NO12G00480, NO12G00480 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G00480 vs. NCBI_GenBank
Match: OQR98094.1 (hypothetical protein ACHHYP_09215 [Achlya hypogyna]) HSP 1 Score: 99.8 bits (247), Expect = 1.700e-17 Identity = 56/163 (34.36%), Postives = 91/163 (55.83%), Query Frame = 0 Query: 41 VIFKLALLPHAMEDMEQHVRSKLHTLLMKYNEDAGGVLLAIYHIRQPPARRFATILHDLPFLHVQVEAMALVFTPTPGSVVTGEVIKVTGTHVALLVYGLFNAAIAREDMPDAFEYVSGRGEWVCNGGEGRSEGRFALGEQVKFRVVRVHEAAGLLALDGSMR 204 ++ +L P + D ++ + +L+ +LMKY E GV+LA I+ + I+++ P++HV+V ALVF P G ++ V KV +H+ LL+ G+FN +IA DMP + + W+ G AL +V F VVRVH A G+++++GSMR Sbjct: 9 LVMSCSLAPCHIHDAKKGLEEQLNLMLMKYCEPVEGVVLAFDGIKL--LNPYGHIINETPYIHVKVATEALVFRPKAGMTLSANVNKVGSSHIGLLLAGVFNVSIAAADMPKGYAHSYSDDAWINEDG-----ATIALESEVSFTVVRVHVAHGVISIEGSMR 164
BLAST of NO12G00480 vs. NCBI_GenBank
Match: GAX99171.1 (Hypothetical protein PINS_007012 [Pythium insidiosum]) HSP 1 Score: 92.8 bits (229), Expect = 2.100e-15 Identity = 54/160 (33.75%), Postives = 93/160 (58.13%), Query Frame = 0 Query: 45 LALLPHAMEDMEQHVRSKLHTLLMKYNEDAGGVLLAIYHIR-QPPARRFATILHDLPFLHVQVEAMALVFTPTPGSVVTGEVIKVTGTHVALLVYGLFNAAIAREDMPDAFEYVSGRGEWVCNGGEGRSEGRFALGEQVKFRVVRVHEAAGLLALDGSMR 204 ++LLP + D + ++ LLM+Y++ GV+L+ ++R + P+ IL++ P++H +V A ALVF P G ++G V K+ HV LL+ G+FN ++A ++P YV E G +G + ++GE + +V RVH A G++A++ SMR Sbjct: 15 VSLLPCHIGDARLGIDQEMTALLMRYSDKLEGVILSFSNVRLEKPS---GHILNEQPYIHCKVIADALVFQPRVGMTLSGVVNKIGSNHVGLLIAGVFNGSVAASELPKG--YVHNYAEDAWKGADGTT---ISVGETITVKVARVHVAGGMIAIEASMR 166
BLAST of NO12G00480 vs. NCBI_GenBank
Match: CCA17774.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 87.0 bits (214), Expect = 1.200e-13 Identity = 46/161 (28.57%), Postives = 88/161 (54.66%), Query Frame = 0 Query: 45 LALLPHAMEDMEQHVRSKLHTLLMKYNEDAGGVLLAI--YHIRQPPARRFATILHDLPFLHVQVEAMALVFTPTPGSVVTGEVIKVTGTHVALLVYGLFNAAIAREDMPDAFEYVSGRGEWVCNGGEGRSEGRFALGEQVKFRVVRVHEAAGLLALDGSMR 204 L L P + D Q ++ +L+ +M+YNE GV+L H+ P + I+ D P++H ++ A ALVF P G ++ ++ K+ H+ +L G+FN ++A ++P+ F Y + W+ G++ + + V ++ RV A G+++++GSM+ Sbjct: 17 LTLSPCHLSDPLQGIQQELNGSVMQYNETLKGVILCFNSIHLGDP----YGHIISDSPYVHCKIIANALVFQPRQGMLLKAQINKIGSNHIGMLFVGVFNGSVAASELPEGFVYNYHKEAWI-----GKNGDTIKVDDVVTVKIQRVRVAGGMISIEGSMK 168
BLAST of NO12G00480 vs. NCBI_GenBank
Match: XP_008908625.1 (hypothetical protein PPTG_13909 [Phytophthora parasitica INRA-310] >ETI42575.1 hypothetical protein F443_12314 [Phytophthora parasitica P1569] >ETK82593.1 hypothetical protein L915_12034 [Phytophthora parasitica] >ETL35982.1 hypothetical protein L916_11959 [Phytophthora parasitica] >ETM42460.1 hypothetical protein L914_11870 [Phytophthora parasitica] >ETN06123.1 hypothetical protein PPTG_13909 [Phytophthora parasitica INRA-310] >ETO71244.1 hypothetical protein F444_12414 [Phytophthora parasitica P1976] >ETP12291.1 hypothetical protein F441_12298 [Phytophthora parasitica CJ01A1] >KUF84865.1 