NO12G02960, NO12G02960 (gene) Nannochloropsis oceanica

Overview
NameNO12G02960
Unique NameNO12G02960
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2287
Alignment locationchr12:816524..818810 +

Link to JBrowse

Properties
Property NameValue
DescriptionD-aminoacid aminotransferase-like plp-dependent enzyme-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:816524..818810 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR036038Aminotransferase-like
IPR001544Aminotrans_IV
Homology
BLAST of NO12G02960 vs. NCBI_GenBank
Match: EWM25727.1 (d-aminoacid aminotransferase-like plp-dependent enzyme-like protein [Nannochloropsis gaditana] >EWM25728.1 d-aminoacid aminotransferase-like plp-dependent enzyme-like protein [Nannochloropsis gaditana])

HSP 1 Score: 373.2 bits (957), Expect = 8.700e-100
Identity = 194/313 (61.98%), Postives = 236/313 (75.40%), Query Frame = 0
Query:   54 GMSVGITPREFLMERPPGPYTCLRARDGALLGFDFHMQRLMHAIRASGGSGSRVQEKEMRIQVLDVIAGALEDAALLRRVEESGEQKPFKTP--IDAFVTVH---AAISSSSLSSGLVLNAHAVTMPYAIMPPAITLEVRGDGRQHPEIKHSRWVRDRQELERFRSGPGGEVALSRPVGSGR----------DREVLEGLVSNIFAVKGGKLVTAQDGVLPGHMRSMTLEAARSLGVPVGEVNDCLRIEEIGEWEEAFLTGSGRVLVPIGRVEGTSVGLSGVDLPMAPGPMTNLLRARLLFDMNEGWEGMEEL 352
            G+SV  TPR+FLMERPPGPYTCLRARD +LLGFDFH QRL+H I +S G  S V   E+R +VL+VI  AL +A+     E+  E     T    D FVTVH   ++I   S +SG+ L+AHAV+MPYA+MPP +TLE+RG+GR+ P++KHS+W+RDRQ LERFR GPGGEVALSR + +GR           REVLEGLVSNIF VKGGKL+TA DG+LPGHMR+M L AA +LGVPVG+  + + +E+I EWEEAFLTGSGRVLVPIGRVEGTSVGL  VDL  APGP+TNL+RARLL+DM +GWE +  L
Sbjct:   55 GVSVRKTPRQFLMERPPGPYTCLRARDESLLGFDFHFQRLLHGIESSVGCMSPVNAGELRKRVLNVIEEALTEASQQHPSEDGKEGSTGSTEKLRDFFVTVHIDESSIVLPSSTSGVALSAHAVSMPYAVMPPPVTLEIRGEGRRSPDVKHSQWLRDRQGLERFRVGPGGEVALSRSLPAGRGEEEGKAGKAGREVLEGLVSNIFVVKGGKLLTASDGILPGHMRTMALRAAEALGVPVGDPEEKILLEDILEWEEAFLTGSGRVLVPIGRVEGTSVGLPPVDLAAAPGPITNLVRARLLYDMEDGWENLRSL 367          
BLAST of NO12G02960 vs. NCBI_GenBank
Match: ETI52000.1 (hypothetical protein F443_04765 [Phytophthora parasitica P1569])

HSP 1 Score: 110.9 bits (276), Expect = 8.100e-21
Identity = 84/263 (31.94%), Postives = 128/263 (48.67%), Query Frame = 0
Query:   64 FLMERPPGPYTCLRA---------RDGALLGFDFHMQRLMHAIRASGGSGSRVQEKEMRIQVLDVIAGALEDAALLRRVEESGEQKPFKTPIDAFVTVHAAISSSSLSSGLVLNAHAVTMPYAIMPPAITLEVRGDGRQHPEIKHSRWVRDRQELERF-------RSGPGGEVALSRPVGSGRDREVLEGLVSNIFAVKGGKLVTAQDGVLPGHMRSMTLEAARSLGVPVGEVNDCLRIEEIGEWEEAFLTGSGRVLVPIGRV 311
