NO12G02880, NO12G02880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G02880 vs. NCBI_GenBank
Match: XP_024584136.1 (mitochondrial carrier family [Plasmopara halstedii] >CEG47767.1 mitochondrial carrier family [Plasmopara halstedii]) HSP 1 Score: 198.4 bits (503), Expect = 3.600e-47 Identity = 118/278 (42.45%), Postives = 163/278 (58.63%), Query Frame = 0 Query: 29 GCVGGLVSLVAGQPFDTIKVRLQTSTKF-AGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQ--MTSPRSQGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQT--QQGPGPRVGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLGNV 302 G VGG+ +V GQPFDT+KVRLQT +KF GA DC RQ L +EG FKGM+SPV+ ++ NA++F+ Y E M M + +++++ S VF AG+V G Q+ L P EL+KCRLQ+Q S + +G + CIR ++K RG G F G TL R++P+F YF +YE TK ++ + G + S AGG+AG SW V YP DVIK+ +QT + A +L G +FF G+ A +RA P N + F YE + E L NV Sbjct: 17 GTVGGIAGVVVGQPFDTVKVRLQTYSKFYIGALDCARQTLKHEGVSGFFKGMTSPVVGSAATNAVMFAVY-ERMLKMIDDNPENATLKS------VFYAGAVGGFWQTVPLAPAELIKCRLQVQDGRRSNQYRGPMDCIRHIYKARGTPGLFLGFTCTLWREVPSFAVYFWIYEYTKRMMFNEGINSTTSMLTAGGVAGVASWVVSYPFDVIKSAIQTLPVHHKSGEHKIAYQARQLYRLGGWRIFFSGLGTACVRAFPCNAVTFYGYEKSSELLKNV 287
BLAST of NO12G02880 vs. NCBI_GenBank
Match: XP_017795859.1 (PREDICTED: LOW QUALITY PROTEIN: mitochondrial basic amino acids transporter-like [Habropoda laboriosa]) HSP 1 Score: 198.4 bits (503), Expect = 3.600e-47 Identity = 110/279 (39.43%), Postives = 158/279 (56.63%), Query Frame = 0 Query: 26 FIGGCVGGLVSLVAGQPFDTIKVRLQT----STKFAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQMTSPRSQGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPR-VGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLG 300 F GC+GG ++ G P DTIKV +QT + K+ G CFR +LA E L++GMSSPV ++VNAI+F Y E +++ DS+S+ S FVAG++ G QS + +P ELVK R+Q+Q ++ + G ++C++ +K G+RG F GLG T R+ P+FG YF YE + NG AGGLAG SW + YP+DV+K+ +Q G R G++ R + T G + +RG+S +LRA P N + F V WT LG Sbjct: 5 FFAGCLGGCAGIMVGYPLDTIKVHMQTQDYRNPKYKGNWHCFRTILAKESVAGLYRGMSSPVAGVAMVNAIIFGVYGE----IQRRIPDSTSLYSH------FVAGALTGIAQSPISSPIELVKMRMQLQTSTAQFSGPMECLKHTYKHEGYRGLFKGLGITFFREAPSFGIYFFTYEALTRTAD-NGPVSTPCMLLAGGLAGTASWVISYPLDVVKSRIQAN---GNRYAGVIDCLKRSVMTEGYSCLYRGLSSTILRAFPTNAVTFTVVAWTFRLLG 269
BLAST of NO12G02880 vs. NCBI_GenBank
Match: XP_008867980.1 (hypothetical protein H310_05120 [Aphanomyces invadans] >ETW03751.1 hypothetical protein H310_05120 [Aphanomyces invadans]) HSP 1 Score: 198.0 bits (502), Expect = 4.700e-47 Identity = 112/289 (38.75%), Postives = 170/289 (58.82%), Query Frame = 0 Query: 26 FIGGCVGGLVSLVAGQPFDTIKVRLQT-STKFAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQMTSPRS-----QGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEIT--------KDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPR--VGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFL 