NO12G02290, NO12G02290 (gene) Nannochloropsis oceanica

Overview
NameNO12G02290
Unique NameNO12G02290
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1307
Alignment locationchr12:652531..653837 -

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Properties
Property NameValue
DescriptionNTP pyrophosphohydrolase MazG, putative catalytic core
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:652531..653837 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004518MazG_cat
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO12G02290 vs. NCBI_GenBank
Match: EWM25804.1 (NTP pyrophosphohydrolase MazG, putative catalytic core [Nannochloropsis gaditana])

HSP 1 Score: 271.2 bits (692), Expect = 4.300e-69
Identity = 141/249 (56.63%), Postives = 180/249 (72.29%), Query Frame = 0
Query:   17 TLELFRQSVSCSFPPVSPISIPLLCLDVAQKTGLLAEVLQWKNEDI--CLENDENLRKKVQVTAGGLLVSVLRFSEECEIDLGAAAVAKIDLNGRKYPATLVKGQAHKYDHYSSQTGIKKQGQSIGESLSIFKSPPWEC-IRISRLQAILREFVAEREWGKYHAPRNLLLALVGEMGELCEIVK-TMSGPPASWPRAAKDELAQEVADVFIYLLRFGDVCNIDFREGLVETVAAEAARQIASRKQEKGD 262
            ++E  RQ+V  +   +S I I  LCLDVA K GLLAE+LQWK+E++   + +D     K+Q+ AG LLVS+LR S   EIDLGAAAVAKIDLN RKYPA   KG AHKYD+Y++QTGIKK+GQS+G    IF+ PPW+  + IS LQ  L+ FV ER W KYH PRNLLLAL+GE+GELCEIV+ T +G   SWP+A K+EL QE+ADVFIYLLRF DVC +D  +G+   +A+ A +Q+AS++    D
Sbjct:   13 SIEFLRQAVQDTL-KLSIIPITGLCLDVAHKAGLLAEILQWKSEEVTALVYDDIEFCHKMQIAAGELLVSILRLSAHSEIDLGAAAVAKIDLNARKYPAQFCKGLAHKYDYYTAQTGIKKEGQSLGPEDQIFRPPPWDARLTISDLQTSLQAFVLERNWEKYHTPRNLLLALIGEVGELCEIVQATPAGDSRSWPQAFKNELGQEIADVFIYLLRFADVCRLDLAKGMEIAIASGADKQLASKRHVIAD 260          
BLAST of NO12G02290 vs. NCBI_GenBank
Match: XP_002291964.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90815.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 120.2 bits (300), Expect = 1.200e-23
Identity = 69/218 (31.65%), Postives = 107/218 (49.08%), Query Frame = 0
Query:   70 LRKKVQVTAGGLLVSVLRFSEECEIDLGAAAVAKIDLNGRKYPATLVKGQAHKYDHYSSQTGI-KKQGQS-----------IGESLSIFKSPPWECIRISRLQAILREFVAEREWGKYHAPRNLLLALVGEMGELCEI-----------------VKTMSGPP---------ASWPRAAKDELAQEVADVFIYLLRFGDVCNIDFREGLVETVAAEAA 250
            LR +V    G + + +      C+IDL  + + K++LNGRKYP  L KG++ KY +YSSQTGI K +GQS           +  S +       +   +  +  ++R F  ER W ++H PRN++LAL+GE+GEL E+                  +++ G P           W     D++ QEVADV IYL+R  D+C++   +  V  +    A
Sbjct:   95 LRDEVATQLGMIFIQLFTICNVCDIDLCTSVLKKVELNGRKYPVELCKGKSGKYTNYSSQTGITKSEGQSTIDSPIKDNSDVDVSRNDEDGGEEDTTTVEGITFLIRHFANERLWNRFHTPRNIVLALLGEVGELAELFQWSGDVDKTDESNDNTAESVGGNPFAKQSGLMTIGWTEEEVDKVGQEVADVTIYLIRLADICHVSLAKNAVRLLEERGA 312          
BLAST of NO12G02290 vs. NCBI_GenBank
Match: GAX18074.1 (cyclic pyranopterin monophosphate synthase [Fistulifera solaris])