            FL  RP G YTC RA             L+ + FH+QRL   I     + ++ + K      LD     L+ A  L       + +  +T  D  ++V       S   G+ ++   +  P  +   A T+ V G+GR +   KH++W+ DR  +E+        R  P  EV LS+  G G DR +LEGL++N F VKGGKL TA +GVL G  R + L+A   L +PV  V +  ++ E   W+ AF+T + RV++ + R+
Sbjct:   36 FLQSRPAGVYTCARAIASVEISPELSKVLVEWSFHLQRLSTGIATVDNNFNQGRSK------LD----KLKMATQLLATTVLTQWRAIETE-DGMLSVLWYPLPDSDDYGVAVHICLMPTPKCL---ASTVLVYGEGRTNARCKHTQWIEDRVPIEKHVVQLVETRGEPIHEVLLSK-AGPGGDRLILEGLITNFFVVKGGKLYTADEGVLQGSARELVLKACHDLSIPV--VLEAPKLSERDSWQAAFVTSAVRVVIDVARM 281          
BLAST of NO12G02960 vs. NCBI_GenBank
Match: ETK91860.1 (hypothetical protein L915_04653 [Phytophthora parasitica] >ETL45258.1 hypothetical protein L916_04608 [Phytophthora parasitica] >ETP21785.1 hypothetical protein F441_04766 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 110.9 bits (276), Expect = 8.100e-21
Identity = 84/263 (31.94%), Postives = 128/263 (48.67%), Query Frame = 0
Query:   64 FLMERPPGPYTCLRA---------RDGALLGFDFHMQRLMHAIRASGGSGSRVQEKEMRIQVLDVIAGALEDAALLRRVEESGEQKPFKTPIDAFVTVHAAISSSSLSSGLVLNAHAVTMPYAIMPPAITLEVRGDGRQHPEIKHSRWVRDRQELERF-------RSGPGGEVALSRPVGSGRDREVLEGLVSNIFAVKGGKLVTAQDGVLPGHMRSMTLEAARSLGVPVGEVNDCLRIEEIGEWEEAFLTGSGRVLVPIGRV 311
            FL  RP G YTC RA             L+ + FH+QRL   I     + ++ + K      LD     L+ A  L       + +  +T  D  ++V       S   G+ ++   +  P  +   A T+ V G+GR +   KH++W+ DR  +E+        R  P  EV LS+  G G DR +LEGL++N F VKGGKL TA +GVL G  R + L+A   L +PV  V +  ++ E   W+ AF+T + RV++ + R+
Sbjct:   36 FLQSRPAGVYTCARAIASVEISPELSKVLVEWSFHLQRLSTGIATVDNNFNQGRSK------LD----KLKMATQLLATTVLTQWRAIETE-DGMLSVLWYPLPDSDDYGVAVHICLMPTPKCL---ASTVLVYGEGRTNARCKHTQWIEDRVPIEKHVVQLVETRGEPIHEVLLSK-AGPGGDRLILEGLITNFFVVKGGKLYTADEGVLQGSTRELVLKACHDLSIPV--VLEAPKLSERDSWQAAFVTSAVRVVIDVARM 281          
BLAST of NO12G02960 vs. NCBI_GenBank
Match: ETL98429.1 (hypothetical protein L917_04493 [Phytophthora parasitica] >ETP49701.1 hypothetical protein F442_04844 [Phytophthora parasitica P10297] >ETP49702.1 hypothetical protein, variant [Phytophthora parasitica P10297] >KUF64469.1 hypothetical protein AM587_10017234 [Phytophthora nicotianae])

HSP 1 Score: 110.9 bits (276), Expect = 8.100e-21
Identity = 84/263 (31.94%), Postives = 128/263 (48.67%), Query Frame = 0
