NO12G01640, NO12G01640 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G01640 vs. NCBI_GenBank
Match: GAX15622.1 (hypothetical protein FisN_3Hu093 [Fistulifera solaris]) HSP 1 Score: 150.2 bits (378), Expect = 2.000e-32 Identity = 70/169 (41.42%), Postives = 103/169 (60.95%), Query Frame = 0 Query: 296 ISPQEFLWGILQERGYETSPLFSKTQAFFR-PPTPKQVEDYDIALLNAVKTGDLAQLQDMAQQGRQMDACNKYGESIVHISCRRGQAETLRFLLAHGGKVHMCDDLGRTPLHDACWAKEPVFDCISTILDADPELIRMVDCRGASPLAYIRRAHWREWKEFFDSKKEKY 464 +SPQ +L +LQ RG TS F + +R PTP Q Y L+ V+ GD+ L+ M Q G + C+ GES++H+ CRRG+++ L+ L +G + + D LGRTPLH+ACW+K P F I IL AD L M D +GA PL+Y+R+ +WR+W F ++K+ + Sbjct: 133 VSPQMYLESLLQSRGL-TSERFKTLETGYRNMPTPLQASSYGPVLVEHVRNGDIEALEKMLQAGISPNPCSATGESLIHLICRRGESKMLKLFLNYGASIQVSDSLGRTPLHEACWSK-PCFKTIELILKADANLFNMADGQGAVPLSYVRKGYWRQWVHFLEAKQNVF 299
BLAST of NO12G01640 vs. NCBI_GenBank
Match: GAX15611.1 (hypothetical protein FisN_3Hh082 [Fistulifera solaris]) HSP 1 Score: 148.3 bits (373), Expect = 7.600e-32 Identity = 65/168 (38.69%), Postives = 99/168 (58.93%), Query Frame = 0 Query: 297 SPQEFLWGILQERGYETSPLFSKTQAFFRPPTPKQVEDYDIALLNAVKTGDLAQLQDMAQQGRQMDACNKYGESIVHISCRRGQAETLRFLLAHGGKVHMCDDLGRTPLHDACWAKEPVFDCISTILDADPELIRMVDCRGASPLAYIRRAHWREWKEFFDSKKEKYW 465 SPQ +L +L RGY T+ S + +F PTP Q+ YD+ L+N V+ L +++ M + G + C+K GES++H+ RRG E L +G + + D LGRT LHD WA +P FD + +L D +++ M D R PLA R+ HW++W +FF+ KK+ +W Sbjct: 95 SPQTYLDRLLSSRGYSTNRHDSSSCGYFNKPTPFQIASYDVNLVNLVRNRRLTEIEAMLKAGISANPCSKQGESLIHMIARRGDTELLNLFKKYGCRFEVADTLGRTLLHDVFWASQPAFDTVELLLREDIDMLFMNDSRQNPPLACARKEHWKQWIDFFEEKKDIFW 262
BLAST of NO12G01640 vs. NCBI_GenBank
Match: XP_002181991.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46531.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 146.7 bits (369), Expect = 2.200e-31 Identity = 70/187 (37.43%), Postives = 103/187 (55.08%), Query Frame = 0 Query: 296 ISPQEFLWGILQERGYETSPLFSKTQAFFRPPTPKQVEDYDIALLNAVKTGDLAQLQDMAQQGRQMDACNKYGESIVHISCRRGQAETLRFLLAHGGKVHMCDDLGRTPLHDACWAKEPVFDCISTILDADPELIRMVDCRGASPLAYIRRAHWREWKEFFDSKKEKYWAPLPGSSCETELIVRGAP 483 ++P E L +L+ RGY T AFF PTP Q+ YD L+ +K+ D +++++ G +ACN +GES++H +CR G +R G + + D GRT LHD CW P F S I+D PEL+ + DCRGA PL Y+R+ H+ W E+ D +KYW P S+ + +V+ P Sbjct: 89 VTPHEHLEVLLKARGYCTERYSVLQTAFFNRPTPLQLASYDTKLIQLIKSQDEQKVREILASGISPNACNIHGESLIHKACRLGYHRLVRAFTDFGADLAISDAQGRTLLHDTCWGARPSFQTFSLIVDRQPELLFLADCRGACPLEYVRKDHYVFWIEYLDQIADKYW-PSTQSTPKLSYLVKQEP 274
BLAST of NO12G01640 vs. NCBI_GenBank
