NO12G01090, NO12G01090 (gene) Nannochloropsis oceanica

Overview
NameNO12G01090
Unique NameNO12G01090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1116
Alignment locationchr12:344839..345954 -

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Properties
Property NameValue
Descriptiontransferases;folic acid binding
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:344839..345954 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005542folic acid binding
GO:0016740transferase activity
GO:0005542folic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR022384FormiminoTrfase_cat_dom_sf
IPR013802Formiminotransferase_C
IPR012886Formiminotransferase_N
Homology
BLAST of NO12G01090 vs. NCBI_GenBank
Match: KRH26909.1 (hypothetical protein GLYMA_12G201700 [Glycine max])

HSP 1 Score: 180.6 bits (457), Expect = 7.100e-42
Identity = 101/293 (34.47%), Postives = 154/293 (52.56%), Query Frame = 0
Query:   20 CCKVYVSEGRNQVVLDRLAEVARTASPGLCALVQRFTDAVYHRSNFTLG---GPPGP--VLEVALRVIDEALENLDMTLHSDATHPRVGAVDHVSFHPLGSTPLEAARNVAIVLGQRVGEKWPVPVLMYGAC--SSRSLAEVRRSTSYFK----------GLALDSEIPHADFGPTRIDPKLGLLCCGAVPYVQNYNIRLNTSEKAVAARVTRAVRSKDGGPEGVEALTLRHDRGFMEVACNLLDLSKTGPEKVLEIVKEAARENGVEVEEAYTIGLTGQEILEETERLLREE 296
            CCKVY+SE RN+  L+ +   ++     L  ++ +F D  Y+R  +TL    G  GP  +    L ++  A +++D  +H+  THPR+G VDH+ FHPL    L+ A N A  L   +G    VP  +YGA     R+L  +RR   YFK          G+  DS   + D GP+++ P  G++  GA  +V NYN+ L +S+ +   R+ + V  + GG   V+A+ L H  G +EVACNLLD +K G E+V + V+  ARE G+ VE  Y    +  +I+        E+
Sbjct:    8 CCKVYISESRNRTALESIERASKLFP--LAPIINKFEDVAYNRVGYTLVSELGHSGPCHLSNAVLAMVKAAFDSIDFEVHT-GTHPRLGVVDHICFHPLLDASLDHAANAARCLATDMGSTLQVPTYLYGAAHEEGRTLDSIRRIFGYFKPNSIENQWIGGMKSDSLPLNPDSGPSQVTPAKGVVVIGATNWVDNYNVSLLSSDISAVRRIAKQVSGRGGGLPSVQAMALAHGEGVIEVACNLLDPNKVGGERVQQEVENLAREEGISVERGYYTDFSQDQIISSYLEFFEEK 297          
BLAST of NO12G01090 vs. NCBI_GenBank
Match: NP_001242633.1 (uncharacterized protein LOC100819129 [Glycine max] >ACU24134.1 unknown [Glycine max])

