NO12G00750, NO12G00750 (gene) Nannochloropsis oceanica

Overview
NameNO12G00750
Unique NameNO12G00750
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1107
Alignment locationchr12:257342..258448 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:257342..258448 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019410Nicotinamide_N-MeTfrase-like
Homology
The following BLAST results are available for this feature:
BLAST of NO12G00750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR070ncniR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009983NSK009983Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G00750.1NO12G00750.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|633962gene_9986Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G00750.1NO12G00750.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G00750 ID=NO12G00750|Name=NO12G00750|organism=Nannochloropsis oceanica|type=gene|length=1107bp
ATGGCAGACAGCCCAGAAGAGGACGACGATGCGGTCGCATCTTTAGAGAA
TCTTTTCGATGACGAGAATCAACTGCCTCCACCTTTTCCCTTGCGGCCCC
TTGGAGCTCCATCCACCATGGTCATCCCTCTGTTCCAAGACGCACGCGAC
GCTCTCGGTGGACGTGTCTGGAAGGCTTCCCTCTTTCTAAAAAGATGTCT
TGAGCAGGAGAAAATCACACCAAGCCTGGGCGGGCTGGCGGTACTGGACG
TCGGCGCGGGGATTGGAGCATTGGGTCTAGCTTGTGCGCTCGCGCGCCCT
GTGCCTCCAGCCTTTGTGGCTTTGACAGATAAGCAATGCTTGATGCCTTT
ACTGTATCGAAATGTGGAAGTTGCCCGGCTAGTAGCGGATGGTGCTTCTC
CTGATGATGCTGTTGCTATTGCTGCCGCTGCTGCGGCTGGTAAAATCAGT
GGTGCTGCAGTGTTGGCGCCGCCGGTTGAGATTACCGCGATGGGTAAGGC
CGTTGTGGGAGGAGGGGGAGGAATAGATACGTATATAAAAATAAAAAATG
AGGAGAGACAAGTACCAAGAGACGAAAAAGGGCAGGAAAAAGGGGAAAAG
GGTGGAGGGCAAAGAGGTGCCTGTCGAGTAGTCGCCTCTCCCTTAGACTG
GTTAGAGCATGGCAATGGCCCCCAAAGCAAGGCTCTGCTTCACCTTCTCC
ACGCTGAGACAGGAAAGAGGCATTTTGATTTGATATTGGTAGCGGATTGT
GTGTATTACCCGCAATTGTATAGGCCATTGGTCGAGGCGTTGGCGGGAAT
GGCAGGTGAGGAAACGAAGGTGGCGATCGTGAATGATGACGGAAGGACGG
ATGCCGCTGGGGTGGAAAAAACCACAGGGAGGAGGTGGGATGAAGAGTTT
TTTGATTTACTGAAAGAGAAATTTATGTGGGGGAAGGAGGAGGGAGGGAA
GGAGGGGAAGGGAGAGGATAGGCTGTATCCCGAGGCGAAGAAAGAGGAGG
GGGGAGGGGGGCCGTTTCGAGTGGTGGTTGCGAAGAGGAGGAGAGTGGAG
GAGGAAAAGGAGGAAGAAAGGAGAGGAATGAGGGGGAAAGGAGAAAGACG
TGAGTGA
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protein sequence of NO12G00750.1

>NO12G00750.1-protein ID=NO12G00750.1-protein|Name=NO12G00750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=369bp
MADSPEEDDDAVASLENLFDDENQLPPPFPLRPLGAPSTMVIPLFQDARD
ALGGRVWKASLFLKRCLEQEKITPSLGGLAVLDVGAGIGALGLACALARP
VPPAFVALTDKQCLMPLLYRNVEVARLVADGASPDDAVAIAAAAAAGKIS
GAAVLAPPVEITAMGKAVVGGGGGIDTYIKIKNEERQVPRDEKGQEKGEK
GGGQRGACRVVASPLDWLEHGNGPQSKALLHLLHAETGKRHFDLILVADC
VYYPQLYRPLVEALAGMAGEETKVAIVNDDGRTDAAGVEKTTGRRWDEEF
FDLLKEKFMWGKEEGGKEGKGEDRLYPEAKKEEGGGGPFRVVVAKRRRVE
EEKEEERRGMRGKGERRE*
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Synonyms
Publications