NO12G01320, NO12G01320 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G01320 vs. NCBI_GenBank
Match: XP_009522954.1 (hypothetical protein PHYSODRAFT_312990 [Phytophthora sojae] >EGZ20237.1 hypothetical protein PHYSODRAFT_312990 [Phytophthora sojae]) HSP 1 Score: 117.5 bits (293), Expect = 8.900e-23 Identity = 95/364 (26.10%), Postives = 147/364 (40.38%), Query Frame = 0 Query: 25 APVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTAVINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQV----MPGGGMHPVMQLQQGHTALVRAV--DLWDGSWVTGGEDARLCLW---GCKVEAGEGVAATRGTEKMTKKKKGKEIA 361 A V+ +DF D +Y+L C S + ALS Y ++ R TL H I + SP P + S D+ V+LWD R V+ E S ++G G LLA G F+D R SEDG++C +D + D+AL ILN E + ++ FFG + + + LTG+E +W+ +A R +R + G+ + + YD + L L + +G + + + G + L+ GH A VR V D + +GGEDARLC W G EAG+G ++ + ++ G + A Sbjct: 31 ALVADPAQDF---DYDYVLDCQPTAQRSGLALALSTYKLQLRSRETLALVHEF--HAHNSTIHEVWTSPSSPHQLATCSSDECVKLWDTRAA---LPAMVVPVGREVWSLSVGCGETLLAAGTDELALFYDVRTGAQLGQYGESHVDAITKVRFHPTQPAFVVTASEDGVVCFFDCRIPDEDDALESILNVESAITNIGFFGPQKENIFCLTGTETLDLWNLWTAQRLHHYATIRDDCNANGLPTD--------YLIDCLYDDQSNELFLLAGNHDGDMNAVNIGTDQASAGKLQHAAPLKGGHKACVRCVYYDPDSATLYSGGEDARLCRWTVPGASAEAGDGYSSVSSSTPSGRRATGLDPA 378
BLAST of NO12G01320 vs. NCBI_GenBank
Match: XP_024571840.1 (WD40 repeat protein [Plasmopara halstedii] >CEG35471.1 WD40 repeat protein [Plasmopara halstedii]) HSP 1 Score: 115.9 bits (289), Expect = 2.600e-22 Identity = 86/323 (26.63%), Postives = 135/323 (41.80%), Query Frame = 0 Query: 34 FNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTAVINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWEG-------------------SEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQV----MPGGGMHPVMQLQQGHTALVRAV--DLWDGSWVTGGEDARLCLW 332 +N D +Y+L C +++ ALSNY ++ + TL+ + H I + SP P + S D+ V+LWD R + T I E S ++G LLA G + F+D R G SEDG++C +D + D+A+ ILN E V + FFG + + + LTG+E +W+ +A R D +R GI + + Y+ + L L + G L ++ + G + M L+ GH A +R + D + + TGGED RLC W Sbjct: 28 YNEFDYDYVLDCKPMALKTSLALALSNYKVQLRNLETLELLHEFN--AHASTINEVWTSPSSPFHLATCSSDQYVKLWDTRVASP---TMEIPVGREVWSLSIGCSETLLATGTDDLALFYDVRTGKNVGQYGESLGNAITKVRFHPTQQAFVVTASEDGVVCFFDCRIPDEDDAIESILNVESAVTTIGFFGPQRENIFCLTGTETIDLWNIWTAERLHHYDTIRDDCNKSGIATD--------YLIDCVYEDQSNELFLLAGNHNGDLNIVTIGTDATSAGQIKHEMALESGHKACIRCIYYDSENSTLYTGGEDTRLCKW 337
BLAST of NO12G01320 vs. NCBI_GenBank
Match: KUF90470.1 (WD repeat-containing protein 89 [Phytophthora nicotianae]) HSP 1 Score: 111.7 bits (278), Expect = 4.900e-21 Identity = 94/355 (26.48%), Postives = 145/355 (40.85%), Query Frame = 0 Query: 25 APVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTA-VINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQV----MPGGGMHPVMQLQQGHTALVRAV--DLWDGSWVTGGEDARLCLWGC--KVEAGEGVAATRGTEKMT 352 A V+ +EDF D +Y+L C + S + ALSN I+ TL H I + SP P + S D+ V+LWD R A A V+ E S ++G G LLA G F+D R SEDG++C +D + D+AL I+N E V + FFG + + + LTG+E +W+ +A R D +R + + G + + YD + L L + +G + + + G + L+ GH A VR + D + + TGGED RLC W E +G +++ + + T Sbjct: 27 ALVANPSEDF---DYDYVLDCQPTANKSGLALALSNCKIQLRSLETL--GLMHEFHAHXSTINEVWTSPSSPFQLATCSSDECVKLWDTR----TALPAMVLPVGREVWSLSIGCGETLLATGTDELALFYDVRTGNKLGQYGESHVDAITKVRFHPTQPAFVVTASEDGVVCFFDCRIPDEDDALESIINVESAVTTVGFFGPQKENIFCLTGTETLDLWNLWTAERLHHYDTIRD--------DCNKNGLATDYLIDCVYDDQSNELFLLAGNHDGDMNAVTIGTDAASAGKLQHAAALKGGHKACVRCIYYDPENTTLYTGGEDTRLCKWSVPGAAETTDGYSSSSSSRRAT 364
BLAST of NO12G01320 vs. NCBI_GenBank
Match: KUG01832.1 (WD repeat-containing protein 89 [Phytophthora nicotianae]) HSP 1 Score: 111.7 bits (278), Expect = 4.900e-21 Identity = 94/355 (26.48%), Postives = 145/355 (40.85%), Query Frame = 0 Query: 25 APVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTA-VINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQV----MPGGGMHPVMQLQQGHTALVRAV--DLWDGSWVTGGEDARLCLWGC--KVEAGEGVAATRGTEKMT 352 A V+ +EDF D +Y+L C + S + ALSN I+ TL H I + SP P + S D+ V+LWD R A A V+ E S ++G G LLA G F+D R SEDG++C +D + D+AL I+N E V + FFG + + + LTG+E +W+ +A R D +R + + G + + YD + L L + +G + + + G + L+ GH A VR + D + + TGGED RLC W E +G +++ + + T Sbjct: 36 ALVANPSEDF---DYDYVLDCQPTANKSGLALALSNCKIQLRSLETL--GLMHEFHAHXSTINEVWTSPSSPFQLATCSSDECVKLWDTR----TALPAMVLPVGREVWSLSIGCGETLLATGTDELALFYDVRTGNKLGQYGESHVDAITKVRFHPTQPAFVVTASEDGVVCFFDCRIPDEDDALESIINVESAVTTVGFFGPQKENIFCLTGTETLDLWNLWTAERLHHYDTIRD--------DCNKNGLATDYLIDCVYDDQSNELFLLAGNHDGDMNAVTIGTDAASAGKLQHAAALKGGHKACVRCIYYDPENTTLYTGGEDTRLCKWSVPGAAETTDGYSSSSSSRRAT 373
BLAST of NO12G01320 vs. NCBI_GenBank
Match: ETI49310.1 (hypothetical protein F443_06805 [Phytophthora parasitica P1569] >ETL95756.1 hypothetical protein L917_06485 [Phytophthora parasitica]) HSP 1 Score: 110.9 bits (276), Expect = 8.300e-21 Identity = 94/355 (26.48%), Postives = 145/355 (40.85%), Query Frame = 0 Query: 25 APVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTA-VINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQV----MPGGGMHPVMQLQQGHTALVRAV--DLWDGSWVTGGEDARLCLWGC--KVEAGEGVAATRGTEKMT 352 A V+ +EDF D +Y+L C + S + ALSN I+ TL H I + SP P + S D+ V+LWD R A A V+ E S ++G G LLA G F+D R SEDG++C +D + D+AL I+N E V + FFG + + + LTG+E +W+ +A R D +R + + G + + YD + L L + +G + + + G + L+ GH A VR + D + + TGGED RLC W E +G +++ + + T Sbjct: 36 ALVANPSEDF---DYDYVLDCQPTANKSGLALALSNCKIQLRSLETL--GLMHEFHAHNSTINEVWTSPSSPFQLATCSSDECVKLWDTR----TALPAMVLPVGREVWSLSIGCGETLLATGTDELALFYDVRTGNKLGQYGESHVDAITKVRFHPTQPAFVVTASEDGVVCFFDCRIPDEDDALESIINVESAVTTVGFFGPQKENIFCLTGTETLDLWNLWTAERLHHYDTIRD--------DCNKNGLATDYLIDCVYDDQSNELFLLAGNHDGDMNAVTIGTDAASAGKLQHAAALKGGHKACVRCIYYDPENTTLYTGGEDTRLCKWSVPGAAETTDGYSSSSSSRRAT 373
BLAST of NO12G01320 vs. NCBI_GenBank