HSP 1 Score: 180.3 bits (456), Expect = 9.300e-42
Identity = 101/293 (34.47%), Postives = 153/293 (52.22%), Query Frame = 0
Query:   20 CCKVYVSEGRNQVVLDRLAEVARTASPGLCALVQRFTDAVYHRSNFTLG---GPPGP--VLEVALRVIDEALENLDMTLHSDATHPRVGAVDHVSFHPLGSTPLEAARNVAIVLGQRVGEKWPVPVLMYGAC--SSRSLAEVRRSTSYFK----------GLALDSEIPHADFGPTRIDPKLGLLCCGAVPYVQNYNIRLNTSEKAVAARVTRAVRSKDGGPEGVEALTLRHDRGFMEVACNLLDLSKTGPEKVLEIVKEAARENGVEVEEAYTIGLTGQEILEETERLLREE 296
            CCKVY+SE RN+  L+ +   ++     L  ++ +F D  Y+R  +TL    G  GP  +    L ++  A +++D  +H+  THPR+G VDH+ FHPL    L+ A N A  L   +G    VP  +YGA     R+L  +RR   YFK          G+  DS   + D GP+++ P  G++  GA  +V NYN+ L +S+     R+ + V  + GG   V+A+ L H  G +EVACNLLD +K G E+V + V+  ARE G+ VE  Y    +  +I+        E+
Sbjct:    8 CCKVYISESRNRTALESIERASKLFP--LAPIINKFEDVAYNRVGYTLVSELGHSGPCHLSNAVLAMVKAAFDSIDFEVHT-GTHPRLGVVDHICFHPLLDASLDHAANAARCLATDMGSTLQVPTYLYGAAHEEGRTLDSIRRIFGYFKPNSIENQWIGGMKSDSLPLNPDSGPSQVTPAKGVVVIGATNWVDNYNVSLLSSDICAVRRIAKQVSGRGGGLPSVQAMALAHGEGVIEVACNLLDPNKVGGERVQQEVENLAREEGISVERGYYTDFSQDQIISSYLEFFEEK 297          
BLAST of NO12G01090 vs. NCBI_GenBank
Match: XP_003543353.1 (PREDICTED: formimidoyltransferase-cyclodeaminase-like [Glycine max] >KRH22440.1 hypothetical protein GLYMA_13G300500 [Glycine max])

HSP 1 Score: 179.9 bits (455), Expect = 1.200e-41
Identity = 102/293 (34.81%), Postives = 153/293 (52.22%), Query Frame = 0
Query:   20 CCKVYVSEGRNQVVLDRLAEVARTASPGLCALVQRFTDAVYHRSNFTLG---GPPGP--VLEVALRVIDEALENLDMTLHSDATHPRVGAVDHVSFHPLGSTPLEAARNVAIVLGQRVGEKWPVPVLMYGAC--SSRSLAEVRRSTSYFK----------GLALDSEIPHADFGPTRIDPKLGLLCCGAVPYVQNYNIRLNTSEKAVAARVTRAVRSKDGGPEGVEALTLRHDRGFMEVACNLLDLSKTGPEKVLEIVKEAARENGVEVEEAYTIGLTGQEILEETERLLREE 296
            CCKVY+SE RN+  L+ +   ++     L  ++ +F D  Y+R  +TL    G  GP  +    L ++  A + +D  +HS  THPR+G VDH+ FHPL    L+ A N A  L   +G    VP  +YGA     R+L  +RR   YFK          GL  D+   + D GP+++ P  G++  GA  +V NYN+ L +S+ +   R+ + V  + GG   V+A+ L H  G +EVACNLLD +K G E+V + V+  ARE G+ VE  Y    +  +I+        E+
Sbjct:    8 CCKVYISESRNRTALESIERASKLFP--LAPIINKFEDVTYNRVGYTLVSELGHSGPCHLANSVLAMVKAAFDTIDFEVHS-GTHPRLGVVDHICFHPLLDASLDQAANAARCLATDMGSTLQVPTYLYGAAHEEGRTLDSIRRIFGYFKPNSSENQWIGGLKSDTLPLNPDSGPSQVTPAKGVVVIGATNWVDNYNVPLLSSDISAVQRIAKRVSGRGGGLPSVQAMALAHGEGVIEVACNLLDPNKVGGERVQQEVENLAREEGISVEMGYYTDFSQDQIISSYLEFFEEK 297          
BLAST of NO12G01090 vs. NCBI_GenBank
Match: XP_018820130.1 (PREDICTED: formimidoyltransferase-cyclodeaminase-like [Juglans regia])

