NO12G02910, NO12G02910 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G02910 vs. NCBI_GenBank
Match: ETM49577.1 (hypothetical protein L914_06201 [Phytophthora parasitica]) HSP 1 Score: 84.3 bits (207), Expect = 1.000e-12 Identity = 67/263 (25.48%), Postives = 104/263 (39.54%), Query Frame = 0 Query: 47 GLGLAALSPQGYAAGDVVLALPLTVWGPTSAHFALQNAQATAPAF---YQTLIAIDEELGGGKQKLLQPVALATHLSLAL---LDPDDAV--------HPYARFLYETSQKGVPHPLLLDPHVLREGLQASPVVAAVKKRQELFTYVHQRLFGSAATATPAETIPNQASFLPISIFLWSLSRVLSRGVSGPGKPLTFLPFYDLMNHRRAEANCEYTLDINEGTIEVKATRTIEGGEELFLCYSDTKDNHQMFLTYGFVDEGNP 296 G+G+ ++ + +V VW P SA +AL+ AQ AP F L+A + L G + + L H+ DPD + P + V PL D +E A++ ++ V+Q LFG N F+ F W++S ++SR SG + +PF+D NH C D +G V T++ E GE+LF+ Y + N ++ YGF NP Sbjct: 31 GMGVGIVAREQIPKDTLVFQAGQDVWYPFSAEYALETAQQKAPGFLNQLNQLMASSKSLREGSSFVPSALVLGVHMLANFPHAEDPDALLMAMASVDKPPLDELYVNALPRYVDLPLYWDDKQFKELQGCEETRRAMQHGARFYSQVYQHLFG------------NNNEFINPEAFFWAISILMSRATSGQNQSFALIPFFDWFNHADNGDECVQEFDPLKG-FTVHTTKSYEPGEQLFINYGN-HGNLRLLRNYGFTTPNNP 279
BLAST of NO12G02910 vs. NCBI_GenBank
Match: ETM49578.1 (hypothetical protein, variant [Phytophthora parasitica]) HSP 1 Score: 84.3 bits (207), Expect = 1.000e-12 Identity = 67/263 (25.48%), Postives = 104/263 (39.54%), Query Frame = 0 Query: 47 GLGLAALSPQGYAAGDVVLALPLTVWGPTSAHFALQNAQATAPAF---YQTLIAIDEELGGGKQKLLQPVALATHLSLAL---LDPDDAV--------HPYARFLYETSQKGVPHPLLLDPHVLREGLQASPVVAAVKKRQELFTYVHQRLFGSAATATPAETIPNQASFLPISIFLWSLSRVLSRGVSGPGKPLTFLPFYDLMNHRRAEANCEYTLDINEGTIEVKATRTIEGGEELFLCYSDTKDNHQMFLTYGFVDEGNP 296 G+G+ ++ + +V VW P SA +AL+ AQ AP F L+A + L G + + L H+ DPD + P + V PL D +E A++ ++ V+Q LFG N F+ F W++S ++SR SG + +PF+D NH C D +G V T++ E GE+LF+ Y + N ++ YGF NP Sbjct: 31 GMGVGIVAREQIPKDTLVFQAGQDVWYPFSAEYALETAQQKAPGFLNQLNQLMASSKSLREGSSFVPSALVLGVHMLANFPHAEDPDALLMAMASVDKPPLDELYVNALPRYVDLPLYWDDKQFKELQGCEETRRAMQHGARFYSQVYQHLFG------------NNNEFINPEAFFWAISILMSRATSGQNQSFALIPFFDWFNHADNGDECVQEFDPLKG-FTVHTTKSYEPGEQLFINYGN-HGNLRLLRNYGFTTPNNP 279
BLAST of NO12G02910 vs. NCBI_GenBank
