NO12G01430, NO12G01430 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G01430
Unique Name	NO12G01430
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	5235
Alignment location	chr12:442113..447347 -

Link to JBrowse

Properties


Property Name	Value
Description	Atp dependent rna helicase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:442113..447347 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0005524	ATP binding
GO:0016787	hydrolase activity
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR014014	RNA_helicase_DEAD_Q_motif
IPR011545	DEAD/DEAH_box_helicase_dom
IPR001650	Helicase_C
IPR014001	Helicase_ATP-bd

Homology

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BLAST of NO12G01430 vs. NCBI_GenBank
Match: EWM25876.1 (atp dependent rna helicase [Nannochloropsis gaditana])

HSP 1 Score: 856.3 bits (2211), Expect = 7.500e-245
Identity = 507/592 (85.64%), Postives = 532/592 (89.86%), Query Frame = 0

Query:   68 GRYVPPALR---GAASGDDSTASVPSIHADGGAGDTSHENGHNDIPDAIHPAAGAHQRQQQPLRYPHSLHPQQPNMGDYRSGAPPPSYGGGGXXXXXXXXXXXXXXXXXXXXXXXXXWXXXXXXXXXXXXXXXXXXXXXXXXXXXARVNAQGFHGDERPNKQLEDQLFRKPHAQTTGINFDKYDDIPVETSGEGCPEPITSFTEEMVGAQMMTNLAFCNYTKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPQGGRNTGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLMERDRISLQSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDARQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHFLVTFLSQCDDSGLILIFVERKRDADYLEGVLYKQGFPSASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIXXXXXXXXXXXXLSLMNEKNKNIARELFDLLSENGHDIPRFLEDMAYS 657
            G+YVPPALR   GA + +    S+  + A G     S    +++  +AIHP +GAHQR QQ   YP +  P  P MGDYR      SYGG       XXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXX    +QGFHGD RP+K+LE+QLFR+PHAQTTGINFDKYDDIPVETSGEGCPEPI SFTE+MVG Q+MTNLA CNY+KPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPP+GGR++GRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDL+ERDRISL SIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTD RQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIH+LVTFLSQCDDSGLILIFVERKRDADYLEG+LYKQGFP ASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIXXXXXXXXXXXXLSLMNEKNKNIARELFDLLSENGHDIPRFLEDMAYS
Sbjct:   22 GKYVPPALRGESGAENDETPPTSLTEVKAGGMDHSESSSANNHEPSEAIHPTSGAHQRHQQMPPYPQNTPPSGP-MGDYRGS----SYGG-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQGFHGDLRPDKRLEEQLFRRPHAQTTGINFDKYDDIPVETSGEGCPEPIASFTEDMVGPQLMTNLALCNYSKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPRGGRSSGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLIERDRISLLSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTD-RQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHYLVTFLSQCDDSGLILIFVERKRDADYLEGLLYKQGFPCASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIXXXXXXXXXXXXLSLMNEKNKNIARELFDLLSENGHDIPRFLEDMAYS 600

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BLAST of NO12G01430 vs. NCBI_GenBank
Match: POM78046.1 (DEAD/DEAH box RNA helicase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 638.6 bits (1646), Expect = 2.500e-179
Identity = 323/447 (72.26%), Postives = 378/447 (84.56%), Query Frame = 0

Query:  210 ARVNAQGFHGDERPNKQLEDQLFRKPHAQTTGINFDKYDDIPVETSGEGCPEPITSFTEEMVGAQMMTNLAFCNYTKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPQGGRNTGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLMERDRISLQSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDARQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHFLVTFLSQCDDSGLILIFVERKRDADYLEGVLYKQGFPSASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIXXXXXXXXXXXXLSLMNEKNKNIARELFDLLSENGHDIPRFLEDMAYS 657
            ARVN  G+HGD RPN++LE +LF    A+++GINFDKYDDIPVETSGE  PEP+T F+ + +G +++ NL  C Y+KPTPVQKYS+PIGLA RD+MACAQTGSGKT GFLFPT+ +MLR GA  PP  G    RK++P AL+L+PTRELASQI DEA+KFCYCTG+ PVVIYGGAEV  QLRELERGCDLLVATPGRLVDLMER RISL  IRFLILDEADRMLDMGFEP IRRIVEQE MP + RQTFMFSATFPR+IQRLA+DF++DYIFL VGRVGSASKDV Q +EY+E +DK  +LV FL+Q  D GLIL+FVE KR AD+LE +L ++GFP+ SIHGD++QRERE+AL  FK+G+ PVLVATDVAARGLDI  VTQVIN+DLPNNIDDYVHRI XXXXXXXXX  LS+MNEKN+NIARE++DL++ENG +IP FL+ MA S
Sbjct:  112 ARVNEMGYHGDTRPNERLEHELF--GDAKSSGINFDKYDDIPVETSGENVPEPVTEFSVDELGPEVVRNLDLCKYSKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGATPPPDVGHGRSRKIFPAALILSPTRELASQIHDEAKKFCYCTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPVIRRIVEQEDMPRE-RQTFMFSATFPREIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQD-GLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGXXXXXXXXXYALSMMNEKNRNIAREMYDLMAENGQEIPAFLDQMANS 554