HSP 1 Score: 179.9 bits (455), Expect = 1.200e-41
Identity = 102/298 (34.23%), Postives = 153/298 (51.34%), Query Frame = 0
Query:   14 SARLLVCCKVYVSEGRNQVVLDRLAEVARTASPGLCALVQRFTDAVYHRSNFTLGG--------PPGPVLEVALRVIDEALENLDMTLHSDATHPRVGAVDHVSFHPLGSTPLEAARNVAIVLGQRVGEKWPVPVLMYGAC--SSRSLAEVRRSTSYFK----------GLALDSEIPHADFGPTRIDPKLGLLCCGAVPYVQNYNIRLNTSEKAVAARVTRAVRSKDGGPEGVEALTLRHDRGFMEVACNLLDLSKTGPEKVLEIVKEAARENGVEVEEAYTIGLTGQEILEETERL 292
            S  +L CCKVY+SE RN+  L+ +   A+       A++ +F D  Y+R  +TL           P P+    L ++  A E +D+ LH   +HPR+G VDH+ FHPL    L+    VA  L   +G +  VP  +YGA     R+L  +RR   YFK          G   +S +   D GP  +  + G++  GA P+V NYN+ + +++     R+ + V  + GG   V+A+ L H     EVACNLL+ SK G +KV + V+  ARE G+ V + Y   L+ +EI+E   RL
Sbjct:   21 SKLMLACCKVYISESRNRAALETIERAAKLFPE--AAIINKFEDETYNRVGYTLASKLHPKPSYEPCPLRTAVLAMVKAAFETIDLELHC-GSHPRLGVVDHICFHPLAYASLDQTAGVAKSLAADIGSRMQVPTFLYGAAHEEGRTLDSIRRELGYFKPNSSGTQWAGGPRSESLLLKPDGGPAHMSVEQGVVVIGATPWVDNYNVPVFSADITALRRIAKRVSERGGGLPSVQAMALAHGEDVTEVACNLLEPSKVGGDKVQQEVERLAREEGMVVGKGYFTDLSQEEIVEAFLRL 315          
BLAST of NO12G01090 vs. NCBI_GenBank
Match: GAY59177.1 (hypothetical protein CUMW_192590 [Citrus unshiu])

HSP 1 Score: 179.9 bits (455), Expect = 1.200e-41
Identity = 104/298 (34.90%), Postives = 156/298 (52.35%), Query Frame = 0
Query:   14 SARLLVCCKVYVSEGRNQVVLDRLAEVARTASPGLCALVQRFTDAVYHRSNFT----LGGPPG----PVLEVALRVIDEALENLDMTLHSDATHPRVGAVDHVSFHPLGSTPLEAARNVAIVLGQRVGEKWPVPVLMYGAC--SSRSLAEVRRSTSYFK----------GLALDSEIPHADFGPTRIDPKLGLLCCGAVPYVQNYNIRLNTSEKAVAARVTRAVRSKDGGPEGVEALTLRHDRGFMEVACNLLDLSKTGPEKVLEIVKEAARENGVEVEEAYTIGLTGQEILEETERL 292
            S  +L CCKVY+SE RN+  L+ + + A+  S    A+V +F D  Y+R  +T    L   P     P+      ++  A EN+D+ +HS  +HPR+G VDH+ FHPL S PL+    +A  L   +G    VP  +YGA     R+L  +RR+  YFK          GL  +S +   D GP ++    G++  G+  +V NYN+ + ++  A   R  + V  + GG   V+A+ L H     EVACNLL+ SK G +KV   VK+ A E G+ V + Y   L+ +EI+E   +L
Sbjct:    2 SKLMLACCKVYISESRNKAALESIEQAAKLFSE--AAIVNKFEDVTYNRVGYTVVSKLAPKPSSNSHPLKSTVFAMVKAAFENIDLDMHS-GSHPRLGVVDHICFHPLASAPLDQVAEIAKSLAGDIGSDLQVPTFLYGAAHEEGRTLDSIRRNLGYFKPNSAGNQWAGGLNSESLLVKPDRGPDQVTQSKGVIVIGSTRWVDNYNVPVFSTSIAAVRRKAKRVSERGGGLASVQAMALTHGEVITEVACNLLEPSKIGGDKVQLEVKKLAGEEGMAVGKGYYTDLSQKEIIERYMKL 296          
BLAST of NO12G01090 vs. NCBI_GenBank
Match: XP_008679597.1 (formimidoyltransferase-cyclodeaminase [Zea mays])

