG
TCACGTATCGACGATTCAAGGCAGCCCATCGCGTAGGCATAAAAAACTTT
AGGGTGCTTCAACGAGTGCGGGGCGACTCGTGGGGAATCCTCGGCATGGA
CCAATGCATAGTTATCTTTCACTGCAATGCATTTTCCTCTGGTTAAACTT
CCCTTTAGCTCAGCTTGCGATCACCAAGTGTCCCCCCTCACCTTTTCCTC
TCTGTCTCACTTCACAGTGGTCCAAATTTCAATTTTAGAAAGAAATTTAC
GCTTCACCCCCTTGGATGAGCGGAGGAAGGTTCCGCTTCCTCTCGATTTG
ATCTCAACTCGGTCGTTGACTCGAACACTCCACCACTGTTAATGTCACCA
TTGGCCTCTCAGAAAAATAATATCGTATTTAAAGTTATATGTTGGCACTA
ATATCTGCACGCGCGTATAGTTTAGAAGTGCTTGGGATGATAAGTGATGC
TTTTTGGGGCCCTGACCTCAGAGTTCGCCGCTGAGAGCCGAGAGAGTTTC
GTGGCCCATGATTGTACTTTCTTTCCATATGGTGATTCGCATGGGCATCA
GCTTTCTTCTCATGTGAAGCTATCCTGAAACTTGGCACCTGGCTTTTCGT
GCGTGAGGCCATGGCAGCATTTGCTCCCCTTAGTCATCTCCCCTTTACAG
CCTTTTGACCATATTCGCTTAACTGCCCACCTGACAATCACAGTTACTAA
AATCTACAACGCTACTCGGCGTCATTACATCGCCGCTGCGGTGTTGTATT
TCTACTGGGATCTATCTTGTCTCTACCTCTCCCTAACACTGCCTCTATTT
CTGGCCCTCTTGACCTCTTCTCCCTATTTACTCCTCCTATCACACACACG
TGTTGACTCACCCACCCAGCCAACGCGACAGACCCGACCCGATATCTAAA
ACGTGCTAACCTTGAAGCCCCGGCGCAATTGTCGGCGGAGATGCATTGGA
TTTTTAACTGCATCTTTCCGCTCCTTTGGCGGCGCGGCTGCCTGCTCTCT
CTCCTTCTCCTTCTCCTCAGACAGCGCCATCAGCTTGGTGCTGGGGTGGA
CATCCCTCTTGGGCAATACAGGCATGGCCTCCTCTTGCTTCATATTAGGT
GTTGCAAGACTTGTGGGGTTCTTGGACAGCGTTCTAGGATAAGAGGTGAT
GGGGAGGGACGCCGTCATGTTCGTGGCTGTCTTGGTCTCAACCACGGGCG
GCGCCACCACCTTTTCCTCCCTGGATGCAGCTGCGTCTTCCTTCTCGTTG
CGGAACTTAGGCAGAAAAGGAAGAATTGCTGTGTCTTCCGATTTTGGGGG
CCTCTATTTTGTGGGCGCTGGCTCATCATCAGTAGGGGCCTTCCAGAGTT
TTTCCGAAGAATAGGTGAGAGAGGGGTTGAAATAGGAAAACAAGGACAAG
TCGGGAGGAGCAGAGAAGGTAAGAGGAGCAAGAGGTACAGAAGGATTGAA
AGGAGGAGATACAATAAAAGCAAAAGCAGAAGAAGGCGAAGAGGGTCTAT
ACAGAGATGATCGTGTTGACAAGGACGATGAGCCAATAGGCGCCAGCAAG
AAATGGCTTGTCTTGATCGTCGTGGGGGCTGTCCCTGCCGTCGCTGCTAC
CGGAGCGGCTGACGCGTCGAAAGACAAGGCGAGAGAGGAGAGAGAGCAGA
ATGAAGGGAGGAGAGACGGGCACTGAGTTCTTGTCGTCGGCGAAGTCACG
GCAGTCATGCCGTCTGCCTTGGGCTCCTGCCCGGGCGTTTTCTTCCCTCC
CTCCTTCCTCACCTTCACGTAACCATCACCCATCCCAGTAGCTGTAGTAG
CGTTCTTCTTCAGTAGATCGTCGTTCCCACCCATCTTGGTTGCCTGGACT
