NO12G01030, NO12G01030 (gene) Nannochloropsis oceanica

Overview
NameNO12G01030
Unique NameNO12G01030
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3919
Alignment locationchr12:325152..329070 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:325152..329070 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO12G01030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010019NSK010019Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G01030.1NO12G01030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G01030.1NO12G01030.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G01030 ID=NO12G01030|Name=NO12G01030|organism=Nannochloropsis oceanica|type=gene|length=3919bp
GGCACTTTGAAGAGGGGAGGATGGAGGGAGCAAAGTGTGCCTAGGCCAGC
CGCACAAACGGGCAGCACTACCTCCGTGACTGCTACATTCTCCATCCGGC
TGCATAGACGCTTGTGTGTGGGTTGTGCTGTCTTCGAATGCTGTCGTGTA
GGTGTGGTGGGAAAGGCGCTCTCCAAATTCCTTCAGCGAGAGGCGGTTTG
CGCGCCAAGACAGAAGACGTCCTCACACATTCCTAACTTGCCCAACTCCA
CTCACATGCCAAAGCACTGACACCCAATCCATTGAGCACAGGCAGAGGCT
CTCTCAATCTCCACGCACAGCGATGCCGGCCTTCGGTTCCTGCTCCCCAA
AGCAAAAGCCACCAAGCGCCCTCCGCAGACCCACTCCGAAAAAGGTCGCC
TCCCCTCCTCCTCCTCCTCCTCCTGCCTCTGCTGCGGCACATCGCCGCCC
GCCCGCAGCAGCAGCAATCCTTTCCGCTCCCGCAGTCAGCAGAAATCAGA
GACATACTGTCCATGTCAAGTCTGCATATTTCCCCCAAGATGACGAGGAG
GAGGAGAGCTCTTCGTGTTGGGACTGGGAGGAAGGAGGGAGCGGCAGTCC
ATGGATAGCAGGAGGGGCAAGGGGGAGGCAACAAGACAGCATTTTGGGGA
AAGTCAAGTTCCCTCTCGTGCAAAAAGGGGCAAATATTCACATCGAAGAA
GAGAACGACAAGGAAGAAAACGAAGTCTCCTTCTCCTTCCCTGCCACGCA
CGAAGCGCTCTGGCCCCGCCACCCGCACGGCCAGTGTGAGATTGTGACAC
TCTCAGCCCGCGATGTCTTGGCCCCTTTGATCTTCTTGCCACTACAGTCC
TTGCGTATACTGCATGCCCGTCTGCTTTCCCTCCATTCCTCCGCCTCATC
AGAAGCAGCCGGTGTCACCCACACATCTGCTTATTACTCTCCTCGGTCAC
GGTCGTCGGCAGCATCGCCTTTTCCAAGAATTCTTACGGTAGATACCGCT
CTTTTTCCAACAGCTGCCTGTCTCCGGCATCTCCCCCCCCATTCCTTAAT
TCGAAGCCTTGCCCAACCCCCGCCCTTCAGCCTGTTCCTCCTTCAGCAGC
AGCAGCAGCTGCAGCAGCAGCAGCAGCAGCAACATCCCGCTGCTGAAGAA
GGGAAAGCCAGCGGCTTCACGCAGACGGTGGTTTCCTTGCCCCTCATTCA
CGTCAACAATGAGGAAGAGGAGCAGCAGCAGCTGCTGCAGCAGCAGCAGC
AGAGTTACCAAGCCCTCCTAGCTACGGCCCAGGGATCGTTTCTCAACGAG
GATGAGGACGAGGAGGGGAGGGAAGGCGAGAAACATCACTCCGCCGCACT