Query:   64 FLMERPPGPYTCLRA---------RDGALLGFDFHMQRLMHAIRASGGSGSRVQEKEMRIQVLDVIAGALEDAALLRRVEESGEQKPFKTPIDAFVTVHAAISSSSLSSGLVLNAHAVTMPYAIMPPAITLEVRGDGRQHPEIKHSRWVRDRQELERF-------RSGPGGEVALSRPVGSGRDREVLEGLVSNIFAVKGGKLVTAQDGVLPGHMRSMTLEAARSLGVPVGEVNDCLRIEEIGEWEEAFLTGSGRVLVPIGRV 311
            FL  RP G YTC RA             L+ + FH+QRL   I     + ++ + K      LD     L+ A  L       + +  +T  D  ++V       S   G+ ++   +  P  +   A T+ V G+GR +   KH++W+ DR  +E+        R  P  EV LS+  G G DR +LEGL++N F VKGGKL TA +GVL G  R + L+A   L +PV  V +  ++ E   W+ AF+T + RV++ + R+
Sbjct:   36 FLQSRPAGVYTCARAIASVEISPELSKVLVEWSFHLQRLSTGIATVDNNFNQGRSK------LD----KLKMATQLLATTVLTQWRAIETE-DGMLSVLWYPLPDSDDYGVAVHICLMPTPKCL---ASTVLVYGEGRTNARCKHTQWIEDRVPIEKHVVQLVETRGEPIHEVLLSK-AGPGGDRLILEGLITNFFVVKGGKLYTADEGVLQGSTRELVLKACHDLSIPV--VLEAPKLSERDSWQAAFVTSAVRVVIDVARM 281          
BLAST of NO12G02960 vs. NCBI_GenBank
Match: ETO80744.1 (hypothetical protein F444_04818 [Phytophthora parasitica P1976] >ETO80745.1 hypothetical protein, variant [Phytophthora parasitica P1976])

HSP 1 Score: 110.9 bits (276), Expect = 8.100e-21
Identity = 84/263 (31.94%), Postives = 128/263 (48.67%), Query Frame = 0
Query:   64 FLMERPPGPYTCLRA---------RDGALLGFDFHMQRLMHAIRASGGSGSRVQEKEMRIQVLDVIAGALEDAALLRRVEESGEQKPFKTPIDAFVTVHAAISSSSLSSGLVLNAHAVTMPYAIMPPAITLEVRGDGRQHPEIKHSRWVRDRQELERF-------RSGPGGEVALSRPVGSGRDREVLEGLVSNIFAVKGGKLVTAQDGVLPGHMRSMTLEAARSLGVPVGEVNDCLRIEEIGEWEEAFLTGSGRVLVPIGRV 311
            FL  RP G YTC RA             L+ + FH+QRL   I     + ++ + K      LD     L+ A  L       + +  +T  D  ++V       S   G+ ++   +  P  +   A T+ V G+GR +   KH++W+ DR  +E+        R  P  EV LS+  G G DR +LEGL++N F VKGGKL TA +GVL G  R + L+A   L +PV  V +  ++ E   W+ AF+T + RV++ + R+
Sbjct:   36 FLQSRPAGVYTCARAIASVEISSELSKVLVEWSFHLQRLSTGIATVDNNFNQGRSK------LD----KLKMATQLLATTVLTQWRAIETE-DGMLSVLWYPLPDSDDYGVAVHICLMPTPKCL---ASTVLVYGEGRTNARCKHTQWIEDRVPIEKHVVQLVETRGEPIHEVLLSK-AGPGGDRLILEGLITNFFVVKGGKLYTADEGVLQGSTRELVLKACHDLSIPV--VLEAPKLSERDSWQAAFVTSAVRVVIDVARM 281          
BLAST of NO12G02960 vs. NCBI_GenBank
Match: OWZ04225.1 (Thioredoxinlike protein [Phytophthora megakarya])

HSP 1 Score: 110.5 bits (275), Expect = 1.100e-20
Identity = 85/264 (32.20%), Postives = 124/264 (46.97%), Query Frame = 0
Query:   62 REFLMERPPGPYTCLRARDGALLGFD---------FHMQRLMHAIRASGGSGSRVQEKEMRIQVLDVIAGALEDAALL--RRVEESGEQKPFKTPIDAFVTVHAAISSSSLSSGLVLNAHAVTMPYAIMPPAITLEVRGDGRQHPEIKHSRWVRDRQELERF-------RSGPGGEVALSRPVGSGRDREVLEGLVSNIFAVKGGKLVTAQDGVLPGHMRSMTLEAARSLGVPVGEVNDCLRIEEIGEWEEAFLTGSGRVLVPI 308
