NO12G00250, NO12G00250 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G00250
Unique Name	NO12G00250
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	5089
Alignment location	chr12:79590..84678 -

Link to JBrowse

Properties


Property Name	Value
Description	Endo-b--glucanase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:79590..84678 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016787	hydrolase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process
GO:0008152	metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR008928	6-hairpin_glycosidase-like
IPR001701	Glyco_hydro_9

Homology

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BLAST of NO12G00250 vs. NCBI_GenBank
Match: EWM25871.1 (endo-beta- -glucanase [Nannochloropsis gaditana])

HSP 1 Score: 374.0 bits (959), Expect = 1.100e-99
Identity = 204/449 (45.43%), Postives = 277/449 (61.69%), Query Frame = 0

Query:  298 ERYNLAEVLQLSSLFYEAQRSGQLPESQRIKWRGDSCLKDGQDVGKDLTGGYFDAGDHIQFTLTMAYSMTVLIWGLIRYEDAYTAAGELQHMRQTVKWGLDSLVKSHTDENEFYVQISD-EVDHCRWGPPETINYLRRSYKVTCANPGSQPVMNAASALAAGSIAFKTCDPSYSAMLLRHAEGLFAFAERCPGDWIKDGRIPAANFYDDGGRYLDEHAFAAAWLHKATGQQHYLDKALSYYYRCCYVKGGQSDYISVLDWADMTMGVNLLLYEALRWGDFKDAIIHR--------HKAFIEKVYRTPKGLSYYNDWGANRYAANAAFTSLVAAELGFEVDGFRTYAASQIHYMLGDCCGGEKSFLIGFGPSWPPSYHHRAASCKGDDCRCTIQALPHVLWGALLGGPERDDTIVQDGCPDFMHMEVALDFNAGFTSAVAAMKHLSLQGI 738
            E+YN  +V+ LS+LFYEAQR+G+LP   RI WR DS + DG D   +L+GGY+DAGD++ F   +A S TVLIWGL+ YEDAYT AGEL HM  TVKW LD L+K+H   +  YVQ+ D +V+H  WG PE  +  R +  V  + PG++P+ +AA+A+AAG +AF+  DP Y+  LL HA+ LF  A   P  +       ++ +Y+  G Y DE A+AAAWLHKATG   YL +AL+           +SD +    W     GV LLLY+  R  D K A +            +    + RTP+GL+YY  WG  R+AAN AF +L+AA++G     +R +A SQIHYMLGD   G  S+++GFG ++P + HHRAASC    C C      + L+GAL+GGP+  D  + D C D+ H EV++D+NAGF  AVA +KHLSL G+
Sbjct:   67 EKYNYNQVIYLSNLFYEAQRAGKLPSDNRIPWRRDSNIADGFDSDVELSGGYYDAGDYLIFGWPLASSTTVLIWGLLEYEDAYTEAGELGHMLATVKWPLDWLLKAHVGPDALYVQVGDGKVEHRYWGRPEFESKPRPALLVNASVPGTEPLADAAAAMAAGFLAFQHRDPVYAHTLLLHAQQLFEAAMAHPRKFTL-----SSPYYESSG-YRDELAWAAAWLHKATGCASYLSQALNLAEIF-----NKSDNMGAFGWDSKDAGVYLLLYQLTR--DTKHAKVFASYLADWLPQASSATAIKRTPRGLTYYLTWGPLRWAANTAFLALLAADMGLSPGPYRAFARSQIHYMLGD--NGNFSYVVGFGSTFPKAIHHRAASCGRYGCICDTTPSANTLYGALVGGPDEKDMYLDD-CRDYKHTEVSVDYNAGFQGAVAGLKHLSLMGL 499

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BLAST of NO12G00250 vs. NCBI_GenBank
Match: XP_022097093.1 (uncharacterized protein LOC110982761 [Acanthaster planci])

HSP 1 Score: 370.5 bits (950), Expect = 1.200e-98
Identity = 251/622 (40.35%), Postives = 340/622 (54.66%), Query Frame = 0

Query:  177 GFFFGRLFKDFEHPIYGGWTLEVHFNKPVFELQSFNARIVGSGDGAKTYFLQPMYWNRDIPKG---NRRILVHGLTTPVVEDR--------IPLTATGALWYSPS-----------EPSAPXXXXXXXXXXXXXXXXXXXXXXER------------------------------YNLAEVLQLSSLFYEAQRSGQLPESQRIKWRGDSCLKDGQDVGKDLTGGYFDAGDHIQFTLTMAYSMTVLIWGLIRYEDAYTAAGELQHMRQTVKWGLDSLVKSHTDENEFYVQISD-EVDHCRWGPPETINYLRRSYKVTCANPGSQPVMNAASALAAGSIAFKTCDPSYSAMLLRHAEGLFAFAERCPGDWIKDGRIPAANFYDDGGRYLDEHAFAAAWLHKATGQQHYLDKALSYYYRCCYVKGGQSDYISVLDWADMTMGVNLLLYEALRWGDFKDAIIHRHKAFIE-KVYRTPKGLSYYNDWGANRYAANAAFTSLVAAELGFEVDGFRTYAASQIHYMLGDCCGGEKSFLIGFGPSWPPSYHHRAASCKGDDCRCTIQAL------PHVLWGALLGGPERDDTIVQDGCPDFMHMEVALDFNAGFTSAVAAMKHLSLQGIH 739
            G F G +     + + GGW +E+ F++PV  LQ + A ++   DG KTY ++   +N D   G     +       TP    R        I  T TGA   S +           EPS  XXXXXXXXXXXXXXXXXXXXXX                                Y+ AEV+  S LFYEAQRSG LP + RI WR DS + D    G+DLTGG+FDAGDH++F   MA ++TVL WGL+ Y DAY  +GEL +M   +KW  D  +K HT   EFY Q+ D  +DH  WG PE +   R ++K+T ANPG++     A+ALAA SIAF+  DP+Y+  LL+HA  L+ FA R  G +  D    AA+FYD    Y DE A++AAWL +ATG   Y+  A ++Y    +  G  + +     W D   GV +L+Y+      ++ AI     ++    ++ TPKGL++ + WG NRYAAN AF +LVAA  G +   +  +A  QI+YMLGD     +S+++GFG + P S HHRA+SC      C    L      P VL GAL+GGP+++D  V +   DF+  EVA D+NAGF SAVA +K L + G++
Sbjct:  302 GNFKGEIVIPIRNEVSGGWLVELKFSEPVLNLQVYRANVLSILDGGKTYLIKNKDYNADQLVGAVLREQFQASASNTPSFTARMIGQPDCSITPTPTGATEVSTTISKAHTTETRIEPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPALPTTAKATTTGVPLTPSSAPYDYAEVIHKSILFYEAQRSGPLPANNRIPWRADSTVNDRGLNGEDLTGGWFDAGDHVKFGFPMASTVTVLAWGLVEYRDAYIGSGELVNMLDCIKWATDYFLKCHTGMYEFYAQVGDGHLDHAYWGRPEDMTINRPAFKITAANPGTEIAGETAAALAASSIAFRETDPAYADELLQHARELYDFANRWRGKY-TDAIPNAASFYDSHSGYGDELAWSAAWLARATGDSSYVTAATAHY--DTFNIGSGTPW--AFSWDDKKAGVMMLMYQLTGASRYQTAITDFLDSWQPGNIHYTPKGLAWRDQWGTNRYAANTAFLALVAAREGIDATKYSDFAKQQINYMLGD---AGRSYVVGFGNNPPHSPHHRASSCPDMPAPCDWGNLDGSDPNPQVLEGALVGGPDQNDGFVNNR-RDFVQNEVATDYNAGFQSAVAGLKSLVINGLY 914

