NO12G02880, NO12G02880 (gene) Nannochloropsis oceanica

Overview
NameNO12G02880
Unique NameNO12G02880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length999
Alignment locationchr12:799607..800605 -

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Properties
Property NameValue
DescriptionSolute carrier family 25 member 45
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:799607..800605 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
IPR002067Mit_carrier
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
BLAST of NO12G02880 vs. NCBI_GenBank
Match: XP_024584136.1 (mitochondrial carrier family [Plasmopara halstedii] >CEG47767.1 mitochondrial carrier family [Plasmopara halstedii])

HSP 1 Score: 198.4 bits (503), Expect = 3.600e-47
Identity = 118/278 (42.45%), Postives = 163/278 (58.63%), Query Frame = 0
Query:   29 GCVGGLVSLVAGQPFDTIKVRLQTSTKF-AGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQ--MTSPRSQGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQT--QQGPGPRVGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLGNV 302
            G VGG+  +V GQPFDT+KVRLQT +KF  GA DC RQ L +EG    FKGM+SPV+ ++  NA++F+ Y E M  M  +  +++++ S      VF AG+V G  Q+  L P EL+KCRLQ+Q    S + +G + CIR ++K RG  G F G   TL R++P+F  YF +YE TK ++ + G +   S   AGG+AG  SW V YP DVIK+ +QT           +   A +L    G  +FF G+  A +RA P N + F  YE + E L NV
Sbjct:   17 GTVGGIAGVVVGQPFDTVKVRLQTYSKFYIGALDCARQTLKHEGVSGFFKGMTSPVVGSAATNAVMFAVY-ERMLKMIDDNPENATLKS------VFYAGAVGGFWQTVPLAPAELIKCRLQVQDGRRSNQYRGPMDCIRHIYKARGTPGLFLGFTCTLWREVPSFAVYFWIYEYTKRMMFNEGINSTTSMLTAGGVAGVASWVVSYPFDVIKSAIQTLPVHHKSGEHKIAYQARQLYRLGGWRIFFSGLGTACVRAFPCNAVTFYGYEKSSELLKNV 287          
BLAST of NO12G02880 vs. NCBI_GenBank
Match: XP_017795859.1 (PREDICTED: LOW QUALITY PROTEIN: mitochondrial basic amino acids transporter-like [Habropoda laboriosa])

HSP 1 Score: 198.4 bits (503), Expect = 3.600e-47
Identity = 110/279 (39.43%), Postives = 158/279 (56.63%), Query Frame = 0
Query:   26 FIGGCVGGLVSLVAGQPFDTIKVRLQT----STKFAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQMTSPRSQGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPR-VGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLG 300
            F  GC+GG   ++ G P DTIKV +QT    + K+ G   CFR +LA E    L++GMSSPV   ++VNAI+F  Y E    +++   DS+S+ S       FVAG++ G  QS + +P ELVK R+Q+Q ++ +  G ++C++  +K  G+RG F GLG T  R+ P+FG YF  YE      + NG         AGGLAG  SW + YP+DV+K+ +Q     G R  G++    R + T G +  +RG+S  +LRA P N + F V  WT   LG
Sbjct:    5 FFAGCLGGCAGIMVGYPLDTIKVHMQTQDYRNPKYKGNWHCFRTILAKESVAGLYRGMSSPVAGVAMVNAIIFGVYGE----IQRRIPDSTSLYSH------FVAGALTGIAQSPISSPIELVKMRMQLQTSTAQFSGPMECLKHTYKHEGYRGLFKGLGITFFREAPSFGIYFFTYEALTRTAD-NGPVSTPCMLLAGGLAGTASWVISYPLDVVKSRIQAN---GNRYAGVIDCLKRSVMTEGYSCLYRGLSSTILRAFPTNAVTFTVVAWTFRLLG 269          
BLAST of NO12G02880 vs. NCBI_GenBank
Match: XP_008867980.1 (hypothetical protein H310_05120 [Aphanomyces invadans] >ETW03751.1 hypothetical protein H310_05120 [Aphanomyces invadans])

