NO12G01320, NO12G01320 (gene) Nannochloropsis oceanica

Overview
NameNO12G01320
Unique NameNO12G01320
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1531
Alignment locationchr12:415525..417055 -

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Properties
Property NameValue
DescriptionWd40 repeat-containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:415525..417055 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR001680WD40_repeat
Homology
BLAST of NO12G01320 vs. NCBI_GenBank
Match: XP_009522954.1 (hypothetical protein PHYSODRAFT_312990 [Phytophthora sojae] >EGZ20237.1 hypothetical protein PHYSODRAFT_312990 [Phytophthora sojae])

HSP 1 Score: 117.5 bits (293), Expect = 8.900e-23
Identity = 95/364 (26.10%), Postives = 147/364 (40.38%), Query Frame = 0
Query:   25 APVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTAVINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQV----MPGGGMHPVMQLQQGHTALVRAV--DLWDGSWVTGGEDARLCLW---GCKVEAGEGVAATRGTEKMTKKKKGKEIA 361
            A V+   +DF   D +Y+L C      S +  ALS Y ++   R TL          H   I  +  SP  P    + S D+ V+LWD R         V+    E  S ++G G  LLA G      F+D R                                SEDG++C +D  +   D+AL  ILN E  + ++ FFG + + +  LTG+E   +W+  +A R      +R    + G+           + +   YD   + L L   + +G +  + +       G +     L+ GH A VR V  D    +  +GGEDARLC W   G   EAG+G ++   +    ++  G + A
Sbjct:   31 ALVADPAQDF---DYDYVLDCQPTAQRSGLALALSTYKLQLRSRETLALVHEF--HAHNSTIHEVWTSPSSPHQLATCSSDECVKLWDTRAA---LPAMVVPVGREVWSLSVGCGETLLAAGTDELALFYDVRTGAQLGQYGESHVDAITKVRFHPTQPAFVVTASEDGVVCFFDCRIPDEDDALESILNVESAITNIGFFGPQKENIFCLTGTETLDLWNLWTAQRLHHYATIRDDCNANGLPTD--------YLIDCLYDDQSNELFLLAGNHDGDMNAVNIGTDQASAGKLQHAAPLKGGHKACVRCVYYDPDSATLYSGGEDARLCRWTVPGASAEAGDGYSSVSSSTPSGRRATGLDPA 378          
BLAST of NO12G01320 vs. NCBI_GenBank
Match: XP_024571840.1 (WD40 repeat protein [Plasmopara halstedii] >CEG35471.1 WD40 repeat protein [Plasmopara halstedii])

HSP 1 Score: 115.9 bits (289), Expect = 2.600e-22
Identity = 86/323 (26.63%), Postives = 135/323 (41.80%), Query Frame = 0
Query:   34 FNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTAVINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWEG-------------------SEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQV----MPGGGMHPVMQLQQGHTALVRAV--DLWDGSWVTGGEDARLCLW 332
            +N  D +Y+L C      +++  ALSNY ++  +  TL+     +   H   I  +  SP  P    + S D+ V+LWD R  +    T  I    E  S ++G    LLA G  +   F+D R            G                   SEDG++C +D  +   D+A+  ILN E  V  + FFG + + +  LTG+E   +W+  +A R    D +R      GI           + +   Y+   + L L   +  G L ++ +       G +   M L+ GH A +R +  D  + +  TGGED RLC W
Sbjct:   28 YNEFDYDYVLDCKPMALKTSLALALSNYKVQLRNLETLELLHEFN--AHASTINEVWTSPSSPFHLATCSSDQYVKLWDTRVASP---TMEIPVGREVWSLSIGCSETLLATGTDDLALFYDVRTGKNVGQYGESLGNAITKVRFHPTQQAFVVTASEDGVVCFFDCRIPDEDDAIESILNVESAVTTIGFFGPQRENIFCLTGTETIDLWNIWTAERLHHYDTIRDDCNKSGIATD--------YLIDCVYEDQSNELFLLAGNHNGDLNIVTIGTDATSAGQIKHEMALESGHKACIRCIYYDSENSTLYTGGEDTRLCKW 337          
BLAST of NO12G01320 vs. NCBI_GenBank
Match: KUF90470.1 (WD repeat-containing protein 89 [Phytophthora nicotianae])

