NO12G01910, NO12G01910 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G01910 vs. NCBI_GenBank
Match: EWM25801.1 (peroxisomal biogenesis factor 3 [Nannochloropsis gaditana]) HSP 1 Score: 575.9 bits (1483), Expect = 1.100e-160 Identity = 309/451 (68.51%), Postives = 348/451 (77.16%), Query Frame = 0 Query: 1 MESLSKAYHFLRRNRRAIGLVAGVSAAGLAMWRVKRVLDEYKRLIKEHDVARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVNEIVDVTSPVKALKAGRGELSKEQEQALWQQVKVSGFTRFFLAYYGFTLLNVMLRVQVHILGRYAFETSRREIDGA-----XXXXXXXXXXCSLNDEQVYAAAGAPTFGADDRCKLLSLVYEFFLGEGLRRLKESVEIVISEELGGWSVHDKVHVGYEELHDAFSRIRRRMEGPRGVTTAELPLLQYIVDMSSITEDELGGGGNILHEMVNETWDALESPSFKLAVEDCLDATFRVFLEDLFVCLYASRPAPASLASKTIGRMRNVEEEEDAKGR-MGEGKERGGFLQ-EPQETGQDSSPESNPGQGGKASDK--DPPLAKLIPHMKNAATKVFNNDPQSNEYIRVTAQNRSVNLLCSSFFTTEISF 443 M L + YHFL+RNRRAIGL+AG SAAG A WR+KRVLD+YKR+I+EHD+ARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRV EIVDVTSPVKALKAGRG LSK++EQALW QVKVSGF+RFFLAYYGF LLNVMLRVQVHILGRYAFE SR+E+ A CSL D YAA G+ +FG+DDRC+LLSLVYE FLGEGLRRLKE+VE+ + EELG WSVH K+HV Y ELHDA RIRRR+EGPRGV AE PLLQY++D +S ED LG G+ LHEMVNETWDA ESPSFKLAVEDCLD TFRVFLEDLF LYAS P+ + R+ D K R +GEG G + +E G + + +S+ + G K DPPLAKLIPHMKNAATKVFN DPQ+NEYIR+TAQNRSVNLLCSSFFT E SF Sbjct: 1 MGRLQQVYHFLKRNRRAIGLIAGASAAGFAAWRIKRVLDDYKRIIREHDLARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVYEIVDVTSPVKALKAGRGGLSKQEEQALWHQVKVSGFSRFFLAYYGFNLLNVMLRVQVHILGRYAFEASRQEMLQAAQRDQEEGQGPRGEFCSLGDAG-YAATGSSSFGSDDRCRLLSLVYEHFLGEGLRRLKEAVEVAVREELGAWSVHAKIHVDYAELHDALMRIRRRLEGPRGVLLAESPLLQYVLDAASQAED-LGPPGSRLHEMVNETWDAFESPSFKLAVEDCLDVTFRVFLEDLFRSLYASPPSAS----------RSARPGADEKERPLGEGIGEGPVAERSTEEEGSEEARDSDADRAGAEESKPLDPPLAKLIPHMKNAATKVFNGDPQNNEYIRITAQNRSVNLLCSSFFTIETSF 439
BLAST of NO12G01910 vs. NCBI_GenBank
Match: XP_005856109.1 (peroxin-3 [Nannochloropsis gaditana CCMP526] >EKU20245.1 peroxin-3 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 281.2 bits (718), Expect = 5.600e-72 Identity = 146/197 (74.11%), Postives = 162/197 (82.23%), Query Frame = 0 Query: 1 MESLSKAYHFLRRNRRAIGLVAGVSAAGLAMWRVKRVLDEYKRLIKEHDVARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVNEIVDVTSPVKALKAGRGELSKEQEQALWQQVKVSGFTRFFLAYYGFTLLNVMLRVQVHILGRYAFETSRREIDGA-----XXXXXXXXXXCSLNDEQVYAAAGAPTFGADDR 193 M L + YHFL+RNRRAIGL+AG SAAG A WR+KRVLD+YKR+I+EHD+ARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRV EIVDVTSPVKALKAGRG LSK++EQALW QVKVSGF+RFFLAYYGF LLNVMLRVQVHILGRYAFE SR+E+ A CSL D YAA G+ +FG+DDR Sbjct: 1 MGRLQQVYHFLKRNRRAIGLIAGASAAGFAAWRIKRVLDDYKRIIREHDLARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVYEIVDVTSPVKALKAGRGGLSKQEEQALWHQVKVSGFSRFFLAYYGFNLLNVMLRVQVHILGRYAFEASRQEMLQAAQRDQEEGQGPRGEFCSLGDAG-YAATGSSSFGSDDR 196
