NO12G02920, NO12G02920 (gene) Nannochloropsis oceanica

Overview
NameNO12G02920
Unique NameNO12G02920
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3083
Alignment locationchr12:806729..809811 +

Link to JBrowse

Properties
Property NameValue
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:806729..809811 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0016301kinase activity
GO:0016301kinase activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR027417P-loop_NTPase
IPR010488Zeta_toxin_domain
IPR013766Thioredoxin_domain
Homology
BLAST of NO12G02920 vs. NCBI_GenBank
Match: EWM25742.1 (uncharacterized protein Naga_100087g24 [Nannochloropsis gaditana])

HSP 1 Score: 309.3 bits (791), Expect = 4.000e-80
Identity = 157/223 (70.40%), Postives = 176/223 (78.92%), Query Frame = 0
Query:  622 MVSQTEFWRKHGQHVVSVEADHFKAIDPVYQLLTRAKLPKASEQVHNYSTQAAEELFLSALKFRRDIIFDSTLAWAPFLMQTLDMVRDNRHTYKRGPGYVETPSPPPSTG------SNNGSISGENGKEGGSSSMVVEERYWAIETTLPRDQQVTPYRVELVGVFVRPEVAVRRAIIRRLLTGRGVPVRDQLRSHALFAKNFEKFSMTFDTVTLYDNNRRHDR 839
            MVSQ+EFWR+HGQ+VVSVEADHFK IDPVYQLLTR   PKASE VH YSTQAAEELFLSALKF+RDIIFDSTLAWAPFL QTL MVRD +H YKRGPGYV   +P  S G             G++G E      VV E+YW +E+ +  +Q  T YRVELVGV+VRPEVAVRRAIIRRLLTGRGVPVR+QLRSHALFAKNFE F++ FDTV LYDNNRRH++
Sbjct:    1 MVSQSEFWRRHGQNVVSVEADHFKEIDPVYQLLTRLNQPKASEAVHTYSTQAAEELFLSALKFKRDIIFDSTLAWAPFLSQTLAMVRDTKHQYKRGPGYVRIRTPSVSDGGAGEGPGGTRRGEGQDGAEASPDGTVVAEKYWEVESEVSEEQMATSYRVELVGVYVRPEVAVRRAIIRRLLTGRGVPVREQLRSHALFAKNFETFALQFDTVLLYDNNRRHEQ 223          
BLAST of NO12G02920 vs. NCBI_GenBank
Match: PRP88167.1 (hypothetical protein PROFUN_03990 [Planoprotostelium fungivorum])

HSP 1 Score: 193.4 bits (490), Expect = 3.200e-45
Identity = 121/351 (34.47%), Postives = 178/351 (50.71%), Query Frame = 0
Query:  555 LSCRRDLASRRKWVSAMEIFRALGCHDEASCRALTRAQGRGRDERVEPPHLILLGGGMGAGKTTLKKMVSQTEFWRKHGQHVVSVEADHFKAIDPVYQLLTRAKLPKASEQVHNYSTQAAEELFLSALKFRRDIIFDSTLAWAPFLMQTLDMVRDNRHTYKRGPGYVETPSPPPSTGSNNGSISGENGKEGGSSSMVVEERYWAIETTLPRDQQVTPYRVELVGVFVRPEVAVRRAIIRRLLTGRGVPVRDQLRSHALFAKNFEKFSMTFDTVTLYDNNRRHDRVPXXXXXXXXXXXXXXEEERLVGSRVIARKDVEDTELKILDVEAFRAFQAVARINTDATSVDELYEE 906
            L  R  LA RR+ ++ ++   A+ C+   +C+     +      R EPP L  +GGGM AGK+T  + +  + FW K+      VEAD  K  DP + L      P+A   +H +S +AAEEL L A++  RDI+FD T++W PF+ QT+ M++D+RH +K GPGYV                 G  G+E      VVEERYW  E      ++  PY + L GV V  ++AV+R IIR + TGR VPVR QL+SH LF+ NF +++   D V LY N                      + ++   S  +  K  E  ELK+++   +R F     IN DA +  +L+ +
