NO12G02250, NO12G02250 (gene) Nannochloropsis oceanica

Overview
NameNO12G02250
Unique NameNO12G02250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2691
Alignment locationchr12:640231..642921 +

Link to JBrowse

Properties
Property NameValue
DescriptionGlycoside hydrolase family 8
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:640231..642921 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR0089286-hairpin_glycosidase-like
IPR002037Glyco_hydro_8
Homology
BLAST of NO12G02250 vs. NCBI_GenBank
Match: XP_005856116.1 (glycoside hydrolase family 8 [Nannochloropsis gaditana CCMP526] >EKU20252.1 glycoside hydrolase family 8 [Nannochloropsis gaditana CCMP526] >EWM25803.1 glycoside hydrolase family 8 [Nannochloropsis gaditana])

HSP 1 Score: 809.7 bits (2090), Expect = 8.000e-231
Identity = 447/793 (56.37%), Postives = 537/793 (67.72%), Query Frame = 0
Query:    1 MFWRSHQNQPSPLPPPQAGD--SEDGYDQYVWEEEGEEAKSGLQAVRFTVS---TSAGGASSERYEYNXXXXXXXXLGGARPTGSPRLSGLFSRFGHQDGSQLLLGGSRKSLTKINHKNSRGSMTGEASTGSLVSGGGASTSIHLKSLTPSGSSRTTARGSPTHPSNLGRSGTLRARSPQTTTLLRTDAVFSDSRQRLDQLDGGSGISGSSQNLRRSGSMPVRLGVHPSSRPSNAXXXXXXXXXXXXGERVRQSMLRGGGMMLDEDTGMWNSVSFGGTKGLMKSDGSKVMVGIDPLHQR---PSFQDMGQF-------EKETEERGAANAAGVLVSIGYALVMPAVSVLKRTRRFVRANQIRVLSSLVILVILTLCIILAAVYFPSHTGKH-HIRGDPWDNKPFIAPHGHSGTMLGAAEGGQYRNLFSEMLHKSEAEIDKKLGDTWRLLFEGNPINEAIYFPVGTTPEGDKLGYMTNTESGWVTSEAMSYGMMAAVQFEKKEVFDALWAWSTRYMKHITGKYKDFFAWQCSLAGQKMDPTPAPDGEEWFATALIFAHNRWSSTGRYNYEKDALNLLAAMADPQRGMFSEKGEVTLNPVQPTITNPSYHLPQFYEVWARFLTDRGQVKEAAFYLMAASKSRILWRKAANRHTGLAADYTDFDGVGVKDLSGHSNFQWDAWRVVANLAVDWSWWRRDPWQEREADTLQAFLFSKGIHDYPSTYSLNGTAMSESHSVGLVAVNAVASLAATDKNVATAFVAELWNAAIPANKWRYYNGILAFLSLLQVSGRYRSYY 778
            MFWRS                  +DGYDQYVWEE+ EE +S + AVRF  S    S G       ++             RP+GSP  S LF+RFGH++GSQ LL GSR+SL KI+ KNSR SM  E+S GSL S G               S R ++RG                                            S  S     ++RSGS+P RLG   SS+PS+A             +R+R     G G  +DE TG W +VS GGTK LM+ DGS+VM+GI     R   PS  D+G F       E+E EE  A NA   LV+ GY LVMPA+S+   + R +R+  +RVLSS+++L  L LC+ILAAV+ P    K  ++RG+P    P   P GH G MLGAAEGG YRNLF+EMLHKS+AE++KKL DTWR LFEG+   EAIY PVG TPEGDKLGY+ NTESGWVTSEAMSYGMM AVQ++++E FDALW+W++RYM+H+TG+YK FFAW+CSLAG+K+D TPAPD EEW ATALIFA+NRW S GRY+YEK+A+ LL  M DP+RGMF++ GEVTLNPV+P ITNPSYHLP FYEVWARFL DRGQ + A+FYL AA +SR L  KA ++HTGL+ADYTD++GVGVKDL+GHSNFQWDAWRVVAN+AVDWSWWRRD WQ+READTLQAFL  +GI DYPSTY+LNGTA+ +SHSVGLVAVNAVASLAATD+NVA+AFVAELWNAAIP N+WRYYNG+L FLSLLQVSGRYRS Y