HSP 1 Score: 198.0 bits (502), Expect = 4.700e-47
Identity = 112/289 (38.75%), Postives = 170/289 (58.82%), Query Frame = 0
Query:   26 FIGGCVGGLVSLVAGQPFDTIKVRLQT-STKFAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQMTSPRS-----QGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEIT--------KDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPR--VGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFL 299
            +  GC+GG++ ++ GQPFDTIKVRLQT  + +A    C R  L  EG   LFKG+ SP++ +  +NA+VF  +  T+ ++ K   D+ S+SS      ++ AGS+AG +QS ++ PT+LVKC+LQ+Q    R       G ++CIR +  + G RG F G+ PT+LRD  ++G YF +YE T         + L+SN      S   AGG AG +SWA++YP+DV+K+ +Q+     P+  + + + A  L    G  +F +G+   +LRA PVN + F VYE T+  L
Sbjct:   29 YAAGCLGGVMGIIVGQPFDTIKVRLQTHGSHYASPWHCARHTLQYEGVRGLFKGLVSPLVGSVPINAVVFGVHGSTLPILDK--TDTPSLSS------IYYAGSIAGFVQSFIVAPTDLVKCQLQVQDGFQRGGQRAFAGPIECIRHITAKHGARGMFQGVWPTVLRDTLSYGVYFYVYEATLRHLQSQRANGLKSNPTQDAASMLFAGGCAGVVSWAIIYPLDVVKSVIQSLPTTAPKSDLSLPRQAKLLYSVHGLRIFTKGLGTTMLRAFPVNAVTFYVYEMTMAAL 309          
BLAST of NO12G02880 vs. NCBI_GenBank
Match: OQR85430.1 (Mitochondrial Carrier (MC) Family [Achlya hypogyna])

HSP 1 Score: 197.6 bits (501), Expect = 6.100e-47
Identity = 115/279 (41.22%), Postives = 157/279 (56.27%), Query Frame = 0
Query:   26 FIGGCVGGLVSLVAGQPFDTIKVRLQTSTKF-AGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQMTSPRSQ---GLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPRV--GMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFL 299
            F  GC+GG   +V GQPFDTIKVRLQT   F +G  DC      +EG    FKG++SP+  +   +AIVF +Y   +  ++K        +++P    VF AGS+AG LQS  L PT+LVKC+LQ Q    +++   G ++C++ ++   G RG F G  PT+LRD  +FG YF +YE  K  L +       S   AGG AG +SW +VYPIDV+K+ +QT  G        M     RL++  G   F +G+   LLRA PVN + F VYE TV  L
Sbjct:   19 FAAGCIGGGSGIVVGQPFDTIKVRLQTHGAFYSGPYDCTLHTWKHEGVRGFFKGLASPLFGSLWTSAIVFGAYGSALRFLEK----GQPPAAEPRLSSVFSAGSIAGLLQSIALCPTDLVKCQLQAQDGYTKARPFAGPLECVQHIYGRNGIRGLFLGFWPTILRDSYSFGVYFYVYEAMKRSLITKRVDDTTSMLVAGGAAGVISWGLVYPIDVVKSCIQTLPGDSTATEKSMRYQVQRLIKEQGYKPFTKGLGTTLLRAFPVNAVTFFVYEHTVLLL 293          
BLAST of NO12G02880 vs. NCBI_GenBank
Match: XP_009529786.1 (hypothetical protein PHYSODRAFT_505429 [Phytophthora sojae] >EGZ16037.1 hypothetical protein PHYSODRAFT_505429 [Phytophthora sojae])