HSP 1 Score: 179.5 bits (454), Expect = 1.600e-41
Identity = 111/287 (38.68%), Postives = 152/287 (52.96%), Query Frame = 0
Query:   18 LVCCKVYVSEGRNQVVLDRLAEVARTASPGLCALVQRFTDAVYHRSNFTL------GGPPGPVLEVALRVIDEALENLDMTLHSDATHPRVGAVDHVSFHPLGSTPLEAARNVAIVLGQRVGEKWPVPVLMYGAC--SSRSLAEVRRSTSYFKGL---------ALDSEIPHA-DFGPTRIDPKLGLLCCGAVPYVQNYNIRLNTSEKAVAARVTRAVRSKDGGPEGVEALTLRHDRGFMEVACNLLDLSKTGPEKVLEIVKEAARENGVEVEEAYTIGLTGQEILE 287
            L CCK+Y+SE RN   L R  E A  A   L  LV  F D  Y+R  +TL      GG   P+   + RV+  A+E +D+  H+ A HPR+G VDHV+FHPL S  LE    +A  +   +G++  VP  +YGA     R+LA +RR   YF            A DS +P A D GP       G++  GA P+V NYN+ L T++ +VA R+ RAV  + GG   V+A+ L H  G  EVACNLL     G ++V E V   A   GV V + Y   L+ ++++E
Sbjct:    7 LACCKLYISEARNSGAL-RAIEHAAAALRPLAVLVNTFADDAYNRVGYTLVSPLAGGGASPPLRCASFRVVAAAIEAVDLDAHAGA-HPRLGVVDHVAFHPLASAHLEDVTALARAVAADIGDRLQVPTYLYGAAHRDGRTLASIRRQLGYFTPTSPGGEQWHGAPDSLLPVAPDAGPRTSSASNGVVVVGATPWVDNYNVPLTTADVSVARRIARAVSERGGGLACVQAMGLAHGDGATEVACNLLHPDAVGADQVQERVSRLAAGLGVGVGQGYFTDLSREKVVE 291          
BLAST of NO12G01090 vs. NCBI_GenBank
Match: XP_018856989.1 (PREDICTED: formimidoyltransferase-cyclodeaminase-like isoform X1 [Juglans regia])

HSP 1 Score: 179.5 bits (454), Expect = 1.600e-41
Identity = 101/293 (34.47%), Postives = 152/293 (51.88%), Query Frame = 0
Query:   14 SARLLVCCKVYVSEGRNQVVLDRLAEVARTASPGLCALVQRFTDAVYHRSNFTLGG--------PPGPVLEVALRVIDEALENLDMTLHSDATHPRVGAVDHVSFHPLGSTPLEAARNVAIVLGQRVGEKWPVPVLMYGAC--SSRSLAEVRRSTSYFK----------GLALDSEIPHADFGPTRIDPKLGLLCCGAVPYVQNYNIRLNTSEKAVAARVTRAVRSKDGGPEGVEALTLRHDRGFMEVACNLLDLSKTGPEKVLEIVKEAARENGVEVEEAYTIGLTGQEILE 287
            S  +L CCKVY+SE RN+V L+ +   A+       A++ +F D  Y+R  +TL           P P+    L ++  A E +D+ LH   +HPR+G VDH+ FHPL    L+    VA  L   +G +  VP  +YGA     R+L  +RR   YFK          G   +S +   D GP  +  + G++  GA P+V NYN+ + +++     R+ + V  + GG   V+A+ L H     EVACNLL+ SK G +KV + V+  ARE G+ V + Y   L+ +EI+E
Sbjct:    2 SKLMLACCKVYISESRNRVALETIERAAKLFPE--AAIINKFEDETYNRVGYTLASKLHPKPSYEPCPLRTAVLAMVKAAFETIDLELHC-GSHPRLGVVDHICFHPLAYASLDQTAGVAKSLAADIGCRMQVPTFLYGAAHEEGRTLDSIRRELGYFKPNSSGTQWAGGPRSESLLLKPDGGPAHMSGEQGVVVIGATPWVDNYNVPVFSADITALRRIAKRVSERGGGLPSVQAMALAHGEDVTEVACNLLEPSKVGGDKVQQEVERLAREEGMVVGKGYFTDLSQEEIVE 291          
BLAST of NO12G01090 vs. NCBI_GenBank
Match: XP_018856990.1 (PREDICTED: formimidoyltransferase-cyclodeaminase-like isoform X2 [Juglans regia])