Sbjct:    1 MFWRSXXXXXXXXXXXXXXQHVGDDGYDQYVWEED-EETRSIVNAVRFNESPEMESIGSEDGIGEDHEGLDDEEGRESHRRPSGSP-FSFLFNRFGHEEGSQQLLSGSRRSLQKIHPKNSRNSMKAESSGGSLASMG--------------ASPRPSSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPS--SEGFAPVQRSGSVPGRLG-DTSSKPSHA-----AIAAAHQADRMRGRAWEGSGTRVDEMTGAWQAVSMGGTKRLMRGDGSQVMIGIGSGESRSHLPSLNDVGHFKEDLEGGEEEDEEGSAVNA---LVTFGYYLVMPALSLFHCSHRILRSYPVRVLSSVILLAGLALCVILAAVHLPIRLNKQKNVRGEPLTFSP---PEGHIGPMLGAAEGGLYRNLFAEMLHKSDAEVEKKLQDTWRFLFEGDVSTEAIYVPVGETPEGDKLGYVLNTESGWVTSEAMSYGMMVAVQYDRRETFDALWSWASRYMRHVTGRYKGFFAWKCSLAGRKLDGTPAPDAEEWIATALIFANNRWMSQGRYDYEKEAVALLLGMGDPRRGMFTKHGEVTLNPVRPVITNPSYHLPHFYEVWARFLNDRGQYQLASFYLQAAERSRRLLHKAVDQHTGLSADYTDYEGVGVKDLAGHSNFQWDAWRVVANVAVDWSWWRRDAWQQREADTLQAFLIRQGIQDYPSTYALNGTALLKSHSVGLVAVNAVASLAATDRNVASAFVAELWNAAIPRNQWRYYNGMLVFLSLLQVSGRYRSLY 763          
BLAST of NO12G02250 vs. NCBI_GenBank
Match: WP_026073703.1 (glycoside hydrolase [Acetivibrio cellulolyticus])

HSP 1 Score: 339.7 bits (870), Expect = 2.300e-89
Identity = 196/433 (45.27%), Postives = 274/433 (63.28%), Query Frame = 0
Query:  354 ILVILTLCIILAAVYFPSHTGKHHIRGDPWDNKPFIAPHGHSGTMLGAAEGGQYRNLFSEMLHKSEAEIDKKLGDTWRLLFEGNPINEAIYFPVGTTPEGDKLGYMTNTESGWVTSEAMSYGMMAAVQFEKKEVFDALWAWSTRYMKHITGKYKDFFAWQCSLAGQKMDPTPAPDGEEWFATALIFAHNRW-SSTGRYNYEKDALNLLAAM---ADPQRG--MFSE-KGEVTLNPVQ--PTITNPSYHLPQFYEVWARFLTDRGQVKEAAFYLMAASKSRILWRKAANRHTGLAADYTDFDGVGVKDL---SGHSNFQWDAWRVVANLAVDWSWWRRDPWQEREADTLQAFLFSKGIHDYPSTYSLNGTAMSESHSVGLVAVNAVASLAATDKNVATAFVAELWNAAIPANKWRYYNGILAFLSLLQVSGRYR 775
            IL +LT+ ++L A+ FP   GK+ ++               SG   GA E   YRNLF+E + KS++EID KL   +  +F G+   + +++PVGT    DK  Y+ +     V SE MSYGMM  VQ +KK+ FD LW W+  YM H  G++K FFAWQCS +G KMD TPA DGEE+FAT+L+FA NRW   TG YNY  +A  LL AM   +D   G  MF++ + +V   P       ++PSYHLP FYE+WA +    G+ K+ +F+  AAS SR  ++KA N  TGLA DY +FDG   KD+   SGH++F++DAWRV +N+AVD++WW +D WQ   AD +Q F + +GI  Y + ++++G+ +S  HS GLVA+NAVASLA+T+K  +  FV ELW  +IP+ KWRYY+G+L  + LL  SG ++
Sbjct:    5 ILYLLTISLVLTALSFP--IGKNSVK-------------AASG---GAYETNTYRNLFAE-IGKSQSEIDAKLQKAFDQMFYGDDSTQRLFYPVGT----DK-AYIMDVGDNDVRSEGMSYGMMICVQMDKKKEFDMLWKWAKEYMYHADGQFKGFFAWQCSTSGSKMDNTPASDGEEYFATSLLFASNRWGDGTGIYNYSAEAKALLDAMLHQSDDGVGVNMFNKTEKKVVFCPTSGADAFSDPSYHLPAFYELWALW----GE-KDNSFWSDAASASRQFFQKATNSTTGLAPDYANFDG-SPKDVSWSSGHADFRFDAWRVASNIAVDYAWWGKDSWQVTFADRIQGFFYKEGISSYGNQFTVSGSKLSSDHSPGLVAMNAVASLASTNK--SNEFVEELWKVSIPSGKWRYYDGMLYMMGLLHCSGNFK 405          
BLAST of NO12G02250 vs. NCBI_GenBank
Match: EWM28560.1 (glycoside hydrolase family 8 [Nannochloropsis gaditana])

HSP 1 Score: 336.3 bits (861), Expect = 2.600e-88
Identity = 174/387 (44.96%), Postives = 236/387 (60.98%), Query Frame = 0
Query:  400 GAAEGGQYRNLFSEMLHKSEAEIDKKLGDTWRLLFEGNPINEAIYFPVGTTPEGDKLGYMTNTESGWVTSEAMSYGMMAAVQFEKKEVFDALWAWSTRYMKHITGKYKDFFAWQCSLAG---QKMDPTPAPDGEEWFATALIFAHNRWSSTGRYNYEKDALNLLAAMADPQRGMFSEKGEVTLNPVQ--PTITNPSYHLPQFYEVWARFLTDRGQVKEAAFYLMAASKSRILWRKAANRHTGLAADYTDFDGVGVKD--LSGHSNFQWDAWRVVANLAVDWSWWRRDPWQEREADTLQAFLFSKGIHDYPSTYSLNGTAMSES--HSVGLVAVNAVASLAATDKNVATAFVAELWNAAIPANKWRYYNGILAFLSLLQVSGRYRSYY 778
