NO12G00680, NO12G00680 (gene) Nannochloropsis oceanica

Overview
NameNO12G00680
Unique NameNO12G00680
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2917
Alignment locationchr12:238070..240986 -

Link to JBrowse

Properties
Property NameValue
DescriptionCoproporphyrinogen iii oxidase chloroplast
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:238070..240986 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006779porphyrin-containing compound biosynthetic process
GO:0055114oxidation-reduction process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004109coproporphyrinogen oxidase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036406Coprogen_oxidase_aer_sf
IPR001260Coprogen_oxidase_aer
Homology
BLAST of NO12G00680 vs. NCBI_GenBank
Match: XP_002182874.1 (coproporphyrinogen III oxidase [Phaeodactylum tricornutum CCAP 1055/1] >EEC45610.1 coproporphyrinogen III oxidase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 515.4 bits (1326), Expect = 1.700e-142
Identity = 236/304 (77.63%), Postives = 263/304 (86.51%), Query Frame = 0
Query:  111 MRRRFEKACREAQLAICKAVEECDGGAKFHSDAWIRADGGGGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLDTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVFFDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHHPAEGSPEAEIMDAFKNAREWV 415
            MR RFEK CREAQ++I KA+EE DG   F  D W RA+GGGG+S VL  GKV+EKAG NLSVVYGSMPQEALQAATERGVDRAKGM PGERVPFFACGLSSVMHP+NPH PTMHFNYRYFET+GG WWFGGG DITPSYL+ DDMKHFHGT KEVCDKHD  YY +FK WAD YF+I+HR ETRGLGG+FFDDQN+K+PDEHFAFSEE +N+V KAY PI+EKHK+D +TE+QK+WQ +RRGRY EFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDH    GSPEAE ++A ++ R WV
Sbjct:    1 MRSRFEKLCREAQISITKAIEEIDGEGVFREDCWTRANGGGGMSRVLSGGKVFEKAGVNLSVVYGSMPQEALQAATERGVDRAKGMAPGERVPFFACGLSSVMHPKNPHAPTMHFNYRYFETDGGVWWFGGGTDITPSYLNEDDMKHFHGTYKEVCDKHDPEYYEEFKAWADRYFVIQHRNETRGLGGIFFDDQNNKTPDEHFAFSEEAVNSVIKAYGPIVEKHKDDPYTEKQKQWQLMRRGRYVEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHQVEPGSPEAEFLEACRHPRSWV 304          
BLAST of NO12G00680 vs. NCBI_GenBank
Match: APF46168.1 (plastid coproporphyrinogen oxidase isoform 1, partial [Eutreptiella braarudii])

HSP 1 Score: 508.1 bits (1307), Expect = 2.600e-140
Identity = 244/386 (63.21%), Postives = 285/386 (73.83%), Query Frame = 0