HSP 1 Score: 179.5 bits (454), Expect = 1.600e-41
Identity = 101/293 (34.47%), Postives = 152/293 (51.88%), Query Frame = 0
Query:   14 SARLLVCCKVYVSEGRNQVVLDRLAEVARTASPGLCALVQRFTDAVYHRSNFTLGG--------PPGPVLEVALRVIDEALENLDMTLHSDATHPRVGAVDHVSFHPLGSTPLEAARNVAIVLGQRVGEKWPVPVLMYGAC--SSRSLAEVRRSTSYFK----------GLALDSEIPHADFGPTRIDPKLGLLCCGAVPYVQNYNIRLNTSEKAVAARVTRAVRSKDGGPEGVEALTLRHDRGFMEVACNLLDLSKTGPEKVLEIVKEAARENGVEVEEAYTIGLTGQEILE 287
            S  +L CCKVY+SE RN+V L+ +   A+       A++ +F D  Y+R  +TL           P P+    L ++  A E +D+ LH   +HPR+G VDH+ FHPL    L+    VA  L   +G +  VP  +YGA     R+L  +RR   YFK          G   +S +   D GP  +  + G++  GA P+V NYN+ + +++     R+ + V  + GG   V+A+ L H     EVACNLL+ SK G +KV + V+  ARE G+ V + Y   L+ +EI+E
Sbjct:    2 SKLMLACCKVYISESRNRVALETIERAAKLFPE--AAIINKFEDETYNRVGYTLASKLHPKPSYEPCPLRTAVLAMVKAAFETIDLELHC-GSHPRLGVVDHICFHPLAYASLDQTAGVAKSLAADIGCRMQVPTFLYGAAHEEGRTLDSIRRELGYFKPNSSGTQWAGGPRSESLLLKPDGGPAHMSGEQGVVVIGATPWVDNYNVPVFSADITALRRIAKRVSERGGGLPSVQAMALAHGEDVTEVACNLLEPSKVGGDKVQQEVERLAREEGMVVGKGYFTDLSQEEIVE 291          
BLAST of NO12G01090 vs. NCBI_GenBank
Match: KNA23916.1 (hypothetical protein SOVF_019600 [Spinacia oleracea])

HSP 1 Score: 179.1 bits (453), Expect = 2.100e-41
Identity = 104/303 (34.32%), Postives = 159/303 (52.48%), Query Frame = 0
Query:   17 LLVCCKVYVSEGRNQVVLDRLAEVARTASPGLCALVQRFTDAVYHRSNFTLGGPPGPVL--------EVALRVIDEALENLDMTLHSDATHPRVGAVDHVSFHPLGSTPLEAARNVAIVLGQRVGEKWPVPVLMYGAC--SSRSLAEVRRSTSYFK--------GLALDSE-IP-HADFGPTRIDPKLGLLCCGAVPYVQNYNIRLNTSEKAVAARVTRAVRSKDGGPEGVEALTLRHDRGFMEVACNLLDLSKTGPEKVLEIVKEAARENGVEVEEAYTIGLTGQEILEETERLLREEGDKS 300
            +L CCK+Y+SE RN   LD +   A+        ++ +F D  Y+R  +TL     P L        + A  ++  AL+ +D  +HS  +HPR+G VDH+ FHPL S  LE   N+A  L   +G K  VP  +YGA     R+L  VRR   YFK            DSE +P H D GP+++DP  G++  G+  +V NYN+ + +++ +   ++++ V  + GG   V+A+ L H  G +EVACNLL+ SK G ++V   V+  ARE G+   + Y    + ++I+        E GD S
Sbjct:    5 MLACCKLYISESRNTAALDSIERAAKIFHD--TKIINKFKDETYNRVGYTLVSKLSPKLSSDVFPLKDAAFAMVSSALKAVDYNMHS-GSHPRLGVVDHICFHPLASISLEQTANIARFLATDIGTKLEVPSFLYGAAHEKGRTLDSVRRELGYFKPNTQGNIWAGGPDSETLPLHPDEGPSQVDPSKGVVVIGSTRWVDNYNVPIFSTDLSAVRKISKLVSERGGGLPSVQAMALTHGEGVIEVACNLLEPSKVGGDQVQAEVERLAREAGMVAGKGYFTDFSQEQII----NAFLESGDTS 300          
BLAST of NO12G01090 vs. NCBI_GenBank
Match: OMO96397.1 (hypothetical protein CCACVL1_04978 [Corchorus capsularis])