CTTTCCCTCCATACGCCTTTTCGCTCAAATAGCCACACCCGGCACACTCA
CTCTCCGTGCGGAGCAAGTTCTTCCCTCCCTCTCCCTCCGCTTCACGCCC
CTCCCTCCCCTCGTCAGTCTAAACAACATCCTTTGGCGTACACTCACCAC
ACCACCACCACCATCATCACCACCATCATCGTCACCATCATTATCAGCAG
CAATGGCGAATAGCGGCAGCAGCAGCAGCAGTCAAAGTAGTAGTACTAGT
TGCAGTACAGGATATCTCACCCTGACAGGAACGAGGAGGGTCGTCTTCCT
TCCCTCTTCTACTTCCTCCCTCCTTCCCTCCCAGCAGCCTCCCCCCTTGG
TCGGCGTGTGGGTGGCGGGCATTGAGGAAATAAGGGAAGGAGGGAAGAAA
GAAGGAGGACTGATTGGTCACCCTTGCGTATTCAGAGCAATCATGCAATA
CCTTCTAAGGGACGGAGGAACGACAGGAGGGCGAGAGGGACGACATGTGT
CCATGGAGGAGGGCACGTGCCTGGTTGCTTGCTTTGCTGTAGCTGGGGGG
GCGCCGCACTTTTGGGAGGTAAAATTGAAGATGTCTTCCCCTCCTACCTC
TCTCGCGCATTCCTATCCTTCTGTGTCTTACAATCTATTGGATTTTGCGG
TTGACATTTCCTTGGACATGGACATTGAGGAGGAGAGCGGGGAGGAAGAA
GGGCGGGAAGGAGGGATGGAGGGATGGAGGGGAGGAAGTGACTGGGATAA
TGTGGTAGTGGGCCACTTCCGAGAGACGGCTTGCCCGATCCGAGCCGCGG
CTTTTTTATCGGCGCAGCAGGAGCAGCAGCAGCAGCAGCAGCAGCATCAT
CATCATCATCATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACA
ACAAAGACAGCAGCAGCAGCAGCAGCAGAAGACATACAAATGCCAACTTA
CGGGGAAAGGAGAGAATGGAGGGAGGGAGGGAGGAAATGTATGTGCTCAA
GCAGCGATCGTACCAACAGACCCCTCCTCCTCCTGCATCCACTCCTACGC
TTCCTGTTCTTCTTCCCCTCCTCCCTCCTCATCTTTCTCCTTCCGTTCCT
TCCCCTCCCTGCTTCCGCGAGAAGTGGTGGTCGAGGTGGAGAGAGAGAAC
GTCTCGTGCTTGACCTTGGAGAGCTGCCTCCCTGCCTCTCACTCTACAAC
CTTCACATACCTTCCTCCTCCTTCCTCGGCTGCTGTTGCTACTGCTGGTC
TTCGTCCTCCCTCCGCTGCATCCTCCCCCGCAGCTGCCATTTTCCCTTCT
TTTTCTTGGTGTTCTGAGGAGGAAGGGGAGCGGGGTCACCAGCAGCAGCA
GCACCACCAGCAGAAGGGGGAAGATCGGCAGCAGCTGGAGGGGGAAAAGC
AGCAGCAGGAGAGAAATAGGCAAGATAAAGGCTGCCGACACGGGAAGGAA
AAAGAGGAACGGAAATTCCATCAGAATGACGGGCGGAAGGGACGGAGGGG
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAGGAGGGG
TGTACGCTGTCGTCCGGGCCCAGCAGCAGCATATTGCTACGTTGCAGCAA
CAGGTGAAGGCACTGGAAGCCCGTCTCTCGATGGCTTTGTCGTTGTTGCC
AGGTGCTTCTGCGGCTGCTGGTCGTGACGCGGCTGTTGCTGCTGGTAGTG
GTGCGGTGAGTGGAGAATCAGCAGCAGAGGAAACGGCGACTACAGCGAGT
GTCAGCGAGGCAATGGAGTTGTCTTGTGCTCCTGGTTCTCCTGCTGTTTC
TCTTCGTTCTTTTCCTTCTAGTGAGGAGGAGGTGTTGCAGCATGAAGGGC
ACGAGGATGTTGGAAATGCCTCTGTGTTCATCCAATCCTCAGGGCCCCTG
TGTGAAAGCGCTACCATTCAAACAGACGTCCAGGTGGACGAGGTCGGATG
GGAGGAGGAGGAGGAGAAAGGGAGGCAAGTTCCCACTTTCCCTGACCCGC