Query:   32 PRAMTTGYLHQPMASVGG---SRRLNALAMARRTAHLYQRSVVAMSAAAPTKKEETGIGWNSHKPVTEVPESLVRGVEGNESMRRRFEKACREAQLAICKAVEECDGGAKFHSDAWIRADGGGGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLDTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVFFDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHHPAEGSPEAEIMDAFKNAREWV 415
            P A  T +L     S  G    R+L          H  ++S  AM A A            +H+ V + P+ L R  E + SMRR+FE+ CR+ Q  IC AVEECDG  KF  DAWIR DGGGGIS V+  GKVWEKAG NLSVVYG+MPQEAL AAT RG +  K +KPG+RVPFFACGLS VMHPRNPHCPTMHFNYRYFET+GGAWWFGGG DITP+YLD +DMKHFHGT K  CDKHD  +Y K+KKWADEYF+I+HR ETRGLGG+FFDD ND+ P+    FSEE L +V  AY+PII K+K   F++++K+WQ +RRGRY EFNLVYDRGT+FGLKTGGRIESILMSLPETARWEYDHHP  GSPEA+IM+ F+N+REWV
Sbjct:   85 PWAAATAFLAGCAISAFGLVAQRKLQKTGSWTPGPHATEQSDFAMCAIA------------AHQNVDKAPDVLSRDKEDSTSMRRQFEELCRKMQGEICAAVEECDGEGKFREDAWIREDGGGGISRVMSGGKVWEKAGVNLSVVYGTMPQEALAAATARGAEYTKDLKPGDRVPFFACGLSCVMHPRNPHCPTMHFNYRYFETDGGAWWFGGGTDITPAYLDEEDMKHFHGTYKAACDKHDPEFYAKYKKWADEYFVIQHRKETRGLGGIFFDDLNDRDPETIIKFSEECLKSVVPAYIPIINKNKEKEFSQKEKEWQLMRRGRYVEFNLVYDRGTIFGLKTGGRIESILMSLPETARWEYDHHPEPGSPEAKIMECFQNSREWV 458          
BLAST of NO12G00680 vs. NCBI_GenBank
Match: XP_002287097.1 (coproporphyrinogen III oxidase, chloroplast targeted [Thalassiosira pseudonana CCMP1335] >EED96738.1 coproporphyrinogen III oxidase, chloroplast targeted [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 507.3 bits (1305), Expect = 4.500e-140
Identity = 230/295 (77.97%), Postives = 256/295 (86.78%), Query Frame = 0
Query:  120 REAQLAICKAVEECDGGAKFHSDAWIRADGGGGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLDTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVFFDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHHPAEGSPEAEIMDAFKNAREWV 415
            REAQ++I  A+ E DG A F+ D W RA+GGGG+S VL DG VWEKAG NLSVVYGSMPQEALQAATERGVDRAKGM PGERVPFFACGLS VMHPRNP+CPTMHFNYRYFET+GG WWFGGG DITPSYL+ DDMKHFHGT KEVCDKHD  +YPKFK+WAD YF+I HR ETRGLGG+FFDD ND+ P++ F F+++ +N+V  AY PIIE HK+D FT+ +K WQQIRRGRY EFNLVYDRGT+FGLKTGGRIESILMSLPETARWEYDHHP EGSPEAEIMD FK+AREWV
Sbjct:    3 REAQISITDAIAEIDGKAVFNEDCWTRANGGGGMSRVLKDGAVWEKAGVNLSVVYGSMPQEALQAATERGVDRAKGMAPGERVPFFACGLSCVMHPRNPYCPTMHFNYRYFETDGGVWWFGGGTDITPSYLNLDDMKHFHGTYKEVCDKHDPEFYPKFKEWADRYFVISHRNETRGLGGIFFDDLNDREPEKLFEFAKDAVNSVVPAYGPIIEAHKDDPFTQREKDWQQIRRGRYVEFNLVYDRGTIFGLKTGGRIESILMSLPETARWEYDHHPEEGSPEAEIMDCFKHAREWV 297          
BLAST of NO12G00680 vs. NCBI_GenBank
Match: APF46133.1 (plastid coproporphyrinogen oxidase isoform 2, partial [Trachelomonas volvocina])