            + FL  RP G YTC RA+    L  D         FH+QRL   +       S     ++ +  L +    L    L   R +E           +D  ++V    S  S    + ++   +  P  +   A T+ V G+GR +   KHS+W+ DR  LE+        R  P  EV LSR  G G DR +LEGL++N F VK GKL TA +GVL G  R + L+A   L +PV  V +  ++ E+  W+ AF+T + RV+V +
Sbjct:   34 KSFLQSRPAGVYTCARAKASVALDSDLSTLLVEWSFHLQRLSAGLTT---MDSNFNTDKLMVDKLKMATRRLAIMVLTQWRAIE----------TVDGMLSVLWCPSPDSDEYSVAVHVCPMLTPTCL---ASTVLVYGEGRTNARCKHSQWIEDRIPLEKHMIQVEETRGEPIHEVLLSR-AGPGGDRLLLEGLITNFFIVKEGKLYTADEGVLQGSTRELVLKACYDLLIPV--VLEAPKLSELDSWQAAFVTSAVRVVVDV 278          
BLAST of NO12G02960 vs. NCBI_GenBank
Match: ETM51590.1 (hypothetical protein L914_04601 [Phytophthora parasitica])

HSP 1 Score: 109.4 bits (272), Expect = 2.300e-20
Identity = 83/263 (31.56%), Postives = 127/263 (48.29%), Query Frame = 0
Query:   64 FLMERPPGPYTCLRA---------RDGALLGFDFHMQRLMHAIRASGGSGSRVQEKEMRIQVLDVIAGALEDAALLRRVEESGEQKPFKTPIDAFVTVHAAISSSSLSSGLVLNAHAVTMPYAIMPPAITLEVRGDGRQHPEIKHSRWVRDRQELERF-------RSGPGGEVALSRPVGSGRDREVLEGLVSNIFAVKGGKLVTAQDGVLPGHMRSMTLEAARSLGVPVGEVNDCLRIEEIGEWEEAFLTGSGRVLVPIGRV 311
            FL  RP G YTC RA             L+ + FH+QRL   I     + ++ + K      LD     L+ A  L       + +  +T  D  ++V       S   G+ ++   +  P  +   A T+ V G+GR +   KH++W+ DR  +E+        R  P  E  LS+  G G DR +LEGL++N F VKGGKL TA +GVL G  R + L+A   L +PV  V +  ++ E   W+ AF+T + RV++ + R+
Sbjct:   36 FLQSRPAGVYTCARAIASVEISPELSKVLVEWSFHLQRLSTGIATVDNNFNQGRSK------LD----KLKMATQLLATTVLTQWRAIETE-DGMLSVLWYPLPDSDDYGVAVHICLMPTPKCL---ASTVLVYGEGRTNARCKHTQWIEDRVPIEKHVVQLVETRGEPIHEALLSK-AGPGGDRLILEGLITNFFVVKGGKLYTADEGVLQGSARELVLKACHDLSIPV--VLEAPKLSERDSWQAAFVTSAVRVVIDVARM 281          
BLAST of NO12G02960 vs. NCBI_GenBank
Match: OQR99382.1 (hypothetical protein ACHHYP_06953 [Achlya hypogyna])

HSP 1 Score: 108.2 bits (269), Expect = 5.200e-20
Identity = 91/286 (31.82%), Postives = 135/286 (47.20%), Query Frame = 0
Query:   59 ITPREFLME---RPPGPYTCLRARDGALLGFDFHMQRLMHAIRASGGSGSRVQEKEMRIQVLDVIAGALEDAALLRRVEESGEQKPFKTPIDAFVTVHAAISSSSLSSGLVLNAHAVT-MPYAIMP---PAITLEVRGDGRQHPEIKHSRWVRDRQELERFRSGPG--------GEVALSRPVGSGRDREVLEGLVSNIFAVKGGKLVTAQDGVLPGHMRSMTLEAARSLGVPVGEVNDCLRIEEIGEWEEAFLTGSGRVLVPIG---RVEGTSVGLSGVDLPMAP 327
            +TP+EFLM       G YTCLR R G +  + FH  RL                          +  A ED+  L    E+  +  F   +D    +   ++++      V N  A+  +  A +P   P  TL V G GR++P +KH  W+ +R+ LE   +           GEV LS  V  G  R +LEGL++N F +KGGK+ TA D VLPG  R++ +EA  SLG+P+  + +   +EE   WE AF T   R++VP+    R + T+   +   +P AP