AGCAAATATCAAGCACTGGCGACGACGACGACATCGCTGCAACTCACGAG
GGAGGAAAAGTAGCAGCAGCAGCAGCAGCACCACCACCACCACCACCAGA
AGCAGCCGCGGCAGCAGAAAATGTGATAGCTTCAGATAGGCCAATGATGC
AGACGTTTCGTTTTTTTCCTCGCATGGAAGTGCCTCGGATTCTTTACACG
CCGCAAAGTGGGAAGGATGGCGAGGGGGGAACGGGGGGGCCCGTGGGAGA
GGAGGAGGCGGAGGAGGAGAAGGATGAGGAGGAGGAGGACGACGACGACA
ACGAAGAGAGCCCGTCTATTCTAATGATTGAACAGCGGTATTTGAGTGTG
AGAATGAGCAGTGACAGCAATTGCAGCTGCAGCAGCAGTATTGCTGGTTC
TAGTACTGGCGGCAGCAGCAGGAAGAGAACGACTTAGGCAACAGGACTGA
GATGAGAATGAGGGAAACGAGAAGGGGGAAAGTGGACGAAGAAGAAAAAG
ACAATTGAAGGGGGGGAAATGAAAGTGGAAAGACTGTGTGAAACTGAATC
TGGAAAACAAAGTAATGTG
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protein sequence of NO12G01030.1

>NO12G01030.1-protein ID=NO12G01030.1-protein|Name=NO12G01030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1155bp
MPAFGSCSPKQKPPSALRRPTPKKVASPPPPPPPASAAAHRRPPAAAAIL
SAPAVSRNQRHTVHVKSAYFPQDDEEEESSSCWDWEEGGSGSPWIAGGAR
GRQQDSILGKVKFPLVQKGANIHIEEENDKEENEVSFSFPATHEALWPRH
PHGQCEIVTLSARDVLAPLIFLPLQSLRILHARLLSLHSSASSEAAGVTH
TSAYYSPRSRSSAASPFPRILTVDTALFPTAACLRHLPPHSLIRSLAQPP
PFSLFLLQQQQQLQQQQQQQHPAAEEGKASGFTQTVVSLPLIHVNNEEEE
QQQLLQQQQQSYQALLATAQGSFLNEDEDEEGREGEKHHSAALFPSIRLF
AQIATPGTLTLRAEQVLPSLSLRFTPLPPLVSLNNILWRTLTTPPPPSSP
PSSSPSLSAAMANSGSSSSSQSSSTSCSTGYLTLTGTRRVVFLPSSTSSL
LPSQQPPPLVGVWVAGIEEIREGGKKEGGLIGHPCVFRAIMQYLLRDGGT
TGGREGRHVSMEEGTCLVACFAVAGGAPHFWEVKLKMSSPPTSLAHSYPS
VSYNLLDFAVDISLDMDIEEESGEEEGREGGMEGWRGGSDWDNVVVGHFR
ETACPIRAAAFLSAQQEQQQQQQQHHHHHHQQQQQQQQQQQQQQRQQQQQ
QQKTYKCQLTGKGENGGREGGNVCAQAAIVPTDPSSSCIHSYASCSSSPP
PSSSFSFRSFPSLLPREVVVEVERENVSCLTLESCLPASHSTTFTYLPPP
SSAAVATAGLRPPSAASSPAAAIFPSFSWCSEEEGERGHQQQQHHQQKGE
DRQQLEGEKQQQERNRQDKGCRHGKEKEERKFHQNDGRKGRRGEEEEEEE
EEEEEEGGGVYAVVRAQQQHIATLQQQVKALEARLSMALSLLPGASAAAG
RDAAVAAGSGAVSGESAAEETATTASVSEAMELSCAPGSPAVSLRSFPSS
EEEVLQHEGHEDVGNASVFIQSSGPLCESATIQTDVQVDEVGWEEEEEKG
RQVPTFPDPQQISSTGDDDDIAATHEGGKVAAAAAAPPPPPPEAAAAAEN
VIASDRPMMQTFRFFPRMEVPRILYTPQSGKDGEGGTGGPVGEEEAEEEK
DEEEEDDDDNEESPSILMIEQRYLSVRMSSDSNCSCSSSIAGSSTGGSSR
KRTT*
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Synonyms
Publications