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BLAST of NO12G01430 vs. NCBI_GenBank
Match: ETI33809.1 (hypothetical protein F443_19561 [Phytophthora parasitica P1569] >ETM34048.1 hypothetical protein L914_18795 [Phytophthora parasitica] >ETP31857.1 hypothetical protein F442_19333 [Phytophthora parasitica P10297])

HSP 1 Score: 636.0 bits (1639), Expect = 1.600e-178
Identity = 322/445 (72.36%), Postives = 375/445 (84.27%), Query Frame = 0

Query:  212 VNAQGFHGDERPNKQLEDQLFRKPHAQTTGINFDKYDDIPVETSGEGCPEPITSFTEEMVGAQMMTNLAFCNYTKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPQGGRNTGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLMERDRISLQSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDARQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHFLVTFLSQCDDSGLILIFVERKRDADYLEGVLYKQGFPSASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIXXXXXXXXXXXXLSLMNEKNKNIARELFDLLSENGHDIPRFLEDMAYS 657
            VN  G+HGD R N++LE +LF    A+++GINFDKYDDIPVETSGE  PEP+T F+EE +G +++ NL  C YTKPTPVQKYS+PIGLA RD+MACAQTGSGKT GFLFPT+ +MLR G   PP  G    RK++P  L+L+PTRELASQI DEA+KFCYCTG+ PVVIYGGAEV  QLRELERGCDLLVATPGRLVDLMER RISL  IRFLILDEADRMLDMGFEPQIRRIVEQE MP + RQTFMFSATFPR+IQRLA+DF++DYIFL VGRVGSASKDV Q +EY+E +DK  +LV FL+Q  D GLIL+FVE KR AD+LE +L ++GFP+ SIHGD++QRERE+AL  FK+G+ PVLVATDVAARGLDI  VTQVIN+DLPNNIDDYVHRI XXXXXXXXX  LS+MNEKN+NIARE+++L+SENG +IP FL+ MA S
Sbjct:  113 VNELGYHGDLRRNERLEHELF--GDAKSSGINFDKYDDIPVETSGENVPEPVTEFSEEQLGPEVIRNLELCKYTKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTPPPDVGHGRSRKIFPAGLILSPTRELASQIHDEAKKFCYCTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPQIRRIVEQEDMPRE-RQTFMFSATFPREIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQD-GLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGXXXXXXXXXYALSMMNEKNRNIAREMYELMSENGQEIPAFLDQMANS 553

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BLAST of NO12G01430 vs. NCBI_GenBank
Match: ETK74179.1 (hypothetical protein L915_18980 [Phytophthora parasitica] >ETL27609.1 hypothetical protein L916_18878 [Phytophthora parasitica] >ETP03708.1 hypothetical protein F441_19382 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 636.0 bits (1639), Expect = 1.600e-178
Identity = 322/445 (72.36%), Postives = 375/445 (84.27%), Query Frame = 0

Query:  212 VNAQGFHGDERPNKQLEDQLFRKPHAQTTGINFDKYDDIPVETSGEGCPEPITSFTEEMVGAQMMTNLAFCNYTKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPQGGRNTGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLMERDRISLQSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDARQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHFLVTFLSQCDDSGLILIFVERKRDADYLEGVLYKQGFPSASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIXXXXXXXXXXXXLSLMNEKNKNIARELFDLLSENGHDIPRFLEDMAYS 657
            VN  G+HGD R N++LE +LF    A+++GINFDKYDDIPVETSGE  PEP+T F+EE +G +++ NL  C YTKPTPVQKYS+PIGLA RD+MACAQTGSGKT GFLFPT+ +MLR G   PP  G    RK++P  L+L+PTRELASQI DEA+KFCYCTG+ PVVIYGGAEV  QLRELERGCDLLVATPGRLVDLMER RISL  IRFLILDEADRMLDMGFEPQIRRIVEQE MP + RQTFMFSATFPR+IQRLA+DF++DYIFL VGRVGSASKDV Q +EY+E +DK  +LV FL+Q  D GLIL+FVE KR AD+LE +L ++GFP+ SIHGD++QRERE+AL  FK+G+ PVLVATDVAARGLDI  VTQVIN+DLPNNIDDYVHRI XXXXXXXXX  LS+MNEKN+NIARE+++L+SENG +IP FL+ MA S
Sbjct:  113 VNELGYHGDLRRNERLEHELF--GDAKSSGINFDKYDDIPVETSGENVPEPVTEFSEEQLGPEVIRNLELCKYTKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTPPPDVGHGRSRKIFPAGLILSPTRELASQIHDEAKKFCYCTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPQIRRIVEQEDMPRE-RQTFMFSATFPREIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQD-GLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGXXXXXXXXXYALSMMNEKNRNIAREMYELMSENGQEIPAFLDQMANS 553

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BLAST of NO12G01430 vs. NCBI_GenBank
Match: XP_008897471.1 (hypothetical protein PPTG_05621 [Phytophthora parasitica INRA-310] >ETL80844.1 hypothetical protein L917_18705 [Phytophthora parasitica] >ETN17975.1 hypothetical protein PPTG_05621 [Phytophthora parasitica INRA-310])