HSP 1 Score: 505.0 bits (1299), Expect = 2.200e-139
Identity = 242/372 (65.05%), Postives = 277/372 (74.46%), Query Frame = 0
Query:   45 ASVGGSRRLNALAMA-RRTAHLYQRSVVAMSAAAPTKKEETGIGWNSHKPVTEVPESLVRGVEGNESMRRRFEKACREAQLAICKAVEECDGGAKFHSDAWIRADGGGGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLDTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVFFDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIRRGRYTEFNLVYDRGTVFGLKTG-GRIESILMSLPETARWEYDHHPAEGSPEAEIMDAFKNAREWV 415
            A +   RR N    A    A  ++   VAM  A   K+       N H  V E P  L +  + N  +RR+FE   R  Q  +CKA+EECDGGAKF +DAW+R  GGGGIS VLG GKVWEKAG NLSV+YG+MP E +QAA ER    AK +KPGER+ FFACGLS VMHPRNPHCPTMHFNYRYFETE G WWF GG DITP YLD DDMKHFHG  K+VCDKHD  +YPKFKKWADEYF+IKHRGETRGLGG+F+DD ND+ P + FAFSEE L+ V  AY+PIIEKHKND FTEEQK+WQ +RRGRY EFNL+YDRGT+FGLKTG GR+ESI+M+LPE ARWEYDHHPA GS E +IM  FKN R+WV
Sbjct:   45 AGIAAQRRANVTTAAPAPMAGGWEEESVAMFTATAEKQNP-----NKHIDVAEPPPVLGKDTDPN-CLRRKFEAMLRRGQDKVCKAIEECDGGAKFQTDAWVRESGGGGISRVLGGGKVWEKAGVNLSVIYGTMPSETVQAARERQAAYAKDLKPGERINFFACGLSCVMHPRNPHCPTMHFNYRYFETETGDWWFAGGTDITPVYLDEDDMKHFHGVYKKVCDKHDPAFYPKFKKWADEYFIIKHRGETRGLGGIFYDDLNDRDPWKIFAFSEECLDNVVPAYVPIIEKHKNDTFTEEQKRWQLLRRGRYAEFNLIYDRGTIFGLKTGIGRMESIMMTLPEVARWEYDHHPAPGSEEEKIMKLFKNPRDWV 410          
BLAST of NO12G00680 vs. NCBI_GenBank
Match: APF46167.1 (plastid coproporphyrinogen oxidase isoform 1, partial [Eutreptia viridis])

HSP 1 Score: 503.4 bits (1295), Expect = 6.500e-139
Identity = 231/321 (71.96%), Postives = 261/321 (81.31%), Query Frame = 0
Query:   94 VTEVPESLVRGVEGNESMRRRFEKACREAQLAICKAVEECDGGAKFHSDAWIRADGGGGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLDTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVFFDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHHPAEGSPEAEIMDAFKNAREWV 415
            V +VPE L R  E   SMRR+FE   R+ QL I  A+EECDG AKF  DAW+R DGGGGISMVL +GKVWEKAG NLSVVYG+MPQEAL AAT RG +  K + PG+RVPFFACGLSSVMHPRNPHCPTMHFNYRYFET GGAWWFGGG DITP+YLD DD++HFHGT KEVCDKHD  ++ K+KKWADEYF+IKHRGETRGLGG+FFDD ND+  +    FS + L+ V  AY+PII K+K   FT EQK+WQ IRRGRY EFNLVYDRGT+FGLKTGGRIESILMSLPETARWEYDH P  GSPE +IM+A +N R+WV
Sbjct:   84 VKKVPERLGRAEEDENSMRRKFEVLLRKMQLEITSAIEECDGEAKFRQDAWVREDGGGGISMVLANGKVWEKAGVNLSVVYGTMPQEALAAATARGAEFTKDLAPGDRVPFFACGLSSVMHPRNPHCPTMHFNYRYFETSGGAWWFGGGTDITPAYLDEDDIRHFHGTYKEVCDKHDPEFFAKYKKWADEYFVIKHRGETRGLGGIFFDDLNDRDKETIMKFSADCLSAVVPAYVPIINKNKEKEFTPEQKEWQLIRRGRYVEFNLVYDRGTIFGLKTGGRIESILMSLPETARWEYDHSPKPGSPEEKIMEALRNPRDWV 404          