BLAST of NO12G01910 vs. NCBI_GenBank
Match: XP_002185591.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC42889.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 101.7 bits (252), Expect = 6.100e-18 Identity = 78/273 (28.57%), Postives = 129/273 (47.25%), Query Frame = 0 Query: 59 QMHMLRSRGECVPALLNFMQTLRKRV---NEIVDVTSPVKALKAGR-----GELSKEQEQALWQQVKVSGFTRFFLAYYGFTLLNVMLRVQVHILGRYAFETSRREIDGAXXXXXXXXXXCSLNDEQVYAAAGAPTFGADDRCKLLSLVYEFFLGEGLRRLKESVEIVISEELGGWSVHDK--VHVGYEELHDAFSRIRRRMEG--------PRGVTTAELPLLQYIVDMSSITEDELGGGGNILHEMVNETWDALESPSFKLAVEDCLDATF 314 + M R R E AL F LR V T +K L+A R + +EQALW++++ TR Y T+L ++L QV++LG FE S + S++++ V A+ + +L Y++FL +G+ L +VE + LGGW+V DK +H+ E+ A +IR +EG G ++ +L++++ SSI E + ++ +++ETWD +ESP F A ++CL+ATF Sbjct: 95 RQRMTRCRQEAAQALRGFSPALRSIVELHTNTAQATRLLKQLRANRTTEKHATSRRSEEQALWKEIQRKTMTRMLTTAYAHTILFLVLTTQVNLLGGRLFEESLQNTS--------LSSNVSMSNDSV--ASDRMVSYQESHRFVLQHTYDYFLNKGVHSLLSTVEQAVDSVLGGWNVFDKACLHISREQFDCALVKIRGLIEGGLRTDVSRTSGRSSRRESILRFLMP-SSILEHSI--QDDLARSILDETWDLVESPVFSDAQQECLNATF 354
BLAST of NO12G01910 vs. NCBI_GenBank
Match: GAY01892.1 (Hypothetical protein PINS_009713 [Pythium insidiosum]) HSP 1 Score: 99.8 bits (247), Expect = 2.300e-17 Identity = 96/326 (29.45%), Postives = 160/326 (49.08%), Query Frame = 0 Query: 10 FLRRNRRAIGLVAGV--SAAGLAMWRVKRVLDEYKRLIKEHDVARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVNEIVDVTSPVKALKAGRGELSKEQEQALWQQVKVSGFTRFFLAYYGFTLLNVMLRVQVHILGRYAFETSRREIDGAXXXXXXXXXXCSLNDEQVYAAAGAPTFGADDRCKLLSLVYEFFLGEGLRRLKESVEIVIS--EELGGWSVHDKVHVGYEELHDAFSRIRRRMEGPRGVTTAELPLLQYIVDMSS------ITEDELGGGGNILHEMVNETWDALESPSFKLAVEDCLDATFRVFLEDLFVCLY 326 F+RR++RA+ + GV AG + +R+L E +R ++ V + RLQ+ + + E + F+ L+K + +++D+ V+ LK + K + LW Q K + TR+F A F L ++++ Q+ I+G+ FETS++ GA XXXXXXXX +D+Q A A L+ E+FL GL+R+K+ VE V+S +L W V K V EEL++ + + P+ ++A+ D S+ I D+ G + ++N+ WD LES F A++ L +DL +Y Sbjct: 15 FVRRHKRAV-IATGVVTLCAGGVYYGYRRMLSEAERFTQQLRVQMAEHQRLQLALASTTEESNATIQRFLPRLKKTLYQLIDLERIVQELKT-LDKSDKRRRNDLWDQAKRTAVTRYFTALIAFGLWHLLVFAQIAIIGKRTFETSKKH--GASAXXXXXXXXXD-DDQQRLTAQHA----------FLASGLEYFLDHGLQRIKDHVEAVVSANAQLQSWDVSRKARVEREELNELLQAVYLAILPPQTGSSAD--------DQSALWRSFLIFPDKRPGQSEEVISLLNDLWDLLESDLFGPALQHSLGFLCGNAFQDLNEVVY 317
BLAST of NO12G01910 vs. NCBI_GenBank