Sbjct:  318 LRTRSLLARRRETLTILQKLNAMKCYGN-TCKTFQHPKA-----RKEPPRLYFVGGGMAAGKSTCIEAIRDSNFWSKY-----VVEADAIKRNDPAFSLAKSTDDPEALSAIHEHSVKAAEELLLEAIRHSRDIVFDGTMSWLPFVEQTVKMLKDSRHNWKLGPGYV---------------TKGREGRE-----KVVEERYWEEEGEAEETRR--PYHIVLFGVTVEADIAVQRGIIRGIETGRTVPVRSQLQSHKLFSSNFPRYTELCDEVYLYHN----------------------QTDQYTHSPTLIVKKEEGRELKVIEEGLYRDFLRKRDINVDAKNHADLFPD 613          
BLAST of NO12G02920 vs. NCBI_GenBank
Match: XP_005716323.1 (unnamed protein product [Chondrus crispus] >CDF36504.1 unnamed protein product [Chondrus crispus])

HSP 1 Score: 187.6 bits (475), Expect = 1.800e-43
Identity = 104/236 (44.07%), Postives = 136/236 (57.63%), Query Frame = 0
Query:  602 PPHLILLGGGMGAGKTTLKKMVSQTEFWRKHGQHVVSVEADHFKAIDPVYQLLTRAKLPKASEQVHNYSTQAAEELFLSALKFRRDIIFDSTLAWAPFLMQTLDMVRDNRHTYKRGPGYVETPSPPPSTGSNNGSISGENGKEGGSSSMVVEERYWAIETTLPRDQQVTPYRVELVGVFVRPEVAVRRAIIRRLLTGRGVPVRDQLRSHALFAKNFEKFSMTFDTVTLYDNNRRHD 838
            PP  +LLGGGMGAGKTT   ++  T FW++HG  VV VEAD FK  DP++ +L R+  PKA+  VH+ S  AAEELFL A+  RRD++FD T++W  +  QT+ M+ D  + YKRGPGY +                  +GK        + E YW    +  R +    YRVELVGV    E +V R I+RR+  GRGV V DQL SHALF+KNFE +    D + L+D     D
Sbjct:  392 PPVCVLLGGGMGAGKTTALGLIRNTPFWKEHGDDVVVVEADAFKMSDPLFHVL-RSITPKAARIVHHDSVTAAEELFLQAVNSRRDVVFDGTMSWGEYAQQTVKMLTDTDYLYKRGPGYRKE----------------SDGK--------ITEVYWV--RSAKRMKPAPAYRVELVGVTADAETSVMRGIVRRITDGRGVAVPDQLHSHALFSKNFESYIEIMDAIYLFDTTMSSD 600          
BLAST of NO12G02920 vs. NCBI_GenBank
Match: XP_005648203.1 (hypothetical protein COCSUDRAFT_66031 [Coccomyxa subellipsoidea C-169] >EIE23659.1 hypothetical protein COCSUDRAFT_66031 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 182.2 bits (461), Expect = 7.400e-42
Identity = 118/354 (33.33%), Postives = 178/354 (50.28%), Query Frame = 0
Query:  561 LASRRKWVSAMEIFRALGCHDEASCRALTRAQGRGRDERVE-PPHLILLGGGMGAGKTTLKKMVSQTEFWRKHGQHVVSVEADHFKAIDPVYQLLTRAKL----PKASEQVHNYSTQAAEELFLSALKFRRDIIFDSTLAWAPFLMQTLDMVRDNRHTYKRGPGYVETPSPPPSTGSNNGSISGENGKEGGSSSMVVEERYWAIETTLPRDQQVTPYRVELVGVFVRPEVAVRRAIIRRLLTGRGVPVRDQLRSHALFAKNFEKFSMTFDTVTLYDNNRRHDRVPXXXXXXXXXXXXXXEEERLVGSRVIARKDVEDTELKILDVEAFRAFQAVARINTDATSVDELYEERRME 910
