NO12G02910, NO12G02910 (gene) Nannochloropsis oceanica

Overview
NameNO12G02910
Unique NameNO12G02910
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1326
Alignment locationchr12:805084..806409 -

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Properties
Property NameValue
DescriptionSet domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:805084..806409 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001214SET_dom
Homology
BLAST of NO12G02910 vs. NCBI_GenBank
Match: ETM49577.1 (hypothetical protein L914_06201 [Phytophthora parasitica])

HSP 1 Score: 84.3 bits (207), Expect = 1.000e-12
Identity = 67/263 (25.48%), Postives = 104/263 (39.54%), Query Frame = 0
Query:   47 GLGLAALSPQGYAAGDVVLALPLTVWGPTSAHFALQNAQATAPAF---YQTLIAIDEELGGGKQKLLQPVALATHLSLAL---LDPDDAV--------HPYARFLYETSQKGVPHPLLLDPHVLREGLQASPVVAAVKKRQELFTYVHQRLFGSAATATPAETIPNQASFLPISIFLWSLSRVLSRGVSGPGKPLTFLPFYDLMNHRRAEANCEYTLDINEGTIEVKATRTIEGGEELFLCYSDTKDNHQMFLTYGFVDEGNP 296
            G+G+  ++ +      +V      VW P SA +AL+ AQ  AP F      L+A  + L  G   +   + L  H+        DPD  +         P          + V  PL  D    +E         A++     ++ V+Q LFG            N   F+    F W++S ++SR  SG  +    +PF+D  NH      C    D  +G   V  T++ E GE+LF+ Y +   N ++   YGF    NP
Sbjct:   31 GMGVGIVAREQIPKDTLVFQAGQDVWYPFSAEYALETAQQKAPGFLNQLNQLMASSKSLREGSSFVPSALVLGVHMLANFPHAEDPDALLMAMASVDKPPLDELYVNALPRYVDLPLYWDDKQFKELQGCEETRRAMQHGARFYSQVYQHLFG------------NNNEFINPEAFFWAISILMSRATSGQNQSFALIPFFDWFNHADNGDECVQEFDPLKG-FTVHTTKSYEPGEQLFINYGN-HGNLRLLRNYGFTTPNNP 279          
BLAST of NO12G02910 vs. NCBI_GenBank
Match: ETM49578.1 (hypothetical protein, variant [Phytophthora parasitica])

HSP 1 Score: 84.3 bits (207), Expect = 1.000e-12
Identity = 67/263 (25.48%), Postives = 104/263 (39.54%), Query Frame = 0
Query:   47 GLGLAALSPQGYAAGDVVLALPLTVWGPTSAHFALQNAQATAPAF---YQTLIAIDEELGGGKQKLLQPVALATHLSLAL---LDPDDAV--------HPYARFLYETSQKGVPHPLLLDPHVLREGLQASPVVAAVKKRQELFTYVHQRLFGSAATATPAETIPNQASFLPISIFLWSLSRVLSRGVSGPGKPLTFLPFYDLMNHRRAEANCEYTLDINEGTIEVKATRTIEGGEELFLCYSDTKDNHQMFLTYGFVDEGNP 296
            G+G+  ++ +      +V      VW P SA +AL+ AQ  AP F      L+A  + L  G   +   + L  H+        DPD  +         P          + V  PL  D    +E         A++     ++ V+Q LFG            N   F+    F W++S ++SR  SG  +    +PF+D  NH      C    D  +G   V  T++ E GE+LF+ Y +   N ++   YGF    NP
Sbjct:   31 GMGVGIVAREQIPKDTLVFQAGQDVWYPFSAEYALETAQQKAPGFLNQLNQLMASSKSLREGSSFVPSALVLGVHMLANFPHAEDPDALLMAMASVDKPPLDELYVNALPRYVDLPLYWDDKQFKELQGCEETRRAMQHGARFYSQVYQHLFG------------NNNEFINPEAFFWAISILMSRATSGQNQSFALIPFFDWFNHADNGDECVQEFDPLKG-FTVHTTKSYEPGEQLFINYGN-HGNLRLLRNYGFTTPNNP 279          
BLAST of NO12G02910 vs. NCBI_GenBank
Match: GBG27145.1 (Histone-lysine N-methyltransferase setd3 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 68.2 bits (165), Expect = 7.500e-8
Identity = 73/290 (25.17%), Postives = 109/290 (37.59%), Query Frame = 0
Query:   45 SNGLGLAALSPQGYAAGDVVLALPLTVWGPTSAHFALQNAQATAPAFYQTLIAIDEELGGGKQK---LLQPVALATHLSLALLDPDD---AVHPYARFLYETSQKGVPHPLLLDPHVLREGLQASPVVAAVKKRQELFTYVHQRLFGSAATATP-AETIPNQASFLPISIFLWSLSRVLSRGVSG--PGKPLTFLPFYDLMNHRRA-------------------------------EANCEYTLDINEGTIEVKATRTIEGGEELFLCYSDTKDNHQMFLTYGFVDEGN 295
            ++G+GL  ++ +   AG  VL LP ++W P SA  A    +   PA    L+   +      Q    L+  V    HL   +  P     A+H           K V  PL  D   +   LQASP+V+ + +R++L   +   +      A P A   P+  S      F WSL  +LSR +S      P T  P  D+MNH  A                               +  C++  D    +  V   + +  G +LF+ Y D   N  +   YGF  E N
Sbjct:   28 ADGMGLGLVATRKLRAGQPVLRLPESLWRPLSADEAYVQLKDRHPALLDDLMDFAQAQDIPMQSRLLLVGSVCFVLHLLREIAAPSSEATALH------LNAMPKSVSTPLFWDATQMAR-LQASPLVSKISERRQLIDSIFTHVVEPHVGAMPEANVTPSNFS------FAWSL--LLSRAISDLRSRMPFTLPPVLDMMNHVSAANASQISSFLPHSALGSEPTATVSPMSADVPQGKCQHWFDHLSSSFVVAPLQDVPEGSQLFISYGDL-SNADLLRLYGFTMEAN 301          
BLAST of NO12G02910 vs. NCBI_GenBank
Match: EFJ15360.1 (hypothetical protein SELMODRAFT_445547 [Selaginella moellendorffii])