HSP 1 Score: 111.7 bits (278), Expect = 4.900e-21
Identity = 94/355 (26.48%), Postives = 145/355 (40.85%), Query Frame = 0
Query:   25 APVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTA-VINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQV----MPGGGMHPVMQLQQGHTALVRAV--DLWDGSWVTGGEDARLCLWGC--KVEAGEGVAATRGTEKMT 352
            A V+  +EDF   D +Y+L C    + S +  ALSN  I+     TL          H   I  +  SP  P    + S D+ V+LWD R     A  A V+    E  S ++G G  LLA G      F+D R                                SEDG++C +D  +   D+AL  I+N E  V  + FFG + + +  LTG+E   +W+  +A R    D +R         +  + G    + +   YD   + L L   + +G +  + +       G +     L+ GH A VR +  D  + +  TGGED RLC W      E  +G +++  + + T
Sbjct:   27 ALVANPSEDF---DYDYVLDCQPTANKSGLALALSNCKIQLRSLETL--GLMHEFHAHXSTINEVWTSPSSPFQLATCSSDECVKLWDTR----TALPAMVLPVGREVWSLSIGCGETLLATGTDELALFYDVRTGNKLGQYGESHVDAITKVRFHPTQPAFVVTASEDGVVCFFDCRIPDEDDALESIINVESAVTTVGFFGPQKENIFCLTGTETLDLWNLWTAERLHHYDTIRD--------DCNKNGLATDYLIDCVYDDQSNELFLLAGNHDGDMNAVTIGTDAASAGKLQHAAALKGGHKACVRCIYYDPENTTLYTGGEDTRLCKWSVPGAAETTDGYSSSSSSRRAT 364          
BLAST of NO12G01320 vs. NCBI_GenBank
Match: KUG01832.1 (WD repeat-containing protein 89 [Phytophthora nicotianae])

HSP 1 Score: 111.7 bits (278), Expect = 4.900e-21
Identity = 94/355 (26.48%), Postives = 145/355 (40.85%), Query Frame = 0
Query:   25 APVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTA-VINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQV----MPGGGMHPVMQLQQGHTALVRAV--DLWDGSWVTGGEDARLCLWGC--KVEAGEGVAATRGTEKMT 352
            A V+  +EDF   D +Y+L C    + S +  ALSN  I+     TL          H   I  +  SP  P    + S D+ V+LWD R     A  A V+    E  S ++G G  LLA G      F+D R                                SEDG++C +D  +   D+AL  I+N E  V  + FFG + + +  LTG+E   +W+  +A R    D +R         +  + G    + +   YD   + L L   + +G +  + +       G +     L+ GH A VR +  D  + +  TGGED RLC W      E  +G +++  + + T
Sbjct:   36 ALVANPSEDF---DYDYVLDCQPTANKSGLALALSNCKIQLRSLETL--GLMHEFHAHXSTINEVWTSPSSPFQLATCSSDECVKLWDTR----TALPAMVLPVGREVWSLSIGCGETLLATGTDELALFYDVRTGNKLGQYGESHVDAITKVRFHPTQPAFVVTASEDGVVCFFDCRIPDEDDALESIINVESAVTTVGFFGPQKENIFCLTGTETLDLWNLWTAERLHHYDTIRD--------DCNKNGLATDYLIDCVYDDQSNELFLLAGNHDGDMNAVTIGTDAASAGKLQHAAALKGGHKACVRCIYYDPENTTLYTGGEDTRLCKWSVPGAAETTDGYSSSSSSRRAT 373          
BLAST of NO12G01320 vs. NCBI_GenBank
Match: ETI49310.1 (hypothetical protein F443_06805 [Phytophthora parasitica P1569] >ETL95756.1 hypothetical protein L917_06485 [Phytophthora parasitica])