Match: GBG27145.1 (Histone-lysine N-methyltransferase setd3 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 68.2 bits (165), Expect = 7.500e-8 Identity = 73/290 (25.17%), Postives = 109/290 (37.59%), Query Frame = 0 Query: 45 SNGLGLAALSPQGYAAGDVVLALPLTVWGPTSAHFALQNAQATAPAFYQTLIAIDEELGGGKQK---LLQPVALATHLSLALLDPDD---AVHPYARFLYETSQKGVPHPLLLDPHVLREGLQASPVVAAVKKRQELFTYVHQRLFGSAATATP-AETIPNQASFLPISIFLWSLSRVLSRGVSG--PGKPLTFLPFYDLMNHRRA-------------------------------EANCEYTLDINEGTIEVKATRTIEGGEELFLCYSDTKDNHQMFLTYGFVDEGN 295 ++G+GL ++ + AG VL LP ++W P SA A + PA L+ + Q L+ V HL + P A+H K V PL D + LQASP+V+ + +R++L + + A P A P+ S F WSL +LSR +S P T P D+MNH A + C++ D + V + + G +LF+ Y D N + YGF E N Sbjct: 28 ADGMGLGLVATRKLRAGQPVLRLPESLWRPLSADEAYVQLKDRHPALLDDLMDFAQAQDIPMQSRLLLVGSVCFVLHLLREIAAPSSEATALH------LNAMPKSVSTPLFWDATQMAR-LQASPLVSKISERRQLIDSIFTHVVEPHVGAMPEANVTPSNFS------FAWSL--LLSRAISDLRSRMPFTLPPVLDMMNHVSAANASQISSFLPHSALGSEPTATVSPMSADVPQGKCQHWFDHLSSSFVVAPLQDVPEGSQLFISYGDL-SNADLLRLYGFTMEAN 301
BLAST of NO12G02910 vs. NCBI_GenBank
Match: EFJ15360.1 (hypothetical protein SELMODRAFT_445547 [Selaginella moellendorffii]) HSP 1 Score: 67.0 bits (162), Expect = 1.700e-7 Identity = 46/167 (27.54%), Postives = 73/167 (43.71%), Query Frame = 0 Query: 131 HPYARFLYETSQKGVPHPLLLDPHVLREGLQASPVVAAVKKRQELFTYVHQRLFGSAATA-TPAETIPNQASFLPISIFLWSLSRVLSRGVSGPGKPLTFLPFYDLMNH--RRAEANCEYTLDINEGTIEVKATRTIEGGEELFLCYSDTKDNHQMFLTYGFVDEGN 295 HPY L + + HPLL ++E LQ SP++ + R +L H+ L + P ++ S L S + L V L +P+ D++NH E +C D + T ++A ++ G+E+F Y Q+FL YGFVD+ N Sbjct: 129 HPYIAALPSVDELSISHPLLWPAETIQELLQGSPMLDTIATRLKLCQEDHEALLTAGIEKFLPGGETLSEGDVRWASAVLLSRAFSLELDVDDDFDTLCLVPWADMLNHCSSAGEESC-LIFDQDTKTASLEAHKSYSKGDEVFDSYGPALTGSQLFLDYGFVDDEN 294
BLAST of NO12G02910 vs. NCBI_GenBank
Match: EFJ24988.1 (hypothetical protein SELMODRAFT_414219 [Selaginella moellendorffii]) HSP 1 Score: 67.0 bits (162), Expect = 1.700e-7 Identity = 46/167 (27.54%), Postives = 73/167 (43.71%), Query Frame = 0 Query: 131 HPYARFLYETSQKGVPHPLLLDPHVLREGLQASPVVAAVKKRQELFTYVHQRLFGSAATA-TPAETIPNQASFLPISIFLWSLSRVLSRGVSGPGKPLTFLPFYDLMNH--RRAEANCEYTLDINEGTIEVKATRTIEGGEELFLCYSDTKDNHQMFLTYGFVDEGN 295 HPY L + + HPLL ++E LQ SP++ + R +L H+ L + P ++ S L S + L V L +P+ D++NH E +C D + T ++A ++ G+E+F Y Q+FL YGFVD+ N Sbjct: 129 HPYISALPSVEELSISHPLLWPAETIQELLQGSPMLDTIATRLKLCQEDHEALLTAGIEKFLPGGETLSEGDVRWASAVLLSRAFSLELDVDDDFDTLCLVPWADMLNHCSSAGEESC-LIFDQDTKTASLEAHKSYSKGDEVFDSYGPALTGSQLFLDYGFVDDEN 294