Match: GAX98743.1 (Hypothetical protein PINS_006597 [Pythium insidiosum]) HSP 1 Score: 99.4 bits (246), Expect = 3.000e-17 Identity = 96/326 (29.45%), Postives = 159/326 (48.77%), Query Frame = 0 Query: 10 FLRRNRRAIGLVAGV--SAAGLAMWRVKRVLDEYKRLIKEHDVARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVNEIVDVTSPVKALKAGRGELSKEQEQALWQQVKVSGFTRFFLAYYGFTLLNVMLRVQVHILGRYAFETSRREIDGAXXXXXXXXXXCSLNDEQVYAAAGAPTFGADDRCKLLSLVYEFFLGEGLRRLKESVEIVIS--EELGGWSVHDKVHVGYEELHDAFSRIRRRMEGPRGVTTAELPLLQYIVDMSS------ITEDELGGGGNILHEMVNETWDALESPSFKLAVEDCLDATFRVFLEDLFVCLY 326 F+RR++RA+ + GV AG + +R+L E +R ++ V + RLQ+ + + E + F+ L+K + +++D+ V+ LK + K + LW Q K + TR+F A F L ++++ Q+ I+G+ FETS++ GA XXXXXXXX +D+Q A A L+ E+FL GL+R+K+ VE V+S +L W V K V EEL++ + + P+ + A+ D S+ I D+ G + ++N+ WD LES F A++ L +DL +Y Sbjct: 15 FVRRHKRAV-IATGVVTLCAGGVYYGYRRMLSEAERFTQQLRVQMAEHQRLQLALASTTEESNATIQRFLPRLKKTLYQLIDLERIVQELKT-LDKSDKRRRNXLWDQAKRTAVTRYFTALIAFGLWHLLVFAQIAIIGKRTFETSKKH--GASAXXXXXXXXXD-DDQQRLTAQHA----------FLASGLEYFLDHGLQRIKDHVEAVVSANAQLQSWDVSRKARVEREELNELLQAVYLAILPPQTGSXAD--------DQSALWRSFLIFPDKRPGQSEEVISLLNDLWDLLESDLFGPALQHSLGFLCGNAFQDLNEVVY 317
BLAST of NO12G01910 vs. NCBI_GenBank
Match: GBG24957.1 (Peroxisomal biosis factor 3 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 95.5 bits (236), Expect = 4.400e-16 Identity = 93/352 (26.42%), Postives = 150/352 (42.61%), Query Frame = 0 Query: 4 LSKAYHFLRRNRRAIGLVAGVSAAGL-AMWRVKRVLDEYKRLIKE-----HDVARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVNEIVD---VTSPVKALKAGR------GELSKEQEQALWQQVKVSGFTRFFLAYYGFTLLNVMLRVQVHILGRYAFE--TSRREIDGAXXXXXXXXXXCSLNDEQVYAAAGAPTFGADDRCKLLSLVYEFFL----------GEGLRRLKESVEIVISEELGGWSVHDKVHVGYEELHDAFSRIRRRMEGPRGVTTAELPLLQYIVDMSSIT-----EDELG----------GGGNILHEMVNETWDALESPSFKLAVEDCLDATF 314 L + + FL+ +++ + V+A G+ + KR++ + R ++E + Q+R + + R R EC +L F+ LR V ++ D VT +KA++ R +E+ LW ++KV R ++ Y LLN +LR+Q+HILGRYAFE S+R + A + V AA A + + + E FL G G+ + ++ I W + V ++ + +IR +EG RG AE L V S I EDE G +L +M+ ET D +ESP+F L+ E D F Sbjct: 5 LGRTWDFLKWHKKKFIALGSVTALGVGGYYYAKRMVLDGMRQVEELGRGLQEKMMETQYR-ESELARVRAECGSMILTFVPPLRNMVKKLTDPKPVTERLKAVRLKRKNEGMPSAQDEEEVMQLWDELKVISLARLIVSIYALGLLNCVLRIQLHILGRYAFEEAISQRRAEAAASSETADAAGVKQLEAGVEGAASASHVSEESTGLVSQRLRESFLFSGSDHFMNSGSGMETMLYHIQESIQRATKDWHMGTDATVNRWDILNMIDKIREEVEG-RGTDGAEGGLRLSEVTRSWIVKCLVPEDEEGVLSPDPDLNDEQNAMLRDMLEETLDMIESPNFALSAEQTFDRLF 354
BLAST of NO12G01910 vs. NCBI_GenBank
