NO12G00170, NO12G00170 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G00170 vs. NCBI_GenBank
Match: CBJ27171.1 (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 274.6 bits (701), Expect = 1.000e-69 Identity = 174/417 (41.73%), Postives = 250/417 (59.95%), Query Frame = 0 Query: 447 ADTSMLSSTSFASLLSLGTQQRPLPTHAQLLSNVEKMGIHTPTLIQAAALPALL-EGKEAILHSYTGSGKTLAYLLPLLARVDPFQSHTQLLIIAPSRELAAQITSVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVLEKRKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGM-GALRQAVFASATGASESVRDLASNVMEGPYETISXXXXXXXXXXXXXXXXXXGEEP---SSAPLLPASIE----LPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNRIVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGIDIPGLTHVVNLDVPSSLEQYVHRAXXXXXXXXXXIVLSFSPPSTAYVLDKWSKKL 855 AD L + S LG Q R +L N++K+GI +PT +Q +A+ LL E ++ I+H++TGSGKTLAYLLPL+A DP + Q +++AP RELA+QI SV ++L +GT + + +IGGA+A RQVE+ + KPQ+++ TPGR+ E+V ++R+ ++G +VLDEVD LL Y +I ++ RQAVFASATG S V + M EEP L S + LP+++RH I+ P K D LRR L+T P PE V++FVND ++VN + E L+ GI AA +SG+++K RA + RL ++ + VTTEMAARG+D+ LTHVVN D+P+ + YVHRA XXXXXXXX IV++ + P +V+ K++K L Sbjct: 823 ADMETLEQQASFSFRDLGIQDR------TVLKNIKKLGIDSPTDVQVSAIRGLLSEDRDVIIHAHTGSGKTLAYLLPLIAATDPDSNALQAVVVAPGRELASQIFSVCEKLIQGTGLRSSMVIGGANALRQVERFKKVKPQIVIATPGRLCELVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDATPRGRRQAVFASATGRSPVVSAASERYMR--------------------------EEPLFVGGGDLGVGSGQRRGGLPSNIRHTIVTMPKVKKFDTLRRLLNTQPFPESVMIFVNDPIQVNWLTERLETVGIIAAPLSGESSKDDRAEIMRRLQDKRIAMVVTTEMAARGLDVAHLTHVVNYDLPTDADHYVHRAGXXXXXXXXGIVVNMATPDVKFVMGKFAKSL 1207
BLAST of NO12G00170 vs. NCBI_GenBank
Match: CEM05399.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 248.8 bits (634), Expect = 6.000e-62 Identity = 153/418 (36.60%), Postives = 222/418 (53.11%), Query Frame = 0 Query: 473 HAQLLSNVEKMGIHTPTLIQAAALPALLEGKEAILHSYTGSGKTLAYLLPLLAR----------------------VDPFQSHTQLLIIAPSRELAAQITSVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVLEKRKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGM-----GALRQAVFASATGASESVRDLASNVMEGPYETISXXXXXXXXXXXXXXXXXXGEEPSSAPLLPASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNRIVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGIDIPGLTHVVNLDVPSSLEQYVHRAXXXXXXXXXXIVLSFSPPSTAYVLDKWSKKLRTKLERVDI 864 +A ++ N+ + GI PT Q A+P +L+G + I+H++TGSGKTLAYLLPLL R V + +LLI+AP REL AQI V + EGT + A L+GGA+ Q+E+L+ P+V+VGTPGR+ + VL++RK + R LVLDEVD L+ + Y G + L+ + RQ +FASATGA +SV A M + I PL+P +I H + K+ + LR+FLHTDP + VL F N +V +V+ L K I AA +SG +K RA R+ +G++ + V+TE+ ARG+D+P L+HVVNLD+P+ E Y+HRA +V++F P T +V+ K K L + VD+ Sbjct: 373 NAMMVENLRRGGILNPTHTQIKAIPRILQGDDLIIHAHTGSGKTLAYLLPLLERMLNEHGATAATNATDINGNRGGVQGRRRGPELLIVAPGRELVAQIAKVCRVVLEGTGLRCAMLLGGANPKYQLEQLK-GGPEVVVGTPGRLYDFVLDRRKVDLSRVKYLVLDEVDQLIRDPYEGQLESLMATIPKGTHSTHRQTIFASATGAQKSVTQAAKRYMRPVWHVIRPGGVK--------------HSDEGVPLIPPNI------HHIFMCVREDKVTEALRKFLHTDPVDKRVLCFCNKQGRVKWLVDHLLQKQIIAAPLSGFTSKDDRAEVFKRMQNGQIGMAVSTELGARGLDVPWLSHVVNLDLPTDAEHYIHRAGRVGRAGNPGVVMNFVTPDTRFVIRKLEKALNIDIREVDL 769