HSP 1 Score: 119.0 bits (297), Expect = 2.700e-23
Identity = 69/168 (41.07%), Postives = 94/168 (55.95%), Query Frame = 0
Query:   81 LLVSVLRFSEECEIDLGAAAVAKIDLNGRKYPATLVKGQAHKYDHYSSQTGI-KKQGQSIGESLSIFKSPPWECIRISRLQAILREFVAEREWGKYHAPRNLLLALVGEMGELCEIVKTMSGPPASWPRAAKDELAQEVADVFIYLLRFGDVCNIDFREGLVETVAAE 248
            LL  + R ++  +I L  A   KI LNGRKYP    KG+  KY  YS  TGI K  GQS  E  +++ +     + + +LQ+ +R+F A R+W  +H PRNL LAL GE+GEL E +  +            D+L QEVADV IYLLR  DVC +     L +T +A+
Sbjct:  462 LLQELQRVADSLQIHLAQAIRNKIRLNGRKYPVEQAKGKMSKYTEYSHTTGITKHDGQSTTEFPNVYTAQTTTIVELQQLQSEIRDFAAHRDWDPFHTPRNLCLALGGELGELVEQLFLLEA-------IQTDKLYQEVADVTIYLLRLADVCQLSL---LADTSSAD 619          
BLAST of NO12G02290 vs. NCBI_GenBank
Match: GAX23111.1 (cyclic pyranopterin monophosphate synthase [Fistulifera solaris])

HSP 1 Score: 115.5 bits (288), Expect = 3.000e-22
Identity = 66/155 (42.58%), Postives = 88/155 (56.77%), Query Frame = 0
Query:   81 LLVSVLRFSEECEIDLGAAAVAKIDLNGRKYPATLVKGQAHKYDHYSSQTGI-KKQGQSIGESLSIFKSPPWECIRISRLQAILREFVAEREWGKYHAPRNLLLALVGEMGELCEIVKTMSGPPASWPRAAKDELAQEVADVFIYLLRFGDVCNI 235
            LL  +   ++  +I L  A   KI LNGRKYP    KG+  KY  YS  TGI K  GQS  E  +++ +     + + +LQ+ +R+F A+R+W  +H PRNL LAL GE+GEL E +       A       D+L QEVADV IYLLR  DVC +
Sbjct:  468 LLQQLQLVADSLQIHLAQAIRNKIRLNGRKYPVEQAKGKMSKYTEYSHMTGITKHDGQSTTEFPNVYTAQTTTLVELQQLQSEIRDFAAQRDWDPFHTPRNLCLALGGELGELVEQLFFFDTLQA-------DKLYQEVADVTIYLLRLADVCQL 615          
BLAST of NO12G02290 vs. NCBI_GenBank
Match: CBJ31985.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 104.8 bits (260), Expect = 5.300e-19
Identity = 60/156 (38.46%), Postives = 82/156 (52.56%), Query Frame = 0
Query:   74 VQVTAGGLLVSVLRFSEECEIDLGAAAVAKIDLNGRKYPATLVKGQAHKYDHYSSQTGIKK-------QGQSIGESLSIFKSPPWECIRISRLQAILREFVAEREWGKYHAPRNLLLALVGEMGELCEIVK------TMSGPPASWPRAAKDELAQ 217
            V +  G     +L  +E+C +DLG +   KI LN +KYPA LV+G A KYD Y + TG  K       +G    + LS  K   W    +  L+  L+ F  ER W K+H PRN+ LAL+GE GEL E+ +         G PA W R  +D+L+Q
Sbjct:   44 VVLELGSAAGCLLLLAEQCNVDLGLSVDLKIKLNAKKYPAVLVRGSALKYDAYKTTTGFAKGSKQDMTEGDDGDDHLSGCKGRAWRPYSLQDLRLQLQNFCTERNWQKFHTPRNICLALMGETGELSELFQFKDEDTCCQGLPA-WSRDDRDKLSQ 198          
BLAST of NO12G02290 vs. NCBI_GenBank
Match: EJK47910.1 (hypothetical protein THAOC_33342, partial [Thalassiosira oceanica])