            L  +RK+ +  EIF  L               G GR E  E  P L+LLGGGM AGK+T+++++   +FW K  +  V +EAD  K  D + + L+ +      P  S  VH YST+AAE + ++A+  ++DI+FD T+ WAPF+ QT+ MVRD++H Y+RGPGY                 + E+G           ERYW  + + P ++   PYR+ELVGV   P +AV R + R+L TGR VP+  QLRSH LF++N+E  +   D+ TLY                        +    +  +VIA +        +++  A+R F   +R+N  A    EL+ + R +
Sbjct:  424 LGVQRKFQTLYEIFSEL------------NRSGSGRSETQERGPVLLLLGGGMAAGKSTVREIIGHDDFWSKVCKDAVVIEADAIKNRDVMLKHLSSSDFTKNDPTLSSYVHEYSTKAAEAMLVAAVNKQKDIVFDGTMTWAPFVEQTIAMVRDHQHNYRRGPGY----------------FTNEHGD--------TVERYWDRDDSTPSEECKRPYRIELVGVTCDPGLAVARGVWRKLRTGRSVPISSQLRSHRLFSENWEPLAHLADSATLYHTG--------------SALTTFNKGNVNLNPKVIAHRSSATRGEMLVNSRAYRQFCHKSRLNDTARCRGELFPDARAD 727          
BLAST of NO12G02920 vs. NCBI_GenBank
Match: XP_004990962.1 (hypothetical protein PTSG_12588 [Salpingoeca rosetta] >EGD77123.1 hypothetical protein PTSG_12588 [Salpingoeca rosetta])

HSP 1 Score: 171.0 bits (432), Expect = 1.700e-38
Identity = 104/308 (33.77%), Postives = 160/308 (51.95%), Query Frame = 0
Query:  603 PHLILLGGGMGAGKTTLKKMVSQTEFWRKHGQHVVSVEADHFKAIDPVYQLLTRAKLPKASEQVHNYSTQAAEELFLSALKFRRDIIFDSTLAWAPFLMQTLDMVRDNRHTYKRGPGYVETPSPPPSTGSNNGSISGENGKEGGSSSMVVEERYW--AIETTLPRDQQVTPYRVELVGVFVRPEVAVRRAIIRRLLTGRG-VPVRDQLRSHALFAKNFEKFSMTFDTVTLYDNNRRHDRVPXXXXXXXXXXXXXXEEERLV--GSRVIARKDVEDTELKILDVEAFRAFQAVARINTDATSVDELYEE 906
            PH++  GGG+G+GK++  + +  +  W + G   + +EAD  K  DP+++ L      +ASE VH+ ST+ AE +   A+  RR I+FDST+ W PF+ QT+ M+RD  H Y+RGPGYV         GS  G                V E YW    + T  R     PYR+ ++ V   P VAVRRAI+R ++TGR   P R  L SH +F+ NF  ++  FD + L+DN    D                      V   +++IA K V+D++++++D++A+  F   A +N  AT   E++E+
Sbjct:  981 PHIVFTGGGIGSGKSSALRQLHASPLWSQCGPRFLHIEADALKDKDPLFKALKGVGQSRASEVVHHQSTRTAEGMLAVAVAQRRHIVFDSTMMWRPFVEQTVAMLRDCEHEYRRGPGYV--------VGSGGG----------------VTETYWEQVKDATTKR-----PYRLTMLAVTAPPHVAVRRAILRWIVTGRAPSPTRQVLASHKMFSANFRAYARMFDEILLFDNGDDSDDSVDIMHVLPPTLHYLISTSHDVPCTAKLIAVKSVDDSDVRVVDIDAYVRFLKKADLNPAATCAHEVFEQ 1259          
BLAST of NO12G02920 vs. NCBI_GenBank
Match: XP_011650947.1 (PREDICTED: uncharacterized protein LOC101217085 [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 2.100e-36
Identity = 119/358 (33.24%), Postives = 177/358 (49.44%), Query Frame = 0
Query:  559 RDLASRRKWVSAMEIFRALGC---HDEASCRALTRAQGRGRDERVEPPHLILLGGGMGAGKTTLKKMVSQTEFWRKHGQHVVSVEADHFKAIDPVYQLLT----RAKLPKASEQVHNYSTQAAEELFLSALKFRRDIIFDSTLAWAPFLMQTLDMVRD-NRHTYKRGPGYVETPSPPPSTGSNNGSISGENGKEGGSSSMVVEERYWAIETTLPRD---QQVTPYRVELVGVFVRPEVAVRRAIIRRLLTGRGVPVRDQLRSHALFAKNFEKFSMTFDTVTLYDNNRRHDRVPXXXXXXXXXXXXXXEEERLVGS--RVIARKDVEDTELKILDVEAFRAFQAVARINTDATSVDELY 904