HSP 1 Score: 179.1 bits (453), Expect = 2.100e-41
Identity = 103/297 (34.68%), Postives = 156/297 (52.53%), Query Frame = 0
Query:   16 RLLVCCKVYVSEGRNQVVLDRLAEVARTASPGLCALVQRFTDAVYHRSNFTL--------GGPPGPVLEVALRVIDEALENLDMTLHSDATHPRVGAVDHVSFHPLGSTPLEAARNVAIVLGQRVGEKWPVPVLMYGACS--SRSLAEVRRSTSYFK----------GLALDSEIPHADFGPTRIDPKLGLLCCGAVPYVQNYNIRLNTSEKAVAARVTRAVRSKDGGPEGVEALTLRHDRGFMEVACNLLDLSKTGPEKVLEIVKEAARENGVEVEEAYTIGLTGQEILEETERLL 293
            ++L C KVY+SE RN+  L+ +   A+       ALV +F D  Y+R  +T+             P+      ++  ALE ++  LHS  THPR+G VDH+ FHPL  T L+ A  +A  L   +G +  VP  +YGA S   R LA +RR   YFK          G   +S     D GP ++ P  G++  GA  +V NYN+ + +++ A   R+ + V  + GG   V+A+ L HD G  EVACNLL+ SK G ++V   V+  A+E G+ V + Y   L+  +I+E  ++L+
Sbjct:  143 KMLACGKVYISESRNRAALESIERAAKLFPE--TALVNKFVDVTYNRVGYTVVSKLTSKASQDLCPLKGAVFAIVKAALETINFELHS-GTHPRLGVVDHICFHPLAHTSLDQAALIAKSLAADIGSELQVPAYLYGAASEGGRLLASIRRELGYFKPNFGDIQWFGGTKSESLPLKPDAGPIKVSPTKGVILIGATNWVDNYNVPMFSTDIAAVRRIAKKVSERGGGLPSVQAMGLAHDDGVTEVACNLLEPSKVGGDRVQLEVERLAKEEGLSVGKGYFTDLSRDKIIERYQKLI 436          
The following BLAST results are available for this feature:
BLAST of NO12G01090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
KRH26909.17.100e-4234.47hypothetical protein GLYMA_12G201700 [Glycine max][more]
NP_001242633.19.300e-4234.47uncharacterized protein LOC100819129 [Glycine max]... [more]
XP_003543353.11.200e-4134.81PREDICTED: formimidoyltransferase-cyclodeaminase-l... [more]
XP_018820130.11.200e-4134.23PREDICTED: formimidoyltransferase-cyclodeaminase-l... [more]
GAY59177.11.200e-4134.90hypothetical protein CUMW_192590 [Citrus unshiu][more]
XP_008679597.11.600e-4138.68formimidoyltransferase-cyclodeaminase [Zea mays][more]
XP_018856989.11.600e-4134.47PREDICTED: formimidoyltransferase-cyclodeaminase-l... [more]
XP_018856990.11.600e-4134.47PREDICTED: formimidoyltransferase-cyclodeaminase-l... [more]
KNA23916.12.100e-4134.32hypothetical protein SOVF_019600 [Spinacia olerace... [more]