DNA-directed RNA polymerase I subunit RPA43 [Phytophthora nicotianae]) HSP 1 Score: 85.9 bits (211), Expect = 2.600e-13 Identity = 48/159 (30.19%), Postives = 92/159 (57.86%), Query Frame = 0 Query: 45 LALLPHAMEDMEQHVRSKLHTLLMKYNEDAGGVLLAIYHIRQPPARRFATILHDLPFLHVQVEAMALVFTPTPGSVVTGEVIKVTGTHVALLVYGLFNAAIAREDMPDAFEYVSGRGEWVCNGGEGRSEGRFALGEQVKFRVVRVHEAAGLLALDGSMR 204 ++L P D + L LM+Y+E GV+L+ +++ R + TI++++P++H +V ALVF P G ++ G V K+ HV +L G+FN ++A ++P + + + W+ G +G S ++ ++V+ +V+RVH A G++A++ +MR Sbjct: 15 VSLSPCHAVDARVGIEQDLTEQLMRYSEALQGVVLSFSNVQL--GRPYGTIVNEMPYIHCKVLTDALVFRPKEGMMLRGVVNKIGSNHVGMLFAGVFNGSVAEAELPKGYVHNYAQDCWL--GEDGSS---ISVEDEVEVKVLRVHVAGGMIAIEATMR 166
BLAST of NO12G00480 vs. NCBI_GenBank
Match: ETP40419.1 (hypothetical protein F442_12230 [Phytophthora parasitica P10297]) HSP 1 Score: 85.9 bits (211), Expect = 2.600e-13 Identity = 48/159 (30.19%), Postives = 92/159 (57.86%), Query Frame = 0 Query: 45 LALLPHAMEDMEQHVRSKLHTLLMKYNEDAGGVLLAIYHIRQPPARRFATILHDLPFLHVQVEAMALVFTPTPGSVVTGEVIKVTGTHVALLVYGLFNAAIAREDMPDAFEYVSGRGEWVCNGGEGRSEGRFALGEQVKFRVVRVHEAAGLLALDGSMR 204 ++L P D + L LM+Y+E GV+L+ +++ R + TI++++P++H +V ALVF P G ++ G V K+ HV +L G+FN ++A ++P + + + W+ G +G S ++ ++V+ +V+RVH A G++A++ +MR Sbjct: 15 VSLSPCHAVDARVGIEQDLTEQLMRYSEALQGVVLSFSNVQL--GRPYGTIVNEMPYIHCKVLTDALVFRPKEGMMLRGVVNKIGSNHVGMLFAGVFNGSVAEAELPKGYVHNYAQDCWL--GEDGSS---ISVEDEVEVKVLRVHVAGGMIAIEATMR 166
BLAST of NO12G00480 vs. NCBI_GenBank
Match: XP_009493906.1 (hypothetical protein H696_01723 [Fonticula alba] >KCV72328.1 hypothetical protein H696_01723 [Fonticula alba]) HSP 1 Score: 85.5 bits (210), Expect = 3.400e-13 Identity = 55/167 (32.93%), Postives = 88/167 (52.69%), Query Frame = 0 Query: 47 LLPHAMEDMEQHVRSKLHTLLMKYNEDAGGVLLAIYHIR------QPPARR----FATILHDLPFLHVQVEAMALVFTPTPGSVVTGEVIKVTGTHVALLVYGLFNAAIAREDMPDAFEYVSGRGEWVCNGGEGRSEGRFALGEQVKFRVVRVHEAAGLLALDGSMR 204 LLP M D + + +L+ +L+ +++ GG +L+ ++ +P + I++D PF+HV V A LVF P GS + G VIK+ V +LV GLFNA+I E++ F Y G + + SE A+G ++ F V R+ G+LA+ GS+R Sbjct: 28 LLPADMGDPRRGIDQRLNAMLLHHSQHIGGTVLSYSDVQFLDDAGKPASSTKNIVSGRIINDAPFIHVTVRAKFLVFKPKVGSQLVGSVIKIGPDQVGMLVLGLFNASIPTENLGSEFAYDYSEGVY-RKASKSGSEVAIAVGTRLAFSVQRLDTVNGILAMTGSLR 193
BLAST of NO12G00480 vs. NCBI_GenBank
Match: XP_002505653.1 (predicted protein [Micromonas commoda] >ACO66911.1 predicted protein [Micromonas commoda]) HSP 1 Score: 84.7 bits (208), Expect = 5.800e-13 Identity = 59/169 (34.91%), Postives = 86/169 (50.89%), Query Frame = 0 Query: 42 IFKLALLPHAMEDMEQHVRSKLHTLLMKYNEDAGGVLLAIYHIRQPPARRFATILHDLPFLHVQVEAMALVFTPTPGSVVTGEVIKVTGTHVALLVYGLFNAAIAREDMPDAFEY----VSGRGEWVCNGGEGRSEGRFALGEQVKFRVVRVHEAAGLLALDGSMREKG 207 +FKL + P AM D + L +LM+++ GGVL++ R + A I+H + V V A VF P PG + G V KV V +LV G+FNA+++ D+ D F + S G W E E R A+G++V F V V E +L L GS++E+G Sbjct: 26 VFKLGIHPSAMHDALGGAKELLDGMLMRHHHQLGGVLVSYADARLVGSD--ARIIHQAGYCDVHVRCTARVFCPKPGRKLLGVVNKVGADFVGMLVMGVFNASVSAADISDEFIHNPIDASPGGCW--ESAEDNGEHRIAVGDEVVFVVKAVSEHDDVLHLLGSLKEEG 190