HSP 1 Score: 97.8 bits (242), Expect = 6.500e-17
Identity = 65/200 (32.50%), Postives = 95/200 (47.50%), Query Frame = 0
Query:   79 GGLLVSVLRFSEECEIDLGAAAVAKIDLNGRKYPATLVKGQAHKYDHYSSQTGIKKQGQSIGESLSIFKSPPWECIRISRLQAILREFVAEREWGKYHAPRNLLLALVGEMGELCEIVKTMSG-PPASWPRAAKDELAQEVADVFIYLLRFGDVCNI------DFREGLVETVAAEAARQIASRKQEKGDRETHSEQKKE 272
            G + +S+   +    I++      KI+LN RKYP  L KG+A KY  YS QTGI    Q    +         E I +     ++R F  ER+W ++H PRN+ LAL+GE+GEL E+ +        +     +D++ QE+AD  IYLLR  DV ++      D   G V     E    +  + Q +G R   S    E
Sbjct:  174 GRVFMSLFTIAANLSINMVDIINRKIELNARKYPVDLCKGKAGKYTKYSDQTGITATNQVTTPTKRKDSDETVEGITL-----LIRTFANERQWNRFHTPRNIALALIGEVGELAELFQWKGDVGELALSEEERDKIGQEIADCAIYLLRLADVSHVCLGQHHDRPGGQVGLHREEPPSLVVVKVQTRGRRPRKSSYAPE 368          
BLAST of NO12G02290 vs. NCBI_GenBank
Match: OAE20087.1 (hypothetical protein AXG93_544s1000 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 93.6 bits (231), Expect = 1.200e-15
Identity = 53/171 (30.99%), Postives = 88/171 (51.46%), Query Frame = 0
Query:   84 SVLRFSEECEIDLGAAAVAKIDLNG-RKYPATLVKGQAHKYDHYSSQTGIKKQGQSIGESLSIFKSPPWECIRISRLQAILREFVAEREWGKYHAPRNLLLALVGEMGELCEIVKTMSGPP---ASWPRAAKDELAQEVADVFIYLLRFGDVCNIDFREGLVETVAAEAAR 251
            +V R + EC I+L A+     + +  R + A  V+       H  ++ G KK+         ++ S     + I  LQ  + +F  ER+W ++H+PRNLLLALVGE+GEL EI +     P     W  + K+ L +E++DV +YL+R  D+C +D  +  +  +   A +
Sbjct:  268 AVARLTFECSIELSASEAFLPEASQVRTFVAVKVEDNE---SHNEAEVGFKKES-------DVYGSCAVGSVTIKELQKRMADFARERDWDQFHSPRNLLLALVGEVGELSEIFQWKGEVPRGLPGWNVSEKEHLGEELSDVLLYLVRLADICEVDLGQAALRKIKKNAKK 428          
BLAST of NO12G02290 vs. NCBI_GenBank
Match: XP_012939089.1 (PREDICTED: uncharacterized protein LOC101863442 [Aplysia californica])