Sbjct:    1 MTPKEFLMSLAYESGGEYTCLRLRRGRICMWPFHRSRL-------------------------TVDPAAEDS--LPATIEAAARARFGAAVDTGDFMVTVVNANGEHHVHVCNMPALAFVSDAAVPTVRPIATL-VLGSGRRNPTVKHVDWIYERKALEVTAAAKAAELGLDAFGEVLLSHTV-QGTTR-LLEGLITNFFVLKGGKVYTAGDAVLPGSTRALVMEACNSLGIPL--LLEAPVLEESASWEAAFTTSVVRLIVPVATLYRQDQTTGAWATHTVPTAP 254          
BLAST of NO12G02960 vs. NCBI_GenBank
Match: XP_008902131.1 (hypothetical protein PPTG_09036 [Phytophthora parasitica INRA-310] >ETN12116.1 hypothetical protein PPTG_09036 [Phytophthora parasitica INRA-310])

HSP 1 Score: 104.0 bits (258), Expect = 9.800e-19
Identity = 81/253 (32.02%), Postives = 121/253 (47.83%), Query Frame = 0
Query:   64 FLMERPPGPYTCLRA---------RDGALLGFDFHMQRLMHAIRASGGSGSRVQEKEMRIQVLDVIAGALEDAALLRRVEESGEQKPFKTPIDAFVTVHAAISSSSLSSGLVLNAHAVTMPYAIMPPAITLEVRGDGRQHPEIKHSRWVRDRQELERF-------RSGPGGEVALSRPVGSGRDREVLEGLVSNIFAVKGGKLVTAQDGVLPGHMRSMTLEAARSLGVPVGEVNDCLRIEEIGEWEEAFLTGS 301
            FL  RP G YTC RA             L+ + FH+QRL   I     + ++ + K      LD     L+ A  L       + +  +T  D  ++V       S   G+ ++   +  P  +   A T+ V G+GR +   KH++W+ DR  +E+        R  P  EV LS+  G G DR +LEGL++N F VKGGKL TA +GVL G  R + L+A   L +PV  V +  ++ E   W+ AF+T +
Sbjct:   36 FLQSRPAGVYTCARAIASVEISPELSKVLVEWSFHLQRLSTGIATVDNNFNQGRSK------LD----KLKMATQLLATTVLTQWRAIETE-DGMLSVLWYPLPDSDDYGVAVHICLMPTPKCL---ASTVLVYGEGRTNARCKHTQWIEDRVPIEKHVVQLVETRGEPIHEVLLSK-AGPGGDRLILEGLITNFFVVKGGKLYTADEGVLQGSTRELVLKACHDLSIPV--VLEAPKLSERDSWQAAFVTST 271          
BLAST of NO12G02960 vs. NCBI_GenBank
Match: CBN75813.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 103.2 bits (256), Expect = 1.700e-18
Identity = 93/283 (32.86%), Postives = 134/283 (47.35%), Query Frame = 0
Query:   60 TPREFLMERPPGPYTCLRARD-GALLGFDFHMQRLMHAIRASG-GSGSRVQEKE-MRIQVLDVIAGALED--------------AALL----RRV--EESGE-----QKPFKTPIDAFVTVHAA------ISSSSLSSGLVLNAHA---VTMPYAIMPPAITLEVRGDGRQHPEIKHSRWVRDRQELERFRSGPGG-EVALSR----PVGSGRDREVLEGLVSNIFAV-KGGKLVTAQDGVLPGHMRSMTLEAARSLGVPVGEVNDCLRIEEIGEWEEAFLTG 300
            +P+EFL+  PPGPYTCLR  D  ++    FH+ RL  + +A+G G  +R Q ++ +  + ++ IA   E                 +L    RR+  E++GE      +P  T   AF     +       +  +    + + AHA    T P    P  + + + G GR  P+ KHS W+RDR+ LE  ++  G  EV LS     P G+ R R +LEGL SN F V + G + TA  GVL G MR + +      G+ V    D   I   G W EAFLTG