HSP 1 Score: 110.9 bits (276), Expect = 8.300e-21
Identity = 94/355 (26.48%), Postives = 145/355 (40.85%), Query Frame = 0
Query:   25 APVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTA-VINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQV----MPGGGMHPVMQLQQGHTALVRAV--DLWDGSWVTGGEDARLCLWGC--KVEAGEGVAATRGTEKMT 352
            A V+  +EDF   D +Y+L C    + S +  ALSN  I+     TL          H   I  +  SP  P    + S D+ V+LWD R     A  A V+    E  S ++G G  LLA G      F+D R                                SEDG++C +D  +   D+AL  I+N E  V  + FFG + + +  LTG+E   +W+  +A R    D +R         +  + G    + +   YD   + L L   + +G +  + +       G +     L+ GH A VR +  D  + +  TGGED RLC W      E  +G +++  + + T
Sbjct:   36 ALVANPSEDF---DYDYVLDCQPTANKSGLALALSNCKIQLRSLETL--GLMHEFHAHNSTINEVWTSPSSPFQLATCSSDECVKLWDTR----TALPAMVLPVGREVWSLSIGCGETLLATGTDELALFYDVRTGNKLGQYGESHVDAITKVRFHPTQPAFVVTASEDGVVCFFDCRIPDEDDALESIINVESAVTTVGFFGPQKENIFCLTGTETLDLWNLWTAERLHHYDTIRD--------DCNKNGLATDYLIDCVYDDQSNELFLLAGNHDGDMNAVTIGTDAASAGKLQHAAALKGGHKACVRCIYYDPENTTLYTGGEDTRLCKWSVPGAAETTDGYSSSSSSRRAT 373          
BLAST of NO12G01320 vs. NCBI_GenBank
Match: ETM48942.1 (hypothetical protein L914_06589 [Phytophthora parasitica] >ETO78037.1 hypothetical protein F444_06875 [Phytophthora parasitica P1976] >ETP19045.1 hypothetical protein F441_06809 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 110.9 bits (276), Expect = 8.300e-21
Identity = 94/355 (26.48%), Postives = 145/355 (40.85%), Query Frame = 0
Query:   25 APVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTA-VINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQV----MPGGGMHPVMQLQQGHTALVRAV--DLWDGSWVTGGEDARLCLWGC--KVEAGEGVAATRGTEKMT 352
            A V+  +EDF   D +Y+L C    + S +  ALSN  I+     TL          H   I  +  SP  P    + S D+ V+LWD R     A  A V+    E  S ++G G  LLA G      F+D R                                SEDG++C +D  +   D+AL  I+N E  V  + FFG + + +  LTG+E   +W+  +A R    D +R         +  + G    + +   YD   + L L   + +G +  + +       G +     L+ GH A VR +  D  + +  TGGED RLC W      E  +G +++  + + T
Sbjct:   36 ALVANPSEDF---DYDYVLDCQPTANKSGLALALSNCKIQLRSLETL--GLMHEFHAHNSTINEVWTSPSSPFQLATCSSDECVKLWDTR----TALPAMVLPVGREVWSLSIGCGETLLATGTDELALFYDVRTGNKLGQYGESHVDAITKVRFHPTQPAFVVTASEDGVVCFFDCRIPDEDDALESIINVESAVTTVGFFGPQKENIFCLTGTETLDLWNLWTAERLHHYDTIRD--------DCNKNGLATDYLIDCVYDDQSNELFLLAGNHDGDMNAVTIGTDAASAGKLQHAAALKGGHKACVRCIYYDPENTTLYTGGEDTRLCKWSVPGAAETTDGYSSSSSSRRAT 373          
BLAST of NO12G01320 vs. NCBI_GenBank
Match: XP_008892456.1 (hypothetical protein PPTG_02891 [Phytophthora parasitica INRA-310] >ETN23268.1 hypothetical protein PPTG_02891 [Phytophthora parasitica INRA-310])