            +DL   R + + +E  + +GC     E+ C +LT+ +     +R   P L+++GGGMGAGK+T+ K + +  FW +   + V+VEAD FK  D +Y+ ++       + + +E VH  S  AA  L ++AL   RD+I DSTL+WAP++MQT++M R+ ++  Y+ G GY                   ENG+        V E YW   +    D   Q   PYR+ELVGV     +AV R I R ++ GR V V  QL+SH  FA  F K+S   D+V LY  N                          +G+  ++I RKD  D   + +D EA      ++ +N DA SV ELY
Sbjct:  173 KDLKMTRVFSTLVEEMKKIGCAASKGESKC-SLTKPRS---SQRQRSPVLLMMGGGMGAGKSTVLKDILKEPFWLEAETNTVTVEADAFKETDVIYKAISSMGYHDDMLQTAELVHQPSIDAASSLLVTALNEGRDVILDSTLSWAPYVMQTIEMARNIHKRRYRMGVGY-----------------KVENGE--------VTENYWEPVSEEEEDGEMQDRMPYRIELVGVVCDAHLAVVRGIRRAIMMGRAVRVNSQLQSHKRFANAFPKYSEVVDSVRLYSTN-------------------------FIGNPPKLIHRKDGTD-PFQTIDAEASACLTTLSNLNPDAESVYELY 475          
BLAST of NO12G02920 vs. NCBI_GenBank
Match: KGN56910.1 (hypothetical protein Csa_3G143510 [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 2.100e-36
Identity = 119/358 (33.24%), Postives = 177/358 (49.44%), Query Frame = 0
Query:  559 RDLASRRKWVSAMEIFRALGC---HDEASCRALTRAQGRGRDERVEPPHLILLGGGMGAGKTTLKKMVSQTEFWRKHGQHVVSVEADHFKAIDPVYQLLT----RAKLPKASEQVHNYSTQAAEELFLSALKFRRDIIFDSTLAWAPFLMQTLDMVRD-NRHTYKRGPGYVETPSPPPSTGSNNGSISGENGKEGGSSSMVVEERYWAIETTLPRD---QQVTPYRVELVGVFVRPEVAVRRAIIRRLLTGRGVPVRDQLRSHALFAKNFEKFSMTFDTVTLYDNNRRHDRVPXXXXXXXXXXXXXXEEERLVGS--RVIARKDVEDTELKILDVEAFRAFQAVARINTDATSVDELY 904
            +DL   R + + +E  + +GC     E+ C +LT+ +     +R   P L+++GGGMGAGK+T+ K + +  FW +   + V+VEAD FK  D +Y+ ++       + + +E VH  S  AA  L ++AL   RD+I DSTL+WAP++MQT++M R+ ++  Y+ G GY                   ENG+        V E YW   +    D   Q   PYR+ELVGV     +AV R I R ++ GR V V  QL+SH  FA  F K+S   D+V LY  N                          +G+  ++I RKD  D   + +D EA      ++ +N DA SV ELY
Sbjct:  202 KDLKMTRVFSTLVEEMKKIGCAASKGESKC-SLTKPRS---SQRQRSPVLLMMGGGMGAGKSTVLKDILKEPFWLEAETNTVTVEADAFKETDVIYKAISSMGYHDDMLQTAELVHQPSIDAASSLLVTALNEGRDVILDSTLSWAPYVMQTIEMARNIHKRRYRMGVGY-----------------KVENGE--------VTENYWEPVSEEEEDGEMQDRMPYRIELVGVVCDAHLAVVRGIRRAIMMGRAVRVNSQLQSHKRFANAFPKYSEVVDSVRLYSTN-------------------------FIGNPPKLIHRKDGTD-PFQTIDAEASACLTTLSNLNPDAESVYELY 504          
BLAST of NO12G02920 vs. NCBI_GenBank
Match: EFJ30534.1 (hypothetical protein SELMODRAFT_231175 [Selaginella moellendorffii])

HSP 1 Score: 162.5 bits (410), Expect = 6.000e-36