Sbjct:   98 SPQEFLLANPPGPYTCLRTVDHRSVAMLPFHLDRLWQSSQATGFGPAARAQGRQSLEQETVETIARVTESFREENAGGGCPECMTTVLYTHRRRLGKEDAGEGLSDDDQPGGT--TAFTGTRTSKRPRKGAARPTKDREICIMAHAWPLPTPPVDGRPAGVKVLIAGSGRSLPKAKHSSWLRDRKRLEELKAQTGAQEVVLSEIGFSPEGTTR-RLLLEGLTSNFFVVEEDGAVSTAPSGVLLGGMRQLLISVCDKEGIEVR--FDAPDISRAGRWREAFLTG 375          
The following BLAST results are available for this feature:
BLAST of NO12G02960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25727.18.700e-10061.98d-aminoacid aminotransferase-like plp-dependent en... [more]
ETI52000.18.100e-2131.94hypothetical protein F443_04765 [Phytophthora para... [more]
ETK91860.18.100e-2131.94hypothetical protein L915_04653 [Phytophthora para... [more]
ETL98429.18.100e-2131.94hypothetical protein L917_04493 [Phytophthora para... [more]
ETO80744.18.100e-2131.94hypothetical protein F444_04818 [Phytophthora para... [more]
OWZ04225.11.100e-2032.20Thioredoxinlike protein [Phytophthora megakarya][more]
ETM51590.12.300e-2031.56hypothetical protein L914_04601 [Phytophthora para... [more]
OQR99382.15.200e-2031.82hypothetical protein ACHHYP_06953 [Achlya hypogyna... [more]
XP_008902131.19.800e-1932.02hypothetical protein PPTG_09036 [Phytophthora para... [more]
CBN75813.11.700e-1832.86conserved unknown protein [Ectocarpus siliculosus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010242NSK010242Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02960.1NO12G02960.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592622gene_5470Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100087g20gene4773Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02960.1NO12G02960.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02960 ID=NO12G02960|Name=NO12G02960|organism=Nannochloropsis oceanica|type=gene|length=2287bp
CATCATGACCACGCACCCCCCTTACCCCACTTACCCCACGCCCACAACGT
TAGAACCATAGTTTATTTCCCATTGCACGGCCACCACCTCCACCTCACAC
ACCTTTCAAATTGCCAGTCCAGAACGACCACACAACTTTCGGTGACTGCG
AGAAACCGAATTGGAACACTCATCCCAAGCGCCAGCGGCAACTTCAGAGC
GATGCTGCTTCAACAAGTCAAGACCAACTTTCTACGGCCATCAGCAGACC
TCGCCCTCCTCCTCCTCGTTATCCTTGTTCTCTTGCCTATCACCACCACA
GCGTTCTCTGGTAGCACCTTGACAAGCCTGTCGCCGCAAAACCCGCCTCC
GCCCAAGGGGGGGATGAGCGTTGGGATCACCCCACGGGAGTTTTTGATGG
AACGCCCTCCGGGTCCTTACACTTGCCTTCGAGCCCGCGACGGTGCATTG
TTAGGTTTTGACTTTCACATGCAGCGCTTGATGCACGCGATTCGAGCCTC
GGGGGGCAGTGGAAGCAGGGTGCAAGAGAAGGAAATGCGCATCCAAGTGC
TTGACGTGATTGCCGGGGCCCTGGAAGACGCAGCCCTCCTTCGGAGAGTA