BLAST of NO12G02910 vs. NCBI_GenBank
Match: XP_024534535.1 (N-lysine methyltransferase SETD6 [Selaginella moellendorffii] >XP_024534536.1 N-lysine methyltransferase SETD6 [Selaginella moellendorffii]) HSP 1 Score: 67.0 bits (162), Expect = 1.700e-7 Identity = 46/167 (27.54%), Postives = 73/167 (43.71%), Query Frame = 0 Query: 131 HPYARFLYETSQKGVPHPLLLDPHVLREGLQASPVVAAVKKRQELFTYVHQRLFGSAATA-TPAETIPNQASFLPISIFLWSLSRVLSRGVSGPGKPLTFLPFYDLMNH--RRAEANCEYTLDINEGTIEVKATRTIEGGEELFLCYSDTKDNHQMFLTYGFVDEGN 295 HPY L + + HPLL ++E LQ SP++ + R +L H+ L + P ++ S L S + L V L +P+ D++NH E +C D + T ++A ++ G+E+F Y Q+FL YGFVD+ N Sbjct: 129 HPYISALPSVEELSISHPLLWPAETIQELLQGSPMLDTIATRLKLCQEDHEALLTAGIEKFLPGGETLSEGDVRWASAVLLSRAFSLELDVDDDFDTLCLVPWADMLNHCSSAGEESC-LIFDQDTKTASLEAHKSYSKGDEVFDSYGPALTGSQLFLDYGFVDDEN 294
BLAST of NO12G02910 vs. NCBI_GenBank
Match: XP_024544320.1 (N-lysine methyltransferase SETD6 [Selaginella moellendorffii]) HSP 1 Score: 67.0 bits (162), Expect = 1.700e-7 Identity = 46/167 (27.54%), Postives = 73/167 (43.71%), Query Frame = 0 Query: 131 HPYARFLYETSQKGVPHPLLLDPHVLREGLQASPVVAAVKKRQELFTYVHQRLFGSAATA-TPAETIPNQASFLPISIFLWSLSRVLSRGVSGPGKPLTFLPFYDLMNH--RRAEANCEYTLDINEGTIEVKATRTIEGGEELFLCYSDTKDNHQMFLTYGFVDEGN 295 HPY L + + HPLL ++E LQ SP++ + R +L H+ L + P ++ S L S + L V L +P+ D++NH E +C D + T ++A ++ G+E+F Y Q+FL YGFVD+ N Sbjct: 129 HPYIAALPSVDELSISHPLLWPAETIQELLQGSPMLDTIATRLKLCQEDHEALLTAGIEKFLPGGETLSEGDVRWASAVLLSRAFSLELDVDDDFDTLCLVPWADMLNHCSSAGEESC-LIFDQDTKTASLEAHKSYSKGDEVFDSYGPALTGSQLFLDYGFVDDEN 294
BLAST of NO12G02910 vs. NCBI_GenBank
Match: PTQ46222.1 (hypothetical protein MARPO_0012s0150 [Marchantia polymorpha]) HSP 1 Score: 65.9 bits (159), Expect = 3.700e-7 Identity = 35/105 (33.33%), Postives = 56/105 (53.33%), Query Frame = 0 Query: 197 PNQASFLPISIFLWSLSRVLSRGVSGPGKP------LTFLPFYDLMNHRRAEANCEYTLDINEGTIEVKATRTIEGGEELFLCYSDTKDNHQMFLTYGFVDEGNP 296 PN+ S + + W+++ V SR + P KP F+PF D++NH + + +G +E+ A RT++ GEE+F + + N +FL YGFV E NP Sbjct: 429 PNELSLASYNEYKWAVTMVHSRAFTLPVKPDEQYEQYVFMPFMDMINHHYHYKADWMSQPVWDGKLEITARRTVKKGEEIFASFG-PRTNDNLFLYYGFVLEDNP 532