Identity = 113/328 (34.45%), Postives = 162/328 (49.39%), Query Frame = 0
Query:  603 PHLILLGGGMGAGKTTLKKMVSQTEFWRKHGQHVVSVEADHFKAIDPVYQLLTRAK------LPKASEQVHNYSTQAAEELFLSALKFRRDIIFDSTLAWAPFLMQTLDMVRD-NRHTYKRGPGYVETPSPPPSTGSNNGSISGENGKEGGSSSMVVEERYWAIETTLPRD-----------QQVTPYRVELVGVFVRPEVAVRRAIIRRLLTGRGVPVRDQLRSHALFAKNFEKFSMTFDTVTLYDNNRRHDRVPXXXXXXXXXXXXXXEEERLVGSRVIARKDVEDTELKILDVEAFRAFQAVARINTDATSVDELYEERRMERGD 913
            P L+ +GGGMGAGK+T+ K +    FW    Q  V VEAD FK  D VY+ ++ ++      +  ASE VH+ ST AA  L +SAL   RD+IFD T++W PF+ QT+ M RD +   Y+ GPGYV++                E+G         V E YW     +PR+           +   PYR+ELVGV   P +AV R I R ++T R VP++ QLRSH LFA + EK+    D   +Y  N+                    E   L+G     + D+      ++D  AF++ + +A IN +A S+ EL+   R +  D
Sbjct:  110 PVLLFIGGGMGAGKSTVVKEILAGSFWSGVVQDTVVVEADAFKETDVVYRTISSSERGDGGDIAMASELVHSSSTMAASSLLVSALNDGRDVIFDGTMSWEPFVAQTIAMARDVHNRRYRMGPGYVKS----------------EDG--------TVVEEYW-----VPRELGNASSEKFARKSRRPYRIELVGVTCEPVLAVERGIRRAIITKRAVPIKGQLRSHKLFAGSLEKYCELVDNAKIYTTNK------------------VGEPAELIG----WKDDLSRCSKLLVDPAAFQSVKKLAGINENAGSILELFAGSRDDPSD 386          
BLAST of NO12G02920 vs. NCBI_GenBank
Match: CUG06355.1 (Hypothetical protein, putative [Bodo saltans])

HSP 1 Score: 162.5 bits (410), Expect = 6.000e-36
Identity = 112/323 (34.67%), Postives = 164/323 (50.77%), Query Frame = 0
Query:  582 EASCRALTRAQGRGRDERVEPPHLILLGGGMGAGKTTLKKMVSQTEFWRKHGQHVVSVEADHFKAIDPVYQLLTRAKLPKASEQVHNYSTQAAEELFLSALKFRRDIIFDSTLAWAPFLMQTLDMVRD-NRHTYKRGPGYVETPSPPPSTGSNNGSISGENGKEGGSSSMVVEERYWAIETTLPRDQQVTPYRVELVGVFVRPEVAVRRAIIRRLLTGRGVPVRDQLRSHALFAKNFEKFSMTFDTVTLYDNNRRHDRVPXXXXXXXXXXXXXXEEERLVGSRVIARKDVEDTELKILDVEAFRAFQAVARINTDATSVDELY 904
            EA+ +A T A+        +PP  I LGGGM AGKTT    ++++E+W  H   VV V+AD FK  DP+       +  K S+ +H  ST+ AE+L ++AL   R +IFD T+ WAPF+ QT  MVR+ + H +  GPG+ E              ++ E   E G++  V  E                PY +  + + V P  AV R I+R + TGR VP+R QLRS  LF++ FE+++   D VTLY+NN R D                  E+  +  R++  KD +D E+ + D +A+  F+    IN  AT  DE+Y
Sbjct:  962 EATSKAHTSAE--------DPPFFIFLGGGMAAGKTTAATALTRSEWWEAHKDQVVVVDADTFKMADPI-------RKTKPSD-LHEQSTKYAEKLLVTALNQGRSVIFDGTMMWAPFVEQTAAMVREAHTHYFSMGPGFDE-------------KLNIEQYWERGNARSVPLE---------------VPYHILFLAITVEPHEAVPRGILRGVTTGRTVPIRSQLRSFRLFSEGFERYASLCDEVTLYNNNIRVDL-----------------EQGQLPPRIL-HKDSKDQEIVVEDAQAYENFRRHRTINDRATCCDEIY 1222          
BLAST of NO12G02920 vs. NCBI_GenBank