            GAA  G YRNLF+E++ K+ AE D K+ + +  LF G+P  EA+Y  V        +  + NTES  VTSE +SYGM+  V  +++E F+ LW W+  +M+H  G +  FFAW+ +  G      D  PAPD E + A ALI AH +W ST  Y Y+ +AL LL  M   QRG FS  G+ T NP     T +NPSYHLP FYE +ARF+ + G+ + + F+  AA KSR  +  A+N+ TGL  DYT  DG    D  L GH+NFQWDAWR  AN+AVDW+WW  D WQ + AD + AF  S+G  +Y S Y+ +G     +  H  GLVA+NAV  LAA D+ +  +FV ELW+  IP+ K RYY  +L  +SLL  SG++++Y+
Sbjct:  355 GAAVTGVYRNLFTELMAKTPAESDVKVQEAYAHLFHGDPETEALYVEV-----EPNMAQIINTESDMVTSEGISYGMITCVHMDEQEPFNRLWNWARFHMQHTAGTFASFFAWRVTKGGLLVDAKDVIPAPDAEAYIAMALITAHRKWGSTPAYPYKAEALRLLRVMGQWQRGFFSRDGKATFNPTDWGSTHSNPSYHLPHFYEAFARFMANEGESRASGFWSGAARKSRFYFHVASNKKTGLMPDYTTLDGKPAPDPNLGGHTNFQWDAWRAPANVAVDWAWWNADGWQPKFADRILAFFASQG-PEYASQYTTDGQVADNNTGHDPGLVAMNAVVVLAARDQALKPSFVRELWDLPIPSGKGRYYPAMLYMMSLLHCSGKFKAYF 735          
BLAST of NO12G02250 vs. NCBI_GenBank
Match: PKO19013.1 (glycoside hydrolase [Chloroflexi bacterium HGW-Chloroflexi-10])

HSP 1 Score: 317.0 bits (811), Expect = 1.600e-82
Identity = 170/391 (43.48%), Postives = 237/391 (60.61%), Query Frame = 0
Query:  400 GAAEGGQYRNLFSEMLHKSEAEIDKKLGDTWRLLFEGNPINEAIYFPVGTTPEGDKLGYMTNTESGWVTSEAMSYGMMAAVQFEKKEVFDALWAWSTRYMKHITGKYKDFFAWQCSLAGQKMDPTPAPDGEEWFATALIFAHNRW-SSTGRYNYEKDALNLLAAM-------ADPQRGMFS-EKGEVTLNPV---QPTITNPSYHLPQFYEVWARFLTDRGQVKEAAFYLMAASKSRILWRKAANRHTGLAADYTDFDGV--GVKDLSGHSNFQWDAWRVVANLAVDWSWWRRDPWQEREADTLQAFLFSKGIHDYPSTYSLNGTAMSESHSVGLVAVNAVASLAATDKNVATAFVAELWNAAIPANKWRYYNGILAFLSLLQVSGRYRSY 777
            GA   G YRNLF+E L K++AEI  KL   W  LF G+  NE +Y+     P G+ +GYM +  +G V SE MSYGMM AVQ +K E FD LW W+   M    G Y+ +FAW C+  G++++  PA DGEEWF  AL+FA  RW +  G ++Y+ +A  +L  M       +D    MF+ E  +V   P      + T+PSYHLP +YE+WAR+       ++  F+  AA  SR  ++KAA+  TGL  DY +FDG   G  D   H +F++DAWR ++N+A+D +W+  DPWQ  +++ +  FL S+GI  Y + Y+L+GTA+S  HS GLVA+ A A+LAA D      FV ELW+  IP+ KWRYY+G+L  L  +QVSG +R Y
Sbjct:   54 GAYNTGVYRNLFNEYLGKTDAEIKSKLETAWNQLFYGDDDNERVYY-----PSGEDMGYMVDIGNGDVRSEGMSYGMMIAVQLDKHEEFDRLWKWTKTNMYQSDGAYQGYFAWHCTTDGKQLEANPASDGEEWFVMALLFASARWGNGEGIFDYQAEAQEILNTMLHKEETKSDLATNMFNWEHKQVVFVPAIGRVSSFTDPSYHLPAYYELWARWAE-----QDNDFWFEAAQTSRDYFKKAAHPVTGLMPDYANFDGTPYGTDD---HKDFRFDAWRTLSNVALDHAWFAADPWQVEQSNRVLDFLASEGISSYANQYTLDGTALSSEHSTGLVAMAAAAALAA-DPEKGKPFVQELWDTQIPSGKWRYYDGLLYMLGFMQVSGNFRIY 430          
BLAST of NO12G02250 vs. NCBI_GenBank
Match: WP_010076216.1 (glycoside hydrolase [Clostridium cellulovorans] >ADL50930.1 glycoside hydrolase family 8 [Clostridium cellulovorans 743B])

HSP 1 Score: 312.4 bits (799), Expect = 4.000e-81
Identity = 165/386 (42.75%), Postives = 240/386 (62.18%), Query Frame = 0