HSP 1 Score: 196.8 bits (499), Expect = 1.000e-46
Identity = 117/279 (41.94%), Postives = 159/279 (56.99%), Query Frame = 0
Query:   29 GCVGGLVSLVAGQPFDTIKVRLQTSTK-FAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQ--MTSPRSQGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPRVGMLK---TATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLGNV 302
            G VGG+  +V GQPFDT+KVRLQT +K + GA DC RQ   +EG    F+GM+SP++ ++  NA++F+ Y  T+ ++             PT   VF AG+V G  Q+  L P EL+KCRLQ+Q    S + +G + CIR +FK RG  G F G   TL R++P+F  YF LYE TK  +   G S   S   AGG+AG  SW V YP DVIK+ +QT      ++G  K    A +L    G  +FF G+  A +RA P N + F  YE + E L N+
Sbjct:   17 GTVGGIAGVVVGQPFDTVKVRLQTYSKYYNGALDCTRQTWKHEGFQGFFRGMTSPLIGSAATNAVMFAVYERTLKMIDDN-------PQNPTLKSVFYAGAVGGFWQTVPLAPAELIKCRLQVQDGRRSSQYRGPMDCIRHIFKVRGTPGLFLGFTCTLWREVPSFAVYFWLYEYTKRKMIDGGISPTPSMLTAGGVAGVASWVVSYPFDVIKSAIQTLP-VNHKLGEHKIAYQARQLYRLGGWRIFFSGLGTACVRAFPCNAVTFYGYEKSSEMLKNM 287          
BLAST of NO12G02880 vs. NCBI_GenBank
Match: CCI49491.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 196.8 bits (499), Expect = 1.000e-46
Identity = 109/277 (39.35%), Postives = 159/277 (57.40%), Query Frame = 0
Query:   27 IGGCVGGLVSLVAGQPFDTIKVRLQT-STKFAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQMTSPRS--QGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPR--VGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFL 299
            + G   G   +  GQPFDTIKVRLQT  T + G  DC +Q   +EG    FKG+SSP++ ++  NAIVFS Y + +  +  +          P+ D VF+AG + G  Q+  +TPT+L+KCRLQ+Q    R+  +G + CIR V++  G RGF+ G   T+LR+ P+FG YF  YE TK  + S+G +   +   AGGL+G  SW + YP+DV+K+++QT      R    M+     L    G  +F RG+  A+LRA PVN + F  YE + + +
Sbjct:   12 VSGVTAGCAGVFVGQPFDTIKVRLQTHGTFYKGPIDCAKQTFKHEGIHGFFKGLSSPLIGSACTNAIVFSIYEKALKYLGTD-------EKHPSLDSVFIAGCLGGFCQTIAVTPTDLIKCRLQVQDGHQRNHYRGPIDCIRHVYQRNGSRGFYLGFNATILRETPSFGFYFYTYEKTKRAMVSHGFNDNTAMLCAGGLSGVGSWTLSYPLDVVKSSIQTLPIDATRKEKQMMYQVKSLYAKGGVRIFVRGLETAVLRAFPVNAVTFFCYEQSSQLM 281          
BLAST of NO12G02880 vs. NCBI_GenBank
Match: XP_018405358.1 (PREDICTED: mitochondrial basic amino acids transporter-like [Cyphomyrmex costatus])

HSP 1 Score: 196.1 bits (497), Expect = 1.800e-46
Identity = 109/279 (39.07%), Postives = 152/279 (54.48%), Query Frame = 0
Query:   26 FIGGCVGGLVSLVAGQPFDTIKVRLQT----STKFAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQMTSPRS-QGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPRVGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLG 300
            F  GC+GG   ++ G P DT+KV +QT    + K+ G  DCFR +LA E    L+KGM+SP+   ++VNAIVF  Y  T            ++S        F+AG+ AG  Q+ V +P EL K RLQ+Q TS  + QG +QC+RD++++ G+RG F GLG T LR+ P++G YF  YEI          S +     AGGLAG  SW + YPIDVIK+ +Q +       G L    + +   G +  +RG++  +LRA P N   F V  WT    G
Sbjct:    7 FFAGCLGGCAGIMVGYPLDTVKVHMQTQDCRNPKYRGTWDCFRTILAKESVTGLYKGMTSPIAGVAVVNAIVFGVYGYT----------QRNLSEPDRLSSYFLAGASAGLAQTPVSSPLELAKTRLQLQSTSQGNFQGPMQCLRDIYRQHGYRGVFKGLGITFLREGPSYGVYFVTYEILTKTSSKQSISTF-HMLLAGGLAGTASWVISYPIDVIKSRIQAESS-NRYSGALDCLKKSVRVEGYSCLYRGLNSTILRAFPTNAATFAVVTWTFRLFG 273          
BLAST of NO12G02880 vs. NCBI_GenBank
Match: XP_011500069.1 (PREDICTED: mitochondrial basic amino acids transporter [Ceratosolen solmsi marchali])