Match: XP_008438579.1 (PREDICTED: uncharacterized protein LOC103483643 [Cucumis melo])

HSP 1 Score: 162.2 bits (409), Expect = 7.900e-36
Identity = 118/358 (32.96%), Postives = 172/358 (48.04%), Query Frame = 0
Query:  559 RDLASRRKWVSAMEIFRALGC---HDEASCRALTRAQGRGRDERVEPPHLILLGGGMGAGKTTLKKMVSQTEFWRKHGQHVVSVEADHFKAIDPVYQLLT----RAKLPKASEQVHNYSTQAAEELFLSALKFRRDIIFDSTLAWAPFLMQTLDMVRD-NRHTYKRGPGYVETPSPPPSTGSNNGSISGENGKEGGSSSMVVEERYWAIETTLPRDQQV---TPYRVELVGVFVRPEVAVRRAIIRRLLTGRGVPVRDQLRSHALFAKNFEKFSMTFDTVTLYDNNRRHDRVPXXXXXXXXXXXXXXEEERLVGS--RVIARKDVEDTELKILDVEAFRAFQAVARINTDATSVDELY 904
            +DL   R + + +E  + +GC     E+ C   T        +R   P L+L+GGGMGAGK+T+ K + +  FW +   + V VEAD FK  D +Y+ ++       + + +E VH  S  AA  L ++AL   RD+I DSTL+W P++MQT++M R+ ++  Y+ G GY                   ENGK        V E YW   +    D+++    PYR+ELVGV     +AV R I R ++ GR V V  QL+SH  FA  F K S   D+V LY  N                          +G+  ++I RKD  D   + +D EA      ++ +N DA SV ELY
Sbjct:  173 KDLKMTRVFSTLVEEMKKIGCAASKGESKCSLTTPRS----SQRQRSPVLLLMGGGMGAGKSTVLKDILKEPFWLEAETNTVKVEADAFKETDVIYKAISSMGYHDDMLQTAELVHQPSIDAASSLLVTALNEGRDVILDSTLSWEPYVMQTIEMARNIHKRRYRMGVGY-----------------KVENGK--------VTENYWEPVSEEEEDEEMQDRMPYRIELVGVVCDAHLAVVRGIRRAIMMGRAVRVSSQLQSHKRFANAFPKHSEVVDSVRLYSTN-------------------------YIGNPPKLIHRKDGTD-PFQTIDAEASACLTTLSNLNPDAESVYELY 475          
The following BLAST results are available for this feature:
BLAST of NO12G02920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25742.14.000e-8070.40uncharacterized protein Naga_100087g24 [Nannochlor... [more]
PRP88167.13.200e-4534.47hypothetical protein PROFUN_03990 [Planoprotosteli... [more]
XP_005716323.11.800e-4344.07unnamed protein product [Chondrus crispus] >CDF365... [more]
XP_005648203.17.400e-4233.33hypothetical protein COCSUDRAFT_66031 [Coccomyxa s... [more]
XP_004990962.11.700e-3833.77hypothetical protein PTSG_12588 [Salpingoeca roset... [more]
XP_011650947.12.100e-3633.24PREDICTED: uncharacterized protein LOC101217085 [C... [more]
KGN56910.12.100e-3633.24hypothetical protein Csa_3G143510 [Cucumis sativus... [more]
EFJ30534.16.000e-3634.45hypothetical protein SELMODRAFT_231175 [Selaginell... [more]
CUG06355.16.000e-3634.67Hypothetical protein, putative [Bodo saltans][more]