[Close]

BLAST of NO12G00250 vs. NCBI_GenBank
Match: EWM25995.1 (endo-beta- -glucanase, partial [Nannochloropsis gaditana])

HSP 1 Score: 369.0 bits (946), Expect = 3.400e-98
Identity = 164/216 (75.93%), Postives = 191/216 (88.43%), Query Frame = 0

Query:  522 KATGQQHYLDKALSYYYRCCYVKGGQSDYISVLDWADMTMGVNLLLYEALRWGDFKDAIIHRHKAFIEKVYRTPKGLSYYNDWGANRYAANAAFTSLVAAELGFEVDGFRTYAASQIHYMLGDCCGGEKSFLIGFGPSWPPSYHHRAASCKGDDCRCTIQALPHVLWGALLGGPERDDTIVQDGCPDFMHMEVALDFNAGFTSAVAAMKHLSLQGI 738
            +ATG++ YLDKA++ +Y+CCYV GG    +SVLDWADMTMG+NLLLYEA +W DFKDA+I+R KAF+ K+ RTPKGLSYYN+WG NRYAANAAFT+LVAAE GFEVD FR+YAASQI+YMLGDCC G+KSFLIGFGPSWP SYHHRAASCKG DCRCT Q  PH+LWG LLGGPE+DDTI  +GCPDF+HMEVALDF+AGFT+AVA +KHLSL+GI
Sbjct:  181 QATGKKEYLDKAIATFYQCCYVPGGYQ--VSVLDWADMTMGINLLLYEATQWNDFKDAVINRQKAFMNKIPRTPKGLSYYNEWGPNRYAANAAFTALVAAEFGFEVDYFRSYAASQINYMLGDCCDGKKSFLIGFGPSWPNSYHHRAASCKGTDCRCTQQDFPHILWGGLLGGPEKDDTISDEGCPDFIHMEVALDFSAGFTTAVAGLKHLSLRGI 394

[Close]

BLAST of NO12G00250 vs. NCBI_GenBank
Match: XP_013419079.1 (uncharacterized protein LOC106179839 [Lingula anatina])

HSP 1 Score: 366.3 bits (939), Expect = 2.200e-97
Identity = 217/560 (38.75%), Postives = 301/560 (53.75%), Query Frame = 0

Query:  192 YGGWTLEVHFNKPVFELQSFNARIVGSGDGAKTYFLQPMYWNRDIPKGNRRIL-------VHGLTTPVVEDRIPLTATGALWYSPSEPSAPXXXXXXXXXXXXXXXXXXXXXXERYNLAEVLQLSSLFYEAQRSGQLPESQRIKWRGDSCLKDGQDVGKDLTGGYFDAGDHIQFTLTMAYSMTVLIWGLIRYEDAYTAAGELQHMRQTVKWGLDSLVKSHTDENEFYVQISD-EVDHCRWGPPETINYLRRSYKVTCANPGSQPVMNAASALAAGSIAFKTCDPSYSAMLLRHAEGLFAFAERCPGDWIKDGRIPAANFYDDGGRYLDEHAFAAAWLHKATGQQHYLDKALSYYYRCCYVKGGQSDYISVLDWADMTMGVNLLLYEALRWGDFKDAIIHRHKAFIE--KVYRTPKGLSYYNDWGANRYAANAAFTSLVAAELGFEVDGFRTYAASQIHYMLGDCCGGEKSFLIGFGPSWPPSYHHRAASCKGDDCRCTIQAL------PHVLWGALLGGPERDDTIVQDGCPDFMHMEVALDFNAGFTSAVAAMKHLSLQ 736
            + GW + + F++P+++L+ ++A I+ S  G K + L+    N     G    +           T  +V      T TG    +PS+P                          +YN  +VL  S LFYEAQRSG+LP + R+ WRGDS L D    G+DLTGG++DAGDH++F L M +S   L WGL+ Y+DAY AAGE  +M  +VKW LD  +K+HT +NE YVQ+ D   DH  WG PE +N  R ++KVT  NPGS  V   A A+AAG +AFK  +  Y+A LLRHA+ L+ F  R  G +   G IPA  FY     Y D+   AAAWL++AT +  YL+ A  +          ++       W D  +   LLLY A +   +K  I    ++++    V  TPKGL++   WG+ RYAAN AF +L AA+ G   + ++ +A  QIHYMLGD     +S+++GFG + P   HHRAASC      C           P VL GAL+GGP  +D    D   D++  EVA D+NAGF SA+A +KH +LQ
Sbjct:   41 HNGWEMVLTFDRPLWKLEIWDADIIRSEQGGKVWHLKNKGHNAMKNPGESIAMTFVARGGASSATVRIVGQDGGGTNTGT---NPSKP-------------VVDPVKPVTPTNTKYNYDDVLHKSILFYEAQRSGKLPSNNRVPWRGDSALGDRGRNGEDLTGGWYDAGDHVKFGLPMGWSTMTLTWGLVDYKDAYVAAGEYNNMLSSVKWPLDYFIKAHTSKNELYVQVGDGYADHGFWGRPEDMNMNRPAFKVTSGNPGSDVVGQTAGAMAAGYMAFKDSNAGYAATLLRHAKELYDFGSRSQGIYTNQGGIPAKPFYVSQS-YKDDLCVAAAWLYRATKEAKYLNDAKRW---------AETSPSWAYSWDDNKVSCQLLLYIATKDNTYKSPIESYMRSWMRGGDVTYTPKGLAWRLQWGSLRYAANTAFIALRAADAGINTNTYKNWAQGQIHYMLGDT---GRSYVVGFGNNPPTQPHHRAASCPMRPAPCGSAQQNAWGPNPQVLNGALVGGPGSNDEYT-DSRNDYIKNEVATDYNAGFQSAIAGLKHWALQ 570