Query:  400 GAAEGGQYRNLFSEMLHKSEAEIDKKLGDTWRLLFEGNPINEAIYFPVGTTPEGDKLGYMTNTESGWVTSEAMSYGMMAAVQFEKKEVFDALWAWSTRYMKHITGKYKDFFAWQCSLAGQKMDPTPAPDGEEWFATALIFAHNRW-SSTGRYNYEKDALNLLAAM---ADPQRGM---FSEKGEVTLNPVQ--PTITNPSYHLPQFYEVWARFLTDRGQVKEAAFYLMAASKSRILWRKAANRHTGLAADYTDFDG--VGVKDLSGHSNFQWDAWRVVANLAVDWSWWRRDPWQEREADTLQAFLFSKGIHDYPSTYSLNGTAMSESHSVGLVAVNAVASLAATDKNVATAFVAELWNAAIPANKWRYYNGILAFLSLLQVSGRYR 775
            GA     YRNLF E   K++A++D+K+   +   F GN  ++ IY+PVGT      +GY+ +  +  V +EAMSYGMM AVQ +KK+ FD +W W+  YM H  G++K +FAWQC   G+ +D TPAPDGEE+F  +L+FA NRW + +G +NY+ +A  ++ AM   AD   G+    S   ++   P+    T T+PSYHLP FY++WA +       K+   +   A  SR  ++K  +  TGL+ +Y +FDG    V  +SG  N+ +DAWR +AN +VD++WW +DPWQ+  A+ LQ F +S+G+  Y   Y+++GT +   HSVG+VA+NAV SLAAT+ + AT FV ELWN   P   WRY+NG L  L LL+ SG ++
Sbjct:   32 GAYYTNTYRNLFVES-GKTQAQVDEKINKMFNQYFYGND-DQRIYYPVGT-----DMGYIKDIGNNDVRTEAMSYGMMIAVQLDKKDEFDRIWKWARTYMYHPDGQFKGYFAWQCDTNGKILDNTPAPDGEEYFVMSLLFAANRWGNGSGIFNYKAEAQGIMDAMLHQADDGVGVNFFNSTNNQIVFCPIPDVATFTDPSYHLPAFYDLWALWAD-----KDNDRWATIAKTSREFFKKTVHPTTGLSPEYANFDGSPKEVSWISGRGNYSYDAWRTIANSSVDYAWWGKDPWQQTFANNLQNFFYSQGLSSYVDKYTVSGTKVGVDHSVGVVAMNAVGSLAATNSH-ATEFVNELWNTYAPTGTWRYFNGSLYLLGLLECSGNFK 404          
BLAST of NO12G02250 vs. NCBI_GenBank
Match: BAV13036.1 (xylanase [Clostridium cellulovorans])

HSP 1 Score: 312.4 bits (799), Expect = 4.000e-81
Identity = 165/386 (42.75%), Postives = 240/386 (62.18%), Query Frame = 0
Query:  400 GAAEGGQYRNLFSEMLHKSEAEIDKKLGDTWRLLFEGNPINEAIYFPVGTTPEGDKLGYMTNTESGWVTSEAMSYGMMAAVQFEKKEVFDALWAWSTRYMKHITGKYKDFFAWQCSLAGQKMDPTPAPDGEEWFATALIFAHNRW-SSTGRYNYEKDALNLLAAM---ADPQRGM---FSEKGEVTLNPVQ--PTITNPSYHLPQFYEVWARFLTDRGQVKEAAFYLMAASKSRILWRKAANRHTGLAADYTDFDG--VGVKDLSGHSNFQWDAWRVVANLAVDWSWWRRDPWQEREADTLQAFLFSKGIHDYPSTYSLNGTAMSESHSVGLVAVNAVASLAATDKNVATAFVAELWNAAIPANKWRYYNGILAFLSLLQVSGRYR 775
            GA     YRNLF E   K++A++D+K+   +   F GN  ++ IY+PVGT      +GY+ +  +  V +EAMSYGMM AVQ +KK+ FD +W W+  YM H  G++K +FAWQC   G+ +D TPAPDGEE+F  +L+FA NRW + +G +NY+ +A  ++ AM   AD   G+    S   ++   P+    T T+PSYHLP FY++WA +       K+   +   A  SR  ++K  +  TGL+ +Y +FDG    V  +SG  N+ +DAWR +AN +VD++WW +DPWQ+  A+ LQ F +S+G+  Y   Y+++GT +   HSVG+VA+NAV SLAAT+ + AT FV ELWN   P   WRY+NG L  L LL+ SG ++
Sbjct:   44 GAYYTNTYRNLFVES-GKTQAQVDEKINKMFNQYFYGND-DQRIYYPVGT-----DMGYIKDIGNNDVRTEAMSYGMMIAVQLDKKDEFDRIWKWARTYMYHPDGQFKGYFAWQCDTNGKILDNTPAPDGEEYFVMSLLFAANRWGNGSGIFNYKAEAQGIMDAMLHQADDGVGVNFFNSTNNQIVFCPIPDVATFTDPSYHLPAFYDLWALWAD-----KDNDRWATIAKTSREFFKKTVHPTTGLSPEYANFDGSPKEVSWISGRGNYSYDAWRTIANSSVDYAWWGKDPWQQTFANNLQNFFYSQGLSSYVDKYTVSGTKVGVDHSVGVVAMNAVGSLAATNSH-ATEFVNELWNTYAPTGTWRYFNGSLYLLGLLECSGNFK 416          
BLAST of NO12G02250 vs. NCBI_GenBank
Match: WP_025705725.1 (hypothetical protein [Paenibacillus graminis])

HSP 1 Score: 310.5 bits (794), Expect = 1.500e-80
Identity = 170/401 (42.39%), Postives = 241/401 (60.10%), Query Frame = 0