Match: GAX24750.1 (hypothetical protein FisN_4Hu308 [Fistulifera solaris]) HSP 1 Score: 145.6 bits (366), Expect = 4.900e-31 Identity = 63/177 (35.59%), Postives = 97/177 (54.80%), Query Frame = 0 Query: 289 QTPSNHD-ISPQEFLWGILQERGYETSPLFSKTQAFFRPPTPKQVEDYDIALLNAVKTGDLAQLQDMAQQGRQMDACNKYGESIVHISCRRGQAETLRFLLAHGGKVHMCDDLGRTPLHDACWAKEPVFDCISTILDADPELIRMVDCRGASPLAYIRRAHWREWKEFFDSKKEKYW 465 +T SN + ++PQ ++ +L+ RGY T + ++ P+ Q Y+I L+ ++ D+ Q++ + G + CN+Y ES+ H CR G + LL G DD GRTPLHDACWA EP F + IL D + M+D RG PL Y+R+ H+ +W F + ++KYW Sbjct: 83 KTDSNDNLLNPQAYMDAMLRYRGYSTKRYPTLQSGYYNTPSSHQRASYNIHLIGLIRRHDVENFQELMRAGLSSNPCNQYNESVAHTVCRHGSKPMMDVLLERGCDFRTADDYGRTPLHDACWAAEPAFPVVEEILKFDVRMFHMIDARGHCPLNYVRKEHYGDWIAFLEKNQDKYW 259
BLAST of NO12G01640 vs. NCBI_GenBank
Match: GAX24751.1 (hypothetical protein FisN_4Hu309 [Fistulifera solaris]) HSP 1 Score: 145.6 bits (366), Expect = 4.900e-31 Identity = 60/169 (35.50%), Postives = 92/169 (54.44%), Query Frame = 0 Query: 296 ISPQEFLWGILQERGYETSPLFSKTQAFFRPPTPKQVEDYDIALLNAVKTGDLAQLQDMAQQGRQMDACNKYGESIVHISCRRGQAETLRFLLAHGGKVHMCDDLGRTPLHDACWAKEPVFDCISTILDADPELIRMVDCRGASPLAYIRRAHWREWKEFFDSKKEKYW 465 ++PQ ++ +L+ RGY T + ++ P+P Q Y+I L+ ++ D+ Q++ + G + CN+Y ES+ H CR G + LL G DD GRTPLHDACWA EP F + IL D + M+D RG PL Y+R+ H+ +W F + ++YW Sbjct: 91 MNPQAYMDAMLRYRGYSTKRYHTLQSGYYNKPSPHQRASYNIHLIGLIRRRDVENFQELMRAGLSSNPCNQYSESVAHTVCRHGSKPMMDVLLERGCDFRTADDYGRTPLHDACWAAEPAFGVVEEILKFDIRMFHMIDARGHCPLNYVRKEHYGDWIAFIEQNADRYW 259
BLAST of NO12G01640 vs. NCBI_GenBank
Match: GAX19140.1 (hypothetical protein FisN_3Lh082 [Fistulifera solaris]) HSP 1 Score: 144.1 bits (362), Expect = 1.400e-30 Identity = 66/168 (39.29%), Postives = 98/168 (58.33%), Query Frame = 0 Query: 297 SPQEFLWGILQERGYETSPLFSKTQAFFRPPTPKQVEDYDIALLNAVKTGDLAQLQDMAQQGRQMDACNKYGESIVHISCRRGQAETLRFLLAHGGKVHMCDDLGRTPLHDACWAKEPVFDCISTILDADPELIRMVDCRGASPLAYIRRAHWREWKEFFDSKKEKYW 465 SPQ +L +L RGY T+ S + +F PT Q+ +D+ L+N V+ L +++ M + G + C+K GES++H+ RRG E L +G + + D LGR LHDA WA +P FD + +L D ++I M D R PLA R+ HW+EW EFF+ KK+ +W Sbjct: 95 SPQTYLDRLLTSRGYSTNRHDSSSCGYFNKPTAFQIASFDVNLVNLVRNRRLNEIEAMLKAGISANPCSKEGESLIHMIARRGDTEMLNLFKKYGCRFEVADMLGRNLLHDAFWASQPAFDTVELLLREDIDMIFMNDSRQNPPLACARKEHWKEWIEFFEKKKDIFW 262
BLAST of NO12G01640 vs. NCBI_GenBank
Match: GAX22247.1 (hypothetical protein FisN_19Lh317 [Fistulifera solaris]) HSP 1 Score: 142.9 bits (359), Expect = 3.200e-30 Identity = 63/174 (36.21%), Postives = 96/174 (55.17%), Query Frame = 0 Query: 291 PSNHDISPQEFLWGILQERGYETSPLFSKTQAFFRPPTPKQVEDYDIALLNAVKTGDLAQLQDMAQQGRQMDACNKYGESIVHISCRRGQAETLRFLLAHGGKVHMCDDLGRTPLHDACWAKEPVFDCISTILDADPELIRMVDCRGASPLAYIRRAHWREWKEFFDSKKEKYW 465 P +++ +PQ +L +L+ERGYE ++ PT Q+ Y L++ VK + + D+ G + CN++G S++ I+CRRG E L +L HG + + D+ GRTPLH+A +AK+P F + IL DP LI M D RG Y+R+ H EW F D ++ W Sbjct: 97 PESNETTPQRYLDELLKERGYEKERYDCLKTGYYNAPTKLQIASYHAHLVSLVKQNSIETIADILACGLSPNPCNEFGSSLLQIACRRGNVELLEIMLRHGCSLQVADEFGRTPLHNALYAKQPAFALVKRILQVDPHLINMADSRGHLAFDYVRKEHCDEWIAFLDKVVDEIW 270