[Close]

BLAST of NO12G00250 vs. NCBI_GenBank
Match: XP_020614867.1 (uncharacterized protein LOC110053019 [Orbicella faveolata])

HSP 1 Score: 365.2 bits (936), Expect = 4.900e-97
Identity = 198/447 (44.30%), Postives = 268/447 (59.96%), Query Frame = 0

Query:  299 RYNLAEVLQLSSLFYEAQRSGQLPESQRIKWRGDSCLKDGQDVGKDLTGGYFDAGDHIQFTLTMAYSMTVLIWGLIRYEDAYTAAGELQHMRQTVKWGLDSLVKSHTDENEFYVQISD-EVDHCRWGPPETINYLRRSYKVTCANPGSQPVMNAASALAAGSIAFKTCDPSYSAMLLRHAEGLFAFAERCPGDWIKDGRIPAANFYDDGGRYLDEHAFAAAWLHKATGQQHYLDKALSYYYRCCYVKGGQSDYISVLDWADMTMGVNLLLYEALRWGDFKDAIIHRHKAFI--EKVYRTPKGLSYYNDWGANRYAANAAFTSLVAAELGFEVDGFRTYAASQIHYMLGDCCGGEKSFLIGFGPSWPPSYHHRAASCKGDDCRC------TIQALPHVLWGALLGGPERDDTIVQDGCPDFMHMEVALDFNAGFTSAVAAMKHLSLQG 737
            +Y+   VL  S LFYEAQRSG+LP S R+ WR DS L D    G+DL+GG++DAGD+++F   MA+S+T+L WGL+ Y DAY  AGEL +M   +KW LD  +K+H  + EFY Q+ D   DH  WG PE +   R ++K+T   PGS      A+ALAA SIAF+  D SYS  LL+HA  L+ FA++  G +  D    AA+FY     Y DE  + AAWL+KAT  + YL KA  YY +      G +       W D   GV +LL E  +   +K A+     +++   +V+ TPKGL++ + WG NRY+AN AF +LVAA+ G +   FR +A  QIHYMLGD     +SF++GFG + P   HHR++SC      C      +  A P  L+GAL+GGP ++D    D   DF+  EVA D+NAGF SAVA +KHL+L G
Sbjct:  368 KYDYDSVLHDSILFYEAQRSGKLPISNRVPWRKDSALNDRGQNGEDLSGGWYDAGDYVKFGFPMAFSVTMLSWGLVEYRDAYVDAGELNYMLDCIKWPLDYFMKAHIKQEEFYGQVGDGHTDHAYWGRPEDMTMARPAWKITPQKPGSDLAAETAAALAAASIAFRFSDVSYSMKLLQHAADLYEFADKYRGVY-SDSIPNAASFYRSFSGYKDELVWGAAWLYKATKDKKYLTKAEQYYKQF-----GMNGKPWAFSWDDKKAGVQVLLAEITKKASYKQAVDTFITSWLPGHEVHYTPKGLAWRDQWGPNRYSANTAFLALVAADQGVKPSAFREFAKKQIHYMLGD---SGRSFVVGFGTNPPERPHHRSSSCPLSPVPCNWDNFNSPSANPQTLYGALVGGPGKNDEYTDDR-KDFIKNEVATDYNAGFQSAVAGLKHLALTG 804

[Close]

BLAST of NO12G00250 vs. NCBI_GenBank
Match: KXJ18436.1 (Endoglucanase A [Exaiptasia pallida])

HSP 1 Score: 364.8 bits (935), Expect = 6.500e-97
Identity = 200/444 (45.05%), Postives = 273/444 (61.49%), Query Frame = 0