Query:  383 WDNKPFIAPHGHSGTMLGAAEGGQYRNLFSEMLHKSEAEIDKKLGDTWRLLFEGNPINEAIYFPVGTTPEGDKLGYMTNTESGWVTSEAMSYGMMAAVQFEKKEVFDALWAWSTRYMKHITGKYKDFFAWQCSLAGQKMDPTPAPDGEEWFATALIFAHNRW-SSTGRYNYEKDALNLLAAMADP---QRGMFS-EKGEVTLNPVQPT--ITNPSYHLPQFYEVWARFLTDRGQVKEAAFYLMAASKSRILWRKAANRHTGLAADYTDFDGVGVKDLSGHSNFQWDAWRVVANLAVDWSWWRRDPWQEREADTLQAFLFSKGIHDYPSTYSLNGTAMSESHSVGLVAVNAVASLAATDKNVATAFVAELWNAAIPANKWRYYNGILAFLSLLQVSGRYRSY 777
            +D+ P + P      + GA   G YRNLF E   KS+AEID K+   ++ LF G+   + IY+PVGT      + Y+ +  +  V SE MSYGMM AVQ +KK  FD LW W+  YM++ +G  + +FAWQ   +G K+D  PA DGEE+F TAL+FA NRW S TG YNY  +A  LL  +  P   Q+ +F   + +V   P       ++PSYHLP FYE+WA +  +  Q+     +  AA+ SR  ++K A+  TGL  DY +FDG    +   H +F++DAWR + N+A+D+ W+ +D WQ+  AD +Q F   +GI  Y + YSL+G+++S  HS GLVA NAV +LAAT    +  FV E WN +IP+ ++RYY+G L  LSLL  SG ++ Y
Sbjct:  154 FDSVPALLPPAPVPPITGAFYSGVYRNLFKE-FGKSDAEIDAKVNTAFQQLFYGDNDTQRIYYPVGT-----DMAYILDKANNDVRSEGMSYGMMIAVQLDKKAEFDRLWKWAKTYMQNTSGTQQGYFAWQVDTSGNKIDTNPASDGEEYFITALLFAANRWGSGTGIYNYSTEAQTLLDRVLTPNSDQKTLFDLTQKQVVFVPYGSAAGFSDPSYHLPAFYELWALWDNNNNQL-----WRDAAATSREFFKKQAHSTTGLGPDYAEFDG-RPNNTGNHGDFRFDAWRTIMNVAMDYHWFAKDSWQKTYADRVQNFFHGQGIGAYANQYSLSGSSLSTDHSPGLVATNAVGTLAATTTK-SWEFVNEFWNTSIPSGQYRYYDGCLYMLSLLHASGNFKIY 541          
BLAST of NO12G02250 vs. NCBI_GenBank
Match: OHB64067.1 (hypothetical protein A2168_06180 [Planctomycetes bacterium RBG_13_50_24])

HSP 1 Score: 309.3 bits (791), Expect = 3.400e-80
Identity = 170/397 (42.82%), Postives = 228/397 (57.43%), Query Frame = 0
Query:  400 GAAEGGQYRNLFSEMLHKSEAEIDKKLGDTWRLLFEGNPINEAIYFPVGTTPEGDKLGYMTNTESGWVTSEAMSYGMMAAVQFEKKEVFDALWAWSTRYMKHITGKYKD--FFAWQCSLAGQKMDPTPAPDGEEWFATALIFAHNRW-SSTGRYNYEKDALNLLAAMADPQ------RGMFS-----------EKGEVTLNP--VQPTITNPSYHLPQFYEVWARFLTDRGQVKEAAFYLMAASKSRILWRKAANRHTGLAADYTDFDGVGVKDLSGHSNFQWDAWRVVANLAVDWSWWRRDPWQEREADTLQAFLFSKGIHDYPSTYSLNGTAMSESHSVGLVAVNAVASLAATDKNVATAFVAELWNAAIPANKWRYYNGILAFLSLLQVSGRYR 775
            GA   G YRNLF E  H SE ++  K+   ++  F G+P ++ +Y+P G+   G  L YM +     V SE MSYGMM AVQ +KK  FDALW WS  YM H    +    FF+WQ    G  M   PAPDGEE++A AL FA  RW + TG YNY+  A  LL  M   +      RG F+           E   +  +P   +  +T+PSYHLP FYE+W+R+    G  ++ AF+  AA+ SR  +++  N  TG+A +Y +FDG   K       F+ DAWR   N AVDWSWW +DP +   +D +Q F  S+GI  Y   Y L+GT + ++HS GLV  NAVASLAAT+   A  FV  LWNA IP+ ++RYY+G+L F+SLL  SG++R
Sbjct:  980 GAFATGTYRNLFVETGH-SEEQVTAKINMVYQHFFRGDPNSQTLYYPAGSNANG-PLAYMPDINHNDVRSEGMSYGMMIAVQLDKKAEFDALWNWSKTYMYHDDPAHPSYGFFSWQMRYDGTAMSELPAPDGEEYYAMALYFAAGRWGNGTGIYNYKAQAEKLLTHMVHREPITGMVRGRFAREQTVGRQVNVEHAMILFSPDSKRNNMTDPSYHLPAFYELWSRW----GPEEDRAFWQRAATASRDFFQQTTNPKTGMAPNYANFDGTPFKSFGRSDAFRHDAWRTAGNWAVDWSWWAKDPRERELSDRIQTFFESQGIDTYADQYELDGTPLGKAHSTGLVGTNAVASLAATNGPRARKFVEALWNAEIPSGQYRYYDGLLYFMSLLHCSGQFR 1370          
BLAST of NO12G02250 vs. NCBI_GenBank
Match: OLA00465.1 (hypothetical protein BHW11_10790 [Clostridium sp. CAG:62_40_43])