BLAST of NO12G00680 vs. NCBI_GenBank
Match: APF46132.1 (plastid coproporphyrinogen oxidase isoform 1, partial [Trachelomonas volvocina])

HSP 1 Score: 501.5 bits (1290), Expect = 2.500e-138
Identity = 228/326 (69.94%), Postives = 263/326 (80.67%), Query Frame = 0
Query:   90 SHKPVTEVPESLVRGVEGNESMRRRFEKACREAQLAICKAVEECDGGAKFHSDAWIRADGGGGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLDTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVFFDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIRRGRYTEFNLVYDRGTVFGLKTG-GRIESILMSLPETARWEYDHHPAEGSPEAEIMDAFKNAREWV 415
            +H PV E P  L +  + N  +RR+FE   R  Q  +CKA+EECDGGAKF +DAW+R  GGGGI+ VLG GKVWEKAG NLSV+YG+MP E +QAA ER    AK +KPGER+ FFACGLS VMHPRNPHCPTMHFNYRYFETE G WWF GG DITP YLD +DMKHFHG  K+VCDKHD  +YPKFKKWADEYF+IKHRGETRGLGG+F+DD ND+ P + FA+SEE L+ V  AY+PIIEKHKND FTEEQK+WQ +RRGRY EFNL+YDRGT+FGLKTG GR+ESI+M+LPE ARWEYDHHPA GS E +IM  FKN R+WV
Sbjct:   57 AHIPVAEPPPVLGKDTDPN-CLRRKFEAMLRRGQDKVCKAIEECDGGAKFQTDAWVREGGGGGITRVLGGGKVWEKAGVNLSVIYGTMPSETVQAARERQAAYAKDLKPGERINFFACGLSCVMHPRNPHCPTMHFNYRYFETEAGDWWFAGGTDITPVYLDEEDMKHFHGVYKKVCDKHDPAFYPKFKKWADEYFIIKHRGETRGLGGIFYDDLNDRDPWKIFAYSEECLDNVVPAYVPIIEKHKNDTFTEEQKRWQLLRRGRYAEFNLIYDRGTIFGLKTGIGRMESIMMTLPEVARWEYDHHPAPGSEEEKIMKLFKNPRDWV 381          
BLAST of NO12G00680 vs. NCBI_GenBank
Match: APF46172.1 (plastid coproporphyrinogen oxidase isoform 4, partial [Euglenaformis proxima])

HSP 1 Score: 499.6 bits (1285), Expect = 9.400e-138
Identity = 242/360 (67.22%), Postives = 275/360 (76.39%), Query Frame = 0
Query:   57 AMARRTAHLYQRSVVAMSAAAPTKKEETGIGWNSHKPVTEVPESLVRGVEGNE-SMRRRFEKACREAQLAICKAVEECDGGAKFHSDAWIRADGGGGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGG-AWWFGGGMDITPSYLDTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVFFDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIRRGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHHPAEGSPEAEIMDAFKNAREWV 415
            A+A   AHL  R+      +   ++  + +    H  V +VP   V G + NE +MRRRFE  CR AQ  IC AVEECDG  KF +DAW+RADGGGGIS VL  GKVWEKAG NLSVVYG+MP EAL AATER  +  K +KPG+RVPFFACGLS VMHPRNPHCPTMHFNYRYFETEGG AWWFGGG DITP+YLD DDMKHFHGT K+VCD+HD  +Y K+KKWAD+YF IKHR ETRGLGG+FFDD ND+ P    AFS + L  V  AYLPIIEK+KN AFTE+QK+WQ +RRGRY EFNLVYDRGT+FGLKTGGRIESILMSLPETARWEYDHHP   S E +I+ AF+  R WV