Match: ETM48942.1 (hypothetical protein L914_06589 [Phytophthora parasitica] >ETO78037.1 hypothetical protein F444_06875 [Phytophthora parasitica P1976] >ETP19045.1 hypothetical protein F441_06809 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 110.9 bits (276), Expect = 8.300e-21 Identity = 94/355 (26.48%), Postives = 145/355 (40.85%), Query Frame = 0 Query: 25 APVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTA-VINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQV----MPGGGMHPVMQLQQGHTALVRAV--DLWDGSWVTGGEDARLCLWGC--KVEAGEGVAATRGTEKMT 352 A V+ +EDF D +Y+L C + S + ALSN I+ TL H I + SP P + S D+ V+LWD R A A V+ E S ++G G LLA G F+D R SEDG++C +D + D+AL I+N E V + FFG + + + LTG+E +W+ +A R D +R + + G + + YD + L L + +G + + + G + L+ GH A VR + D + + TGGED RLC W E +G +++ + + T Sbjct: 36 ALVANPSEDF---DYDYVLDCQPTANKSGLALALSNCKIQLRSLETL--GLMHEFHAHNSTINEVWTSPSSPFQLATCSSDECVKLWDTR----TALPAMVLPVGREVWSLSIGCGETLLATGTDELALFYDVRTGNKLGQYGESHVDAITKVRFHPTQPAFVVTASEDGVVCFFDCRIPDEDDALESIINVESAVTTVGFFGPQKENIFCLTGTETLDLWNLWTAERLHHYDTIRD--------DCNKNGLATDYLIDCVYDDQSNELFLLAGNHDGDMNAVTIGTDAASAGKLQHAAALKGGHKACVRCIYYDPENTTLYTGGEDTRLCKWSVPGAAETTDGYSSSSSSRRAT 373
BLAST of NO12G01320 vs. NCBI_GenBank
Match: XP_008892456.1 (hypothetical protein PPTG_02891 [Phytophthora parasitica INRA-310] >ETN23268.1 hypothetical protein PPTG_02891 [Phytophthora parasitica INRA-310]) HSP 1 Score: 110.9 bits (276), Expect = 8.300e-21 Identity = 94/355 (26.48%), Postives = 145/355 (40.85%), Query Frame = 0 Query: 25 APVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTA-VINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQV----MPGGGMHPVMQLQQGHTALVRAV--DLWDGSWVTGGEDARLCLWGC--KVEAGEGVAATRGTEKMT 352 A V+ +EDF D +Y+L C + S + ALSN I+ TL H I + SP P + S D+ V+LWD R A A V+ E S ++G G LLA G F+D R SEDG++C +D + D+AL I+N E V + FFG + + + LTG+E +W+ +A R D +R + + G + + YD + L L + +G + + + G + L+ GH A VR + D + + TGGED RLC W E +G +++ + + T Sbjct: 36 ALVANPSEDF---DYDYVLDCQPTANKSGLALALSNCKIQLRSLETL--GLMHEFHAHNSTINEVWTSPSSPFQLATCSSDECVKLWDTR----TALPAMVLPVGREVWSLSIGCGETLLATGTDELALFYDVRTGNKLGQYGESHVDAITKVRFHPTQPAFVVTASEDGVVCFFDCRIPDEDDALESIINVESAVTTVGFFGPQKENIFCLTGTETLDLWNLWTAERLHHYDTIRD--------DCNKNGLATDYLIDCVYDDQSNELFLLAGNHDGDMNAVTIGTDAASAGKLQHAAALKGGHKACVRCIYYDPENTTLYTGGEDTRLCKWSVPGAAETTDGYSSSSSSRRAT 373
BLAST of NO12G01320 vs. NCBI_GenBank
Match: KUF91912.1 (Replication factor C subunit 2 [Phytophthora nicotianae]) HSP 1 Score: 110.9 bits (276), Expect = 8.300e-21 Identity = 94/355 (26.48%), Postives = 145/355 (40.85%), Query Frame = 0 Query: 25 APVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTA-VINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQV----MPGGGMHPVMQLQQGHTALVRAV--DLWDGSWVTGGEDARLCLWGC--KVEAGEGVAATRGTEKMT 352 A V+ +EDF D +Y+L C + S + ALSN I+ TL H I + SP P + S D+ V+LWD R A A V+ E S ++G G LLA G F+D R SEDG++C +D + D+AL I+N E V + FFG + + + LTG+E +W+ +A R D +R + + G + + YD + L L + +G + + + G + L+ GH A VR + D + + TGGED RLC W E +G +++ + + T Sbjct: 27 ALVANPSEDF---DYDYVLDCQPTANKSGLALALSNCKIQLRSLETL--GLMHEFHAHNSTINEVWTSPSSPFQLATCSSDECVKLWDTR----TALPAMVLPVGREVWSLSIGCGETLLATGTDELALFYDVRTGNKLGQYGESHVDAITKVRFHPTQPAFVVTASEDGVVCFFDCRIPDEDDALESIINVESAVTTVGFFGPQKENIFCLTGTETLDLWNLWTAERLHHYDTIRD--------DCNKNGLATDYLIDCVYDDQSNELFLLAGNHDGDMNAVTIGTDAASAGKLQHAAALKGGHKACVRCIYYDPENTTLYTGGEDTRLCKWSVPGAAETTDGYSSSSSSRRAT 364
