NO12G00310, NO12G00310 (gene) Nannochloropsis oceanica

Overview
NameNO12G00310
Unique NameNO12G00310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4030
Alignment locationchr12:107704..111733 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:107704..111733 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO12G00310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR066ncniR066Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G00310.1NO12G00310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G00310.1NO12G00310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G00310 ID=NO12G00310|Name=NO12G00310|organism=Nannochloropsis oceanica|type=gene|length=4030bp
TGATGCTATCGGTTACAATCGCTGACTGTCCCACCAAGGAAAGAATGTGC
CTAAAACTTGCAGAAAGTCTTTGCTCGTCTTGATAATTTCAGGCCACGCG
CCTTTGCGAAGTAACCATAATAGGTTATGTCTATCTAAGCTGCCTCTACT
TGCGAGCGTGTGCGTCTTGTGTCTGATTCTCACCGCTCAGTTCCTTCCCT
CACCCACGCACCCAGGCGTGAAAAATGAGCGACATCCATCCCCCCGCCTC
TGCCGGAGCAGGGGCCGACCATGCGAAGGGGGAACGCTGCACGCACCAAT
TGGTGTCTTCTTTCTTTCTGCCGTCGTCGGCGGGCCTTGGGGGTGAACGA
GAAGAAGATGCAGAGTACTCAAACAGCAGTAAGAGTTCGTGGGGAAGAGG
GAAAGACAGGGGGACGGAGGGGCTGCTAACGAAAGGGAAGCGCAGCCACG
ATGAGAAGCAAGAGAGAGAAGGAAAAAAAGAGCTCGCGACTGCTCGACAG
CTTAAGCCCGGGTCTGCAACTGCACCGGCGAAGAAGATGACAACAAGCCA
TACTCTCAGTGAGTGTCCTGCCCATGCCAGCAGCACCAGCAACACCAGCA
CCAGCAGCACCAGCACCAGCAGCCATGGCAGTCCCGTACCCATCTCTCGC
TCTCCTCATCGCAAGAAAGAGAAACGAGGCCACGACAAAGACGACCATCA
CCACGAAACACTGCACCAGCTGCAGCAGCAGCAAGAGCAAGACAAGGAAC
AGAGAGTGGGGGAAGAGGGAGAGGAGATCGAGAGGAATGTGAAGGGGGGC
TTCCAGGTGATGCAGGGGGAAGAAAGAGCACGGAAAAAGAGGAAGCGCCA
ACGTCATGTCTATCCAGCCTATTTCTCCTCCGCCCCATTCCTCACCCCCG
CCCTGCAAGATCTGCTGATCGGCCTCTTCCGTGACGACACGCTCATCTCC
CCCGCCACCAATCACCACTACTTCTGGTGCTTCCGTTCCTTCTGGGAACG
CTTCTACAGAGCCCTTCCTCCCTCCCTCCCTCATTTTCGCCCTCTCTCAA
CACCGCAGGCGCTTGGAAAGTGGTTGATGACGTTGCCGGTCCAGTCAACC
TTCCTAAGGGTGAGGCAGGAAGGGATGGAGGGGGGCCTGTCGAAAATGGG
CCAGCGGGCAGTTGCGATCGTATTGGCGGCTCTAGGATTGAAGCTGACGC
CCGGAGGTTTCGGTAAGAGGAGAGAACTGATATGGATGAAGGACGGAGGG