Sbjct:   31 ALAALAAHL--RTNNTFKTSGLDEEAFSMLAVEGHTAVGDVP--AVLGKDKNEWTMRRRFETLCRRAQDKICAAVEECDGEGKFRTDAWVRADGGGGISRVLAGGKVWEKAGVNLSVVYGTMPMEALSAATERSAEYVKNLKPGDRVPFFACGLSCVMHPRNPHCPTMHFNYRYFETEGGEAWWFGGGTDITPAYLDEDDMKHFHGTYKKVCDRHDPNFYAKYKKWADDYFSIKHRKETRGLGGIFFDDLNDRDPMTIIAFSGDCLENVVPAYLPIIEKNKNKAFTEDQKRWQLMRRGRYVEFNLVYDRGTIFGLKTGGRIESILMSLPETARWEYDHHPEPNSEEEKILKAFQQPRSWV 386          
BLAST of NO12G00680 vs. NCBI_GenBank
Match: APF46109.1 (plastid coproporphyrinogen oxidase isoform 1, partial [Colacium vesiculosum])

HSP 1 Score: 496.1 bits (1276), Expect = 1.000e-136
Identity = 238/359 (66.30%), Postives = 275/359 (76.60%), Query Frame = 0
Query:   57 AMARRTAHLYQRSVVAMSAAAPTKKEETGIGWNSHKPVTEVPESLVRGVEGNESMRRRFEKACREAQLAICKAVEECDGGAKFHSDAWIRADGGGGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLDTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVFFDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIRRGRYTEFNLVYDRGTVFGLKTG-GRIESILMSLPETARWEYDHHPAEGSPEAEIMDAFKNAREWV 415
            A+A   A L +RS  A  AA       + +G      + EVPE L R  +  + +RRRFE   R  Q +ICKA+E+CDG  KF  DAW+R  GGGGISMV+  GKVWEKAG NLSV+YG MP E L AA ER    AK +KPGERVPFFACGLS VMHPRNPHCPTMHFNYRYFETE G WWFGGG DITP+YLD DDMKHFHGTLK+VCD+HD  Y+ KFKKWAD+YF+IKHRGETRGLGG+F+DD ND+ P+  F FSE+ LN V  AY+PIIEKHKND FTEEQK+WQ +RRGRY EFNLVYDRGT+FGLKTG GR+ESI+M+LPETARWEY+H PA GS E ++M AFK  R+WV
Sbjct:   31 AVAVAGAVLQRRSAPAPPAAF------SMLGGAGTVELKEVPEVLGRDTD-PDCLRRRFEAMLRRGQASICKAIEDCDGEGKFKPDAWMREGGGGGISMVMAGGKVWEKAGVNLSVIYGMMPTETLVAARERQAGYAKDLKPGERVPFFACGLSCVMHPRNPHCPTMHFNYRYFETEAGDWWFGGGTDITPAYLDEDDMKHFHGTLKQVCDRHDPAYHAKFKKWADDYFVIKHRGETRGLGGIFYDDLNDRDPEIIFKFSEDCLNHVVAAYVPIIEKHKNDTFTEEQKQWQLMRRGRYVEFNLVYDRGTIFGLKTGIGRVESIMMTLPETARWEYNHQPAPGSEEDKVMQAFKTPRDWV 382          
BLAST of NO12G00680 vs. NCBI_GenBank
Match: APF46131.1 (plastid coproporphyrinogen oxidase isoform 1, partial [Trachelomonas ellipsoidalis])

HSP 1 Score: 494.2 bits (1271), Expect = 4.000e-136
Identity = 236/395 (59.75%), Postives = 283/395 (71.65%), Query Frame = 0
Query:   21 STSNALASSARPRAMTTGYLHQPMASVGGSRRLNALAMARRTAHLYQRSVVAMSAAAPTKKEETGIGWNSHKPVTEVPESLVRGVEGNESMRRRFEKACREAQLAICKAVEECDGGAKFHSDAWIRADGGGGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLDTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVFFDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIRRGRYTEFNLVYDRGTVFGLKTG-GRIESILMSLPETARWEYDHHPAEGSPEAEIMDAFKNAREWV 415