299 + GC+GG++ ++ GQPFDTIKVRLQT + +A C R L EG LFKG+ SP++ + +NA+VF + T+ ++ K D+ S+SS ++ AGS+AG +QS ++ PT+LVKC+LQ+Q R G ++CIR + + G RG F G+ PT+LRD ++G YF +YE T + L+SN S AGG AG +SWA++YP+DV+K+ +Q+ P+ + + + A L G +F +G+ +LRA PVN + F VYE T+ L Sbjct: 29 YAAGCLGGVMGIIVGQPFDTIKVRLQTHGSHYASPWHCARHTLQYEGVRGLFKGLVSPLVGSVPINAVVFGVHGSTLPILDK--TDTPSLSS------IYYAGSIAGFVQSFIVAPTDLVKCQLQVQDGFQRGGQRAFAGPIECIRHITAKHGARGMFQGVWPTVLRDTLSYGVYFYVYEATLRHLQSQRANGLKSNPTQDAASMLFAGGCAGVVSWAIIYPLDVVKSVIQSLPTTAPKSDLSLPRQAKLLYSVHGLRIFTKGLGTTMLRAFPVNAVTFYVYEMTMAAL 309
BLAST of NO12G02880 vs. NCBI_GenBank
Match: OQR85430.1 (Mitochondrial Carrier (MC) Family [Achlya hypogyna]) HSP 1 Score: 197.6 bits (501), Expect = 6.100e-47 Identity = 115/279 (41.22%), Postives = 157/279 (56.27%), Query Frame = 0 Query: 26 FIGGCVGGLVSLVAGQPFDTIKVRLQTSTKF-AGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQMTSPRSQ---GLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPRV--GMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFL 299 F GC+GG +V GQPFDTIKVRLQT F +G DC +EG FKG++SP+ + +AIVF +Y + ++K +++P VF AGS+AG LQS L PT+LVKC+LQ Q +++ G ++C++ ++ G RG F G PT+LRD +FG YF +YE K L + S AGG AG +SW +VYPIDV+K+ +QT G M RL++ G F +G+ LLRA PVN + F VYE TV L Sbjct: 19 FAAGCIGGGSGIVVGQPFDTIKVRLQTHGAFYSGPYDCTLHTWKHEGVRGFFKGLASPLFGSLWTSAIVFGAYGSALRFLEK----GQPPAAEPRLSSVFSAGSIAGLLQSIALCPTDLVKCQLQAQDGYTKARPFAGPLECVQHIYGRNGIRGLFLGFWPTILRDSYSFGVYFYVYEAMKRSLITKRVDDTTSMLVAGGAAGVISWGLVYPIDVVKSCIQTLPGDSTATEKSMRYQVQRLIKEQGYKPFTKGLGTTLLRAFPVNAVTFFVYEHTVLLL 293
BLAST of NO12G02880 vs. NCBI_GenBank
Match: XP_009529786.1 (hypothetical protein PHYSODRAFT_505429 [Phytophthora sojae] >EGZ16037.1 hypothetical protein PHYSODRAFT_505429 [Phytophthora sojae]) HSP 1 Score: 196.8 bits (499), Expect = 1.000e-46 Identity = 117/279 (41.94%), Postives = 159/279 (56.99%), Query Frame = 0 Query: 29 GCVGGLVSLVAGQPFDTIKVRLQTSTK-FAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQ--MTSPRSQGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPRVGMLK---TATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLGNV 302 G VGG+ +V GQPFDT+KVRLQT +K + GA DC RQ +EG F+GM+SP++ ++ NA++F+ Y T+ ++ PT VF AG+V G Q+ L P EL+KCRLQ+Q S + +G + CIR +FK RG G F G TL R++P+F YF LYE TK + G S S AGG+AG SW V YP DVIK+ +QT ++G K A +L G +FF G+ A +RA P N + F YE + E L N+ Sbjct: 17 GTVGGIAGVVVGQPFDTVKVRLQTYSKYYNGALDCTRQTWKHEGFQGFFRGMTSPLIGSAATNAVMFAVYERTLKMIDDN-------PQNPTLKSVFYAGAVGGFWQTVPLAPAELIKCRLQVQDGRRSSQYRGPMDCIRHIFKVRGTPGLFLGFTCTLWREVPSFAVYFWLYEYTKRKMIDGGISPTPSMLTAGGVAGVASWVVSYPFDVIKSAIQTLP-VNHKLGEHKIAYQARQLYRLGGWRIFFSGLGTACVRAFPCNAVTFYGYEKSSEMLKNM 287
BLAST of NO12G02880 vs. NCBI_GenBank