Query:  304 EVLQLSSLFYEAQRSGQLPESQRIKWRGDSCLKDGQDVGKDLTGGYFDAGDHIQFTLTMAYSMTVLIWGLIRYEDAYTAAGELQHMRQTVKWGLDSLVKSHTDENEFYVQISD-EVDHCRWGPPETINYLRRSYKVTCANPGSQPVMNAASALAAGSIAFKTCDPSYSAMLLRHAEGLFAFAERCPGDWIKDGRIPAANFYDDGGRYLDEHAFAAAWLHKATGQQHYLDKALSYYYRCCYVKGGQSDYISVLDWADMTMGVNLLLYEALRWGDFKDAIIHRHKAFIEK------VYRTPKGLSYYNDWGANRYAANAAFTSLVAAELGFEVDGFRTYAASQIHYMLGDCCGGEKSFLIGFGPSWPPSYHHRAASCKGDDCRCTIQAL------PHVLWGALLGGPERDDTIVQDGCPDFMHMEVALDFNAGFTSAVAAMKHLSL 735
            +VL  S LFYEAQRSG+LP + RI WRGDS L D    G+DLTGG++DAGD ++F   MA S+TVL WG++ Y DAY AAGEL ++  ++KW  D  +K+HT + EFY Q+ D  VDH  WG PE +   R ++K+    PGS+     A+ALAA S+AF+  +PSY+  L++HAE L+ FA++  G +  D    AA+FY     Y DE  + AAWL++AT +  YL KA SYY +  +   G++   S   W D   G  LLL E     ++K+ I    K +++       V  TPKGL++ + WG NRY+AN AF +LVAA+ G + D +R +A  QIHYMLGD     +SF++GFG + P   HHR++SC      CT  AL      P VL GAL+GGP+ +D   +D   D++  EVA D+NAGF SAVA +K LSL
Sbjct:  427 QVLHDSILFYEAQRSGKLPSTNRIPWRGDSALNDKGQNGQDLTGGWYDAGDFVKFGFPMASSVTVLAWGVVEYRDAYKAAGELDNVLDSIKWATDYFIKAHTAKFEFYGQVGDGHVDHAYWGRPEEMTMKRPAFKIXTXKPGSELAAETAAALAATSMAFQQTNPSYANKLIKHAEELYEFADKYRGKY-SDSITNAASFYKSFSGYNDELVWGAAWLYRATNKAEYLSKAESYYQQ--FNMNGKAWTFS---WDDKKAGAQLLLAEITGKSNYKNDI----KGYLDSWLPGRDVKYTPKGLAWRDQWGPNRYSANTAFLALVAADNGLKPDIYRNFAKKQIHYMLGD---SGRSFVVGFGANPPKRPHHRSSSCPDRPAPCTHDALNAPGANPQVLXGALVGGPDVNDNF-KDDRKDYIENEVATDYNAGFQSAVAGLKXLSL 856

[Close]

BLAST of NO12G00250 vs. NCBI_GenBank
Match: XP_020893299.1 (uncharacterized protein LOC110232443 [Exaiptasia pallida])

HSP 1 Score: 364.8 bits (935), Expect = 6.500e-97
Identity = 200/444 (45.05%), Postives = 273/444 (61.49%), Query Frame = 0

Query:  304 EVLQLSSLFYEAQRSGQLPESQRIKWRGDSCLKDGQDVGKDLTGGYFDAGDHIQFTLTMAYSMTVLIWGLIRYEDAYTAAGELQHMRQTVKWGLDSLVKSHTDENEFYVQISD-EVDHCRWGPPETINYLRRSYKVTCANPGSQPVMNAASALAAGSIAFKTCDPSYSAMLLRHAEGLFAFAERCPGDWIKDGRIPAANFYDDGGRYLDEHAFAAAWLHKATGQQHYLDKALSYYYRCCYVKGGQSDYISVLDWADMTMGVNLLLYEALRWGDFKDAIIHRHKAFIEK------VYRTPKGLSYYNDWGANRYAANAAFTSLVAAELGFEVDGFRTYAASQIHYMLGDCCGGEKSFLIGFGPSWPPSYHHRAASCKGDDCRCTIQAL------PHVLWGALLGGPERDDTIVQDGCPDFMHMEVALDFNAGFTSAVAAMKHLSL 735
            +VL  S LFYEAQRSG+LP + RI WRGDS L D    G+DLTGG++DAGD ++F   MA S+TVL WG++ Y DAY AAGEL ++  ++KW  D  +K+HT + EFY Q+ D  VDH  WG PE +   R ++K+    PGS+     A+ALAA S+AF+  +PSY+  L++HAE L+ FA++  G +  D    AA+FY     Y DE  + AAWL++AT +  YL KA SYY +  +   G++   S   W D   G  LLL E     ++K+ I    K +++       V  TPKGL++ + WG NRY+AN AF +LVAA+ G + D +R +A  QIHYMLGD     +SF++GFG + P   HHR++SC      CT  AL      P VL GAL+GGP+ +D   +D   D++  EVA D+NAGF SAVA +K LSL
Sbjct:  402 QVLHDSILFYEAQRSGKLPSTNRIPWRGDSALNDKGQNGQDLTGGWYDAGDFVKFGFPMASSVTVLAWGVVEYRDAYKAAGELDNVLDSIKWATDYFIKAHTAKFEFYGQVGDGHVDHAYWGRPEEMTMKRPAFKIXTXKPGSELAAETAAALAATSMAFQQTNPSYANKLIKHAEELYEFADKYRGKY-SDSITNAASFYKSFSGYNDELVWGAAWLYRATNKAEYLSKAESYYQQ--FNMNGKAWTFS---WDDKKAGAQLLLAEITGKSNYKNDI----KGYLDSWLPGRDVKYTPKGLAWRDQWGPNRYSANTAFLALVAADNGLKPDIYRNFAKKQIHYMLGD---SGRSFVVGFGANPPKRPHHRSSSCPDRPAPCTHDALNAPGANPQVLXGALVGGPDVNDNF-KDDRKDYIENEVATDYNAGFQSAVAGLKXLSL 831

[Close]

BLAST of NO12G00250 vs. NCBI_GenBank
Match: XP_021363481.1 (uncharacterized protein LOC110456820 [Mizuhopecten yessoensis] >XP_021363482.1 uncharacterized protein LOC110456820 [Mizuhopecten yessoensis] >XP_021363483.1 uncharacterized protein LOC110456820 [Mizuhopecten yessoensis] >XP_021363484.1 uncharacterized protein LOC110456820 [Mizuhopecten yessoensis] >OWF45592.1 Endoglucanase E-4 [Mizuhopecten yessoensis])