BLAST of NO12G00480 vs. NCBI_GenBank
Match: XP_013903944.1 (hypothetical protein MNEG_3029 [Monoraphidium neglectum] >KIZ04925.1 hypothetical protein MNEG_3029 [Monoraphidium neglectum]) HSP 1 Score: 84.7 bits (208), Expect = 5.800e-13 Identity = 60/164 (36.59%), Postives = 86/164 (52.44%), Query Frame = 0 Query: 43 FKLALLPHAMEDMEQHVRSKLHTLLMKYNEDAGGVLLAIYHIRQPPARRFATILHDLPFLHVQVEAMALVFTPTPGSVVTGEVIKVTGTHVALLVYGLFNAAIAREDMPDAFEYVSGRGEWVCNGGEGRSEGRFALGEQVKFRVVRVHEAAGLLALDGSMREKG 207 F L L P +D+ + VR +L+ L++Y+ED GGV+LA + + R A + PFL V V A +F P PG + G VIKV +V LLV G+FNAAI E + F+ G WV + R +G V+F V V + A L ++ GS+ + G Sbjct: 26 FTLHLHPSKTQDVIEGVREQLNLGLLRYSEDLGGVVLA--YSNERVTGRMARLHPYFPFLAVAVVARVTLFCPRPGQHLVGRVIKVGTDYVGLLVLGVFNAAIGAERIRREFKCSPEAGCWV---SLRDATHRILVGSYVRFVVDSVLDHASLFSIVGSLLDAG 184
BLAST of NO12G00480 vs. NCBI_GenBank
Match: GAX82592.1 (hypothetical protein CEUSTIGMA_g10018.t1 [Chlamydomonas eustigma]) HSP 1 Score: 84.0 bits (206), Expect = 9.900e-13 Identity = 48/165 (29.09%), Postives = 88/165 (53.33%), Query Frame = 0 Query: 42 IFKLALLPHAMEDMEQHVRSKLHTLLMKYNEDAGGVLLAIYHIRQPPARRFATILHD-LPFLHVQVEAMALVFTPTPGSVVTGEVIKVTGTHVALLVYGLFNAAIAREDMPDAFEYVSGRGEWVCNGGEGRSEGRFALGEQVKFRVVRVHEAAGLLALDGSMREK 206 +F + L P + ++E+ V L+ LL ++ ED G ++A + ++ T +H P +H++V A L+F P G ++ G+VIK+ V LLV G+FNA+IA + + F+ V G W + + +G +V+F+V ++ + + + GSM +K Sbjct: 12 VFNVELHPCKLHNVEEGVSEHLNALLFRFQEDLNGFVIAYKDLNIRKTKQ--TFIHPYFPLVHLEVRAKVLLFKPAEGCMLVGKVIKIAADFVGLLVLGVFNASIAADSIRSEFKCVD--GSWT---SKKDKDHVIEVGSEVRFKVTKLQDQSAFFGIFGSMMDK 169
BLAST of NO12G00480 vs. NCBI_GenBank
Match: ETL89201.1 (hypothetical protein L917_11802 [Phytophthora parasitica]) HSP 1 Score: 83.6 bits (205), Expect = 1.300e-12 Identity = 48/159 (30.19%), Postives = 91/159 (57.23%), Query Frame = 0 Query: 45 LALLPHAMEDMEQHVRSKLHTLLMKYNEDAGGVLLAIYHIRQPPARRFATILHDLPFLHVQVEAMALVFTPTPGSVVTGEVIKVTGTHVALLVYGLFNAAIAREDMPDAFEYVSGRGEWVCNGGEGRSEGRFALGEQVKFRVVRVHEAAGLLALDGSMR 204 ++L P D + L LM+Y+E GV+L+ +++ R TI++++P++H +V ALVF P G ++ G V K+ HV +L G+FN ++A ++P + + + W+ G +G S ++ ++V+ +V+RVH A G++A++ +MR Sbjct: 15 VSLSPCHAVDARVGIEQDLTEQLMRYSEALQGVVLSFSNVQL--GRPNGTIVNEMPYIHCKVLTDALVFRPKEGMMLRGVVNKIGSNHVGMLFAGVFNGSVAEAELPKGYVHNYAQDCWL--GEDGSS---ISVEDEVEVKVLRVHVAGGMIAIEATMR 166 The following BLAST results are available for this feature:
BLAST of NO12G00480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00480 ID=NO12G00480|Name=NO12G00480|organism=Nannochloropsis oceanica|type=gene|length=996bpback to top protein sequence of NO12G00480.1 >NO12G00480.1-protein ID=NO12G00480.1-protein|Name=NO12G00480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=332bpback to top Synonyms
Publications
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