HSP 1 Score: 636.0 bits (1639), Expect = 1.600e-178
Identity = 322/445 (72.36%), Postives = 375/445 (84.27%), Query Frame = 0

Query:  212 VNAQGFHGDERPNKQLEDQLFRKPHAQTTGINFDKYDDIPVETSGEGCPEPITSFTEEMVGAQMMTNLAFCNYTKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPQGGRNTGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLMERDRISLQSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDARQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHFLVTFLSQCDDSGLILIFVERKRDADYLEGVLYKQGFPSASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIXXXXXXXXXXXXLSLMNEKNKNIARELFDLLSENGHDIPRFLEDMAYS 657
            VN  G+HGD R N++LE +LF    A+++GINFDKYDDIPVETSGE  PEP+T F+EE +G +++ NL  C YTKPTPVQKYS+PIGLA RD+MACAQTGSGKT GFLFPT+ +MLR G   PP  G    RK++P  L+L+PTRELASQI DEA+KFCYCTG+ PVVIYGGAEV  QLRELERGCDLLVATPGRLVDLMER RISL  IRFLILDEADRMLDMGFEPQIRRIVEQE MP + RQTFMFSATFPR+IQRLA+DF++DYIFL VGRVGSASKDV Q +EY+E +DK  +LV FL+Q  D GLIL+FVE KR AD+LE +L ++GFP+ SIHGD++QRERE+AL  FK+G+ PVLVATDVAARGLDI  VTQVIN+DLPNNIDDYVHRI XXXXXXXXX  LS+MNEKN+NIARE+++L+SENG +IP FL+ MA S
Sbjct:  113 VNELGYHGDLRRNERLEHELF--GDAKSSGINFDKYDDIPVETSGENVPEPVTEFSEEQLGPEVIRNLELCKYTKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTPPPDVGHGRSRKIFPAGLILSPTRELASQIHDEAKKFCYCTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPQIRRIVEQEDMPRE-RQTFMFSATFPREIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQD-GLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGXXXXXXXXXYALSMMNEKNRNIAREMYELMSENGQEIPAFLDQMANS 553

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BLAST of NO12G01430 vs. NCBI_GenBank
Match: KUG01383.1 (ATP-dependent RNA helicase ded1 [Phytophthora nicotianae])

HSP 1 Score: 636.0 bits (1639), Expect = 1.600e-178
Identity = 322/445 (72.36%), Postives = 375/445 (84.27%), Query Frame = 0

Query:  212 VNAQGFHGDERPNKQLEDQLFRKPHAQTTGINFDKYDDIPVETSGEGCPEPITSFTEEMVGAQMMTNLAFCNYTKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPQGGRNTGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLMERDRISLQSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDARQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHFLVTFLSQCDDSGLILIFVERKRDADYLEGVLYKQGFPSASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIXXXXXXXXXXXXLSLMNEKNKNIARELFDLLSENGHDIPRFLEDMAYS 657
            VN  G+HGD R N++LE +LF    A+++GINFDKYDDIPVETSGE  PEP+T F+EE +G +++ NL  C YTKPTPVQKYS+PIGLA RD+MACAQTGSGKT GFLFPT+ +MLR G   PP  G    RK++P  L+L+PTRELASQI DEA+KFCYCTG+ PVVIYGGAEV  QLRELERGCDLLVATPGRLVDLMER RISL  IRFLILDEADRMLDMGFEPQIRRIVEQE MP + RQTFMFSATFPR+IQRLA+DF++DYIFL VGRVGSASKDV Q +EY+E +DK  +LV FL+Q  D GLIL+FVE KR AD+LE +L ++GFP+ SIHGD++QRERE+AL  FK+G+ PVLVATDVAARGLDI  VTQVIN+DLPNNIDDYVHRI XXXXXXXXX  LS+MNEKN+NIARE+++L+SENG +IP FL+ MA S
Sbjct:   45 VNELGYHGDLRRNERLEHELF--GDAKSSGINFDKYDDIPVETSGENVPEPVTEFSEEQLGPEVIRNLELCKYTKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTPPPDVGHGRSRKIFPAGLILSPTRELASQIHDEAKKFCYCTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPQIRRIVEQEDMPRE-RQTFMFSATFPREIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQD-GLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGXXXXXXXXXYALSMMNEKNRNIAREMYELMSENGQEIPAFLDQMANS 485

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BLAST of NO12G01430 vs. NCBI_GenBank
Match: ETO62635.1 (hypothetical protein F444_19513 [Phytophthora parasitica P1976])

HSP 1 Score: 632.1 bits (1629), Expect = 2.300e-177
Identity = 321/445 (72.13%), Postives = 374/445 (84.04%), Query Frame = 0