HSP 1 Score: 363.2 bits (931), Expect = 1.900e-96
Identity = 217/573 (37.87%), Postives = 307/573 (53.58%), Query Frame = 0

Query:  176 GGFFFGRLFKDFEHPIYGGWTLEVHFNKPV-FELQSFNARIVGSGDGAKTYFLQPMYWNRDIPKGNRRILVHGLTTPVVEDRIPLTATGALWYSPSEP--SAPXXXXXXXXXXXXXXXXXXXXXXERYNLAEVLQLSSLFYEAQRSGQLPESQRIKWRGDSCLKDGQDVGKDLTGGYFDAGDHIQFTLTMAYSMTVLIWGLIRYEDAYTAAGELQHMRQTVKWGLDSLVKSHTDENEFYVQISD-EVDHCRWGPPETINYLRRSYKVTCANPGSQPVMNAASALAAGSIAFKTCDPSYSAMLLRHAEGLFAFAERCPGDWIKDGRIPAANFYDDGGRYLDEHAFAAAWLHKATGQQHYLDKALSYYYRCCYVKGGQSDYISVLDWADMTMGVNLLLYEALRWGDFKDAIIHRHKAFIE--KVYRTPKGLSYYNDWGANRYAANAAFTSLVAAELGFEVDGFRTYAASQIHYMLGDCCGGEKSFLIGFGPSWPPSYHHRAASCKGDDCRCTIQAL------PHVLWGALLGGPERDDTIVQDGCPDFMHMEVALDFNAGFTSAVAAMKHLSLQG 737
            G  F G      +  +Y GW ++VHFN PV   L      I  +    +T+ L               IL  G+        + +T TG    S S+P  +A                       E+YN AEVL+ S LFYEAQRSG+LP + RI WRGDS + D    G+DLTGG+FDAGDHI+F L +A S+++L WGL+ ++DAY  AG+L +M  +++W L+ ++K+HT  NE YVQ+ D ++DH  WG PE +   R +YK+T   PGS      A+A+AA  IAFK  DP ++A LLRHA  ++AFA +  G + K     A   Y     Y DE  +  AWL+ ATG++ +L  +  Y++       GQS       W +  +G  +LLY       +K  I      ++    +     GL++ + WG+ R+AAN AF +LVAAE G   D +R +A SQIH  LGD     +SF++GFG + P   HHRA+SC      C+ +AL      PH ++G L+GGP ++ + + D   D+   EVA D+NAGF SAVA +KHLSL G
Sbjct:   35 GTRFEGMFQFPIDEEVY-GWEIKVHFNYPVILHLGEHKTTIYSTSADKRTFVLV-------------NILSQGIMH--ANGTLSMTITGQYNRSTSDPPIAATATFVNLIHDEQVVASSPAAVASEKYNYAEVLEKSILFYEAQRSGKLPPTNRIPWRGDSAMNDRGQNGEDLTGGWFDAGDHIKFALPLASSVSMLAWGLVEFKDAYVGAGQLDNMYDSIRWPLEWMMKAHTGPNELYVQVGDVDLDHHFWGRPEDMKMARPAYKITAEKPGSDVAGEFAAAMAASYIAFKDKDPQFAADLLRHAREIYAFALQYNGTYSKSLPQSAGAAYGSSD-YDDEMCWGGAWLYLATGEEKFLTDSKKYHHP--GTSWGQS-------WGNKDIGCKVLLYNVTGEDKYKADITGTFTDWMPGGSLPYFKSGLAFRDQWGSLRHAANMAFVALVAAEHGINSDAYRAWAKSQIHIALGDT---GRSFVVGFGVNPPSHPHHRASSCPSMPAPCSFEALTRPESSPHTVYGGLVGGPSQEGSYIDDR-QDYKQNEVACDYNAGFQSAVAGLKHLSLTG 577

[Close]

BLAST of NO12G00250 vs. NCBI_GenBank
Match: EWM20555.1 (beta- -endoglucanase [Nannochloropsis gaditana])

HSP 1 Score: 359.0 bits (920), Expect = 3.500e-95
Identity = 207/450 (46.00%), Postives = 267/450 (59.33%), Query Frame = 0

Query:  298 ERYNLAEVLQLSSLFYEAQRSGQLPESQRIKWRGDSCLKDGQDVGKDLTGGYFDAGDHIQFTLTMAYSMTVLIWGLIRYEDAYTAAGELQHMRQTVKWGLDSLVKSHTDENEFYVQISD-EVDHCRWGPPETINYLRRSYKV-TCANPGSQPVMNAASALAAGSIAFK-TCDPSYSAMLLRHAEGLFAFAERCPGDWIKDGRIPAANFYDDGGRYLDEHAFAAAWLHKATGQQHYLDKALSYYY-RCCYVKGGQSDYISVLDWADMTMGVNLLLYEALRWGDFKDAIIHRHKAFIEKVYRTPKGLSYYNDWGANRYAANAAFTSLVAAELGFEVDGFRTYAASQIHYMLGDCCGGEK--------SFLIGFGPSWPPSYHHRAASC-KGDDCRCTIQALPHVLWGALLGGPERDDTIVQDGCPDFMHMEVALDFNAGFTSAVAAMKHLSL 735
            E+YN   V+ LS LFYEAQRSG LP S RI WRGDS L+DG+DV  DLTGG++DAGDH++F   MA+S T L WG+  Y DA+  AGEL +    +KW  D LVK H D + +YVQ+ +   DH  WG  E++   R SY V      GS  +  AA+ALAA S+ FK   D  Y+A L+  A+ LFA      GD  + G   +  FY   G + DE A+ AAWL++ATG+Q YLDKA S Y   CC   G    Y     W     GV LLLY+  R   +K    +     I K  +TPKGL+Y++ WG+NRYAAN AF +LVAA+ G  V+  R +A  QIHYMLGD  GG          S++ G+G  +P + HHR +SC  G +C C     PHVL+GAL+GGP  +D    D C D+   EV  D+NAGFT+A+ A++HLSL
Sbjct:   73 EKYNYGHVMGLSLLFYEAQRSGPLPASNRIPWRGDSALEDGKDVNLDLTGGWYDAGDHVKFNFPMAWSATTLAWGVHEYWDAWKKAGELSNALDQLKWVADYLVKCHPDPDTYYVQVGNGNSDHGYWGTAESMTMSRPSYAVGRGREAGSAAIGEAAAALAAISVLFKQQGDSVYAAHLIDTAKSLFAL-----GDGNQGGFSVSQPFYSSSG-FRDELAWGAAWLYEATGEQEYLDKAESLYAGGCC---GSAWSY----SWDAKAPGVQLLLYKHTRKSQYKTDSSNFVGGAIGK-GQTPKGLAYWDKWGSNRYAANGAFIALVAADYGIHVEDGRAWAMQQIHYMLGDAHGGINNATGLPFFSYVCGYGDDFPRAPHHRGSSCWSGTNCNCGSSPQPHVLYGALVGGPGNNDD-YSDSCSDYTRNEVTTDYNAGFTAALGALRHLSL 507