HSP 1 Score: 308.9 bits (790), Expect = 4.400e-80
Identity = 168/402 (41.79%), Postives = 245/402 (60.95%), Query Frame = 0
Query:  384 DNKPFIAPHGHSGTMLGAAEGGQYRNLFSEMLHKSEAEIDKKLGDTWRLLFEGNPINEAIYFPVGTTPEGDKLGYMTNTESGWVTSEAMSYGMMAAVQFEKKEVFDALWAWSTRYMKHITGKYKDFFAWQCSLAGQKMDPTPAPDGEEWFATALIFAHNRW-SSTGRYNYEKDALNLLAAM---ADPQRG--MFSEKGEV-TLNPV--QPTITNPSYHLPQFYEVWARFLTDRGQVKEAAFYLMAASKSRILWRKAANRHTGLAADYTDFDGVGVKDLSGHSNFQWDAWRVVANLAVDWSWWRRDPWQEREADTLQAFLFSKGIHDYPSTYSLNGTAMSESHSVGLVAVNAVASLAATDKNVATAFVAELWNAAIPANKWRYYNGILAFLSLLQVSGRYRSY 777
            D KPF  P   +   +GA    +YRNLF E L  S+AEID+K+   W+ LF GN   E IY+PV     G+ + Y+   ++  V SE MSYGMM  VQ +K+E F+ LW W+  YM+H +G++K +FAWQ    G K+  TPA DGEE+FAT+L+FA  RW +  G YNY K+A  +L  M   AD  +G  MF +  ++    P+    T ++PSYHLP FYEVWA         ++  F+  AA  SR  ++ A N  TGL  DY+++ G   K+   H +F++DAWR+ AN+A D++WW +D W    A+ +Q+F + +G+  Y + +SL+G  +   HS GLVA+NA ASLA++DK  + +F+ +LWN +    K+RYY+G L  + LL  SG++R+Y
Sbjct:  390 DVKPF--PDAPTPASMGAVYTEKYRNLFKE-LGYSDAEIDEKVESAWKKLFYGND-EERIYYPV-----GEDMAYIYTADTDDVRSEGMSYGMMICVQMDKQEEFNRLWKWAKTYMQHTSGEFKGYFAWQMKTDGSKISGTPASDGEEYFATSLLFASARWGNGEGIYNYNKEAQEILTTMLHQADDGQGVNMFDKTHKMPVFCPIGNAATYSDPSYHLPAFYEVWA-----IKAEQDNDFWSEAAEASRQHFKDATNEKTGLGPDYSEYTG-AAKNEGNHGDFRFDAWRIAANIACDYAWWAKDTWATTHANRIQSFFYDQGVDSYGNQWSLDGKNLGPDHSPGLVAMNATASLASSDKK-SWSFLEDLWNISPTTGKYRYYDGCLYMMGLLHCSGKFRAY 775          
BLAST of NO12G02250 vs. NCBI_GenBank
Match: OGC02117.1 (hypothetical protein A2V82_00785 [candidate division KSB1 bacterium RBG_16_48_16])

HSP 1 Score: 307.8 bits (787), Expect = 9.800e-80
Identity = 169/397 (42.57%), Postives = 237/397 (59.70%), Query Frame = 0
Query:  394 HSGTMLGAAEGGQYRNLFSEMLHKSEAEIDKKLGDTWRLLFEGNPINEAIYFPVGTTPEGDKLGYMTNTESGWVTSEAMSYGMMAAVQFEKKEVFDALWAWSTRYMKHITGKYKDFFAWQCSLAGQKMDPTPAPDGEEWFATALIFAHNRW-SSTGRYNYEKDALNLLAAMADPQR---------GMFSEK-GEVTLNPV--QPTITNPSYHLPQFYEVWARFLTDRGQVKEAAFYLMAASKSRILWRKAANRHTGLAADYTDFDGVGVKDLSGHS-NFQWDAWRVVANLAVDWSWWRRDPWQEREADTLQAFLFSKGIHDYPSTYSLNGTAMSESHSVGLVAVNAVASLAATDKNVATAFVAELWNAAIPANKWRYYNGILAFLSLLQVSGRYRSY 777
            H     GA   G Y NLF E+L  SE+++  K+   W  LF G+   + +Y+PV    E D + Y+ +T    + SE MSYGMM AVQ  K+  FD LW W+  YM+H +G  K++FAWQ    G  MD   A DGEEW   AL FA  RW + TG YNY+ +A  +L AM + +           MF++K  ++   PV      ++PSYHLP FYE+WAR+       KE  F+  AAS SR   +KAA+  TGL  DY  FDG  +   +G S +F++DAWRV  NLAVD++W+ +D W   +++ +  F   +G+  Y + ++L+G  +S+ HS GLVA+NAVASLA+T+ +  T FV ELWNA+IP+   RYY+G+L  L++LQVSG +R Y
Sbjct:   41 HISQPAGAYYSGVYPNLFQELLGISESQVHAKIDSAWNQLFYGDDQTQRVYYPV----EPD-MAYIEDTWHNDIRSEGMSYGMMIAVQLNKRAEFDRLWKWAKTYMQHKSGARKNYFAWQLHTNGAMMDHNSASDGEEWIVMALFFASARWGNGTGIYNYQSEAQAILDAMLNKEETSDNDTTITNMFNKKEKQIVFVPVGNADDFSDPSYHLPHFYELWARWAD-----KENQFWCDAASASRRFLKKAAHPKTGLLPDYAHFDGTPIDPWNGGSDDFRFDAWRVAMNLAVDYTWFAKDDWAVEQSNIMLRFFHDQGVGTYGNLFTLDGVKLSDDHSTGLVAMNAVASLASTN-DFRTDFVRELWNASIPSGAGRYYDGLLYMLAMLQVSGNFRIY 426          