HSP 1 Score: 67.0 bits (162), Expect = 1.700e-7
Identity = 46/167 (27.54%), Postives = 73/167 (43.71%), Query Frame = 0
Query:  131 HPYARFLYETSQKGVPHPLLLDPHVLREGLQASPVVAAVKKRQELFTYVHQRLFGSAATA-TPAETIPNQASFLPISIFLWSLSRVLSRGVSGPGKPLTFLPFYDLMNH--RRAEANCEYTLDINEGTIEVKATRTIEGGEELFLCYSDTKDNHQMFLTYGFVDEGN 295
            HPY   L    +  + HPLL     ++E LQ SP++  +  R +L    H+ L  +      P     ++      S  L S +  L   V      L  +P+ D++NH     E +C    D +  T  ++A ++   G+E+F  Y       Q+FL YGFVD+ N
Sbjct:  129 HPYIAALPSVDELSISHPLLWPAETIQELLQGSPMLDTIATRLKLCQEDHEALLTAGIEKFLPGGETLSEGDVRWASAVLLSRAFSLELDVDDDFDTLCLVPWADMLNHCSSAGEESC-LIFDQDTKTASLEAHKSYSKGDEVFDSYGPALTGSQLFLDYGFVDDEN 294          
BLAST of NO12G02910 vs. NCBI_GenBank
Match: EFJ24988.1 (hypothetical protein SELMODRAFT_414219 [Selaginella moellendorffii])

HSP 1 Score: 67.0 bits (162), Expect = 1.700e-7
Identity = 46/167 (27.54%), Postives = 73/167 (43.71%), Query Frame = 0
Query:  131 HPYARFLYETSQKGVPHPLLLDPHVLREGLQASPVVAAVKKRQELFTYVHQRLFGSAATA-TPAETIPNQASFLPISIFLWSLSRVLSRGVSGPGKPLTFLPFYDLMNH--RRAEANCEYTLDINEGTIEVKATRTIEGGEELFLCYSDTKDNHQMFLTYGFVDEGN 295
            HPY   L    +  + HPLL     ++E LQ SP++  +  R +L    H+ L  +      P     ++      S  L S +  L   V      L  +P+ D++NH     E +C    D +  T  ++A ++   G+E+F  Y       Q+FL YGFVD+ N
Sbjct:  129 HPYISALPSVEELSISHPLLWPAETIQELLQGSPMLDTIATRLKLCQEDHEALLTAGIEKFLPGGETLSEGDVRWASAVLLSRAFSLELDVDDDFDTLCLVPWADMLNHCSSAGEESC-LIFDQDTKTASLEAHKSYSKGDEVFDSYGPALTGSQLFLDYGFVDDEN 294          
BLAST of NO12G02910 vs. NCBI_GenBank
Match: XP_024534535.1 (N-lysine methyltransferase SETD6 [Selaginella moellendorffii] >XP_024534536.1 N-lysine methyltransferase SETD6 [Selaginella moellendorffii])