BLAST of NO12G01320 vs. NCBI_GenBank
Match: OEU20560.1 (WD40 repeat-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 110.5 bits (275), Expect = 1.100e-20 Identity = 92/369 (24.93%), Postives = 152/369 (41.19%), Query Frame = 0 Query: 13 LRPSKTQITTLQAPVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNA--CTAVINQEDEALSCTLGIGTELLAVGVGNA-IDFF---------------------------------DSRXXXXXXXXXXWEGSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSM----GIKEVGEQGGGGLFSVKY----HYDQGGDRLLLALSDVEGQLTVLQVMPGGGMHPVMQLQQGHTALVRAVDLWD-----GSWVTGGEDARLCLWG 333 L PS+T +T+ S + DD +++L + V ALSN ++ YD+ TL+ + + + +T + +L +++ D ++ L+DIR P A T + ++EAL ++G ++ AVG I F+ DS GSEDGL C++DT + A+ IL + P+RD+ FFG + + LTGSE ++H A + R+ + + G + ++Y H+D LL+ +G V QV + P+ L+ GH ++RA W S+ T GEDAR+C WG Sbjct: 19 LSPSRTVVTSFNPKKSTLNDGDYFDDGDWVLCVATNEERQKVGCALSNGEVQIYDQTTLQHLHTYQRNSSL--VTEMTFDTFDTNLLAATANDGSLTLYDIRQPINPAVEITNTLRPDEEALCISMGFDGKIAAVGSSKGKIHFYDIREKRGILGTYSQAHTNEVTRVRFQSFATQSSDSNCTSKTTTSTLVSGSEDGLACVFDTSKTTEESAITNILTVQSPIRDVGFFGPNSEAIYCLTGSESLQLYHKDDANCRKDFGNTREYLNNQLVRYGQNVATTSASSSVHPIEYLVDCHWDFARQELLMLAGSSKGDGAVFQV-DEQQISPLHCLRGGHRGVIRA---WSYNSNRSSFFTVGEDARMCEWG 381
BLAST of NO12G01320 vs. NCBI_GenBank
Match: ETK89187.1 (hypothetical protein L915_06675 [Phytophthora parasitica]) HSP 1 Score: 109.8 bits (273), Expect = 1.900e-20 Identity = 94/355 (26.48%), Postives = 144/355 (40.56%), Query Frame = 0 Query: 25 APVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTA-VINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQV----MPGGGMHPVMQLQQGHTALVRAV--DLWDGSWVTGGEDARLCLWGC--KVEAGEGVAATRGTEKMT 352 A V+ +EDF D +Y+L C + S + ALSN I+ TL H I + SP P + S D+ V+LWD R A A V+ E S ++G G LLA G F+D R SEDG++C +D D+AL I+N E V + FFG + + + LTG+E +W+ +A R D +R + + G + + YD + L L + +G + + + G + L+ GH A VR + D + + TGGED RLC W E +G +++ + + T Sbjct: 36 ALVANPSEDF---DYDYVLDCQPTANKSGLALALSNCKIQLRSLETL--GLMHEFHAHNSTINEVWTSPSSPFQLATCSSDECVKLWDTR----TALPAMVLPVGREVWSLSIGCGETLLATGTDELALFYDVRTGNKLGQYGESHVDAITKVRFHPTQPAFVVTASEDGVVCFFDCRTPDEDDALESIINVESAVTTVGFFGPQKENIFCLTGTETLDLWNLWTAERLHHYDTIRD--------DCNKNGLATDYLIDCVYDDQSNELFLLAGNHDGDMNAVTIGTDAASAGKLQHAAALKGGHKACVRCIYYDPENTTLYTGGEDTRLCKWSVPGAAETTDGYSSSSSSRRAT 373 The following BLAST results are available for this feature:
BLAST of NO12G01320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G01320 ID=NO12G01320|Name=NO12G01320|organism=Nannochloropsis oceanica|type=gene|length=1531bpback to top protein sequence of NO12G01320.1 >NO12G01320.1-protein ID=NO12G01320.1-protein|Name=NO12G01320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=366bpback to top Synonyms
Publications
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