HSP 1 Score: 92.8 bits (229), Expect = 2.100e-15
Identity = 75/301 (24.92%), Postives = 118/301 (39.20%), Query Frame = 0
Query:   42 LDVAQKTGLLAEVLQWKNE--DICLENDENLRKKVQVTAGGLLVSVLRFSEECEIDLGAAAVAKIDLNGRKYPATLVKGQAHKYDHYS----------------------------------------------------SQTGIKKQGQSI---------------------GESLSIFKSPPWECIRISRLQAILREFVAEREWGKYHAPRNLLLALVGEMGELCEIVKTMSGPPASWPRAAKDE---LAQEVADVFIYLLRFGDVCNIDFREGLVETVAAEAARQIASRKQEKGDRET 265
            LD+  + G LAE+ QWK E  +   E  E  RK V      +L+ ++  S  C IDL  A + KI    +KYP     G+ +KY  Y                                                     +   ++K G  +                     GE+ S       +   +  L+ +  EF+ ER W ++H+PRN+LLALVGE+GEL EI +         P   + E   + QE++DV +YLL     C+ID  + +++ +AA A +    R   + ++ T
Sbjct:   88 LDLVAEVGELAEIFQWKGEVKEGIPEMTEGERKHVGEELSDVLLCLIDLSHRCRIDLTKAVLDKISSIAKKYPKDKAYGRTNKYTDYQLSQNFSLFEKWGDYSYRVKDVFSYSDQAHKEYIVIMSNPTSPKRLKTETENRNTNDVEKTGVGVKADIVDNIDNTLSASAAADGGGETESSGSFRFSDSTSLEDLRKLSMEFIKERNWDQFHSPRNVLLALVGEVGELAEIFQWKGEVSEGLPELTEGEREHVGQELSDVLLYLLDLSQRCHIDLPKAVLKKMAANAKKYPKDRAYGRANKYT 388          
BLAST of NO12G02290 vs. NCBI_GenBank
Match: XP_020094600.1 (dCTP pyrophosphatase 1-like [Ananas comosus] >OAY65293.1 dCTP pyrophosphatase 1 [Ananas comosus])

HSP 1 Score: 91.7 bits (226), Expect = 4.700e-15
Identity = 42/105 (40.00%), Postives = 64/105 (60.95%), Query Frame = 0
Query:  154 IRISRLQAILREFVAEREWGKYHAPRNLLLALVGEMGELCEIV----KTMSGPPASWPRAAKDELAQEVADVFIYLLRFGDVCNIDFREGLVETVAAEAARQIAS 255
            + +  L  +L EF  ER+W KYH+PRNLLLA+VGE+GEL EI     +   G P +W  + K+ L +E++DV +YL+R  D+C+ID  +     +   A +  A+
Sbjct:   21 VSLKELSGMLEEFAKERDWEKYHSPRNLLLAMVGEVGELSEIFMWKGEVARGLP-NWKESEKEHLGEELSDVLLYLIRLADICDIDLADAATRKIEKNAVKYPAT 124          
BLAST of NO12G02290 vs. NCBI_GenBank
Match: OAY65296.1 (dCTP pyrophosphatase 1 [Ananas comosus])