AAGAAGGCCAAGGTCAAGGGGGGGTTTGGAGGAGGAGGGAAGACGGGCGA
GATGAACACGGAGGAAGCGAGGGAAATGCAACAAGAAGAAGGGGATGGGG
AGGAGGAGGAGGAAAAGGAGGACAACTTCCATCCATACCACCACCAGCGC
CACCAGCATCGAATCAATTGCCAGCATCAGGTTTCGGAACGACCGCTACA
GCAGGTGCAGCAGCAATGCTATCCACAACTTGAGCACCAGCATCAACTAT
CGTATCTACAGCAGCCTCTCTTTTACCACCATCACGAACAACAACAACAA
CAACAACAACAACATCAACAGCAGCAGCAGCAGTACTACTATGCACAACT
ACAGCACCAACATCAACTTTCATACCTACAGCATCAGCCGCATCAGCAGC
ATCAGCGGCAGCAGTGGCGGTCCACGAAGATGAGTGAGGGGGAAAAGCAA
CACGCCGAGCTCCTCCGCCTCTTCCATGACCTGCCCTATCTCTCTCACCC
CCTCCAGAATTGGCTGATCAATTCCTTCATACACAATCAAGCGCCTAAAG
CCACCTATATCTATATCCCGCTTCTTCGTCGTGTCCTGCTGGACCTTCGG
CCATGCTTCGCTTCCTTCCCCCCTGCCTCTTCCCCTGCTTCCTTGCAAGC
GGCTTTTCTCCTTCCTGAGACTCAGAGGGCGCTGCTTGCCTGCCACCATG
AGCAGGAGGACATGGGGACAGAGATGAATGACTGGGCTTCGAGACATGCA
GGGACTGCACTGAAGCACCTCCTCTCCATTCTGAGGCTTAAGCCCGTAGA
CACCGCGGGAGGCATGGAGCTGGTGGTGGTGGAGGGGGAGAGAGGAAGAG
GTCCGGAACCGTGGGAGGGGTGGGATGACAAGGGGGGGCAGAGCCAGGAG
CAGGGGGAAGAGGTGGAAATGGTGGAGGAGGGTGAGACGGATAAGATGGC
GCCTAGGCCTAGGAAGGGACCGCGCCCATTCGTTTATCCCTCTCGTCTCC
CCTACGCCCCCTCCATCTCCCCCGCCCTCCAGGACTGGCTTATCGGCCGC
TTTCGCGACAACCGAGTCTCCTGCCGTGACACCAATCAGCAATCCTTCAA
AGCCTTCAAGCTCTTCTGGGAGCATTTCGAGCGCGCCCTTCCTCCCTCCC
TCCTCCGCACCTCCCCGTTCTCCACCCACCAGGCCCTCAGCGAGTGGCTG
CTAGAGCCACAAGTGCAGGCAACGATTTTGCAGGTGCGGGAGGCAAAGAG
GAAGGAAGGGAGAGGTGGAGGGGGGACCTTGATGTGGAGGAAGGGCGTGA
ACGTGGTTTTAGCCGGGCTAGGGCTGAGACTGACGGAGTTGCGGGAGAAG
GTGGGGAGGAGGCTCGTGCGCGCATACCCGGAAGAGCCGGCAGTGGTGGC
GCAGGAGGAAGCGATAACGAAATAAATTAAGATGAAAGAACCTACGGGCT
TGGGGTTGAAACTGTCGCTGCCTTCGGAAGGTGAGCCAAGACTCGTAGTG
CTGCCGGCAAAGACACAGAAAGGAGAAAGAGGAGTGGCGGAAGCTGGATC
GAGAGCTTGAGCGAGCACTAAAACAAGAAGAACAACAACCACCACAGCAG
CTGAACCTCCACTACCACCAGCACTTATCTTCGCAGAGCTATCAGCAGCC
TTACCAGAAGCAACCGCAGCCCAAGTTTTCTTCTGTAGCGCCCTCTTACA
ACCATTCTCCGCATCAATCCTCTGTTAATGGGAGCAGCGCCGAACTCAGT
GGCCTGACTAACCTGACATATGGCGCCACCGCCTTCGTTCCTGCCACTAC
CACACCCTAAACCCTCAAAGCCCAACCCGATACCAGCACTTTCACCAACA
CCAACACCATGAGTACCGCCACCATTCCCAGAAGCAGCAGCAGCTGCCGC
CGGTTGGATACGTCACTTATCCCCCGTACGCTGGCGCTCCCCTTTGGTAC