HSP 1 Score: 110.9 bits (276), Expect = 8.300e-21
Identity = 94/355 (26.48%), Postives = 145/355 (40.85%), Query Frame = 0
Query:   25 APVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTA-VINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQV----MPGGGMHPVMQLQQGHTALVRAV--DLWDGSWVTGGEDARLCLWGC--KVEAGEGVAATRGTEKMT 352
            A V+  +EDF   D +Y+L C    + S +  ALSN  I+     TL          H   I  +  SP  P    + S D+ V+LWD R     A  A V+    E  S ++G G  LLA G      F+D R                                SEDG++C +D  +   D+AL  I+N E  V  + FFG + + +  LTG+E   +W+  +A R    D +R         +  + G    + +   YD   + L L   + +G +  + +       G +     L+ GH A VR +  D  + +  TGGED RLC W      E  +G +++  + + T
Sbjct:   36 ALVANPSEDF---DYDYVLDCQPTANKSGLALALSNCKIQLRSLETL--GLMHEFHAHNSTINEVWTSPSSPFQLATCSSDECVKLWDTR----TALPAMVLPVGREVWSLSIGCGETLLATGTDELALFYDVRTGNKLGQYGESHVDAITKVRFHPTQPAFVVTASEDGVVCFFDCRIPDEDDALESIINVESAVTTVGFFGPQKENIFCLTGTETLDLWNLWTAERLHHYDTIRD--------DCNKNGLATDYLIDCVYDDQSNELFLLAGNHDGDMNAVTIGTDAASAGKLQHAAALKGGHKACVRCIYYDPENTTLYTGGEDTRLCKWSVPGAAETTDGYSSSSSSRRAT 373          
BLAST of NO12G01320 vs. NCBI_GenBank
Match: KUF91912.1 (Replication factor C subunit 2 [Phytophthora nicotianae])

HSP 1 Score: 110.9 bits (276), Expect = 8.300e-21
Identity = 94/355 (26.48%), Postives = 145/355 (40.85%), Query Frame = 0
Query:   25 APVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTA-VINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQV----MPGGGMHPVMQLQQGHTALVRAV--DLWDGSWVTGGEDARLCLWGC--KVEAGEGVAATRGTEKMT 352
            A V+  +EDF   D +Y+L C    + S +  ALSN  I+     TL          H   I  +  SP  P    + S D+ V+LWD R     A  A V+    E  S ++G G  LLA G      F+D R                                SEDG++C +D  +   D+AL  I+N E  V  + FFG + + +  LTG+E   +W+  +A R    D +R         +  + G    + +   YD   + L L   + +G +  + +       G +     L+ GH A VR +  D  + +  TGGED RLC W      E  +G +++  + + T
Sbjct:   27 ALVANPSEDF---DYDYVLDCQPTANKSGLALALSNCKIQLRSLETL--GLMHEFHAHNSTINEVWTSPSSPFQLATCSSDECVKLWDTR----TALPAMVLPVGREVWSLSIGCGETLLATGTDELALFYDVRTGNKLGQYGESHVDAITKVRFHPTQPAFVVTASEDGVVCFFDCRIPDEDDALESIINVESAVTTVGFFGPQKENIFCLTGTETLDLWNLWTAERLHHYDTIRD--------DCNKNGLATDYLIDCVYDDQSNELFLLAGNHDGDMNAVTIGTDAASAGKLQHAAALKGGHKACVRCIYYDPENTTLYTGGEDTRLCKWSVPGAAETTDGYSSSSSSRRAT 364          
BLAST of NO12G01320 vs. NCBI_GenBank
Match: OEU20560.1 (WD40 repeat-like protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 110.5 bits (275), Expect = 1.100e-20
Identity = 92/369 (24.93%), Postives = 152/369 (41.19%), Query Frame = 0
Query:   13 LRPSKTQITTLQAPVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNA--CTAVINQEDEALSCTLGIGTELLAVGVGNA-IDFF---------------------------------DSRXXXXXXXXXXWEGSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSM----GIKEVGEQGGGGLFSVKY----HYDQGGDRLLLALSDVEGQLTVLQVMPGGGMHPVMQLQQGHTALVRAVDLWD-----GSWVTGGEDARLCLWG 333
            L PS+T +T+     S   +    DD +++L      +   V  ALSN  ++ YD+ TL+   +  +   +  +T +       +L  +++ D ++ L+DIR P   A   T  +  ++EAL  ++G   ++ AVG     I F+                                 DS             GSEDGL C++DT     + A+  IL  + P+RD+ FFG   + +  LTGSE   ++H   A       + R+ + +     G           +  ++Y    H+D     LL+     +G   V QV     + P+  L+ GH  ++RA   W       S+ T GEDAR+C WG
Sbjct:   19 LSPSRTVVTSFNPKKSTLNDGDYFDDGDWVLCVATNEERQKVGCALSNGEVQIYDQTTLQHLHTYQRNSSL--VTEMTFDTFDTNLLAATANDGSLTLYDIRQPINPAVEITNTLRPDEEALCISMGFDGKIAAVGSSKGKIHFYDIREKRGILGTYSQAHTNEVTRVRFQSFATQSSDSNCTSKTTTSTLVSGSEDGLACVFDTSKTTEESAITNILTVQSPIRDVGFFGPNSEAIYCLTGSESLQLYHKDDANCRKDFGNTREYLNNQLVRYGQNVATTSASSSVHPIEYLVDCHWDFARQELLMLAGSSKGDGAVFQV-DEQQISPLHCLRGGHRGVIRA---WSYNSNRSSFFTVGEDARMCEWG 381          
BLAST of NO12G01320 vs. NCBI_GenBank
Match: ETK89187.1 (hypothetical protein L915_06675 [Phytophthora parasitica])