            S + A+     P A    ++     ++ G   +     ++  +      + AM A AP            H+ V E P  L +  + N  +RR+FE   R+ Q  +C A+EECDGGAKF +DAW+R  GGGGI+ VLG GKVWEKAG NLSV+YG MP E + AA ER  + AK +KPGER+PFFACGLS VMHPRNPHCPTMHFNYRYFETE G WWF GG DITP+YLD +DMKHFHGT K+VCDKHD  +Y KFKKWADEYF+IKHR ETRGLGG+F+DD ND+ P + FAFSEE LN V  AY+PIIEKHKND+FTEEQK+WQ IRRGRY EFNL+YDRGT+FGLKTG GR+ESI+M+LPE ARWEYDHHPA GS E +I+  F+  REWV
Sbjct:    4 SDTPAIEQGTSPWASAVAFITGCAMAMAGVAVMRRQTTSKHLSPPSAEDLFAMLAVAPA----------VHQEVAEPPAVLGKDTDEN-CLRRKFEAMLRKGQDKVCAAIEECDGGAKFRTDAWVREGGGGGITRVLGGGKVWEKAGVNLSVIYGMMPSETIAAARERQANYAKDLKPGERIPFFACGLSCVMHPRNPHCPTMHFNYRYFETEAGDWWFAGGTDITPAYLDEEDMKHFHGTYKKVCDKHDPNFYAKFKKWADEYFIIKHRNETRGLGGIFYDDLNDRDPWKIFAFSEECLNNVVAAYVPIIEKHKNDSFTEEQKRWQLIRRGRYAEFNLIYDRGTIFGLKTGIGRMESIMMTLPEVARWEYDHHPAPGSEEEKILKLFQKPREWV 387          
BLAST of NO12G00680 vs. NCBI_GenBank
Match: APF46119.1 (plastid coproporphyrinogen oxidase isoform 1, partial [Euglena viridis])

HSP 1 Score: 491.1 bits (1263), Expect = 3.300e-135
Identity = 227/325 (69.85%), Postives = 256/325 (78.77%), Query Frame = 0
Query:   91 HKPVTEVPESLVRGVEGNESMRRRFEKACREAQLAICKAVEECDGGAKFHSDAWIRADGGGGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGMKPGERVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYLDTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVFFDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIRRGRYTEFNLVYDRGTVFGLKTG-GRIESILMSLPETARWEYDHHPAEGSPEAEIMDAFKNAREWV 415
            H+ V E P  L R  + N  +RRRFE   R  Q  IC A+E CDG AKF  DAW+R  GGGGIS VL +GKVWEKAG NLSV+YG+MP E L AA ER  + AK +  GERVPFFACGLS VMHPRNPHCPTMHFNYRYFETE G WWFGGG DITPSYLD DDMKHFHG  K+ CD HD  +YPKFKKWADEYFLIKHRGETRGLGG+FFDD ND+ P++ FAF+EE L  V  AY+PIIEKHKND FTEEQK+WQ +RRGRY EFNL+YDRGT+FGLKTG GR+ESI+M+LPE ARWEY+HHPA GS E +IM  F+  REW+
Sbjct:   89 HQDVAEPPAVLGRDTDAN-CLRRRFEAMLRRGQDQICAAIEACDGEAKFQPDAWVREGGGGGISRVLANGKVWEKAGVNLSVIYGTMPSETLAAARERQANYAKDVPAGERVPFFACGLSCVMHPRNPHCPTMHFNYRYFETEAGDWWFGGGTDITPSYLDEDDMKHFHGVYKKACDNHDADFYPKFKKWADEYFLIKHRGETRGLGGIFFDDLNDRDPEKIFAFAEECLANVVPAYVPIIEKHKNDLFTEEQKRWQLLRRGRYVEFNLIYDRGTIFGLKTGIGRMESIMMTLPEVARWEYNHHPALGSEEEKIMKCFQTPREWL 412          
The following BLAST results are available for this feature:
BLAST of NO12G00680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002182874.11.700e-14277.63coproporphyrinogen III oxidase [Phaeodactylum tric... [more]
APF46168.12.600e-14063.21plastid coproporphyrinogen oxidase isoform 1, part... [more]
