NO12G00920, NO12G00920 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO12G00920 vs. NCBI_GenBank
Match: XP_005854167.1 (hypothetical protein NGA_0179802 [Nannochloropsis gaditana CCMP526] >XP_005854270.1 hypothetical protein NGA_0179801 [Nannochloropsis gaditana CCMP526] >EKU22088.1 hypothetical protein NGA_0179801 [Nannochloropsis gaditana CCMP526] >EKU22190.1 hypothetical protein NGA_0179802 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 282.7 bits (722), Expect = 1.300e-72 Identity = 129/186 (69.35%), Postives = 153/186 (82.26%), Query Frame = 0 Query: 122 MNVGFNDLLLLELPDSFYAIAKTNQGPYSCTEPVRTAYTKKFKSEEVHRYCDFDHYVYYAATDQALLDFVVPCSSCTHVLVTNGDNGYAPSFLEETRRQLTDLAIVAFIHMNRPQIPAIRIGGLDLGAVLMRVNVLDEGRKVFLTSLPVGAGPKEVHDADYWMVSNALDRGFSFSVLKDEVLMYHH 308 MNVGF+DL L+ELPD+FY K +CT+ VRT Y ++F ++EVHRYCDFDHYVYYAATD+AL FV+PC SCTHVLVTNGDNGYAPSFL+ET RQ DLAIV F H N+ Q P + +GGLDLGAVLMRV VLD GR++FL+SLPV AGPKEVHDADYWMV NAL+RG SF+V K+++LMYH+ Sbjct: 1 MNVGFDDLYLVELPDTFYEDVKLRDSRLTCTDAVRTRYVQEFNADEVHRYCDFDHYVYYAATDKALATFVLPCRSCTHVLVTNGDNGYAPSFLQETVRQSADLAIVGFTHRNQAQTPVLGVGGLDLGAVLMRVGVLDHGRRLFLSSLPVDAGPKEVHDADYWMVVNALERGLSFAVCKNQLLMYHN 186
BLAST of NO12G00920 vs. NCBI_GenBank
Match: EWM25935.1 (hypothetical protein Naga_100134g8 [Nannochloropsis gaditana]) HSP 1 Score: 275.4 bits (703), Expect = 2.100e-70 Identity = 141/230 (61.30%), Postives = 167/230 (72.61%), Query Frame = 0 Query: 1 MPPVWGFKPLIAGTLLLILSPIFLMKSFWSGEGGYLGTHRLGRGVDGRKSIPWVPKTDGAPSDPAHVRVVIRTQAREELQLRSLIYSLRAQGQRKKGVQVDFVLVPTEPASLHVYQHLRDEMNVGFNDLLLLELPDSFYAIAKTNQGPYSCTEPVRTAYTKKFKSEEVHRYCDFDHYVYYAATDQALLDFVVPCSSCTHVLVTNGDNGYAPSFLEETRRQLTDLAIVAFI 231 MPP GF +A L+LI+SP+ M++ LGT L R + + SIPWV +G P +PAHVRVVIRT ARE+LQLRSLIY LRAQ + + G + DFVLVPTEPASL YQ L +EMNVGF+DL L+ELPD+FY K +CT+ VRT Y ++F ++EVHRYCDFDHYVYYAATD+AL FV+PC SCTHVLVTNGDNGYAPSFL ET RQ DLAIV I Sbjct: 1 MPPPRGFLSFVAVALVLIMSPMLFMRNPAETYMNLLGTRGLRR--EAKMSIPWV--IEGEPREPAHVRVVIRTHAREQLQLRSLIYGLRAQSEGQAGFKADFVLVPTEPASLQTYQRLCNEMNVGFDDLYLVELPDTFYEDVKLRDSRLTCTDAVRTRYVQEFNADEVHRYCDFDHYVYYAATDKALATFVLPCRSCTHVLVTNGDNGYAPSFLRETVRQSADLAIVGGI 226
BLAST of NO12G00920 vs. NCBI_GenBank