Query:  212 VNAQGFHGDERPNKQLEDQLFRKPHAQTTGINFDKYDDIPVETSGEGCPEPITSFTEEMVGAQMMTNLAFCNYTKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPQGGRNTGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLMERDRISLQSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDARQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHFLVTFLSQCDDSGLILIFVERKRDADYLEGVLYKQGFPSASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIXXXXXXXXXXXXLSLMNEKNKNIARELFDLLSENGHDIPRFLEDMAYS 657
            VN  G+HGD R N++LE +LF    A+++GINFDKYDDIPVETSGE  PEP+T F+EE +G +++ NL  C YTKPTPVQKYS+PIGLA RD+MACAQTGSGKT GFLFPT+ +MLR G   PP  G    RK++P  L+L+PTRELASQI DEA+KFCY TG+ PVVIYGGAEV  QLRELERGCDLLVATPGRLVDLMER RISL  IRFLILDEADRMLDMGFEPQIRRIVEQE MP + RQTFMFSATFPR+IQRLA+DF++DYIFL VGRVGSASKDV Q +EY+E +DK  +LV FL+Q  D GLIL+FVE KR AD+LE +L ++GFP+ SIHGD++QRERE+AL  FK+G+ PVLVATDVAARGLDI  VTQVIN+DLPNNIDDYVHRI XXXXXXXXX  LS+MNEKN+NIARE+++L+SENG +IP FL+ MA S
Sbjct:  113 VNELGYHGDLRRNERLEHELF--GDAKSSGINFDKYDDIPVETSGENVPEPVTEFSEEQLGPEVIRNLELCKYTKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTPPPDVGHGRSRKIFPAGLILSPTRELASQIHDEAKKFCYSTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPQIRRIVEQEDMPRE-RQTFMFSATFPREIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQD-GLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGXXXXXXXXXYALSMMNEKNRNIAREMYELMSENGQEIPAFLDQMANS 553

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BLAST of NO12G01430 vs. NCBI_GenBank
Match: XP_002907739.1 (DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4] >EEY64303.1 DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 630.9 bits (1626), Expect = 5.100e-177
Identity = 319/446 (71.52%), Postives = 374/446 (83.86%), Query Frame = 0

Query:  211 RVNAQGFHGDERPNKQLEDQLFRKPHAQTTGINFDKYDDIPVETSGEGCPEPITSFTEEMVGAQMMTNLAFCNYTKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPQGGRNTGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLMERDRISLQSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDARQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHFLVTFLSQCDDSGLILIFVERKRDADYLEGVLYKQGFPSASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIXXXXXXXXXXXXLSLMNEKNKNIARELFDLLSENGHDIPRFLEDMAYS 657
            RVN  G+HGD R N++LE +LF    A+++GINFDKYDDIPVETSGE  P+P+T F EE +G +++ NL  C Y+KPTPVQKYS+PIGLA RD+MACAQTGSGKT GFLFPT+ +MLR G   PP  G    RK++P  L+L+PTRELASQI DEA+KFCYCTG+ PVVIYGGAEV  QLRELERGCDLLVATPGRLVDLMER RISL  IRFLILDEADRMLDMGFEPQIRRIVEQE MP + RQTFMFSATFP +IQRLA+DF++DYIFL VGRVGSASKDV Q +EY+E +DK  +LV FL+Q  D GLIL+FVE KR AD+LE +L ++GFP+ SIHGD++QRERE+AL  FK+G+ PVLVATDVAARGLDI  VTQVIN+DLPNNIDDYVHRI XXXXXXXXX  LS+MNEKN+NIARE+++L++ENG +IP FL+ MA S
Sbjct:  113 RVNELGYHGDVRRNERLEHELF--GDAKSSGINFDKYDDIPVETSGENVPDPVTEFAEEQLGPEVIRNLELCKYSKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTPPPDVGHGRSRKIFPAGLILSPTRELASQIHDEAKKFCYCTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPQIRRIVEQEDMPRE-RQTFMFSATFPCEIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQD-GLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGXXXXXXXXXYALSMMNEKNRNIAREMYELMAENGQEIPAFLDQMASS 554

[Close]

BLAST of NO12G01430 vs. NCBI_GenBank
Match: GAX94414.1 (DEAD/DEAH box RNA helicase putative [Pythium insidiosum])

HSP 1 Score: 629.0 bits (1621), Expect = 2.000e-176
Identity = 327/444 (73.65%), Postives = 383/444 (86.26%), Query Frame = 0