Match: CCI49491.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 196.8 bits (499), Expect = 1.000e-46 Identity = 109/277 (39.35%), Postives = 159/277 (57.40%), Query Frame = 0 Query: 27 IGGCVGGLVSLVAGQPFDTIKVRLQT-STKFAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQMTSPRS--QGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPR--VGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFL 299 + G G + GQPFDTIKVRLQT T + G DC +Q +EG FKG+SSP++ ++ NAIVFS Y + + + + P+ D VF+AG + G Q+ +TPT+L+KCRLQ+Q R+ +G + CIR V++ G RGF+ G T+LR+ P+FG YF YE TK + S+G + + AGGL+G SW + YP+DV+K+++QT R M+ L G +F RG+ A+LRA PVN + F YE + + + Sbjct: 12 VSGVTAGCAGVFVGQPFDTIKVRLQTHGTFYKGPIDCAKQTFKHEGIHGFFKGLSSPLIGSACTNAIVFSIYEKALKYLGTD-------EKHPSLDSVFIAGCLGGFCQTIAVTPTDLIKCRLQVQDGHQRNHYRGPIDCIRHVYQRNGSRGFYLGFNATILRETPSFGFYFYTYEKTKRAMVSHGFNDNTAMLCAGGLSGVGSWTLSYPLDVVKSSIQTLPIDATRKEKQMMYQVKSLYAKGGVRIFVRGLETAVLRAFPVNAVTFFCYEQSSQLM 281
BLAST of NO12G02880 vs. NCBI_GenBank
Match: XP_018405358.1 (PREDICTED: mitochondrial basic amino acids transporter-like [Cyphomyrmex costatus]) HSP 1 Score: 196.1 bits (497), Expect = 1.800e-46 Identity = 109/279 (39.07%), Postives = 152/279 (54.48%), Query Frame = 0 Query: 26 FIGGCVGGLVSLVAGQPFDTIKVRLQT----STKFAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQMTSPRS-QGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPRVGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLG 300 F GC+GG ++ G P DT+KV +QT + K+ G DCFR +LA E L+KGM+SP+ ++VNAIVF Y T ++S F+AG+ AG Q+ V +P EL K RLQ+Q TS + QG +QC+RD++++ G+RG F GLG T LR+ P++G YF YEI S + AGGLAG SW + YPIDVIK+ +Q + G L + + G + +RG++ +LRA P N F V WT G Sbjct: 7 FFAGCLGGCAGIMVGYPLDTVKVHMQTQDCRNPKYRGTWDCFRTILAKESVTGLYKGMTSPIAGVAVVNAIVFGVYGYT----------QRNLSEPDRLSSYFLAGASAGLAQTPVSSPLELAKTRLQLQSTSQGNFQGPMQCLRDIYRQHGYRGVFKGLGITFLREGPSYGVYFVTYEILTKTSSKQSISTF-HMLLAGGLAGTASWVISYPIDVIKSRIQAESS-NRYSGALDCLKKSVRVEGYSCLYRGLNSTILRAFPTNAATFAVVTWTFRLFG 273
BLAST of NO12G02880 vs. NCBI_GenBank
Match: XP_011500069.1 (PREDICTED: mitochondrial basic amino acids transporter [Ceratosolen solmsi marchali]) HSP 1 Score: 195.7 bits (496), Expect = 2.300e-46 Identity = 112/299 (37.46%), Postives = 163/299 (54.52%), Query Frame = 0 Query: 26 FIGGCVGGLVSLVAGQPFDTIKVRLQT----STKFAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQMTSP-----RSQGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSL--WLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPRVGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLGNVDTVHSTRRIVKP 314 F+ GC+GG +V G PFDT+KV +QT + K+ G CF+ LL + L++GMSSP+ +++N+IVF Y ++ L+K+ + S + F+ G+ AG Q+ V +P EL K RLQ+Q P R G VQC+R++ + +GFRG F+G G TLLR+ P++G YF+ YE L + R L W AGGLAG SW V YPIDV+K+ +Q G L + + T G RG++ ++RA P N + F V WT+ G ++ T VKP Sbjct: 5 FLAGCLGGCAGIVVGHPFDTVKVHIQTQDHRNPKYRGTWHCFKTLLVQDSMAGLYRGMSSPMAGVAVINSIVFGVYGQSQKLLKEGLPSAESNNHLVC---CFLTGAAAGIAQTPVSSPIELAKTRLQLQKAQPGVKQQRITGPVQCLREIHRAKGFRGVFSGFGVTLLREAPSYGIYFATYE----ALTGSQRLLPTW-QMLLAGGLAGTASWIVSYPIDVVKSRLQADT-EARYSGALDCLRKSVRTEGYGCLVRGLNSTIVRAFPTNAVTFAVVTWTMRLFGEDESREMTTSHVKP 294