XP_008438579.17.900e-3632.96PREDICTED: uncharacterized protein LOC103483643 [C... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010237NSK010237Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02920.1NO12G02920.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|67346gene_5464Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100087g24gene4769Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02920.1NO12G02920.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02920 ID=NO12G02920|Name=NO12G02920|organism=Nannochloropsis oceanica|type=gene|length=3083bp
ATGGCCTTTGCTGCAGCAGCCTACGGGCCAAAGACCACGGCTGGAAAGGA
CCCGCCGCTACCCCGCCTCTTGTTCACCTCCTCGGCCCCATCAGGCGATG
TGTCTGATGCATCTCCCTTGCCAAGTTTTGCAGAGTTTGTGGTCAGCTCC
TGGGGGTGCACCAAAGAGCAAGGCGAGAACTATGATAAGGCCCTGGCACT
GGCAGAGACGAATCTTTTCGGGCATTTGGACGAGGAGGCAGTTGACGCGA
GTAACACCTCCCCGCTGTGTCCCCTTGCACCGACGTCATTGTCTGCGTGC
CCTTCCTCCGCCAGTAGTGTCAAGGACGACGAGGACCCCGAAAGACCGAA
GCCACCGTTGATCGAGCATTTGGACGACTTGGCCGCGGAATATTTCGGGC
GGAACTGGGATCGAGTGGATGAATTGGTTCGAGTCAACCAAGAACGCCTG
GAGGCATGGAAAGCCGCCCGGGCCTTCCAAAAGAACGAGCAGCAACAAGG
ACAAGAGCATGAGCAGCATGGGAAGGATCATGGAGTAGAGGGATCTTGGC
CAGGCTTGGCAACGTTCTCTTCCTCGTCCTTGTCCTGTGCGAGGGAGTCG
GTGACGCACCAACAGCAGTCCCAGAAGAGACATAGCCTGCTGGAAACCAC
AGAGGGAGCAACAACAGAGGGAAAAGAATCAGAGGCAGCAACGCCAGCTG
CGGCAGAAGAAGCAAAGTCAGGAAACCGCTCGTGCACACAAGAAGGCTCC
CGCTATCCCCCTTCTTCCTCCGAACCTGCTTTAGGCAGCGTCATCGAAAT
CAACGAGGGTGGAATCGATCTCTTACTCTCCGGCCTGCCAGGCCCTGCCG
TACAAAACGGCCGACAAACCACCATTCCAAATCTCGAACAAGCCGAGCTC
ATCCTTCTGGAGGTCCACTCTGACCATTGCCCTGCCTGCCGGCGCCTTGC
CCCCTCCCTCGCTACTGCTGCGGCGCATTACAGGGACAATCCATCCGTGT
TATTCGTCACTGTCAACGGCCCTGAGAATCCTGCCTTTCTCGAGCGGTTA
GACGTACAATGGTTCCCGACCTTGAAAGTCATCCATCGCAAGAGCAACAT
GTTGTGGGACTGGCCTCCTCTGCCTGTGGGAGGGCTAGAAAGCGAGGAGA
TAATCAAGAGAATGGGGGAGTGGTTGGCTCAGCCGTCCTCCCTCTCGGCG
TCGGGGGTGGATGGGGTGTTGATGGACCAGCAGGGGTATTATGAAGACGG
CGAGAAGGGGAGGGATGGAGGGGAGGGAGGAGAGGATGGGGAAGGGAGAG
GGGAAGGAGGAGCATCAAGAGCAGCTGCTGCCGTTGGACCTCCCCCGGGA
GTCAGCAACGATGACGAGGATCAAGCAAAGGAAGGGGAAGGAGACACAAA
AAGAGTAGAAAAGAATGGAGCAGCGACACCATCACCACCACACTCAACCT
CCTCGACCTTCCCTCCCTCCCTCCCCTTTCTCCAAAAGCGCAAGCCCTCC
TCCTCCTCCCCCTGCGCCAAGCCCCCCAAAAAAACCCACCTCGATACCAT
CTTAAATAGACCTCCCGGCGCTGCTGCTGCTGATGCTGCTGCTGTTGCAA
GCCAAGTTCCCCATGACGACCAACCCCCCTCCTTCGACCAGATTTCCCAG
CTCCACACCGAGCTCAGCTGCAGACGTGACTTGGCTTCCCGCCGGAAGTG
GGTCAGTGCCATGGAGATATTCAGAGCCTTAGGGTGTCACGACGAGGCGT
CCTGCCGGGCCTTGACCAGGGCGCAGGGGAGGGGGAGGGATGAGAGGGTG
GAGCCTCCACATTTAATATTGTTGGGGGGGGGGATGGGCGCGGGGAAAAC
GACGTTGAAGAAGATGGTGAGCCAGACTGAGTTCTGGAGGAAGCACGGGC
AGgtaggcgaggaaggagggagggacggagggagggacggagggacggac