[Close]

BLAST of NO12G00250 vs. NCBI_GenBank
Match: XP_020893295.1 (uncharacterized protein LOC110232439 [Exaiptasia pallida] >KXJ18455.1 Endoglucanase A [Exaiptasia pallida])

HSP 1 Score: 358.6 bits (919), Expect = 4.600e-95
Identity = 193/444 (43.47%), Postives = 268/444 (60.36%), Query Frame = 0

Query:  300 YNLAEVLQLSSLFYEAQRSGQLPESQRIKWRGDSCLKDGQDVGKDLTGGYFDAGDHIQFTLTMAYSMTVLIWGLIRYEDAYTAAGELQHMRQTVKWGLDSLVKSHTDENEFYVQISD-EVDHCRWGPPETINYLRRSYKVTCANPGSQPVMNAASALAAGSIAFKTCDPSYSAMLLRHAEGLFAFAERCPGDWIKDGRIPAANFYDDGGRYLDEHAFAAAWLHKATGQQHYLDKALSYYYRCCYVKGGQSDYISVLDWADMTMGVNLLLYEALRWGDFKDAIIHRHKAFI--EKVYRTPKGLSYYNDWGANRYAANAAFTSLVAAELGFEVDGFRTYAASQIHYMLGDCCGGEKSFLIGFGPSWPPSYHHRAASCKGDDCRCTIQ------ALPHVLWGALLGGPERDDTIVQDGCPDFMHMEVALDFNAGFTSAVAAMKHLSL 735
            Y+  +VL  S LFYEAQRSG+LP + RI WRGDS L D    G+DLTGG++DAGD ++F   MA S+TVL WG++ Y DAY AAGEL ++  ++KW  D  +K+HT + EFY Q+ + ++DH  WG PE +   R +YK+T + PGS      A+ALAA S+AFK+ D  Y+  LL+HA+ L+ FA++  G +  D  + AA FY     Y DE  + AAWL++AT   +YL KA +YY        G SD      W + T GV +LL E      +K  +     +++    V  TPKGL++   WG NRYAAN AF +L+AA  G + + +RT+A  QIHYMLGD     +SFL+GFG S+P   HH ++SC      C+          P +L GAL+GGP+++D    D   D++  EV  D+NAGF SAVA +K L++
Sbjct:   32 YDYDQVLHDSILFYEAQRSGKLPSTNRIPWRGDSALNDKGQNGQDLTGGWYDAGDFVKFGFPMASSVTVLAWGVVEYRDAYKAAGELDNVLDSIKWATDYFIKAHTAKFEFYGQVGNGDIDHAYWGRPEDMKMKRPAYKITESKPGSDLAAETAAALAATSMAFKSTDRQYANKLLQHAKELYDFADKYRGKY-SDSILDAAXFYKSYSGYNDELVWGAAWLYRATXNVNYLKKAEAYYKTF-----GMSDKPWAFSWDEKTAGVQVLLAEITGKNSYKKDVQEYLDSWLPGNDVKYTPKGLAWRAKWGPNRYAANTAFLALLAANNGMKPNDYRTFAKKQIHYMLGD---SGQSFLVGFGKSFPQRPHHASSSCPXKPXPCSWNDNRNPGPNPQILTGALVGGPDQNDNF-NDERSDYVQNEVTTDYNAGFQSAVAGLKQLAM 465

The following BLAST results are available for this feature:

BLAST of NO12G00250 vs. NCBI_GenBank

BLAST of NO12G00250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM25871.1	1.100e-99	45.43	endo-beta- -glucanase [Nannochloropsis gaditana]	[more]
XP_022097093.1	1.200e-98	40.35	uncharacterized protein LOC110982761 [Acanthaster ...	[more]
EWM25995.1	3.400e-98	75.93	endo-beta- -glucanase, partial [Nannochloropsis ga...	[more]
XP_013419079.1	2.200e-97	38.75	uncharacterized protein LOC106179839 [Lingula anat...	[more]
XP_020614867.1	4.900e-97	44.30	uncharacterized protein LOC110053019 [Orbicella fa...	[more]
KXJ18436.1	6.500e-97	45.05	Endoglucanase A [Exaiptasia pallida]	[more]
XP_020893299.1	6.500e-97	45.05	uncharacterized protein LOC110232443 [Exaiptasia p...	[more]
XP_021363481.1	1.900e-96	37.87	uncharacterized protein LOC110456820 [Mizuhopecten...	[more]
EWM20555.1	3.500e-95	46.00	beta- -endoglucanase [Nannochloropsis gaditana]	[more]
XP_020893295.1	4.600e-95	43.47	uncharacterized protein LOC110232439 [Exaiptasia p...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL124	nonsL124	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR066	ncniR066	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR006	ngnoR006	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK009915	NSK009915	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO12G00250.1	NO12G00250.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|609653	gene_10086	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100897g4	gene4528	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO12G00250.1	NO12G00250.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO12G00250 ID=NO12G00250|Name=NO12G00250|organism=Nannochloropsis oceanica|type=gene|length=5089bp
ATGCAGAGGCCTAGCGGTAGGCAAGTGCGGTTCCAAGAAAAGCGACCGCG
CCAGGCACCCTCTTCATCTGTTCGAAGACTTCAATGCGCGCCTGCCCTTG
CCAACCCTAGAGGCCCCTACACTCGCTCCACCAATCTCCACCTTGCCATG
CTGCTGCTGACATTTCTACTCCTTGTCTGCGCCGTGGGAGCTGATCCATC
TCCGTCATCGTCgtacgtatgtttgttcgtctgtctccattcctcctctc
cctgccgccctccctccttctcacacttaactccctcgacccaccacata
gAGATCCACACATGGGACCCGTACCAGCCGAGCCTGACTTCTGGGGCCAG
ACGTACGATATCGATGGACGAGAAGgtacgcacgagacagagggaacgac
cgaggtgcaaaagataaagtgctaccagattgacacccttccctccctcc
ctcatttcttcagTCACGCTCGGTCAAATCGCCAGCGTGTTGAACCAGTC
TCGTCCCAATTACTTCTGGGGCGGGGAGGTGGTGTGTAGCACGTCTACCG
ACTACTGCTGCCCGGCCTACTGCTGCAATGTGCTCAAgtgagggagggag
ggagggagggagaggaggaaacgcctgagagaggaagcggtgctttgaag
cgtggtggataatcgttcggagaggtcaacaggggaacgaaaggcctgca
cccacaacatatccaaactaaagtctctccatcctccttccctccctccc
ttcctccttccctcctcttctccctcgctcgtcagCACGGTCCACGAGCT
GCAGAAGCCGATGGACATGTCCTTCCGGGAGCGACAAACAGCCTCGCTCA
ATGGCACCTTCCAGGTGATTTCATGGCAGGACGGCGGTGGGAAGAGAGGC
GGTGGTTTTTTCTTCGGGCGGCTATTCAAGGATTTTGAACACCCTATTTA
TGGAGgttggagggagggagggagggagggaaggagggagggaggaaggg
aagggagggatggtttggcagtcgactgatgccttcgcttaccatcctcc
ttggctgctttcctacccccacccctccctctctccctcccttcctccct
ccctcttcatattgtctgcagGCTGGACGCTGGAGGTGCACTTCAACAAG
CCCGTGTTCGAGCTGCAGTCGTTCAATGCCCGCATCGTGGGCTCGGGCGA
CGGGGCCAAGACGTATTTCTTGCAGCCAATGTACTGgtaagggagggagg
gagggaggagggagggaagagggaaaaactcaccaccggcattgcgtcct
ctgccagGAACCGAGACATTCCCAAGGGCAACCGCCGGATCCTCGTCCAT
Ggtacgtgcttccctccctccctccctccctccctccctcctccaatccc
tccctctcgtcctccctccctcccttcctagGCCTGACGACGCCTGTTGT
CGAGGATCGCATTCCCCTCACGGCCACCGGGGCCCTCTGGTATAGTCCCT
CAGAGCCAAGCGCGCCGCCTCCAGgtacaccccctccctccctccctccc
tccctccctccctcccatgctgaagccaagcacgatccatttcaatttgt
cgcttatcgcattcaaagggtctccctcccgtcctccctccttcctttcc
tccttcccttcttccctccctcccccctcccttcttccctccttccctcc
ctccccctcagGCCCGGGTCCCTACAAGATCGAGTCGAGGCCCGTCCCTC
CCCCTGCCCCCTCGCCAGGAGAGCGGTATAATCTAGCAGAAGTACTGCAG
gttaggaaaggagggagggagggaggtagggagggtgctgaggccgaggg
gaacaaacgtggagaaccgtacacaagcgtctactaaccctccctccctc
cccccctccctccctcccggcagCTGTCCTCCCTTTTCTACGAAGCGCAA
CGCTCGGGTCAGCTGCCCGAGTCCCAACGGATCAAGTGGCGCGGCGATTC
CTGCCTTAAAGACGGTCAGGACGTGGGAAAAGACCTCACGGGAGGTTACT
TTGACGCCGGCGACCACATTCAATTCACGgtgagacgggcctctttctct
tcattccctccctccctccctccctccctccctccttccctccttttcta
tgggtcggatggagttgtgcccctcgcgcgaagggctttggcttccctca
ccctctcgtctgcgagccctccctccctccctccctccctccctcccggg
tcctgtgcccagcttcctcacatttccatctccgcggtgaaaccgaacca
cagtccacgcgcaccaacgaccctctccctccctccctccctccctccct
ccctcgctgcagTTGACCATGGCGTATTCCATGACCGTCTTAATCTGGGG
CCTTATCAGATACGAGGACGCCTACACCGCGGCGGGCGAGCTCCAGCACA
TGCGACAGACAGTCAAGTGGGGATTGGACTCCCTCGTCAAGTCCCACACG
GATGAGAACGAGTTCTACGTGCAGgtagggagggagggggggcgggcggg
agggagggagggagggacggacggagggaggaaaggaaggagagcgaggg
tagatgcgaaattgcgcgagactgtgagattggattaatgtagtcaaagg
ggcattgaatttaagacacattccagcagtaatgagtttcttcacacgcg
gtggtacctcgtcctccctccctccctccttccctccctccttccctcct
ttcctcctccactccttcatcacttcacattccccttcctccctccctct
ctccctccttcagATCTCCGACGAGGTCGACCACTGCCGTTGGGGCCCCC
CCGAGACGATAAACTATCTCCGTCGCTCTTACAAAGTCACGTGCGCCAAT
CCCGGCTCACAGCCCGgtaggtagggagggagggagggagggagggaggg
agggagggagggcgggagggagggcagatcaccacaagaattcgcacgta
aagtaccgaatcactccctcctattttctcttcctccctccttcgctccc
ttcctgccccttctcctcctcagTGATGAACGCTGCCAGTGCCCTGGCTG
CTGGCTCCATCGCCTTCAAGACGTGCGATCCGTCGTACTCGGCCATGCTC
TTGAGGCATGCCGAAGGGCTTTTTGCCTTTGCGGAGCGATGCCCAGGGGA
CTGGATCAAGGATGgtagggagggagggagggagggaaggagggagggag
ggagggagggaaggagggagggagggaaggatggagagagggagggaggg
tcttgtgaaggaggagatgaaggttggagagaaatgcaagtatgacaaac
acacatccacatacacatccacactcatacacacaagcacaagcacgaca
aacactctttctctcacacgcgtacgacaaacactctctctcacacaccc
cttcagGGAGGATCCCGGCTGCAAACTTCTACGACGACGGCGGCCGGTAC
CTGGACGAACACGCTTTTGCCGCCGCCTGGCTGCACAAGgtctgtcggtc
cctccctcggtccctccctcggtccctccctcgttccctcccgtcttccc
tccctttcactccctccttccctccctcgcaggcaacgggccagtattct
gacctcgacatgactcgatcttactgctgcacatactgccaccctcaagg
cgtaaagattcatccctccctccctccctccctccctccctccctccctc
gcagGCGACCGGCCAGCAGCACTACCTTGACAAGGCGCTGTCTTACTACT
ACAGGTGCTGCTACGTTAAGGGTGGACAGAGTGATTATATCTCTGTCCTA
GACTGGGCCGATATGACCATGGGTGTCAACCTGCTCCTGTATGAGgtgag
gagggagggagggagggagggagggagggaggccagagagacccgcagca
gggaggttctcattccgccgtctgcaccagacgtcgtggccgcaatttta
gagacaaaaggtggtcacctctaaagatacgaggggatgaagggtggggg
aatcatcacatgtgtgcgtccttctacccctccctccctccttccattcc
cccctcccccccctctccttctctcagGCCTTGAGATGGGGTGATTTCAA
GGATGCCATCATTCACAGACACAAAGCATTCATCGAGAAAGTGTATCGTA
CACCCAAGGGCCTAAGTTACTACAACGACTGgtgaggcaagatgaaagga
gggagagaaagagggaggaagataaagagagagcagtggaggaggcatca
cgatatctgtcccctgtaaaaaggagcctctctaacggtaactcatggaa
agcaggacaagactcagtcgcccatcccctttcccccctccttccctcct
tccctccttcgttccagGGGCGCCAACCGCTATGCCGCCAATGCGGCCTT
CACCTCATTGGTTGCCGCTGAATTAGGATTCGAAGTCGACGGCTTTCGGA
CTTACGCCGCCTCGCAGATCCACTACATGCTAGgtacgatggtgatccct
ccttccctccctcctccccgctctccttccctctctccttccctccctcc
ccctcatcttcccaccgtcccttcatcctctcctcctagGTGACTGCTGC
GGCGGCGAGAAATCCTTCCTCATCGGCTTTGGTCCCTCGTGGCCTCCCTC
CTACCACCATCGGGCCGCCTCTTGCAAGGGAGACGATTGCCGATGCACCA
TTCAAGCGgttagcacgccctccttccctctttatccccctcacttctgt
ctctactcttctctttcttgcgtttggacacgccatgctctttcgccccg
cgaaaagtcttcactcaaacctgtctccctccctctctccttccctcctt
cctttcctccctcagCTGCCCCATGTCTTGTGGGGAGCGTTGTTGGGAGG
ACCAGAGAGAGACGATACGATTGTACAGGATGGTTGTCCGGACTTCATGC
ATATGGAGGTGGCCTTGGATTTTAACGCGGGCTTCACAAGCGCGGTTGCG
GCGATGAAGCATTTGAGCCTTCAGGGAATTCACCTTTAG