BLAST of NO12G01640 vs. NCBI_GenBank
Match: XP_002183704.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44886.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 142.5 bits (358), Expect = 4.200e-30 Identity = 66/165 (40.00%), Postives = 95/165 (57.58%), Query Frame = 0 Query: 297 SPQEFLWGILQERGYETSP-LFSKTQAFFRPPTPKQVEDYDIALLNAVKTGDLAQLQDMAQQGRQMDACNKYGESIVHISCRRGQAETLRFLLAHGGKVHMCDDLGRTPLHDACWAKEPVFDCISTILDADPELIRMVDCRGASPLAYIRRAHWREWKEFFDSKK 461 +P E L IL + G P + ++FF P+ + Y++ L++AV+ +L L + + CN++GESIVH++ RRG E LRFL+A G V +C D GR PLHD CW+ P F+CI ILD P+L+ + D RG +PL Y R W EW +F D + Sbjct: 151 NPNEKLQEILCQEGVSALPRKYDSLESFFVKVLPEMIHAYEMKLVHAVRDNNLDALFLLLDTVKSFQCCNRFGESIVHLASRRGSTEALRFLVAQGVDVRVCCDSGRNPLHDGCWSSRPNFECIQVILDEFPDLLLIQDRRGFTPLQYAPRDSWGEWNQFLDGNR 315
BLAST of NO12G01640 vs. NCBI_GenBank
Match: CBN77924.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 130.6 bits (327), Expect = 1.600e-26 Identity = 57/128 (44.53%), Postives = 84/128 (65.62%), Query Frame = 0 Query: 309 RGYETSPLFSKTQAFFRPPTPKQVEDYDIALLNAVKTGDLAQLQDMAQQGRQMDACNKYGESIVHISCRRGQAETLRFLLAHGGKVHMCDDLGRTPLHDACWAKEPVFDCISTILDADPELIRMVDCR 437 +GY+++P S + PT KQ++DY + L+ AV+ D+ L+ +A G M A N++GESIVH++ RRG LRFLL+HGG + +CDD G+TPLHDA W EP F+ ++ +L+ D L+R D R Sbjct: 5 KGYDSTPRSSASDGCRCTPTQKQLDDYQVPLVEAVRRWDMGALEALAADGVDMGASNRFGESIVHLATRRGSTPVLRFLLSHGGSLRICDDYGKTPLHDAFWTAEPRFELVAMMLEMDWGLLRATDAR 132
BLAST of NO12G01640 vs. NCBI_GenBank
Match: GAX12083.1 (hypothetical protein FisN_8Lh188 [Fistulifera solaris]) HSP 1 Score: 129.4 bits (324), Expect = 3.600e-26 Identity = 65/172 (37.79%), Postives = 97/172 (56.40%), Query Frame = 0 Query: 287 RAQTPSNHDISPQEFLWGILQERG--YETSPLFSKTQAFFRPPTPKQVEDYDIALLNAVKTGDLAQLQDMAQQGRQMDACNKYGESIVHISCRRGQAETLRFLLAHGG-KVHMCDDLGRTPLHDACWAKEPVFDCISTILDADPELIRMVDCRGASPLAYIRRAHWREWKEF 456 R+ P+N P L ++++ G YET + + FF T V+ Y++ ++ A++ DL L+D GRQ+ NK+G+SI+H +CRRG E ++FLL G +C D GRT LHDACW P F I +LDA P+L+ D RG +PL Y R A + +W ++ Sbjct: 153 RSSAPTNTAPKPDSVLKAMIEQAGYVYETFEALN-MKGFFVEVTEDVVKAYEMDVIKALRENDLQTLRDFYNAGRQLQCANKFGDSIIHTACRRGCLEIVQFLLKEAGLSCKVCCDYGRTSLHDACWTSSPNFQVIDELLDACPDLLYTKDKRGFTPLDYARPAQYGDWCKY 323 The following BLAST results are available for this feature:
BLAST of NO12G01640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G01640 ID=NO12G01640|Name=NO12G01640|organism=Nannochloropsis oceanica|type=gene|length=1770bpback to top protein sequence of NO12G01640.1 >NO12G01640.1-protein ID=NO12G01640.1-protein|Name=NO12G01640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=590bpback to top Synonyms
Publications
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