Match: EWM29236.1 (hypothetical protein Naga_100119g17 [Nannochloropsis gaditana]) HSP 1 Score: 148.7 bits (374), Expect = 3.000e-32 Identity = 95/268 (35.45%), Postives = 132/268 (49.25%), Query Frame = 0 Query: 66 HVRVVIRTQAREELQLRSLIYSLRAQGQRKKG------VQVDFVLVPTEPASLHV--------YQHLRD----------EMNVGFNDLLLLELPDSFYAIAKTNQGPYSCTEPVRTAYTKKFKSEEVHRYCDFDHYVYYAATDQALLDFVVPCSSCTHVLVTNGDNGYAPSFLEETRRQLTDLAIVAFI-HMNRPQIPAIRIGGLDLGAVL-MRVNVLDEGRKVFLTSLPVGAGPKEVHDADYWMVSNALDRGFSFSVLKDEVLMYHH 308 HVRV+IR +E SLI+++RAQ Q + VDF LV TE L V ++ +RD ++ D+ + + SFYA+A PY C+ Y K V +CD+D++ YY ATD +LD + C+ CTHVLVTN DN Y P FL DL FI H R + R G +DLG VL + V+ G F+ SLP AGP+E HD DYW V L+ G + + L +++ +H+ Sbjct: 180 HVRVIIRVHHLQEAATHSLIWAMRAQPQAAQSQPGSPEFTVDFALVATEEQGLPVVHRIAEAEWRRVRDIDPLRSSDSLSVSPPAPDVFVADTTGSFYALASNRSAPYRCSAADEAEYYSKGGDYYVRLHCDYDNHAYYQATDVGMLDVLRGCAWCTHVLVTNSDNSYHPDFLLHALSPQADLVTTDFIDHGERVVVADWRWGEVDLGGVLASKAVVMKTGG--FIASLPPDAGPQETHDNDYWFVHRGLELG-ATTALVHKLMFFHN 444
BLAST of NO12G00920 vs. NCBI_GenBank
Match: EWM20344.1 (hypothetical protein Naga_100252g10 [Nannochloropsis gaditana]) HSP 1 Score: 99.8 bits (247), Expect = 1.600e-17 Identity = 78/316 (24.68%), Postives = 136/316 (43.04%), Query Frame = 0 Query: 49 KSIPWV-------PKTDGAPSDPAHVRVVIRTQAREELQLRSLIYSLRAQGQRKKG-----VQVDFVLVPTEPASLHVYQHLRDE--MNVG--FNDLLLLELPDSFYAIAKTNQGPYSCTEPVRTAYTKKFKSEEVHRYCDFDHYVYYAATDQALLDFVVPCSSCTHVLVTNGDNGYAPSFLEE----------------------------------TRRQLT-------DLAIVAFIHMNRPQIPAIRIGGLDLGAVLMRVNVLDEGRKVFLTSLPVGAGPKEVHDADYWMVSNALDRGFSFSVLKDEVLMYHH 308 +S PW+ P A + HVR +IR + ++ +++SL Q Q + +DF LVPTE + V + +N F + L+L +F+ +A P+ C++ + + + C +D++V+Y ATD A+ + + C+ CTH ++TNGDN Y P++L+E TRR L D+ F A +G +DLG +L +L + F+ SLP G+ ++ H+AD+ + AL G V+ +++L +H+ Sbjct: 67 ESKPWLGSQGLRAPSVSNATNIHHHVRFIIRVHHEQADLVKGMVHSLLYQQQLSVSFPYPTLSMDFALVPTEVRGIPVVDSIARYFWLNTAEPFPHVYALDLDQTFFDVAAERAAPFKCSKEEAREVANRAGKAAMIKICRYDNHVFYQATDVAVAE-LCRCTWCTHAVITNGDNCYHPNYLKETLLELDPPSDAQYGTVQERSDSSSGLKGQIRDKKTRRMLAWERGEQWDMVTTDFTTSGILSRGAWGLGFVDLGGILFSKRILMSAQG-FIASLPSGSRAEQAHNADWLFAARALRLGARAHVV-NQLLFFHN 379 The following BLAST results are available for this feature:
BLAST of NO12G00920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 4
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00920 ID=NO12G00920|Name=NO12G00920|organism=Nannochloropsis oceanica|type=gene|length=1193bpback to top protein sequence of NO12G00920.1 >NO12G00920.1-protein ID=NO12G00920.1-protein|Name=NO12G00920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=308bpback to top Synonyms
Publications
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