Match: XP_008610536.1 (hypothetical protein SDRG_06533 [Saprolegnia diclina VS20] >EQC35774.1 hypothetical protein SDRG_06533 [Saprolegnia diclina VS20]) HSP 1 Score: 94.4 bits (233), Expect = 9.800e-16 Identity = 78/312 (25.00%), Postives = 136/312 (43.59%), Query Frame = 0 Query: 24 VSAAGLAMWRVKRVLDEYKRLIKEHDVARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVNEIVDVTSPVKALKAGRGELSKEQEQALWQQVKVSGFTRFFLAYYGFTLLNVMLRVQVHILGRYAFETSRREIDGAXXXXXXXXXXCSLNDEQVYAAAGAPTFGADDRCKLLSLVYEFFLGEGLRRLKESVEIVISEE--LGGWSVHDKVHVGYEELHDAFSRIRRRMEGPRGVTTAELPLL--QYIVDMSSITEDELGGGGNILHEMVNETWDALESPSFKLAVEDCLDATFRVFLEDLFVCLYASRPAP 332 V+ A + VKRV+ E + ++ + + RLQMH+ RS+ E A L F+ +L+ R+ +++D+ V LK + +E ++W+ K+ GF R F + F L++++ ++ ILGR F + E D +GA D + + LS E+F GL +L +E + L W V +K V +L + R + ++A +L +++ + E G + ++NE WD LE+P FK A+ +D F + D+ LY P Sbjct: 30 VACGAGAYYGVKRVIREAETMMLDSQRELVAHQRLQMHLGRSQEEIKAAFLRFVPSLKTRLYKLLDLEGIVANLKV-LDKSEREMRDSMWEDAKLLGFGRLFAGLHAFCQLHLLVHCELLILGRETFHKHKGEDD----------------------TSGA---SVDVQQQFLSSTLEYFFETGLPKLTAEIESRLGNHPTLQTWRVKEKAQVDKADL----DHLLRELHATCLPSSANDHVLWHSFLIYPDDVPEAHPAG----VLPLLNELWDILETPFFKDALRASIDCLFELLATDIVAALYPHEAGP 307
BLAST of NO12G01910 vs. NCBI_GenBank
Match: XP_002908771.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY57585.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 93.6 bits (231), Expect = 1.700e-15 Identity = 87/335 (25.97%), Postives = 153/335 (45.67%), Query Frame = 0 Query: 10 FLRRNRRAIGLVAGVSA--AGLAMWRVKRVLDEYKRLIKEHDVARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVNEIVDVTSPVKALKAGRGELSKEQEQALWQQVKVSGFTRFFLAYYGFTLLNVMLRVQVHILGRYAFETSRREIDGAXXXXXXXXXXCSLNDEQVYAAAGAPTFGADDRC--KLLSLVYEFFLGEGLRRLKESVEIVI--SEELGGWSVHDKVHVGYEELHDAFSRI-RRRMEGPRGVTTAELPLLQYIVDMSS-----ITEDELGGGGNILHEMVNETWDALESPSFKLAVEDCLDATFRVFLEDLFVCLYA-SRPAP 332 F RR+++ + +V GV A AG A + +R+L E +R ++ V + LQ+ + + E + F+ L+ R+ +++D+ S V+ LK + K + LW+ K+ FTR+ A F L ++++ QV I+G+ FE S+R L+D Q A+++ L+ E+FL E L ++K VE V+ +++L W V K V +EL++ + + P V AE + ++ I D+ G + ++N+ WD LES F A++ L +DL +Y S+P P Sbjct: 15 FARRHKKLL-IVTGVGAACAGGAYYAYRRMLSEAERFTQQIQVQMAEHQHLQLALGSTADESRATVRRFLPRLKTRLYQLLDLESVVQELKT-LNKTQKSRRNTLWEDAKLLAFTRYLTALVAFGLWHLLVFAQVSIIGKRVFEKSKRS---------------ELSDRQKQREE------AEEQAHHAFLTSGLEYFLDEALDKIKAHVEAVVKKNKQLQAWKVSRKAAVTADELNELLQALFLAVLPSPAAVAAAEKQ--EQSTELHKWREFLIYSDKQKGQDEHVIGLLNDLWDLLESDLFMPALQHSLGFLCGNAFQDLDDVVYGPSKPEP 324
BLAST of NO12G01910 vs. NCBI_GenBank