ggatgggtagaaagggagaatggggtgtgtgcaggtgatcttgagaagag
gtccggacagggaggagggtacattatgtttttggcgacactaactcccc
ccccctttccttccttcgtccattctttcgtccttttgtagCATGTAGTC
TCCGTCGAAGCCGACCACTTCAAAGCCATCGATCCTGTCTATCAGCTCCT
AACCCGCGCGAAGCTACCTAAGGCGTCCGAGCAGGTCCACAACTACAGCA
CGCAGGCAGCAGAGGAGCTCTTTCTTTCCGCCCTAAAATTTAGGAGGGAC
ATCATCTTTGACTCGACCCTAGgtaggactggaaggaggaagggggggag
ggcgaggtcgggaggggcctttgtgacaagtgctcacacacacacacaca
cacatacccaacctcccctccctccctccctccctctctccctccacatc
gcacagCCTGGGCCCCCTTTCTTATGCAAACCCTGGACATGGTTCGCGAC
AACCGCCATACCTACAAACGCGGCCCGGGCTACGTGGAGACCCCATCCCC
CCCTCCCTCCACCGGCAGCAACAACGGCAGTATCAGCGGTGAGAATGGGA
AGGAGGGAGGATCATCCTCGATGGTTGTAGAGGAAAGGTATTGGGCGATC
GAGACAACGTTACCGAGGGATCAGCAGGTAACGCCTTACAGGGTGGAGTT
GGTTGGTGTCTTTGTACGGCCGGAGGTCGCCGTACGGAGGGCGATTATTC
GGAGGTTGTTGACGGGGAGAGGGGTACCGGTCAGGGATCAGTTGAGGAGC
CATGCGTTGTTTGCGAAGAATTTTGAGAAATTTTCCATGACGTTTGACAC
GGTGACATTGTACGATAATAATCGGAGGCATGACCGTGTGCCGGGGAGAG
GAGGAGGAAGGGGGTCAGGAAGAGGGGGAGGCAATGAGGAGGAGAGGCTG
GTGGGGTCACGGGTGATTGCAAGAAAGGACGTCGAGGACACAGAATTGAA
AATTTTGGATGTCGAAGCCTTTAGAGCGTTTCAGGCAGTTGCAAGGATAA
ATACAGATGCAACGTCGGTCGATGAGTTGTATGAGGAGCGGCGAATGGAA
AGGGGGGATGGAGAGGAAAGGGTTGTGGAATAA
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protein sequence of NO12G02920.1

>NO12G02920.1-protein ID=NO12G02920.1-protein|Name=NO12G02920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=920bp
MAFAAAAYGPKTTAGKDPPLPRLLFTSSAPSGDVSDASPLPSFAEFVVSS
WGCTKEQGENYDKALALAETNLFGHLDEEAVDASNTSPLCPLAPTSLSAC
PSSASSVKDDEDPERPKPPLIEHLDDLAAEYFGRNWDRVDELVRVNQERL
EAWKAARAFQKNEQQQGQEHEQHGKDHGVEGSWPGLATFSSSSLSCARES
VTHQQQSQKRHSLLETTEGATTEGKESEAATPAAAEEAKSGNRSCTQEGS
RYPPSSSEPALGSVIEINEGGIDLLLSGLPGPAVQNGRQTTIPNLEQAEL
ILLEVHSDHCPACRRLAPSLATAAAHYRDNPSVLFVTVNGPENPAFLERL
DVQWFPTLKVIHRKSNMLWDWPPLPVGGLESEEIIKRMGEWLAQPSSLSA
SGVDGVLMDQQGYYEDGEKGRDGGEGGEDGEGRGEGGASRAAAAVGPPPG
VSNDDEDQAKEGEGDTKRVEKNGAATPSPPHSTSSTFPPSLPFLQKRKPS
SSSPCAKPPKKTHLDTILNRPPGAAAADAAAVASQVPHDDQPPSFDQISQ
LHTELSCRRDLASRRKWVSAMEIFRALGCHDEASCRALTRAQGRGRDERV
EPPHLILLGGGMGAGKTTLKKMVSQTEFWRKHGQHVVSVEADHFKAIDPV
YQLLTRAKLPKASEQVHNYSTQAAEELFLSALKFRRDIIFDSTLAWAPFL
MQTLDMVRDNRHTYKRGPGYVETPSPPPSTGSNNGSISGENGKEGGSSSM
VVEERYWAIETTLPRDQQVTPYRVELVGVFVRPEVAVRRAIIRRLLTGRG
VPVRDQLRSHALFAKNFEKFSMTFDTVTLYDNNRRHDRVPGRGGGRGSGR
GGGNEEERLVGSRVIARKDVEDTELKILDVEAFRAFQAVARINTDATSVD
ELYEERRMERGDGEERVVE*
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Synonyms
Publications