HSP 1 Score: 67.0 bits (162), Expect = 1.700e-7
Identity = 46/167 (27.54%), Postives = 73/167 (43.71%), Query Frame = 0
Query:  131 HPYARFLYETSQKGVPHPLLLDPHVLREGLQASPVVAAVKKRQELFTYVHQRLFGSAATA-TPAETIPNQASFLPISIFLWSLSRVLSRGVSGPGKPLTFLPFYDLMNH--RRAEANCEYTLDINEGTIEVKATRTIEGGEELFLCYSDTKDNHQMFLTYGFVDEGN 295
            HPY   L    +  + HPLL     ++E LQ SP++  +  R +L    H+ L  +      P     ++      S  L S +  L   V      L  +P+ D++NH     E +C    D +  T  ++A ++   G+E+F  Y       Q+FL YGFVD+ N
Sbjct:  129 HPYISALPSVEELSISHPLLWPAETIQELLQGSPMLDTIATRLKLCQEDHEALLTAGIEKFLPGGETLSEGDVRWASAVLLSRAFSLELDVDDDFDTLCLVPWADMLNHCSSAGEESC-LIFDQDTKTASLEAHKSYSKGDEVFDSYGPALTGSQLFLDYGFVDDEN 294          
BLAST of NO12G02910 vs. NCBI_GenBank
Match: XP_024544320.1 (N-lysine methyltransferase SETD6 [Selaginella moellendorffii])

HSP 1 Score: 67.0 bits (162), Expect = 1.700e-7
Identity = 46/167 (27.54%), Postives = 73/167 (43.71%), Query Frame = 0
Query:  131 HPYARFLYETSQKGVPHPLLLDPHVLREGLQASPVVAAVKKRQELFTYVHQRLFGSAATA-TPAETIPNQASFLPISIFLWSLSRVLSRGVSGPGKPLTFLPFYDLMNH--RRAEANCEYTLDINEGTIEVKATRTIEGGEELFLCYSDTKDNHQMFLTYGFVDEGN 295
            HPY   L    +  + HPLL     ++E LQ SP++  +  R +L    H+ L  +      P     ++      S  L S +  L   V      L  +P+ D++NH     E +C    D +  T  ++A ++   G+E+F  Y       Q+FL YGFVD+ N
Sbjct:  129 HPYIAALPSVDELSISHPLLWPAETIQELLQGSPMLDTIATRLKLCQEDHEALLTAGIEKFLPGGETLSEGDVRWASAVLLSRAFSLELDVDDDFDTLCLVPWADMLNHCSSAGEESC-LIFDQDTKTASLEAHKSYSKGDEVFDSYGPALTGSQLFLDYGFVDDEN 294          
BLAST of NO12G02910 vs. NCBI_GenBank
Match: PTQ46222.1 (hypothetical protein MARPO_0012s0150 [Marchantia polymorpha])

HSP 1 Score: 65.9 bits (159), Expect = 3.700e-7
Identity = 35/105 (33.33%), Postives = 56/105 (53.33%), Query Frame = 0
Query:  197 PNQASFLPISIFLWSLSRVLSRGVSGPGKP------LTFLPFYDLMNHRRAEANCEYTLDINEGTIEVKATRTIEGGEELFLCYSDTKDNHQMFLTYGFVDEGNP 296
            PN+ S    + + W+++ V SR  + P KP        F+PF D++NH         +  + +G +E+ A RT++ GEE+F  +   + N  +FL YGFV E NP
Sbjct:  429 PNELSLASYNEYKWAVTMVHSRAFTLPVKPDEQYEQYVFMPFMDMINHHYHYKADWMSQPVWDGKLEITARRTVKKGEEIFASFG-PRTNDNLFLYYGFVLEDNP 532          
BLAST of NO12G02910 vs. NCBI_GenBank
Match: XP_001692007.1 (lysine N-methylase [Chlamydomonas reinhardtii])