HSP 1 Score: 195.7 bits (496), Expect = 2.300e-46
Identity = 112/299 (37.46%), Postives = 163/299 (54.52%), Query Frame = 0
Query:   26 FIGGCVGGLVSLVAGQPFDTIKVRLQT----STKFAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQMTSP-----RSQGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSL--WLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPRVGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLGNVDTVHSTRRIVKP 314
            F+ GC+GG   +V G PFDT+KV +QT    + K+ G   CF+ LL  +    L++GMSSP+   +++N+IVF  Y ++  L+K+    + S +        F+ G+ AG  Q+ V +P EL K RLQ+Q   P     R  G VQC+R++ + +GFRG F+G G TLLR+ P++G YF+ YE     L  + R L  W     AGGLAG  SW V YPIDV+K+ +Q         G L    + + T G     RG++  ++RA P N + F V  WT+   G  ++   T   VKP
Sbjct:    5 FLAGCLGGCAGIVVGHPFDTVKVHIQTQDHRNPKYRGTWHCFKTLLVQDSMAGLYRGMSSPMAGVAVINSIVFGVYGQSQKLLKEGLPSAESNNHLVC---CFLTGAAAGIAQTPVSSPIELAKTRLQLQKAQPGVKQQRITGPVQCLREIHRAKGFRGVFSGFGVTLLREAPSYGIYFATYE----ALTGSQRLLPTW-QMLLAGGLAGTASWIVSYPIDVVKSRLQADT-EARYSGALDCLRKSVRTEGYGCLVRGLNSTIVRAFPTNAVTFAVVTWTMRLFGEDESREMTTSHVKP 294          
BLAST of NO12G02880 vs. NCBI_GenBank
Match: XP_002908886.1 (Mitochondrial Carrier (MC) Family [Phytophthora infestans T30-4] >EEY57700.1 Mitochondrial Carrier (MC) Family [Phytophthora infestans T30-4])

HSP 1 Score: 194.5 bits (493), Expect = 5.200e-46
Identity = 115/279 (41.22%), Postives = 159/279 (56.99%), Query Frame = 0
Query:   29 GCVGGLVSLVAGQPFDTIKVRLQTSTK-FAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQ--MTSPRSQGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQT---QQGPGPRVGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLGNV 302
            G VGG+  +V GQPFDT+KVRLQ+ +K + GA DC RQ   +EG    FKGM+SP++ ++  NA++F+ Y  T+ ++     ++       T   VF AG+V G  Q+  L P EL+KCRLQ+Q    S + QG + CIR + K RG  G F G+  T+ R++P+F  YF LYE TK  +  +  +   S   AGG+AG  SW V YP DVIKT +QT      PG    +   A +L    G  VFF G+  A +RA P N + F  YE + E L +V
Sbjct:   17 GTVGGIAGVVVGQPFDTVKVRLQSYSKYYNGAFDCARQTWKHEGFSGFFKGMTSPMVGSAATNAVMFAVYERTLKMIDDNPENA-------TLKSVFYAGAVGGFWQTIPLAPAELIKCRLQVQDGRRSSQYQGPMDCIRHIIKARGTPGLFLGITCTMWREVPSFAVYFWLYEYTKRRMIDSNINSTTSMLTAGGVAGVASWVVSYPFDVIKTAIQTLPVNHKPGEH-KITYQARQLYRLGGWRVFFSGLGTACVRAFPSNAVTFFAYEKSSELLKDV 287          
BLAST of NO12G02880 vs. NCBI_GenBank
Match: XP_012531447.1 (PREDICTED: mitochondrial basic amino acids transporter-like [Monomorium pharaonis])