Query:  211 RVNAQGFHGDERPNKQLEDQLFRKPHAQTTGINFDKYDDIPVETSGEGCPEPITSFTEEMVGAQMMTNLAFCNYTKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPE-PPQGGRNTGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLMERDRISLQSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDARQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHFLVTFLSQCDDSGLILIFVERKRDADYLEGVLYKQGFPSASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIXXXXXXXXXXXXLSLMNEKNKNIARELFDLLSENGHDIPRFLEDM 654
            R N  G+HGD R N++LE +LF   +A+++GINFDKYDDIPVETSGE  PEP+++F+EE +G +++ NL  C Y KPTPVQKYS+PIG+A RD+MACAQTGSGKT GFLFPT+ +MLR    E PP GGR+  RKVYP ALVLAPTRELASQI+DEA+KFCYCTG+ PVVIYGGAEV  QLR+LERG DLLVATPGRLVDLMER RISL  IRFLILDEADRMLDMGFEPQIRRIVE+E MP + RQTFM SATFPR+IQRLA+DF++DYIFL VGRVGSASKDV Q++EYVE  DK  +++ FL+Q  D GLILIFVE KR AD+LE +L ++GFP+ASIHGD+TQRERE ALH FK+G+ PVLVATDVAARGLDI+ VTQVIN+D+PNNIDDYVHRIXXXXXXXXXXXXLSLMNEKN+NIAREL++LL ENGH+ PR+L++M
Sbjct:  101 RRNELGYHGDLRRNERLEHELF--ANAKSSGINFDKYDDIPVETSGENVPEPVSTFSEEFLGPEVVRNLELCKYDKPTPVQKYSIPIGVAGRDMMACAQTGSGKTGGFLFPTLAAMLRAAPVEAPPTGGRS--RKVYPTALVLAPTRELASQIYDEARKFCYCTGIAPVVIYGGAEVGRQLRDLERGXDLLVATPGRLVDLMERGRISLAGIRFLILDEADRMLDMGFEPQIRRIVEEEXMPRE-RQTFMXSATFPREIQRLASDFLQDYIFLTVGRVGSASKDVKQQVEYVEQRDKEDYVIRFLNQVQD-GLILIFVETKRGADFLEDLLCREGFPAASIHGDRTQREREAALHSFKSGRTPVLVATDVAARGLDINGVTQVINFDMPNNIDDYVHRIXXXXXXXXXXXXLSLMNEKNRNIARELYELLVENGHECPRWLDEM 538

[Close]

BLAST of NO12G01430 vs. NCBI_GenBank
Match: XP_024582602.1 (dead deah box rna [Plasmopara halstedii] >CEG46233.1 dead deah box rna [Plasmopara halstedii])

HSP 1 Score: 627.5 bits (1617), Expect = 5.700e-176
Identity = 317/444 (71.40%), Postives = 372/444 (83.78%), Query Frame = 0

Query:  213 NAQGFHGDERPNKQLEDQLFRKPHAQTTGINFDKYDDIPVETSGEGCPEPITSFTEEMVGAQMMTNLAFCNYTKPTPVQKYSVPIGLADRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPQGGRNTGRKVYPMALVLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLMERDRISLQSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDARQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHFLVTFLSQCDDSGLILIFVERKRDADYLEGVLYKQGFPSASIHGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIXXXXXXXXXXXXLSLMNEKNKNIARELFDLLSENGHDIPRFLEDMAYS 657
            N  G+HGD R N++LE +LF    A+++GINFDKYDDIPVETSGE  P+P+  F+EE +G +++ NL  C Y KPTPVQKYS+PIGLA RD+MACAQTGSGKT GFLFPT+ +MLR G   PP  G    RK++P  L+L+PTRELASQI DEA+KFCYCTG+ PVVIYGGAEV  QLRELERGCDLLVATPGRLVDLMER RISL  IRFLILDEADRMLDMGFEPQIRRIVEQE MP + RQTFMFSATFPR+IQRLA+DF++DYIFL VGRVGSASKDV Q +EY+E +DK  +LV FL+Q  D GLIL+FVE KR AD+LE +L ++GFP+ SIHGD++QRERE+AL  FK+G+ PVLVATDVAARGLDI  VTQVIN+DLPNNIDDYVHRI XXXXXXXXX  LS+MNEKN+NIARE+++L++ENG +IP FL+ MA S
Sbjct:  109 NELGYHGDVRRNERLEHELF--GDAKSSGINFDKYDDIPVETSGENVPDPVNDFSEEQLGPEVIRNLELCKYAKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTPPPDVGHGRTRKIFPAGLILSPTRELASQIHDEAKKFCYCTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPQIRRIVEQEDMPRE-RQTFMFSATFPREIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQD-GLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRIGXXXXXXXXXYALSMMNEKNRNIAREMYELMAENGQEIPAFLDQMANS 548

The following BLAST results are available for this feature:

BLAST of NO12G01430 vs. NCBI_GenBank

BLAST of NO12G01430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM25876.1	7.500e-245	85.64	atp dependent rna helicase [Nannochloropsis gadita...	[more]
POM78046.1	2.500e-179	72.26	DEAD/DEAH box RNA helicase [Phytophthora palmivora...	[more]
ETI33809.1	1.600e-178	72.36	hypothetical protein F443_19561 [Phytophthora para...	[more]
ETK74179.1	1.600e-178	72.36	hypothetical protein L915_18980 [Phytophthora para...	[more]
XP_008897471.1	1.600e-178	72.36	hypothetical protein PPTG_05621 [Phytophthora para...	[more]
KUG01383.1	1.600e-178	72.36	ATP-dependent RNA helicase ded1 [Phytophthora nico...	[more]
ETO62635.1	2.300e-177	72.13	hypothetical protein F444_19513 [Phytophthora para...	[more]
XP_002907739.1	5.100e-177	71.52	DEAD/DEAH box RNA helicase, putative [Phytophthora...	[more]
GAX94414.1	2.000e-176	73.65	DEAD/DEAH box RNA helicase putative [Pythium insid...	[more]
XP_024582602.1	5.700e-176	71.40	dead deah box rna [Plasmopara halstedii] >CEG46233...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL124	nonsL124	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR014	ncniR014	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR006	ngnoR006	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK010066	NSK010066	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO12G01430.2	NO12G01430.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide
NO12G01430.1	NO12G01430.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|566528	gene_5303	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100054g8	gene4635	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO12G01430.2	NO12G01430.2	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA
NO12G01430.1	NO12G01430.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence
protein sequence