HSP 1 Score: 90.9 bits (224), Expect = 8.000e-15
Identity = 42/105 (40.00%), Postives = 64/105 (60.95%), Query Frame = 0
Query:  154 IRISRLQAILREFVAEREWGKYHAPRNLLLALVGEMGELCEIV----KTMSGPPASWPRAAKDELAQEVADVFIYLLRFGDVCNIDFREGLVETVAAEAARQIAS 255
            + +  L  +L EF  ER+W KYH+PRNLLLA+VGE+GEL EI     +   G P +W  + K+ L +E++DV +YL+R  D+C+ID  +     +   A +  A+
Sbjct:   21 VSLKELSGMLEEFAKERDWEKYHSPRNLLLAMVGEVGELSEIFMWKGEVARGLP-NWKDSEKEHLGEELSDVLLYLIRLADICDIDLADAATRKIEKNAVKYPAT 124          
The following BLAST results are available for this feature:
BLAST of NO12G02290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25804.14.300e-6956.63NTP pyrophosphohydrolase MazG, putative catalytic ... [more]
XP_002291964.11.200e-2331.65predicted protein [Thalassiosira pseudonana CCMP13... [more]
GAX18074.12.700e-2341.07cyclic pyranopterin monophosphate synthase [Fistul... [more]
GAX23111.13.000e-2242.58cyclic pyranopterin monophosphate synthase [Fistul... [more]
CBJ31985.15.300e-1938.46conserved unknown protein [Ectocarpus siliculosus][more]
EJK47910.16.500e-1732.50hypothetical protein THAOC_33342, partial [Thalass... [more]
OAE20087.11.200e-1530.99hypothetical protein AXG93_544s1000 [Marchantia po... [more]
XP_012939089.12.100e-1524.92PREDICTED: uncharacterized protein LOC101863442 [A... [more]
XP_020094600.14.700e-1540.00dCTP pyrophosphatase 1-like [Ananas comosus] >OAY6... [more]
OAY65296.18.000e-1540.00dCTP pyrophosphatase 1 [Ananas comosus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010162NSK010162Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02290.1NO12G02290.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592386gene_5390Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100021g56gene4714Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02290.1NO12G02290.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02290 ID=NO12G02290|Name=NO12G02290|organism=Nannochloropsis oceanica|type=gene|length=1307bp
ATGGGACGATCACAGCCCAACAATGGTGACGACATTGGGATTAACGGTAC
CTTGGAGCTATTCCGTCAGTCCGTCTCTTGTAGCTTTCCCCCCGTTTCTC
CGATTTCTATCCCACTCCTGTGCCTTGACGTAGCCCAAAAGACGGGCTTG
CTGGCAGAAGTTTTGCAATGGAAGAACGAGGACATATGTTTGGAGAATGA
CGAGAATCTACGGAAGAAGGTGCAGGTGACCGCGGGGGGGCTGTTGGTGA
GTGTTCTAAGATTCTCGGAGGAATGCGAGATCGACCTCGGGGCAGCGGCG
GTAGCCAAGATCGATTTGAACGGCCGCAAgtaagtgtgaggaaagataag
ggtcacagtgcagaagtttctgagatgtgtatgcgagcacctttgtccga
gcaactatgtccgaagatcgcctgcacgtatgtccgaagatggcctgcac
ttgctttcccctcccagtgagcacagggtgtatgttctatttttatcact
tttaagaggaggaatgtggtgaaatgtggcttggcacatttttctaatga
ttcaactatggtgccctgatccacatcatttacggaattatcttctttac
tgctctccttttcatcacaccgtcttctcccccgcctccccttttttctc
agGTACCCCGCTACTCTCGTGAAGGGTCAGGCGCACAAGTATGACCATTA
CAGTTCCCAAACAGGCATCAAAAAGCAGGGCCAGAGTATTGGCGAGTCTC
TTTCAATTTTCAAGTCTCCTCCCTGGGAGTGTATCAGGATAAGCAGGCTC
CAGGCCATCTTACGAGAATTCGTGGCAGAGCGAGAATGGGGCAAGTACCA
CGCGCCTCGCAATCTGTTGCTGGCCTTGGTAGGAGAGATGGGTGAACTTT
GCGAGATTGTGAAGACCATGAGTGGTCCACCGGCTTCATGGCCTCGGGCT
GCCAAGGATGAGTTGGCCCAAGAGGTGGCGGATGTTTTTATTTATCTACT
GCGATTCGGGGACGTGTGCAATATCGACTTTAGGGAAGGCTTGGTAGAAA
CCGTCGCTGCCGAGGCCGCCCGACAAATTGCTTCGAGGAAGCAGGAAAAG
GGAGACAGGGAGACGCATAGTGAGCAAAAGAAAGAGAGGTGGTGGTTCGC
TTCTTCCACTTGGGTAGTGAGTGGCATGCGATGGCGGATGAGGAGGCCGT
GGAGGGAGGGAGAAAAGGTTTCTGAGGTCGCCGTGGAGCTTGTGCTGTCG
CTACTCGCTGCTGCCACCGCCGCGTGTGTGGGCGCAGCTATATTGAAGAA
GCGATAG
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protein sequence of NO12G02290.1

>NO12G02290.1-protein ID=NO12G02290.1-protein|Name=NO12G02290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=328bp
MGRSQPNNGDDIGINGTLELFRQSVSCSFPPVSPISIPLLCLDVAQKTGL
LAEVLQWKNEDICLENDENLRKKVQVTAGGLLVSVLRFSEECEIDLGAAA
VAKIDLNGRKYPATLVKGQAHKYDHYSSQTGIKKQGQSIGESLSIFKSPP
WECIRISRLQAILREFVAEREWGKYHAPRNLLLALVGEMGELCEIVKTMS
GPPASWPRAAKDELAQEVADVFIYLLRFGDVCNIDFREGLVETVAAEAAR
QIASRKQEKGDRETHSEQKKERWWFASSTWVVSGMRWRMRRPWREGEKVS
EVAVELVLSLLAAATAACVGAAILKKR*
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Synonyms
Publications