HSP 1 Score: 65.5 bits (158), Expect = 4.800e-7
Identity = 57/177 (32.20%), Postives = 85/177 (48.02%), Query Frame = 0
Query:  185 GSAATATPAETIPNQASFLPISIFLWSLSRVLSR--GVS-GPGKPLTFLPFYDLMNH--RRAEANCEYTLDINEGTIEVKATRTIEGGEELFLCYSDTKDNHQMFLTYGFVDEGNPV-GMTMRVGLNESEEREEG-GADIEWVIGGGAEEEKKERARFECALAAVRGGKGGRDGLSE 355
            G  A AT +   P     +   +F W+++  +SR  G+S GP    T +P  D+ NH   R  +N E      +G + + A + I  G+E+ L Y  T DNH + L+YGF  + NP  G    + +   E   EG G D +    GG    ++E    +  LAA  GG+GG DG +E
Sbjct:  253 GPRAAATTSGPSPFGGLAVDEELFGWAVAVAMSRCFGLSRGPRPTHTCVPLVDMANHVAPREASNAEIR-GGRDGQVAMYAKKQIRAGDEISLTYG-THDNHNLLLSYGFTLQPNPYDGFYFDLNMETIESLVEGQGGDPD---TGGLAGWQRELIAHKLGLAAGAGGRGGADGGAE 424          
BLAST of NO12G02910 vs. NCBI_GenBank
Match: KUF96955.1 (ATP synthase subunit beta [Phytophthora nicotianae])