protein sequence of NO12G00250.1

>NO12G00250.1-protein ID=NO12G00250.1-protein|Name=NO12G00250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=740bp
MQRPSGRQVRFQEKRPRQAPSSSVRRLQCAPALANPRGPYTRSTNLHLAM
LLLTFLLLVCAVGADPSPSSSDPHMGPVPAEPDFWGQTYDIDGREVTLGQ
IASVLNQSRPNYFWGGEVVCSTSTDYCCPAYCCNVLNTVHELQKPMDMSF
RERQTASLNGTFQVISWQDGGGKRGGGFFFGRLFKDFEHPIYGGWTLEVH
FNKPVFELQSFNARIVGSGDGAKTYFLQPMYWNRDIPKGNRRILVHGLTT
PVVEDRIPLTATGALWYSPSEPSAPPPGPGPYKIESRPVPPPAPSPGERY
NLAEVLQLSSLFYEAQRSGQLPESQRIKWRGDSCLKDGQDVGKDLTGGYF
DAGDHIQFTLTMAYSMTVLIWGLIRYEDAYTAAGELQHMRQTVKWGLDSL
VKSHTDENEFYVQISDEVDHCRWGPPETINYLRRSYKVTCANPGSQPVMN
AASALAAGSIAFKTCDPSYSAMLLRHAEGLFAFAERCPGDWIKDGRIPAA
NFYDDGGRYLDEHAFAAAWLHKATGQQHYLDKALSYYYRCCYVKGGQSDY
ISVLDWADMTMGVNLLLYEALRWGDFKDAIIHRHKAFIEKVYRTPKGLSY
YNDWGANRYAANAAFTSLVAAELGFEVDGFRTYAASQIHYMLGDCCGGEK
SFLIGFGPSWPPSYHHRAASCKGDDCRCTIQALPHVLWGALLGGPERDDT
IVQDGCPDFMHMEVALDFNAGFTSAVAAMKHLSLQGIHL*

Synonyms

Publications