GGTGCCTCGAGCGCGGTCCACTCACGTGCGGCGCTTGTGCGATACATGAT
AATCTCGTCATGAAGGGCTTAGATCTGCTCGTCCTCGTCCTCACCACTAC
TGTCCTTCAGCGCTTTACTTGCGACCTCACACATACTGTACGTTTTGACT
GCGTCATCGCGAAAAGAGCTGAATTCGCCGTTCAAAGCCTTGACCTGTGC
ATAGAGCTCAGTCTTGGTCTGCGTCTCGATGGCGTGCCCATTGGTCTTCG
ATGTCCGCTCCTTGGATAATACTGTGATTTCCTCCCGGTATACAAGACGA
GAAAACTGGCGATGAATCGGACCCTCCAACAGATGCTGGGCCTTTTTTAA
GTCCTTGGGGCAATCAGGAAGGGGCGAAGCGTTCCCAGCTGCGTCTGCCG
CCATATCCTCTGAGTCGTCATTCTCGCATATCTTCACGGCATACACAGCG
ATCAACGTGGCTAACATCACATTCATCGCATACACACAATTTCGTAACAA
CTTGCTCACACGGGCTACGTCTTTTTCGAGTGACTGAGAGCGGTCAATAC
GCCCCAGGCAAGCAGCAAGGAGGAGTACGCAGATGGGGAGCAAGAGCGAG
TTGAGCACGGAGAAGATCATAACGCAGCCACAAACAATCCACATTTCAAA
ATGCTTGAAATTTGTCGTGATGGCATCACCTGTTATTGTGCGTGGGTGTG
GAAGGGGTGGTGAGGACGCGCGTGCTTGGCCTGCTGCATGGTGGTAACGC
CTAATTTACGCAGAAGgtgcggggcagattcgggcaaatagtgatagggt
tttatagtgatagggatttatcgtgagaatgcatgcaatttgatgtccca
acgacgcgggctcaacagggtggcttactgtgtggagtcgatgccgcgaa
gggcagcgaggggaaaggccgcctatcggcatccaaaagtcactgactag
gattgtgcccacagatggcatgcgctagcggtgctgatgccaagtgacca
ttcacagttaactagtgttgcttatgtgggtttggcggggatggttgtcg
taaagcccagggcaaatggagggagggccatgttttggggggaggtgcag
ctcgaaaggttacgggcaaacgagttggcgaaacctctggagacgaggca
actgacatatccccaccacacgccacatagACAGTGTGCTCAAGCAAGGA
GCTGTCTTGTCCTTGTCTTGAACGACGCGGAAATGTGCTCTCAAAGTGAG
GCCACCAGTGGCGCGGATGCAGCACATGACCAACCTCCTGCCACGGTACC
CAAGAAAAAATACTCAGGGCTCATCAAGCGCCATCCGCAGGACTTCGTAG
TTCGTGAAATCGACTTGACAGGGCGCGTAGCGGACATCGCAAGCCTTGCC
GCTATGCCAGCGACATTGGGGCCCATGACAGCAGGAGCAGAAGCAGCCGC
CCAAGCCCCTGATGCTTCGACACCACCACCACCACCACCACCACCAGCAT
CAGCTTCGTCGTCCTTGTTGTCTGTCCCCCCATGCCACGACAAGCAGGCT
CTTATATCGGTCCTTGGCCAAAGGATCATGGAAACACTCGAAATATTTCA
TCGACAGCATGTAGTACAAGTGCTAGAAGGGGGAAGAGAAGGACAAGGAC
CTCATCAAATCCGCATCCCCCTCCCCTCCGACCGCATCGCCCGCGGCGTC
TTGCACCGTTCCCTCAAGCACGCGTTCCCAGGCATTGCCACGCAACACGA
TGCCTCGGACCATTCCCTCCTCGTTGTCACGACCGACGCGCGCAACTTGA
ATGTTGGCCGCGAGCTACTCGCGCAAAAAATCACTCTCGCACAAGTCCTT