XP_002287097.14.500e-14077.97coproporphyrinogen III oxidase, chloroplast target... [more]
APF46133.12.200e-13965.05plastid coproporphyrinogen oxidase isoform 2, part... [more]
APF46167.16.500e-13971.96plastid coproporphyrinogen oxidase isoform 1, part... [more]
APF46132.12.500e-13869.94plastid coproporphyrinogen oxidase isoform 1, part... [more]
APF46172.19.400e-13867.22plastid coproporphyrinogen oxidase isoform 4, part... [more]
APF46109.11.000e-13666.30plastid coproporphyrinogen oxidase isoform 1, part... [more]
APF46131.14.000e-13659.75plastid coproporphyrinogen oxidase isoform 1, part... [more]
APF46119.13.300e-13569.85plastid coproporphyrinogen oxidase isoform 1, part... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR070ncniR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G00680.1NO12G00680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|610333gene_9981Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100665g2gene4572Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G00680.1NO12G00680.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G00680 ID=NO12G00680|Name=NO12G00680|organism=Nannochloropsis oceanica|type=gene|length=2917bp
TAGCATGCATATGTCTCGTGCCCCCGCCCTCCGTCGCACAGGGACCCACT
CCCACATGGTACTTGTTTCCCGCCTGCAAGGCCATTACTACGAGATATCC
TTGAATGTGACCATTCCCTCTACCTTTTTGTGATTCTTTTCATGTCTGTG
TGACCATTGCTAGCCGTGGAAAACCAAAGTATCTATCCTGTTGCACATGT
TGCAGCATCCTGCCCTTCAAGTGCTCCATATACTGCGCCCCCTTCTCTTC
CATTTTGCTTTGTCCCCCCATGCAGTTACGACCAACGACGCTCCTTACCA
CCCTCACCATTACTGTAATTTCTTCCTTCTCATCTTATAGGTCAAGCGAG
ACCCCTTAAAAAAATGCGTGCGAGCCTCGCGACGGCCACGACGGCCGCAG
CCGTGCTGCTCCTAGCACTTCCGAGCACGTCCAACGCCCTCGCTTCCTCC
GCCCGTCCCCGTGCCATGACAACCGGATACCTTCACCAACCCATGGCAAG
CGTGGGGGGCAGCCGCCGCTTGAATGCCTTGGCAATGGCCCGTCGCACCG
CTCACTTGTACCAACGCAGCGTCGTGGCCATGTCAGCCGCCGCCCCCACC
AAGAAGGAAGAGACGGGCATCGGGTGGAACTCACATAAGCCCGTGACTGA
AGTGCCCGAATCCTTGGTCCGTGGCGTGGAAGGAAATGAGAGCATGCGTC
GCCGGTTTGAGAAGGCCTGCCGGGAGGCGCAGgtagggagagaggaaggg
agggagggagggaggaggaaaccatatgttgcagcaatgggggggtatat
gcatgttcgggggcaaaccacccacgagaggcaatacacagacacatcag
accatcagtccatccaccttccccgtgcaatcttttactcaagcacactt
caccgacgaggtctctacctctgaagtcgtcgaggaaagcgacagaaggg
cactgggtttctccgtccctcccgatttaacgccctgccgtttcgacaca
tgcacaactcacgctttcactcctctcattcattcgcctgtccttccccc
ccccttccccttctgtcaccttccgttctcgtcaaaagTTGGCCATCTGC
AAGGCCGTGGAAGAATGCGACGGGGGTGCCAAGTTCCATTCCGACGCCTG
GATTCGTGCCGATGGCGGGGGAGGGATATCAATGGTCCTCGGTGATGGGA
AGGTCTGGGAGAAGGCAGGTTGTAACCTGTCGGTGGTGTATGGGAGCATG