BLAST of NO12G02880 vs. NCBI_GenBank
Match: XP_002908886.1 (Mitochondrial Carrier (MC) Family [Phytophthora infestans T30-4] >EEY57700.1 Mitochondrial Carrier (MC) Family [Phytophthora infestans T30-4]) HSP 1 Score: 194.5 bits (493), Expect = 5.200e-46 Identity = 115/279 (41.22%), Postives = 159/279 (56.99%), Query Frame = 0 Query: 29 GCVGGLVSLVAGQPFDTIKVRLQTSTK-FAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQ--MTSPRSQGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQT---QQGPGPRVGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLGNV 302 G VGG+ +V GQPFDT+KVRLQ+ +K + GA DC RQ +EG FKGM+SP++ ++ NA++F+ Y T+ ++ ++ T VF AG+V G Q+ L P EL+KCRLQ+Q S + QG + CIR + K RG G F G+ T+ R++P+F YF LYE TK + + + S AGG+AG SW V YP DVIKT +QT PG + A +L G VFF G+ A +RA P N + F YE + E L +V Sbjct: 17 GTVGGIAGVVVGQPFDTVKVRLQSYSKYYNGAFDCARQTWKHEGFSGFFKGMTSPMVGSAATNAVMFAVYERTLKMIDDNPENA-------TLKSVFYAGAVGGFWQTIPLAPAELIKCRLQVQDGRRSSQYQGPMDCIRHIIKARGTPGLFLGITCTMWREVPSFAVYFWLYEYTKRRMIDSNINSTTSMLTAGGVAGVASWVVSYPFDVIKTAIQTLPVNHKPGEH-KITYQARQLYRLGGWRVFFSGLGTACVRAFPSNAVTFFAYEKSSELLKDV 287
BLAST of NO12G02880 vs. NCBI_GenBank
Match: XP_012531447.1 (PREDICTED: mitochondrial basic amino acids transporter-like [Monomorium pharaonis]) HSP 1 Score: 194.5 bits (493), Expect = 5.200e-46 Identity = 107/279 (38.35%), Postives = 152/279 (54.48%), Query Frame = 0 Query: 26 FIGGCVGGLVSLVAGQPFDTIKVRLQT----STKFAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQMTSPRS-QGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPRVGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLG 300 F GC+GG +V G P DT+KV +QT + K+ G DC R + A E L+KGM+SP+ ++VNAIVF Y T ++S + F+AG+ AG Q+ V +P EL K RLQ+Q T + QG +QC+R++ ++ G+RG F GLG T LR+ P++G YF YE+ S L AGGLAG SW + YPIDVIK+ +Q + G G L + + + G + +RG++ +LRA P N F V WT+ G Sbjct: 7 FFAGCLGGCAGIVVGYPLDTVKVHMQTQDCRNPKYRGTWDCLRTIFAKESVSGLYKGMTSPIAGVAVVNAIVFGVYGYT----------QRNLSEPDRFSSYFLAGASAGLAQTPVSSPIELAKTRLQLQSTGQGNIQGPMQCLRNIHRQEGYRGVFKGLGITFLREAPSYGVYFVTYEMLTKTSSKQPIST-LHMLLAGGLAGTASWVISYPIDVIKSRIQAENG-NRYSGALDCLKKSIRSEGYSCLYRGLNSTILRAFPTNAATFAVVTWTIRLFG 273 The following BLAST results are available for this feature:
BLAST of NO12G02880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G02880 ID=NO12G02880|Name=NO12G02880|organism=Nannochloropsis oceanica|type=gene|length=999bpback to top protein sequence of NO12G02880.1 >NO12G02880.1-protein ID=NO12G02880.1-protein|Name=NO12G02880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=333bpback to top Synonyms
Publications
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