The following BLAST results are available for this feature:
BLAST of NO12G02250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005856116.18.000e-23156.37glycoside hydrolase family 8 [Nannochloropsis gadi... [more]
WP_026073703.12.300e-8945.27glycoside hydrolase [Acetivibrio cellulolyticus][more]
EWM28560.12.600e-8844.96glycoside hydrolase family 8 [Nannochloropsis gadi... [more]
PKO19013.11.600e-8243.48glycoside hydrolase [Chloroflexi bacterium HGW-Chl... [more]
WP_010076216.14.000e-8142.75glycoside hydrolase [Clostridium cellulovorans] >A... [more]
BAV13036.14.000e-8142.75xylanase [Clostridium cellulovorans][more]
WP_025705725.11.500e-8042.39hypothetical protein [Paenibacillus graminis][more]
OHB64067.13.400e-8042.82hypothetical protein A2168_06180 [Planctomycetes b... [more]
OLA00465.14.400e-8041.79hypothetical protein BHW11_10790 [Clostridium sp. ... [more]
OGC02117.19.800e-8042.57hypothetical protein A2V82_00785 [candidate divisi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL126nonsL126Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR008ngnoR008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010121NSK010121Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02250.1NO12G02250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|631024gene_5385Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100021g14gene4678Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02250.1NO12G02250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02250 ID=NO12G02250|Name=NO12G02250|organism=Nannochloropsis oceanica|type=gene|length=2691bp
ATGTTTTGGCGGTCGCATCAAAACCAACCGTCGCCCCTGCCACCTCCGCA
GGCAGGGGACAGCGAGGACGGCTATGACCAATACGTTTGGGAAGAGGAAG
GGGAGGAAGCCAAATCCGGCCTGCAGGCAGTGCGTTTCACTGTAAGTACT
AGTGCCGGAGGCGCAAGCAGCGAGCGATACGAGTATAATGAACAGGAAGA
GGGGGAAGGGGGTCTGGGTGGGGCGCGACCAACAGGATCACCACGGCTCT
CGGGTCTTTTCAGTCGCTTTGGCCACCAAGACGGCAGCCAACTCCTGCTC
GGCGGCAGTCGCAAGTCCCTAACTAAAATAAATCACAAGAACTCCCGAGG
CAGCATGACAGGTGAGGCCAGTACCGGCAGCTTAGTCAGCGGCGGCGGGG
CTAGTACCAGCATCCACCTCAAGAGCCTTACCCCTTCGGGCTCGTCACGT
ACCACCGCTCGCGGCTCCCCAACGCATCCCTCCAATCTCGGCCGGTCCGG
CACCCTCCGCGCCCGCTCCCCACAAACCACCACCCTTCTACGGACCGACG
CCGTCTTCTCTGATTCTCGACAACGCCTCGACCAACTCGATGGTGGCAGC
GGCATAAGCGGGAGCTCCCAAAACCTACGGCGATCAGGGTCAATGCCTGT
GCGTCTCGGTGTCCACCCTTCCTCCAGACCTTCGAATGCCGCCATCGCGG
CTGCAGCGGCGGCAGCCGCGCATCAGGGGGAGAGAGTGAGACAAAGCATG
TTAAGAGGAGGTGGAATGATGTTGGACGAGGACACGGGGATGTGGAATTC
AGTCTCCTTTGGCGGCACGAAAGGGTTGATGAAGAGTGATGGGTCCAAGG
TGATGGTGGGGATAGATCCATTGCACCAGAGGCCGTCATTTCAGGATATG
GGTCAATTTGAGAAGGAGACAGAGGAACGAGGGGCGGCAAACGCAGCAGG
GGTATTGGTTTCGATAGGGTATGCCTTGGTAATGCCGGCGGTCAGgtacg