HSP 1 Score: 65.5 bits (158), Expect = 4.800e-7
Identity = 51/206 (24.76%), Postives = 80/206 (38.83%), Query Frame = 0
Query:   47 GLGLAALSPQGYAAGDVVLALPLTVWGPTSAHFALQNAQATAPAF---YQTLIAIDEELGGGKQKLLQPVALATHLSLAL---LDPDDAV--------HPYARFLYETSQKGVPHPLLLDPHVLREGLQASPVVAAVKKRQELFTYVHQRLFGSAATATPAETIPNQASFLPISIFLWSLSRVLSRGVSGPGKPLTFLPFYDLMNH 239
            G+G+  ++ +      +V      VW P SA +AL+ AQ  AP F      L+A  + L  G   +   + L  H+        DPD  +         P          + V  PL  D    +E         A++     ++ V+Q LFG            N   F+    F W++S ++SR  SG  +P   +PF+D  NH
Sbjct:   31 GMGVGIVAREQIPKDTLVFQAGQDVWYPFSAEYALETAQQKAPGFLNQLNQLMASSKSLREGSSFVPSALVLGVHMLANFPHAEDPDALLMAMASVDKPPLDELYVNALPRYVDLPLYWDDKQFKELQGCEETRRAMQHGARFYSQVYQHLFG------------NNNEFINPEAFFWAISILMSRATSGQNQPFALIPFFDWFNH 224          
The following BLAST results are available for this feature:
BLAST of NO12G02910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ETM49577.11.000e-1225.48hypothetical protein L914_06201 [Phytophthora para... [more]
ETM49578.11.000e-1225.48hypothetical protein, variant [Phytophthora parasi... [more]
GBG27145.17.500e-825.17Histone-lysine N-methyltransferase setd3 [Aurantio... [more]
EFJ15360.11.700e-727.54hypothetical protein SELMODRAFT_445547 [Selaginell... [more]
EFJ24988.11.700e-727.54hypothetical protein SELMODRAFT_414219 [Selaginell... [more]
XP_024534535.11.700e-727.54N-lysine methyltransferase SETD6 [Selaginella moel... [more]
XP_024544320.11.700e-727.54N-lysine methyltransferase SETD6 [Selaginella moel... [more]
PTQ46222.13.700e-733.33hypothetical protein MARPO_0012s0150 [Marchantia p... [more]
XP_001692007.14.800e-732.20lysine N-methylase [Chlamydomonas reinhardtii][more]
KUF96955.14.800e-724.76ATP synthase subunit beta [Phytophthora nicotianae... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010236NSK010236Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02910.1NO12G02910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|631077gene_5463Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100162g14gene4768Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02910.1NO12G02910.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02910 ID=NO12G02910|Name=NO12G02910|organism=Nannochloropsis oceanica|type=gene|length=1326bp
ATGCTGCGCCGCGCCGCCCAGACCCTTGGTCCCGAGACGGCGCAACTGGT
AACTTGGGTGGAGAAGCAGGCACAGACAGCAGGAAGGATATGCGCACTCG
GTCCAAGACCCCCTTTACCCATCCTCACACCTTCAAATGGCTTGGGCCTC
GCGGCCCTCTCCCCTCAAGGCTACGCAGCAGGCGATGTAGTCTTGGCCCT
ACCTTTGACAGTCTGGGGACCAACTTCGGCACATTTTGCACTCCAAAATG
CTCAAGCGACAGCTCCAGCGTTCTATCAAACTTTAATTGCCATAGACGAG
GAGCTGGGTGGGGGCAAGCAGAAGCTTTTGCAGCCTGTGGCCTTGGCAAC
ACACCTCTCCCTCGCGTTGCTCGACCCTGACGATGCAGTTCACCCATACG
CCCGCTTTTTGTACGAGACAAGCCAGAAGGGTGTCCCACATCCGTTGTTG
CTCGACCCTCATGTTTTAAGGGAGGGGCTGCAGGCCAGTCCAGTGGTGGC
GGCGGTGAAGAAACGACAAGAGCTTTTCACATACGTACATCAACGCTTAT
TTGGCAGTGCTGCTACTGCTACTCCCGCTGAGACAATTCCGAATCAAGCG
TCATTTTTGCCTATTTCGATCTTTCTCTGGTCTCTTTCCCGGGTCTTATC
CCGTGGTGTTTCCGGTCCTGGTAAGCCGTTGACCTTCCTCCCGTTCTATG
ATTTGATGAATCACCGGCGCGCAGAGGCCAATTGCGAATACACCCTCGAT
ATCAATGAAGGCACTATTGAAGTCAAAGCCACGAGGACAATTGAAGGCGG
CGAGGAATTGTTTTTATGTTATAGTGATACCAAGGATAATCATCAGATGT
TTTTGACGTATGGTTTTGTGGACGAGGGAAACCCTGTAGGGATGACAATG
AGGGTGGGTTTGAATGAAAGTGAGGAAAGAGAGGAGGGAGGGGCAGATAT
AGAGTGGGTGATAGGCGGTGGCGCGGAAGAAGAAAAGAAGGAAAGGGCGA
GGTTTGAATGTGCTTTGGCTGCTGTCCGCGGGGGGAAGGGGGGGAGGGAC
GGGTTGTCAGAGGGAGAAGGAATGGGTGTGATGAAGGGGGCGGTTGTGCG
ACGTTTGCAACAGTACCAGACATCATTGGAGGAGGACAGGGCGACGTTGC
GGGAGATGGATGGAGAGAGGGAGTGTAAACATAAGAGCGAGGAAGGACAA
GCACAGGATTTGGTTTTGCGACGGACAACGCTCGCATTGCTGGTGGAGGA
GAAGACATGTTTGCAGCGAGCTTTGAAATGCTTGGCTAGAAGAGAAAGGG
AGGGTATTGGATTTGAACAAAGATAG
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protein sequence of NO12G02910.1

>NO12G02910.1-protein ID=NO12G02910.1-protein|Name=NO12G02910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=442bp
MLRRAAQTLGPETAQLVTWVEKQAQTAGRICALGPRPPLPILTPSNGLGL
AALSPQGYAAGDVVLALPLTVWGPTSAHFALQNAQATAPAFYQTLIAIDE
ELGGGKQKLLQPVALATHLSLALLDPDDAVHPYARFLYETSQKGVPHPLL
LDPHVLREGLQASPVVAAVKKRQELFTYVHQRLFGSAATATPAETIPNQA
SFLPISIFLWSLSRVLSRGVSGPGKPLTFLPFYDLMNHRRAEANCEYTLD
INEGTIEVKATRTIEGGEELFLCYSDTKDNHQMFLTYGFVDEGNPVGMTM
RVGLNESEEREEGGADIEWVIGGGAEEEKKERARFECALAAVRGGKGGRD
GLSEGEGMGVMKGAVVRRLQQYQTSLEEDRATLREMDGERECKHKSEEGQ
AQDLVLRRTTLALLVEEKTCLQRALKCLARREREGIGFEQR*
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Synonyms
Publications