GCCCTCTTTTCCTATGTGGGCCGGGGACGTGGAGACCCCATCACTGTAGC
CGCAGCAAGACAGGGAAGAGGATTACTTTTAAGTGAAATGATGGTCGATA
AATCGGCACGTACAAAGGTGTATCGTGTCGTGAGTGATGCTTTCCCCGGA
CTGCAATGTTGGGACAAGTACGGAGTACGTGTGCATGTGGCATGGAAGCC
TTCGTCGATCCATCACCAGGAGAAGAGAGAAAAAAGGAAAAGGAAACGTC
AAATCCAAGAGAATGAGGGAGAAGGAGGAGAAGGAGGAGGAGGAGGTGGT
AAATCGTCTTCCCTCCTCCTTCGTCTTGTCTTGCGCAAAGAAAATCTCGA
GCACCTTGAGGCCCTTCAACGATTATCCTGCTCGTTGGGGGGTTTGTCCT
TCCCTTCCTCCCTGGCTGTGGCGGGAGTGAAAGACAAGAGGGCAATCACG
TATCAATATGTCACAGTGAAGATATCAAGGAAAGTGATGGCCTTGGAACG
AGTTAGGCAAGGGCTTTTGTCCTTGAGCATTTCTCCTACTTCTACTACTC
TTACCCCTCCTCCTCTTCCTACTCCTAATCTTCCTGCTGTTACTCCTCTT
ACTCTTACTCCTACTCCTGCGACTGCTGCAGGTGGTGGTGGGAATGCTGT
TGCTTCTGCTGGTAAGGAGAGTGGGAACGGCAACAGCAGCAGCAATACAG
GAGGAATACATGTAGGCCATGCGGAAGAATGGCAACGGCCGTTGCGGCTC
GGGGAGAGTCGTGGAAACTACTTCAACGTGATGGTGAGGGATGTGTGTTG
TGTGTACGAGGACGGGGGGGGGGAGAAGGAAAACGTGGATCTTGACGGTC
CTACTGGTAAAGAGGAGAAGAAAGATATGGAGGAAAAGAAGGAGGGGAAG
GAGGAGGAAAAGGAGACGGATAAAGACGAGGATAGTACAGGTGATGTTGT
TGTCGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCGGA
AAGATGAAGCGAGTACTCTCAATGTCATGCAAGAGGACTTGGAAGCACGG
CTATGTGAGCTTAGACGTGCAGGATTCGTTAATTATTTTGGGGTGCAACG
CGTGGGGATAGGTAGATCAAAGAAAGGAGGGAAAGCAACAGCATCTTCAG
CATCAGCAGCGGCACGAGGAGGGACAGTAGGGCAGCCTTGGGAGCTCGGA
CGGGCATTATTGAAGCAGGATTTTGAGGCGTTTAAACGGCTGTTTCTCGG
TGTCCGTCAGGAGGAAGAGAAGAAGAGGGAGAACGACGACGAAAAGGGAG
TCGCGACGAAGAGTATGATTGAGGGTAACAGAGCCTCAGGCAGCATCAGT
AACAGTAGAGGTAGTTGTGGTGGTAGCAGGACTGGTGGTGATGGCAGCAG
GAGCAGCAGGAGCAGGAGCAACAGGAGCAGCAGCAGCAGTGACAACCGCA
AAAAACACGATCCGATCCAACATGCTAAATCCCTCTTTTGGGACGGACAA
ACACCCATTCACACCATCCTCAAGCTCCTCCCTCCCTCCCTTGCGCGCGA
ACGGCTGTTCCTCCGAGGCCTGCACAGGCATGGACGAGATCAATCTGCCC
GGGCTGTGGCGTGCTTACCCTATGGAGTCAGAACTCAGTGGCTTAGTGCT
TATCAATCATGGTTGTGGAATAGAATGGCAAAGTGGAGGGTGGAGAGGTT
TGGATCGAAGGCTGTAGAAGGGGATTTGGTGCTCGTAATATCGGAAAAGG
AAGGAGGGAAGGAGGGAGGGACAGAAGGAGGAATTGAGAAAGAGCCGGGG