Match: POM69269.1 (Hypothetical protein PHPALM_14457 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 93.6 bits (231), Expect = 1.700e-15 Identity = 80/308 (25.97%), Postives = 142/308 (46.10%), Query Frame = 0 Query: 10 FLRRNRRAIGLV-AGVSAAGLAMWRVKRVLDEYKRLIKEHDVARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVNEIVDVTSPVKALKAGRGELSKEQEQALWQQVKVSGFTRFFLAYYGFTLLNVMLRVQVHILGRYAFETSRREIDGAXXXXXXXXXXCSLNDEQVYAAAGAPTFGADDRCKLLSLVYEFFLGEGLRRLKESVEIVISE--ELGGWSVHDKVHVGYEELHDAFSRI-RRRMEGPRGVTTAE----LPLLQYIVDMSSITEDELGGGGNILHEMVNETWDALESPSFKLAVEDCL 310 F RR+++ + + GV+ AG A + +R+L E +R ++ V + RLQ+ + + E + F+ L+ R+ +++D+ S V+ LK + K + LW+ K+ FTR+ A F L ++++ QV I+G+ FE S+ E+ +EQ + A L+ E+FL E + ++K VE V+ E +L W V K V EEL++ + + P V AE LQ + + + G +++ ++N+ WD LES F A++ L Sbjct: 15 FARRHKKLLVVTGVGVACAGGAYYAYRRMLSEAERFTQQIQVQMAEHQRLQLALGSTADESRATVRRFLPRLKTRLYQLLDLESVVQELKT-LDKTQKSKRNELWEDAKLLAFTRYLTALVAFGLWHLLVFAQVSIIGKRVFEKSQVELSERQKQREKA-------EEQAHHA-------------FLTSGLEYFLDEAMGKIKIHVEAVVRENKQLQAWKVSRKAAVRAEELNELLQALFLAVLPSPTAVAAAEKQEDSAELQKWREFLIYPDKQKGQDEHVI-SLLNDLWDLLESDLFMPALQHSL 300
BLAST of NO12G01910 vs. NCBI_GenBank
Match: OWZ16566.1 (hypothetical protein PHMEG_0009621 [Phytophthora megakarya]) HSP 1 Score: 93.2 bits (230), Expect = 2.200e-15 Identity = 89/333 (26.73%), Postives = 151/333 (45.35%), Query Frame = 0 Query: 10 FLRRNRRAIGLVAGVSA--AGLAMWRVKRVLDEYKRLIKEHDVARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVNEIVDVTSPVKALKAGRGELSKEQEQALWQQVKVSGFTRFFLAYYGFTLLNVMLRVQVHILGRYAFETSRREIDGAXXXXXXXXXXCSLNDEQVYAAAGAPTFGADDRCKLLSLVYEFFLGEGLRRLKESVEIVI--SEELGGWSVHDKVHVGYEELHDAFSRI-RRRMEGPRGVTTAE-----LPLLQYIVDMSSITEDELGGGGNILHEMVNETWDALESPSFKLAVEDCLDATFRVFLEDLFVCLYA-SRPAP 332 F RR+++ + +V GV A AG A + +RVL E +R + + RLQ+ + + E + F+ L+ R+ +++D+ S V+ LK + K + LW+ K+ FTR+ A F L ++++ QV I+G+ FE ++ E+ +EQ + A LS E+FL E L ++K VE V+ +E+L W V K V +EL++ + + P V AE L ++ + I D+ G + ++N+ WD LES F A++ L +DL +Y S+P P Sbjct: 15 FARRHKKLL-IVTGVGAACAGGAYYAYRRVLGEAERFSLQIQEQMAEHQRLQLALGSTADESRATVRRFLPRLKTRLYQLLDLESVVQELKT-LDKTQKNKRNELWEDAKLLAFTRYLTALVAFGLWHLLVFAQVSIIGKRVFEKNQVELSERQKQREQA-------EEQAHHA-------------FLSSGLEYFLDEALGKIKTHVEAVVRENEQLQAWKVSRKAAVRADELNELLQALFLEVLPSPAAVVAAEKQEDSAELQKWRAFL--IYPDKQKGQDEHVISLLNDLWDLLESDLFVPALQHSLGFLCGNAFQDLDDVVYGPSKPEP 323 The following BLAST results are available for this feature:
BLAST of NO12G01910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G01910 ID=NO12G01910|Name=NO12G01910|organism=Nannochloropsis oceanica|type=gene|length=1444bpback to top protein sequence of NO12G01910.1 >NO12G01910.1-protein ID=NO12G01910.1-protein|Name=NO12G01910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=444bpback to top Synonyms
Publications
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