GAGGAATCTGGCGAACAGAAGCCCTTTAAAACCCCCATCGACGCCTTTGT
TACTGTCCACGCCGCGATCTCCTCCTCCTCTTTATCGTCGGGCCTGGTCT
TAAACGCCCACGCCGTGACCATGCCCTATGCAATCATGCCTCCAGCCATA
ACCTTGGAAGTCCGAGGCGATGGGCGGCAACACCCAGAAATCAAACACTC
CAGATGGGTACGTGACAGACAAGAACTCGAGCGGTTTCGCTCGGGTCCTG
GGGGGGAGGTAGCTTTGTCTCGCCCTGTAGGATCTGGGAGGGATAGAGAG
GTCTTGGAGGGGTTGGTGAGCAATATTTTTGCAGTCAAGGGAGGGAAGCT
CGTGACGGCCCAAGATGGTGTGTTGCCGGGGCATATGCGATCAATGACAC
TAGAAGCCGCGCGATCTTTAGGTGTGCCGGTGGGGGAAGTGAATGACTGT
TTGAGAATTGAGGAAATCGGGGAGTGGGAGGAGGCATTTTTGACAGGCTC
GGGACGGGTGCTAGTTCCGATTGGAAGGGTGGAGGGAACGAGTGTGGGGT
TGTCGGGAGTAGATCTGCCGATGGCACCAGGGCCGATGACCAACTTATTG
AGAGCACGGTTGCTATTTGACATGAATGAGGGATGGGAAGGCATGGAGGA
GCTACGGAGGATGTGAGGGAGGAACAACAGCAGCCTGGAGGGAAGAAAAG
TAGTGAGCGgtaagtttttggtcgtcggtgaaagagcgggaaggatagtt
ctgtgtattttaatttgtacaccgtatctcaaatctctcctggcatgtgt
gtctgtccgtttaccattgtgtgcgcactctttcctttgtctcctgtctc
ttcccctccctccccgcctcccctcctccctcaatcgccgccttatgaca
attaaaaggagttccttcatcctacggacattcacttttacgaaaaggtc
ggcagattcattttttataacaacactctttccatccctcttgcctttga
acaatcatggcatcaccggacttccaagggagtgcacatctctttccgtt
gattggacgatttcttcttgtacatatacatacacctgccgctgtgtgta
tgtgtgtgtgcttctgtgtcgctgagattgtatgtctgcatttctcaccg
cccctctccctagctctaaatgtatgtcgctgcttctgtcggtgtgagta
aggaagttggtaattaattgtgtcatgccaggtccgtcttcgtagtccct
ctccatctctcattctcacgagtcgtacgttttatcagtccctcctgtat
attctttctatcgttagaaaacctcaaggtttatcctcttctcacatttt
caatcactgatcctctttccttcttcccctccgcgcttggtttcctcccg
ccttcggcacaagATACAGAAATTAGATGATATACAAATCGGATGTTTCG
CAGAATTACCCATTACCAGCTGCGAGACAGTTTGGGTGACAAATTCAAAA
ATGCAGATGACTGAGAATTGAATGTAGATGACATGTGTGTGGTAGTAGGA
GAGGGAATATAAGGTAAGAGTCGAGAGGTAGAAATTTTGACAGGGGGTAA
TATGATTGATTGGTATGTAGGAGAAGAAGGCGAAGCGATGCAAAGGCACA
CATAGATATGCAAACAAGATGACTTTTTGCAAGCCTT
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protein sequence of NO12G02960.1

>NO12G02960.1-protein ID=NO12G02960.1-protein|Name=NO12G02960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=355bp
MLLQQVKTNFLRPSADLALLLLVILVLLPITTTAFSGSTLTSLSPQNPPP
PKGGMSVGITPREFLMERPPGPYTCLRARDGALLGFDFHMQRLMHAIRAS
GGSGSRVQEKEMRIQVLDVIAGALEDAALLRRVEESGEQKPFKTPIDAFV
TVHAAISSSSLSSGLVLNAHAVTMPYAIMPPAITLEVRGDGRQHPEIKHS
RWVRDRQELERFRSGPGGEVALSRPVGSGRDREVLEGLVSNIFAVKGGKL
VTAQDGVLPGHMRSMTLEAARSLGVPVGEVNDCLRIEEIGEWEEAFLTGS
GRVLVPIGRVEGTSVGLSGVDLPMAPGPMTNLLRARLLFDMNEGWEGMEE
LRRM*
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Synonyms
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