gene sequence

>NO12G01430 ID=NO12G01430|Name=NO12G01430|organism=Nannochloropsis oceanica|type=gene|length=5235bp
CAGGAAAGACAATTAGGCTATAAGAGGCAAGTCCTGCGATGCAACATGgt
aagtgtataaccgtgcctaagctgatgtacgcctccatttttctaccgcc
tacccttttattgctttggtgtatgtgcgcggtcttgcacgatacaagat
gatgaaagggtagttggctatacatttgaaattcattgtgctttttcgac
agctaacgccccttgtatgtgctagGGGCGAAAAGCATTTCACCAAAGGG
AGCAGCACTAGGGACGCGCGGTTATGTGAGGCATGACGCTAGCGTTGTAT
TGGGTGGATAAATCACAATGTGTACATGTGTGGGCAATTGTGCCTGCCCT
AGGGGGGATGATAAGCTTGGAGGCATGGCTTGTTATGGTGGGAGAGAAAT
AGATGGGCAGTGGTACCAGAGCAGCACCTCCCTCATCGATTACACCGCGC
CCAGCGAAAGTCTTGATAACAATGCATTCGCTTATCCCTTCCTCTTCCTC
TATCCTCACGCACGCAAAGGTAGGTACGTTCCCCCGGCTTTAAGAGGAGC
AGCGAGTGGTGACGACAGTACGGCTTCTGTGCCTTCCATCCACGCAGACG
GAGGAGCAGGTGACACCAGCCACGAGAACGGCCACAACGACATCCCCGAC
GCGATCCACCCGGCGGCAGGTGCGCACCAGCGACAGCAGCAGCCTCTGCG
CTACCCCCACAGCTTGCACCCGCAACAACCTAACATGGGAGATTATCGAA
GTGGTGCCCCCCCCCCTTCCTATGGCGGAGGAGGAGGGTATGGTGGAGGA
GGATATGGTGGAGGAGGAGGATATGGAGGGGGAGGAGGGCGAGGGGGAAG
TCGAGGTGGCTGGGATCAAGGAGGAGGGTCGTATGGTCGTGGAGGAGGAG
GAGGGTATCGAGGTGGGAATGGAGGGGGGGGCTACTCGGGGTCTGCGCGA
GTGAATGCGCAGGGATTTCACGGGGACGAGCGCCCGAACAAGCAGTTGGA
GGACCAGCTGTTCCGCAAGCCGCACGCGCAGACTACAGGGATTAATTTCG
ATAAATATGACGATATTCCCGTGGAGACGAGTGGGGAAGGGTGCCCGGAA
CCGATCACGAGTTTTACTGAGGAGATGGTTGGGGCGCAGATGATGACGAA
TTTGGCGTTTTGCAACTACACCAAGCCCACGCCCGTGCAGAAGTATTCAG
TTCCCATTGGATTGGCGGATCGGGACTTGATGGCTTGTGCCCAGACGGGG
TCGGGGAAGACGGCGGGGTTTTTGTTTCCTACAATCGTGTCCATGTTGCG
ACAGGGTGCACCGGAGCCACCGCAGGGGGGGCGGAATACGGGAAGGAAGG
TGTACCCCATGGCGCTTGTGCTTGCACCGACGCGGGAGTTGGCAAGCCAG
ATTTTCGATGAGGCGCAAAAGTTTTGTTACTGTACGGGGGTGAGGCCTGT
CGTGATTTACGGAGGGGCGGAGGTGAGGAATCAGTTGAGGGAGCTGGAAC
GGGGGTGTGACTTACTCGTGGCGACGCCTGGGAGGTTGGTAGACCTGATG
GAGCGGGACCGGATCAGCCTGCAGAGCATTCGATTCCTGATCCTGGATGA
GGCGGATCGCATGCTTGACATGGGCTTTGAGCCGCAGATCCGGAGGATTG
TGGAGCAGGAAGGTATGCCGACGGACGCCAGGCAGACCTTCATGTTCAGT
GCGACGTTTCCCCGGGATATTCAACGGCTGGCGGCTGATTTCATGAAGGA
TTACATTTTCCTGGCGGTGGGGAGGGTGGGGTCGGCGAGTAAGGATGTGA
TCCAAAAGATTGAGTACGTGGAGATGCACGACAAGATCCATTTCCTTGTC
ACATTTTTGAGCCAGTGCGACGATTCGGGCCTGATTCTGATTTTCGTGGA
GCGGAAGCGCGATGCGGATTATCTTGAGGGCGTGTTGTATAAGCAGGGCT
TTCCATCGGCGAGTATCCATGGGGACAAGACGCAGAGGGAGCGGGAGGAG
GCGTTGCACTACTTTAAAACTGgtacgtagtggctttgggtctggggata
tgtgtgtacgtgtgtatctatgtcggtatcgtcccttatttgtatgcatg
cacgcttggagagtgcatgtcgtccttcccgccgcgccgtctcaccctcc
ctccctccctccttccccccccccccctttcgaaacacacagGCCAGTGC
CCTGTGCTCGTCGCCACAGACGTCGCGGCCCGTGGGCTGGACATCTCCAA
CGTGACTCAGGTGATCAACTACGACCTCCCTAACAATATCGACGACTACG
TGCACCGCATCGGACGTACCGGCCGTGTCGGCAACGTCGGGCACGCCCTG
TCGTTGATGAACGAGAAGAACAAGAACATTGCGCGGGAGCTCTTTGATCT
GCTCTCGGAGAATGGGCATGATATCCCCCGGTTCTTGGAGGACATGGCTT
ATTCTGGCGGAGGGGGCGGAGGGCGCAAGCCGCGAGGGGGAGGAAGGGGA
GGAGCGCGCTTCGGAGCGAGGGATTTCCGAAAAGACCGGGGAGGTGGGGG