HSP 1 Score: 109.8 bits (273), Expect = 1.900e-20
Identity = 94/355 (26.48%), Postives = 144/355 (40.56%), Query Frame = 0
Query:   25 APVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTA-VINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQV----MPGGGMHPVMQLQQGHTALVRAV--DLWDGSWVTGGEDARLCLWGC--KVEAGEGVAATRGTEKMT 352
            A V+  +EDF   D +Y+L C    + S +  ALSN  I+     TL          H   I  +  SP  P    + S D+ V+LWD R     A  A V+    E  S ++G G  LLA G      F+D R                                SEDG++C +D      D+AL  I+N E  V  + FFG + + +  LTG+E   +W+  +A R    D +R         +  + G    + +   YD   + L L   + +G +  + +       G +     L+ GH A VR +  D  + +  TGGED RLC W      E  +G +++  + + T
Sbjct:   36 ALVANPSEDF---DYDYVLDCQPTANKSGLALALSNCKIQLRSLETL--GLMHEFHAHNSTINEVWTSPSSPFQLATCSSDECVKLWDTR----TALPAMVLPVGREVWSLSIGCGETLLATGTDELALFYDVRTGNKLGQYGESHVDAITKVRFHPTQPAFVVTASEDGVVCFFDCRTPDEDDALESIINVESAVTTVGFFGPQKENIFCLTGTETLDLWNLWTAERLHHYDTIRD--------DCNKNGLATDYLIDCVYDDQSNELFLLAGNHDGDMNAVTIGTDAASAGKLQHAAALKGGHKACVRCIYYDPENTTLYTGGEDTRLCKWSVPGAAETTDGYSSSSSSRRAT 373          
The following BLAST results are available for this feature:
BLAST of NO12G01320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_009522954.18.900e-2326.10hypothetical protein PHYSODRAFT_312990 [Phytophtho... [more]
XP_024571840.12.600e-2226.63WD40 repeat protein [Plasmopara halstedii] >CEG354... [more]
KUF90470.14.900e-2126.48WD repeat-containing protein 89 [Phytophthora nico... [more]
KUG01832.14.900e-2126.48WD repeat-containing protein 89 [Phytophthora nico... [more]
ETI49310.18.300e-2126.48hypothetical protein F443_06805 [Phytophthora para... [more]
ETM48942.18.300e-2126.48hypothetical protein L914_06589 [Phytophthora para... [more]
XP_008892456.18.300e-2126.48hypothetical protein PPTG_02891 [Phytophthora para... [more]
KUF91912.18.300e-2126.48Replication factor C subunit 2 [Phytophthora nicot... [more]
OEU20560.11.100e-2024.93WD40 repeat-like protein [Fragilariopsis cylindrus... [more]
ETK89187.11.900e-2026.48hypothetical protein L915_06675 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010051NSK010051Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G01320.1NO12G01320.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|671391gene_5291Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G01320.1NO12G01320.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G01320 ID=NO12G01320|Name=NO12G01320|organism=Nannochloropsis oceanica|type=gene|length=1531bp