BLAST of NO12G02910 vs. NCBI_GenBank
Match: XP_001692007.1 (lysine N-methylase [Chlamydomonas reinhardtii]) HSP 1 Score: 65.5 bits (158), Expect = 4.800e-7 Identity = 57/177 (32.20%), Postives = 85/177 (48.02%), Query Frame = 0 Query: 185 GSAATATPAETIPNQASFLPISIFLWSLSRVLSR--GVS-GPGKPLTFLPFYDLMNH--RRAEANCEYTLDINEGTIEVKATRTIEGGEELFLCYSDTKDNHQMFLTYGFVDEGNPV-GMTMRVGLNESEEREEG-GADIEWVIGGGAEEEKKERARFECALAAVRGGKGGRDGLSE 355 G A AT + P + +F W+++ +SR G+S GP T +P D+ NH R +N E +G + + A + I G+E+ L Y T DNH + L+YGF + NP G + + E EG G D + GG ++E + LAA GG+GG DG +E Sbjct: 253 GPRAAATTSGPSPFGGLAVDEELFGWAVAVAMSRCFGLSRGPRPTHTCVPLVDMANHVAPREASNAEIR-GGRDGQVAMYAKKQIRAGDEISLTYG-THDNHNLLLSYGFTLQPNPYDGFYFDLNMETIESLVEGQGGDPD---TGGLAGWQRELIAHKLGLAAGAGGRGGADGGAE 424
BLAST of NO12G02910 vs. NCBI_GenBank
Match: KUF96955.1 (ATP synthase subunit beta [Phytophthora nicotianae]) HSP 1 Score: 65.5 bits (158), Expect = 4.800e-7 Identity = 51/206 (24.76%), Postives = 80/206 (38.83%), Query Frame = 0 Query: 47 GLGLAALSPQGYAAGDVVLALPLTVWGPTSAHFALQNAQATAPAF---YQTLIAIDEELGGGKQKLLQPVALATHLSLAL---LDPDDAV--------HPYARFLYETSQKGVPHPLLLDPHVLREGLQASPVVAAVKKRQELFTYVHQRLFGSAATATPAETIPNQASFLPISIFLWSLSRVLSRGVSGPGKPLTFLPFYDLMNH 239 G+G+ ++ + +V VW P SA +AL+ AQ AP F L+A + L G + + L H+ DPD + P + V PL D +E A++ ++ V+Q LFG N F+ F W++S ++SR SG +P +PF+D NH Sbjct: 31 GMGVGIVAREQIPKDTLVFQAGQDVWYPFSAEYALETAQQKAPGFLNQLNQLMASSKSLREGSSFVPSALVLGVHMLANFPHAEDPDALLMAMASVDKPPLDELYVNALPRYVDLPLYWDDKQFKELQGCEETRRAMQHGARFYSQVYQHLFG------------NNNEFINPEAFFWAISILMSRATSGQNQPFALIPFFDWFNH 224 The following BLAST results are available for this feature:
BLAST of NO12G02910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G02910 ID=NO12G02910|Name=NO12G02910|organism=Nannochloropsis oceanica|type=gene|length=1326bpback to top protein sequence of NO12G02910.1 >NO12G02910.1-protein ID=NO12G02910.1-protein|Name=NO12G02910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=442bpback to top Synonyms
Publications
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