HSP 1 Score: 194.5 bits (493), Expect = 5.200e-46
Identity = 107/279 (38.35%), Postives = 152/279 (54.48%), Query Frame = 0
Query:   26 FIGGCVGGLVSLVAGQPFDTIKVRLQT----STKFAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNETMTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQIQMTSPRS-QGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEITKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPRVGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLG 300
            F  GC+GG   +V G P DT+KV +QT    + K+ G  DC R + A E    L+KGM+SP+   ++VNAIVF  Y  T            ++S    +   F+AG+ AG  Q+ V +P EL K RLQ+Q T   + QG +QC+R++ ++ G+RG F GLG T LR+ P++G YF  YE+          S  L    AGGLAG  SW + YPIDVIK+ +Q + G     G L    + + + G +  +RG++  +LRA P N   F V  WT+   G
Sbjct:    7 FFAGCLGGCAGIVVGYPLDTVKVHMQTQDCRNPKYRGTWDCLRTIFAKESVSGLYKGMTSPIAGVAVVNAIVFGVYGYT----------QRNLSEPDRFSSYFLAGASAGLAQTPVSSPIELAKTRLQLQSTGQGNIQGPMQCLRNIHRQEGYRGVFKGLGITFLREAPSYGVYFVTYEMLTKTSSKQPIST-LHMLLAGGLAGTASWVISYPIDVIKSRIQAENG-NRYSGALDCLKKSIRSEGYSCLYRGLNSTILRAFPTNAATFAVVTWTIRLFG 273          
The following BLAST results are available for this feature:
BLAST of NO12G02880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_024584136.13.600e-4742.45mitochondrial carrier family [Plasmopara halstedii... [more]
XP_017795859.13.600e-4739.43PREDICTED: LOW QUALITY PROTEIN: mitochondrial basi... [more]
XP_008867980.14.700e-4738.75hypothetical protein H310_05120 [Aphanomyces invad... [more]
OQR85430.16.100e-4741.22Mitochondrial Carrier (MC) Family [Achlya hypogyna... [more]
XP_009529786.11.000e-4641.94hypothetical protein PHYSODRAFT_505429 [Phytophtho... [more]
CCI49491.11.000e-4639.35unnamed protein product [Albugo candida][more]
XP_018405358.11.800e-4639.07PREDICTED: mitochondrial basic amino acids transpo... [more]
XP_011500069.12.300e-4637.46PREDICTED: mitochondrial basic amino acids transpo... [more]
XP_002908886.15.200e-4641.22Mitochondrial Carrier (MC) Family [Phytophthora in... [more]
XP_012531447.15.200e-4638.35PREDICTED: mitochondrial basic amino acids transpo... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL127nonsL127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR009ngnoR009Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010216NSK010216Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02880.1NO12G02880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|543153gene_5460Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100168g3gene4754Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02880.1NO12G02880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02880 ID=NO12G02880|Name=NO12G02880|organism=Nannochloropsis oceanica|type=gene|length=999bp
ATGGACGAGCTCGCTGCGCAGGAGCTCGAGATCCATGAGAATACGGCAGG
GAACATTGTCCCGACTTTGCACTCGTTTATTGGTGGATGCGTAGGTGGCC
TAGTCTCGCTTGTCGCTGGACAGCCGTTTGACACAATCAAGGTCCGCCTT
CAAACTTCAACGAAATTCGCCGGCGCCGGGGACTGTTTTCGGCAGCTGCT
TGCCAACGAAGGCCCTTTGGCACTGTTCAAAGGCATGTCCTCGCCTGTTC
TCTCCGCTTCCCTCGTGAACGCCATCGTTTTCTCCTCCTACAACGAAACC
ATGACCCTCATGAAAAAAGAAGCGGCGGACTCCAGCAGCATCAGCAGCAA
ACCCACCTACGACCAAGTCTTTGTCGCTGGCTCCGTGGCTGGCGGGCTGC
AGTCCTCAGTTCTCACCCCCACAGAGCTGGTCAAATGCCGCTTGCAGATA
CAGATGACTTCTCCCCGATCTCAGGGCTTGGTGCAATGTATTCGGGACGT
CTTTAAGGAAAGGGGTTTCCGGGGTTTTTTCGCGGGATTAGGCCCTACTT
TGCTGCGGGATTTGCCGGCGTTCGGCTGTTATTTCTCACTGTATGAAATC
ACAAAGGACGTGTTGGAGAGCAATGGGCGATCGTTGTGGTTGAGTTCATG
TGCGGCGGGGGGATTGGCCGGGTGCCTGTCGTGGGCCGTGGTCTACCCGA
TCGACGTCATAAAAACCACCATGCAGACACAACAAGGGCCAGGGCCTCGG
GTGGGCATGCTCAAGACAGCGACGAGGCTCCTCGAGACAACGGGGCCGGC
AGTATTTTTCAGGGGTATGTCGGTGGCGCTTCTGAGGGCACTGCCGGTAA
ATTGTATTGTCTTTCCCGTGTACGAATGGACGGTGGAGTTTTTGGGAAAT
GTGGATACGGTGCATAGCACTAGAAGGATTGTCAAGCCGCCGGCACCGGA
GAGCAGCGGCGGCAATAGTAATAGTAATAGCGGAATTCCAGCGACCTGA
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protein sequence of NO12G02880.1

>NO12G02880.1-protein ID=NO12G02880.1-protein|Name=NO12G02880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=333bp
MDELAAQELEIHENTAGNIVPTLHSFIGGCVGGLVSLVAGQPFDTIKVRL
QTSTKFAGAGDCFRQLLANEGPLALFKGMSSPVLSASLVNAIVFSSYNET
MTLMKKEAADSSSISSKPTYDQVFVAGSVAGGLQSSVLTPTELVKCRLQI
QMTSPRSQGLVQCIRDVFKERGFRGFFAGLGPTLLRDLPAFGCYFSLYEI
TKDVLESNGRSLWLSSCAAGGLAGCLSWAVVYPIDVIKTTMQTQQGPGPR
VGMLKTATRLLETTGPAVFFRGMSVALLRALPVNCIVFPVYEWTVEFLGN
VDTVHSTRRIVKPPAPESSGGNSNSNSGIPAT*
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