CCTCAGGAGGCGCTGCAGGCGGCGACGGAGAGGGGGGTAGATAGGGCGAA
GGGGATGAAGCCGGgtgagtgccgagagagagggagggagggaatgagta
ccgatgttggcgtgtgagcataaagagagctaagcaactgcacgtctgtg
gggaggggatatatgtggggggatgtacgcatgggtgtgggcggctttta
ccggcccattcgcaatctttttctcatgcattaatgcggtcttttctcta
tgccaatacaatacacactcaaagatataaatatgggtagcacgacaaac
acccacttactaatactcactaacacacacaaacagGCGAGCGGGTGCCT
TTCTTTGCCTGCGGTTTGAGCTCCGTCATGCACCCTAGGgtaggtacata
tcaaatcaaaccaaaggagggaggagaggaggcagagagggatggaggat
gaagctggtaatgccattggaaaagggttgacgcccatgtaatttgtgtc
ttcagtgttgactgctgaaaccggaaacaacattctgggctaacctcacc
gatttcttgccccctccctccctccctcccttcttcccagAACCCGCACT
GTCCGACCATGCACTTCAACTACCGTTACTTCGAGACAGAGGGCGGGGCT
TGGTGGTTCGGCGGGGGCATGGACATAACTCCCTCCTACCTGGACACCGA
CGACATGAAGCATTTCCACGGCACCTTGAAGGAAGTGTGCGACAAGCACG
ACGAGGGGTATTACCCCAAATTTAAAAAATGGGCCGACGAATATTTTTTG
ATCAAGCACAGGGGCGAGACGCGCGGCTTGGGTGGTGTTTTTTTCGACGA
CCAGAACGATAAGTCTCCTGATGAGCATTTCGCCTTTTCGGAGGAGATGC
TGAATACGGTGACTAAGGCGTATTTGCCCATCATCGAGAAGCATAAGAAC
GATGCCTTCACCGAGGAACAGAAGAAGTGGCAGCAGATCCGGCGTGGCCG
TTACACGGAGTTTAATTTGGTGTATGACAGAGGGACGGTGTTCGGGTTAA
AGACGGGAGGGAGGATTGAGAGTATCCTCATGTCGCTGCCGGAGACGGCT
CGATGGGAGTATGACCACCACCCGGCGGAAGGGAGCCCAGAGGCGGAGAT
CATGGATGCGTTTAAGAACGCGAGGGAATGGGTTTGAGGAGGAGGGAGGG
AGGAAGGGAGGAAGGGAGGGAGCAGAGGAGCGTTGTGGTGAGGGAGGAGA
ATGGGATAACAACGTTTGGAGAAAAGTTCGATGCGCCTGAAGAGAGGATT
CGAAAGGGCTCTTGATATGGTTACGCAGGATAAAGGAGGAGAAGGAGGAG
AAGGAGAAGGAGGAGGATAGGGGGCGTGAAGGCGCCAAGAAAGAACAACA
AGCACAAAGATCAGCTCCAACAACAAACTCAAGCACAACTACAAAGAAGA
AAAGGGAAATAACGATCCTGAAGGAGGCAGCATCACACGGCCCAAATCAC
GTAGATCACATTCAAATAACGAATTCACAGCCTTCTCCTCTTTCGATCTT
CTTCTGCGCACTCTCTGGATTGAACGACCGCTATCTCTCGCCAGCTGTTC
GAGGTAATGCTGTTCGTTGTACGACCCGTCGAAGAGACCGACGATGAGAA
ATAAGGCACTGACGCAT
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protein sequence of NO12G00680.1

>NO12G00680.1-protein ID=NO12G00680.1-protein|Name=NO12G00680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=415bp
MRASLATATTAAAVLLLALPSTSNALASSARPRAMTTGYLHQPMASVGGS
RRLNALAMARRTAHLYQRSVVAMSAAAPTKKEETGIGWNSHKPVTEVPES
LVRGVEGNESMRRRFEKACREAQLAICKAVEECDGGAKFHSDAWIRADGG
GGISMVLGDGKVWEKAGCNLSVVYGSMPQEALQAATERGVDRAKGMKPGE
RVPFFACGLSSVMHPRNPHCPTMHFNYRYFETEGGAWWFGGGMDITPSYL
DTDDMKHFHGTLKEVCDKHDEGYYPKFKKWADEYFLIKHRGETRGLGGVF
FDDQNDKSPDEHFAFSEEMLNTVTKAYLPIIEKHKNDAFTEEQKKWQQIR
RGRYTEFNLVYDRGTVFGLKTGGRIESILMSLPETARWEYDHHPAEGSPE
AEIMDAFKNAREWV*
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Synonyms
Publications