CAAGAGAAGCGTCCAGTGGTGCGGCGTTTGACGACCGATGATTTGGTAGG
CGAGAGCGGGGGGGGAGCATGGAGTGAGAGAGTCGTCTTGCCATTGATGG
GATACGATGTCGAACTGCCCGGGAATGAGGAGATGCAGAGTGAGTGCCGA
CGACTGATGGAGGAAGAGGGTGTGTGGGAATTGTTCAGGGCGAAACAGAA
CATCACGAAGAAAGTTGGGGGTGCTAACATGGTGTCTAATTTAAAGGGTG
CGTACAGGCTTTTGTTTGTAAGGCCCCAGGGGTTGTCGTGGACGCTTTCT
ACACGCCGAGGCTCTTCTTTGTCTACTTCAGCGAATTCTGCCTTTGTGGC
AGCGACGGCTGGTGGGATCAAAGAGAAGAAGGAGAGGGTGGACATAGAGC
TTGCCTTTCAGCTGCCGCCGGGAAGCTTTGCGACTGTTTTAATTAGACAC
TTCCTGGGGCAGGAGCCCGTGTCGTGTGGTTCTTAAATCGGCTGGTGCTG
GTGGCAGGGGTAGTGGTGCCGGTGGTTTGCGGTGGAAATAAGTGTGAATA
GATTAAGATTGTAAAGAAATAACAAAAACTCAATAAAAGGAA
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protein sequence of NO12G03000.1

>NO12G03000.1-protein ID=NO12G03000.1-protein|Name=NO12G03000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=995bp
MVVTPNLRRRQCAQARSCLVLVLNDAEMCSQSEATSGADAAHDQPPATVP
KKKYSGLIKRHPQDFVVREIDLTGRVADIASLAAMPATLGPMTAGAEAAA
QAPDASTPPPPPPPPASASSSLLSVPPCHDKQALISVLGQRIMETLEIFH
RQHVVQVLEGGREGQGPHQIRIPLPSDRIARGVLHRSLKHAFPGIATQHD
ASDHSLLVVTTDARNLNVGRELLAQKITLAQVLALFSYVGRGRGDPITVA
AARQGRGLLLSEMMVDKSARTKVYRVVSDAFPGLQCWDKYGVRVHVAWKP
SSIHHQEKREKRKRKRQIQENEGEGGEGGGGGGKSSSLLLRLVLRKENLE
HLEALQRLSCSLGGLSFPSSLAVAGVKDKRAITYQYVTVKISRKVMALER
VRQGLLSLSISPTSTTLTPPPLPTPNLPAVTPLTLTPTPATAAGGGGNAV
ASAGKESGNGNSSSNTGGIHVGHAEEWQRPLRLGESRGNYFNVMVRDVCC
VYEDGGGEKENVDLDGPTGKEEKKDMEEKKEGKEEEKETDKDEDSTGDVV
VVAAAAAAAAAAAAARKDEASTLNVMQEDLEARLCELRRAGFVNYFGVQR
VGIGRSKKGGKATASSASAAARGGTVGQPWELGRALLKQDFEAFKRLFLG
VRQEEEKKRENDDEKGVATKSMIEGNRASGSISNSRGSCGGSRTGGDGSR
SSRSRSNRSSSSSDNRKKHDPIQHAKSLFWDGQTPIHTILKLLPPSLARE
RLFLRGLHRHGRDQSARAVACLPYGVRTQWLSAYQSWLWNRMAKWRVERF
GSKAVEGDLVLVISEKEGGKEGGTEGGIEKEPGQEKRPVVRRLTTDDLVG
ESGGGAWSERVVLPLMGYDVELPGNEEMQSECRRLMEEEGVWELFRAKQN
ITKKVGGANMVSNLKGAYRLLFVRPQGLSWTLSTRRGSSLSTSANSAFVA
ATAGGIKEKKERVDIELAFQLPPGSFATVLIRHFLGQEPVSCGS*
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Synonyms
Publications