AGGAGACGGCTACGATCGTGGAGGACGGGGGGGGGGTTATCAGGGGGGGT
ATGGCAGTGGAGGTGGAGGgtgagtagtgttcaaggaaacatagatgggg
gaagggtggctcagagggatggggagaggtaacagaggtattaacttggt
tccccttttcttcttatgggttcggtttcttgtttgtgatttctgtttcc
tcctcccttacctctctacttttgactcgatttcttatggctcaatccta
cttcctcctccgatcctcactcgtcctcgattcacagATATGGCGGCCAA
GGTGGTGGTTATAGCGGTGGCGGCGGAGGgtaagtgcatcgctccctaat
ttcacctccccctctttccctcacatgaattatttccatttgtggtatga
ctgatgggtccgttttcatacgagccctctgtcgctcacccccttctctc
ttcggtcacacacacaatcatacacaacacacgcacgcccataaagATAT
GGTGGAGGAGGGGGTTACTCCCAATCCTCCGGCTATGGCGGCGGTGGTGG
CAGgtgcgtgcatgagggcgttcgtgcctgcttgcgcgtgtttttttccg
ctttacttttactttaaatgtttcgcgtgctttgatgctatttgtctgga
tttttttgtgtacagcgagtcatctttccttgtccgtttgacattctgtc
caattatttgtgctttgataatattatcacccagtgcttttcctcgatct
ttgccatccccccccccccctgtccgtctcgtttctcaatcctcacaccc
acttatgttcttccccccccattcctctctccctcaaacgaaaccaaaat
agCTATGGCGGCGGTGGCGGCTACGGCGGCCCCCCCGCGACCGGGTATGG
TGGCCCGCCCTCCCGCGGCGGGGGAGGAGGGTATTCAGGTCCCCCTTCCT
ACGGCCGTCCGCCTTCTGATAATAGTGCCTGGTAAGGTGGAAAGGAGAAG
GAGGAGATGGTGCAGAATGATACGGAGATGGAGGAGGAGGAGGAAGAAGA
GAAGGAAGAGGAGGAATGAAATTGAGAAGGGTAGAGACATAATAGGGCTC
AAGACTAAGAACAAGAAGTAGGGGGAAAATAAGACAAAGGAACCAAAAAG
AGAGGGAGAGGAAGACAAGAGGAAGGCAAAGGAGGAGAAAGCAGAAGAGG
GACAGAGAAGAAAGCTCTTGCAGCACCACCATCACCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGTAGTAGTAGTAGTAGTACCAGCAGCTGTGGCAGGT
CGAAGTAGAAAGAAAAGGGTAAAGACGAGAAGATGGAAGTTTTCATGATT
TTGATTTGTCTGTGAAAGGTGTGTGCTTACCATCAGTATTCGCCGGCGCC
GTAAGAGAAATAGAGAAGGCAAGAGAAAACGAAGGAGGGAGAAGGGAGGG
TTATGAGATCACGAGCGAAACCTCACTCATTTTTTTAATCGTGAAATCTA
ATGCAAGTCCCGGAATACAGAGCTTTCGGGGCCGAGAGCGCTGTTATCGA
GACATAGAGTGTGAGAGTGAGAGAGTGGAAAATATTAAGTAATGCTAGGT
AGCAAGTGGTAGGTGCATCGCGTAAAATTGCCTGCCTTCGTGGTCTTTTT
AAATCATTAATCTGTCTCTCTTTCTGGCCGGCTGACGGTCGATTACCTGT
CTATTTCTCTTCATATAGGGTGTAACGGTAGATGTGTCTGGCCACATGCG
TGCGTGTGTGTGTGTTTTTGGAGTGTCAAGTAATCGATAGAGAGCAAGTA
GCTAGTGCATACAAACTCTCTTGATAGGAGAACAAACGTTTCTAAAGGGG
AAAGGGCATTTGCTTGTTTGGCTGCTGTTGTCATGGGCACCCGCCTATTT
CTTAGGGGTCTTTCACAACGATGGTGTACTGTTGGAGATCCTCCCGAGGC
CGCCTTTCGTTTTGTGGTTTTTGTTTTTCTTCACGTGCTTGCTGAAAAGC
AAGCACGTGAGAGAAAAAACATATGGATCAACAGGAGACATTAATGAACG
AAGACGGTTTAAATGATGAGGAAGGAATAGCAACAAGAACAAGAGAGAAG
GCTGATCCGCCGGCCTCCCTCCCTCCGTACTCCCCACCTCCGTGAAAGAA
AGACGGAATAGGGATAAGAGAGGGGTGTGAGGGGGGAAGAAGATGAAGAA
GACGAAGAAGACGGTGATTAGACACAAACGTTTGTATGATACAGTAGCAC
GACAAACACAGACGCCTAACAAAATGAGGTAAGAAATACGCGAATAGAGA
AAGAGATAAGAGTAAGGACATGAAGATGTAGTTTTTGCGCAGTCCGAGGC
AGATGGCACTCACGAGAGGAGCTTAATTCTATAAGGTGCACCTTTTCGCC
GCTCTCAAAGAGCCTCACAAAAATCACACGCACCCTCCGCGCTCCTCCCC
TGTTTCTTCCCTTCGCTTTGGGTTGAGAGGGGAGATAGAGAGGAGGGTTG
GAGAGAGGGAAAGAAATGGAAGGGAGAAAGTGAGCGTGGCTGACTCTCCA
TTTCCTCCCCTTTTTGAATCAAGACTTGAGGCTCCGGGCATTAGGTGTGA
AGGGCGATTTATCTCCTTATCACCGCAAGAAATATCAAGGGAGAGGAAAG
ACACGCTACATATACGATACGAGGCTGATGACGAC