TACTTGCCGCATGTGCCTAACATAAGTGTCCCTAGAGGATGTGGGGCCGA
GGGCCCGAGCAACCCGCCTACTCCGCCTCCTCCTCCCTCTGTGCCTCCAG
CCAGCCATTACCCGCCGCAGTACATGTCGTACCCTCCGTGTGACCAAAGC
GAGCAAATCGTGATATTCATGATGTCGATCACAGGGCCTCGGACGTGTGG
TGGCAGTGAGAAAAGGGAGGGCAACATGAAGACTCTCTCTGCCTCGTATC
GTAAAGACGAGGCGAGAGGAGACGCAGGGAGCGCCGCCGCAGAAACGTTA
AGAAGACCAAGTACGGCAACGGATAGGTCACGTCCTGCATGGCATTGGCA
GCCATAGCACCTAAGAGGGCAACCACAACTGTGACAATTACAACGTAGAG
AGAAAAAATGCACACAAGAAGGCGGGGAAGAATTGCTTTTGACATTTTGG
TGAGAAAATCGAGCAGATAATCGAGGATGATTTGTTGATTGAACATTGGT
TTTATTTTTGGTTTATACGTGGTTTTGGGAGCATTTTTTTTCAAATTTTC
TCTTCACGCTGAGAAATCAACGGAATGATTCCGCTGATTTCCCGGAAACC
AAAAAAACGAACAAGGTATATACCGCAGCCCAATGTACTGTGTGAAGGGT
GGGGAGAGTAATATGAGAACGCCAGGAGAGTAGTTCAATTCATAAGCGCC
TGTCCTTGCGCCCACACCTTTTCTCCTAAAATTCGTCGCTCAATGGTCAG
AAATAAGCCTAGCGTTTCCTCGTCCCAAAGCTTGAAAGATATACTCACAT
GCTGATTTTTCATTTGAAAGCAAACAAATC
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protein sequence of NO12G00310.1

>NO12G00310.1-protein ID=NO12G00310.1-protein|Name=NO12G00310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=817bp
MSDIHPPASAGAGADHAKGERCTHQLVSSFFLPSSAGLGGEREEDAEYSN
SSKSSWGRGKDRGTEGLLTKGKRSHDEKQEREGKKELATARQLKPGSATA
PAKKMTTSHTLSECPAHASSTSNTSTSSTSTSSHGSPVPISRSPHRKKEK
RGHDKDDHHHETLHQLQQQQEQDKEQRVGEEGEEIERNVKGGFQVMQGEE
RARKKRKRQRHVYPAYFSSAPFLTPALQDLLIGLFRDDTLISPATNHHYF
WCFRSFWERFYRALPPSLPHFRPLSTPQALGKWLMTLPVQSTFLRVRQEG
MEGGLSKMGQRAVAIVLAALGLKLTPGGFGKRRELIWMKDGGKKAKVKGG
FGGGGKTGEMNTEEAREMQQEEGDGEEEEEKEDNFHPYHHQRHQHRINCQ
HQVSERPLQQVQQQCYPQLEHQHQLSYLQQPLFYHHHEQQQQQQQQHQQQ
QQQYYYAQLQHQHQLSYLQHQPHQQHQRQQWRSTKMSEGEKQHAELLRLF
HDLPYLSHPLQNWLINSFIHNQAPKATYIYIPLLRRVLLDLRPCFASFPP
ASSPASLQAAFLLPETQRALLACHHEQEDMGTEMNDWASRHAGTALKHLL
SILRLKPVDTAGGMELVVVEGERGRGPEPWEGWDDKGGQSQEQGEEVEMV
EEGETDKMAPRPRKGPRPFVYPSRLPYAPSISPALQDWLIGRFRDNRVSC
RDTNQQSFKAFKLFWEHFERALPPSLLRTSPFSTHQALSEWLLEPQVQAT
ILQVREAKRKEGRGGGGTLMWRKGVNVVLAGLGLRLTELREKVGRRLVRA
YPEEPAVVAQEEAITK*
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Synonyms
Publications