ATGGCCCCCATCAACGCTGCGTTCGCACCTCGGATGCTCCGCCCATCCAA
GACTCAAATTACAACCCTACAGGCCCCGGTGAGCATGGGGACAGAGGACT
TTAACGGGGACGATAACGAgtaagtgtgggcattgccttggaagggtggg
ttttgtggaagggattgggcgggaggttgactgcccgtggattcgtatca
taaatcgataaatgtttgaaagcagcgaaccttgaagccatttatatgat
catagtttatggcatgccacaagaccggtaggtacagtaaaacggaagga
ggtttcaagggcggcacggaaggagaggagggaagggcatcaccaacaac
tccttcccctccatgcgcgggaccctacggggctgccctatgtcaacgaa
acgacgtcgtgaaaacaaccacacaaattctcgttaatccacgtttgtac
ctgtttcttacccgatactatcattaagGTACATCCTCCACTGCGTCCAC
GCCTGCGACGGCAGCACCGTGACCGCCGCCCTCTCCAACTACCACATCAA
GACCTACGACCGCCCCACGCTAAAGCCCACATCATCGTCCTCCCAAAAAG
GTCACATAGGCCCTATAACTAGTCTCTGTCCCTCCCCCGACCATCCCTCT
TTATTTGTGTCCTCATCAGAAGATAAGACTGTGCGTTTGTGGGATATTAG
AGGCCCTAATAAAAATGCATGCACAGCTGTAATAAATCAGGAAGACGAAG
CCCTATCTTGTACCTTGGGTATCGGAACAGAATTGCTTGCCGTGGGAGTG
GGAAACGCTATCGATTTCTTTGATAGCCGCAAGGCTGGAGGAGGAGGGGG
GGGGGGAAGTTGGGAAGgtacgcggacgtacatactgacttggtgacgaa
agtggcctttcatccgtcaagaagggctacactggcgtcagGCTCTGAGG
ATGGTTTAATCTGTTTGTATGACACGGGGGTAGGGCAGGCGGACGAGGCG
TTGGTGTGTATTTTAAATGCGGAGTGCCCGGTGAGGGATTTGACATTTTT
TGGGGTAGAAGGGGATGGGCTGGCTTTGTTGACAGGGAGTGAAGGGACGA
TGGTCTGGCATTGGCCCTCTGCAGCACGGGCGTTGAAAATTGATGATTTG
AGACAGGCTGTGCCTTCCATGGGGATTAAGGAGGTGGGAGAGCAAGGAGG
AGGGGGCTTGTTTTCGGTAAAATACCATTATGACCAGGGCGGGGATAGGT
TGTTGCTGGCGTTGAGTGATGTGGAGGGACAGTTAACGGTGCTGCAGGTG
ATGCCGGGAGGGGGCATGCATCCGGTGATGCAGCTGCAGCAGGGCCATAC
GGCATTGGTGCGAGCGGTGGATTTGTGGGATGGGTCGTGGGTGACGGGAG
GGGAGGATGCCCGCCTTTGCTTATGGGGATGCAAGGTGGAGGCTGGGGAA
GGGGTTGCTGCGACCAGAGGAACAGAAAAAATGACCAAGAAAAAGAAGGG
CAAGGAGATAGCACACTACAAGCCATATTAA
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protein sequence of NO12G01320.1

>NO12G01320.1-protein ID=NO12G01320.1-protein|Name=NO12G01320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=366bp
MAPINAAFAPRMLRPSKTQITTLQAPVSMGTEDFNGDDNEYILHCVHACD
GSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFV
SSSEDKTVRLWDIRGPNKNACTAVINQEDEALSCTLGIGTELLAVGVGNA
IDFFDSRKAGGGGGGGSWEGSEDGLICLYDTGVGQADEALVCILNAECPV
RDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKE
VGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQVMPGGGMHPVMQ
LQQGHTALVRAVDLWDGSWVTGGEDARLCLWGCKVEAGEGVAATRGTEKM
TKKKKGKEIAHYKPY*
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Synonyms
Publications