protein sequence of NO12G01430.2

>NO12G01430.2-protein ID=NO12G01430.2-protein|Name=NO12G01430.2|organism=Nannochloropsis oceanica|type=polypeptide|length=788bp
MCTCVGNCACPRGDDKLGGMACYGGREIDGQWYQSSTSLIDYTAPSESLD
NNAFAYPFLFLYPHARKGRYVPPALRGAASGDDSTASVPSIHADGGAGDT
SHENGHNDIPDAIHPAAGAHQRQQQPLRYPHSLHPQQPNMGDYRSGAPPP
SYGGGGGYGGGGYGGGGGYGGGGGRGGSRGGWDQGGGSYGRGGGGGYRGG
NGGGGYSGSARVNAQGFHGDERPNKQLEDQLFRKPHAQTTGINFDKYDDI
PVETSGEGCPEPITSFTEEMVGAQMMTNLAFCNYTKPTPVQKYSVPIGLA
DRDLMACAQTGSGKTAGFLFPTIVSMLRQGAPEPPQGGRNTGRKVYPMAL
VLAPTRELASQIFDEAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLL
VATPGRLVDLMERDRISLQSIRFLILDEADRMLDMGFEPQIRRIVEQEGM
PTDARQTFMFSATFPRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEY
VEMHDKIHFLVTFLSQCDDSGLILIFVERKRDADYLEGVLYKQGFPSASI
HGDKTQREREEALHYFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNN
IDDYVHRIGRTGRVGNVGHALSLMNEKNKNIARELFDLLSENGHDIPRFL
EDMAYSGGGGGGRKPRGGGRGGARFGARDFRKDRGGGGGDGYDRGGRGGG
YQGGYGSGGGGYGGQGGGYSGGGGGYGGGGGYSQSSGYGGGGGSYGGGGG
YGGPPATGYGGPPSRGGGGGYSGPPSYGRPPSDNSAW*

protein sequence of NO12G01430.1

>NO12G01430.1-protein ID=NO12G01430.1-protein|Name=NO12G01430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=724bp
MQHGRYVPPALRGAASGDDSTASVPSIHADGGAGDTSHENGHNDIPDAIH
PAAGAHQRQQQPLRYPHSLHPQQPNMGDYRSGAPPPSYGGGGGYGGGGYG
GGGGYGGGGGRGGSRGGWDQGGGSYGRGGGGGYRGGNGGGGYSGSARVNA
QGFHGDERPNKQLEDQLFRKPHAQTTGINFDKYDDIPVETSGEGCPEPIT
SFTEEMVGAQMMTNLAFCNYTKPTPVQKYSVPIGLADRDLMACAQTGSGK
TAGFLFPTIVSMLRQGAPEPPQGGRNTGRKVYPMALVLAPTRELASQIFD
EAQKFCYCTGVRPVVIYGGAEVRNQLRELERGCDLLVATPGRLVDLMERD
RISLQSIRFLILDEADRMLDMGFEPQIRRIVEQEGMPTDARQTFMFSATF
PRDIQRLAADFMKDYIFLAVGRVGSASKDVIQKIEYVEMHDKIHFLVTFL
SQCDDSGLILIFVERKRDADYLEGVLYKQGFPSASIHGDKTQREREEALH
YFKTGQCPVLVATDVAARGLDISNVTQVINYDLPNNIDDYVHRIGRTGRV
GNVGHALSLMNEKNKNIARELFDLLSENGHDIPRFLEDMAYSGGGGGGRK
PRGGGRGGARFGARDFRKDRGGGGGDGYDRGGRGGGYQGGYGSGGGGYGG
QGGGYSGGGGGYGGGGGYSQSSGYGGGGGSYGGGGGYGGPPATGYGGPPS
RGGGGGYSGPPSYGRPPSDNSAW*

Synonyms

Publications