tcttttattgggtcaggacgggagggaagatgtaaagggaaggggaggca
gcgctactacagtcgatgatctcattcaccacctcattaatgcacgcctt
caaccttcgctttggtttatttcgtgcttgatgctcacagTGTCTTAAAA
AGAACCCGCCGCTTCGTCCGCGCAAACCAAATACGGGTCCTCTCCTCCCT
GGTTATCCTCGTCATACTCACCCTCTGCATCATCCTCGCCGCCGTCTACT
TTCCGTCCCATACGGGAAAGCACCATATCCGCGGCGACCCCTGGGACAAC
AAGCCTTTCATCGCCCCCCACGGTCATTCAGgtagggaggagttcctata
aattcccaatatgtgtagctattgccgccgctgttggatttagagacgtg
ttttgttgccttgcctgtgaaacgaccatctcctgcccactcgcttgcca
tatatatacatatatatatatgtattcggtatctcttctttcttgaaatt
tcccttcccttcccccttccttcccccttccctcccccccaagGCACCAT
GCTCGGCGCGGCCGAAGGCGGTCAATACCGGAACCTCTTCTCGGAAATGC
TACACAAATCCGAAGCAGAAATCGACAAGAAGCTCGGAGACACCTGGAGG
TTGCTTTTCGAGGGGAACCCCATCAACGAAGCCATCTATTTCCCTGTGGG
TACCACGCCCGAAGGAGATAAATTGGGGTACATGACCAACACGGAGAGTG
GGTGGGTGACGAGCGAGGCCATGTCGTATGGGATGATGGCGGCGGTGCAG
TTTGAAAAGAAGGAGGTCTTCGACGCCTTGTGGGCCTGGTCGACACGCTA
CATGAAACACATCACTGGCAAGTACAAGGACTTTTTCGCGTGGCAGTGCT
CACTAGCTGGACAGAAGATGGATCCAACCCCAGCACCGGATGGGGAGGAG
TGGTTCGCCACAGCTCTGATCTTTGCGCACAATAGGTGGTCGTCTACAGG
GAGGTATAACTACGAGAAGGACGCACTGAATCTACTCGCTGCCATGGCAG
ACCCTCAGCGAGGCATGTTCAGTGAGAAAGGGGAAGTGACGCTGAATCCG
GTGCAGCCTACCATTACAAATCCGTCTTACCACCTTCCTCAGTTTTATGA
GGTCTGGGCGCGTTTTTTGACCGATAGAGGACAAGTAAAAGAGGCTGCAT
TTTACCTGATGGCAGCGAGCAAGAGCAGGATTCTGTGGAGAAAGGCCGCA
AACCGACACACAGGGCTAGCAGCCGATTACACTGATTTTGATGGGGTGGG
GGTAAAGGACCTGTCGGGGCACTCCAACTTTCAATGGGACGCGTGGAGGG
TGGTGGCTAATCTAGCTGTGGACTGGTCGTGGTGGAGGCGCGATCCCTGG
CAAGAACGGGAGGCGGACACATTACAAGCGTTCTTGTTCTCGAAGGGAAT
TCATGACTACCCATCTACGTACTCGTTGAATGGGACGGCAATGTCGGAGA
GTCACTCCGTGGGGCTAGTGGCAGTGAATGCCGTGGCTTCCTTGGCGGCG
ACTGATAAGAATGTGGCCACGGCTTTCGTGGCCGAGCTTTGGAACGCAGC
GATTCCGGCGAATAAGTGGAGGTATTACAATGGTATTTTGGCGTTTCTCT
CTTTGTTGCAGGTATCAGGCAGGTATCGGAGTTATTATTAG
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protein sequence of NO12G02250.1

>NO12G02250.1-protein ID=NO12G02250.1-protein|Name=NO12G02250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=778bp
MFWRSHQNQPSPLPPPQAGDSEDGYDQYVWEEEGEEAKSGLQAVRFTVST
SAGGASSERYEYNEQEEGEGGLGGARPTGSPRLSGLFSRFGHQDGSQLLL
GGSRKSLTKINHKNSRGSMTGEASTGSLVSGGGASTSIHLKSLTPSGSSR
TTARGSPTHPSNLGRSGTLRARSPQTTTLLRTDAVFSDSRQRLDQLDGGS
GISGSSQNLRRSGSMPVRLGVHPSSRPSNAAIAAAAAAAAHQGERVRQSM
LRGGGMMLDEDTGMWNSVSFGGTKGLMKSDGSKVMVGIDPLHQRPSFQDM
GQFEKETEERGAANAAGVLVSIGYALVMPAVSVLKRTRRFVRANQIRVLS
SLVILVILTLCIILAAVYFPSHTGKHHIRGDPWDNKPFIAPHGHSGTMLG
AAEGGQYRNLFSEMLHKSEAEIDKKLGDTWRLLFEGNPINEAIYFPVGTT
PEGDKLGYMTNTESGWVTSEAMSYGMMAAVQFEKKEVFDALWAWSTRYMK
HITGKYKDFFAWQCSLAGQKMDPTPAPDGEEWFATALIFAHNRWSSTGRY
NYEKDALNLLAAMADPQRGMFSEKGEVTLNPVQPTITNPSYHLPQFYEVW
ARFLTDRGQVKEAAFYLMAASKSRILWRKAANRHTGLAADYTDFDGVGVK
DLSGHSNFQWDAWRVVANLAVDWSWWRRDPWQEREADTLQAFLFSKGIHD
YPSTYSLNGTAMSESHSVGLVAVNAVASLAATDKNVATAFVAELWNAAIP
ANKWRYYNGILAFLSLLQVSGRYRSYY*
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Synonyms
Publications