OMO96397.12.100e-4134.68hypothetical protein CCACVL1_04978 [Corchorus caps... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010023NSK010023Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G01090.1NO12G01090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591936gene_5264Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G01090.1NO12G01090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G01090 ID=NO12G01090|Name=NO12G01090|organism=Nannochloropsis oceanica|type=gene|length=1116bp
AACAGACCTCCAAGCACAGGATAGCGGCAAGGCAGCAGCTTGAACCTCCT
CCTGTCTTGGCACCAGCAAGACAGCCCGACTCTCATAATCGTCATTCCCC
GAGCAAGCTGTCCAACCCATGCCCTTGACACCCCCCGTCATCGCTTCCCC
GCCGTCCTCTGCCCGTCTGCTCGTGTGTTGCAAGGTCTATGTCTCCGAAG
GCAGGAATCAAGTCGTGTTGGATCGCCTGGCCGAAGTGGCACGCACGGCC
TCTCCCGGGTTGTGTGCATTGGTCCAGCGCTTCACGGACGCCGTCTACCA
CCGCAGCAATTTTACATTGGGTGGGCCCCCGGGACCTGTGCTGGAGGTGG
CTTTGAGGGTGATTGACGAGGCTTTGGAGAATTTAGACATGACCCTGCAC
AGCGATGCCACCCATCCGCGGGTGGGCGCTGTGGATCATGTTTCCTTCCA
CCCCCTGGGGAGCACTCCGTTGGAGGCTGCCCGGAACGTCGCAATAGTAC
TAGGACAAAGGGTTGGGGAGAAGTGGCCTGTGCCGGTTTTGATGTATGGG
GCATGTAGTTCTAGATCGTTGGCGGAAGTGCGGAGGAGCACGTCCTATTT
CAAGGGGCTGGCACTTGACAGCGAGATACCCCATGCTGATTTCGGGCCTA
CCCGCATAGATCCCAAGTTGGGGTTGCTTTGTTGTGGTGCGGTGCCTTAT
GTCCAGAATTATAACATTCGGTTGAATACATCGGAGAAAGCGGTTGCGGC
CAGGGTGACGCGTGCGGTGCGAAGCAAGGATGGAGGACCGGAGGGGGTGG
AGGCCTTGACCTTGAGACATGACAGAGGGTTTATGGAAGTGGCGTGTAAT
TTACTCGATCTGAGTAAGACGGGTCCAGAGAAGGTTTTGGAGATTGTAAA
GGAGGCGGCGAGGGAGAATGGGGTTGAGGTGGAGGAGGCATATACGATTG
GTTTGACGGGGCAAGAGATATTGGAGGAGACGGAGCGATTATTGAGGGAA
GAAGGGGATAAGAGTAGGGTAAGAATGTGAGAAATATTGAAGAAGGAACC
AAAATGTAATGTAAAAAAAATGATGGATGACGATGATAGAAGAAATCTTT
TCGTCGTCATTGAATG
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protein sequence of NO12G01090.1

>NO12G01090.1-protein ID=NO12G01090.1-protein|Name=NO12G01090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=304bp
MPLTPPVIASPPSSARLLVCCKVYVSEGRNQVVLDRLAEVARTASPGLCA
LVQRFTDAVYHRSNFTLGGPPGPVLEVALRVIDEALENLDMTLHSDATHP
RVGAVDHVSFHPLGSTPLEAARNVAIVLGQRVGEKWPVPVLMYGACSSRS
LAEVRRSTSYFKGLALDSEIPHADFGPTRIDPKLGLLCCGAVPYVQNYNI
RLNTSEKAVAARVTRAVRSKDGGPEGVEALTLRHDRGFMEVACNLLDLSK
TGPEKVLEIVKEAARENGVEVEEAYTIGLTGQEILEETERLLREEGDKSR
VRM*
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