BLAST of NO12G00170 vs. NCBI_GenBank
Match: WP_019532906.1 (ATP-dependent helicase, partial [Paenibacillus ginsengihumi]) HSP 1 Score: 226.1 bits (575), Expect = 4.200e-55 Identity = 141/384 (36.72%), Postives = 219/384 (57.03%), Query Frame = 0 Query: 477 LSNVEKMGIHTPTLIQAAALPALLEGKEAILHSYTGSGKTLAYLLPLLARVDPFQSHTQLLIIAPSRELAAQITSVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVLEKRKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGMGALRQAVFASATGASESVRDLASNVMEGPYETISXXXXXXXXXXXXXXXXXXGEEPSSAPLLPASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNRIVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGIDIPGLTHVVNLDVPSSLEQYVHRAXXXXXXXXXXIVLSFSPPSTAYVLDKWSKKLRTKLER 861 ++ ++++G+ TPT +QA A+P +LEGK+ ++ S TGSGKTLAY LPLL DP Q H Q +++AP+REL QI LT+GT I V LIGGAS RQ+E L+ +KP ++VGTPGR+ E+ L+ RK + LV+DEVD +L+ + +++G+ +Q +F SAT + +ME + ++P+ + PA P ++ H +++ + LD LRR + T P+ +VF+ D + V L+ G+ G+ GD K R + R GK+++ + T++AARG+D+P +THV++LD + + YVHR XXXXXXXXX S P +++DK+SK L ++ER Sbjct: 18 VARLKELGMETPTPVQAEAIPVILEGKDTVVQSQTGSGKTLAYALPLLQAADPAQKHVQAMVLAPTRELGMQIVRTFQSLTDGTGIRVQQLIGGASIQRQIEALK-KKPHIVVGTPGRILEL-LKLRKLSLHGVRQLVVDEVDQVLELGGLKETETILRGLRRDKQVLFFSAT--------IPPRIMEAVERWM--------------------QDPAFVRINPAERTSP-TIEHYYVVSEERDKLDTLRRLVRT-YNPKAAIVFIGDTEDIGETVAKLRFIGLSVEGLYGDAFKLDRVQAMQRFRDGKVQLLLATDVAARGLDLPNVTHVIHLDPATDADAYVHRTGXXXXXXXXXTAFSIVTPKEEFIMDKFSKALGIRIER 369
BLAST of NO12G00170 vs. NCBI_GenBank
Match: XP_005832953.1 (hypothetical protein GUITHDRAFT_70940, partial [Guillardia theta CCMP2712] >EKX45973.1 hypothetical protein GUITHDRAFT_70940, partial [Guillardia theta CCMP2712]) HSP 1 Score: 224.9 bits (572), Expect = 9.400e-55 Identity = 144/393 (36.64%), Postives = 215/393 (54.71%), Query Frame = 0 Query: 472 THAQLLSNVEKMGIHTPTLIQAAALPALLEGKEAILHSYTGSGKTLAYLLP----LLARVDPF-QSHTQLLIIAPSRELAAQITSVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVLEK-RKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGMGA-LRQAVFASATGASESVRDLASNVMEGPYETISXXXXXXXXXXXXXXXXXXGEEPSSAPLLPASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNRIVEALQAKGIDAAGISGDNNKQTRANTLGRL---TSGKLRVCVTTEMAARGIDIPGLTHVVNLDVPSSLEQYVHRAXXXXXXXXXXIVLSFSPPSTAYVLDKWSKKL 855 T LL N+ G TPT +Q ++ P +LEG + IL +YTGSGKTLA++LP LLA++D + LI+APSRELA QI V + GT++ IGGA+ RQ+E +R +P +LVGTPGR+ E+ + K R+ L++DEVD L ++ D+ +++Q + RQ +FASATG +V+ LA + +EP L A + LP LRH +++TP K + +++ + + L LVFVND +V+ I + L G+ AA + GD +K+ R + RL T G++ + V TE+AARGIDIPGL+HVV+LD+P+ YVHRA + P +V++K+ K+L Sbjct: 7 TSKALLDNLNANGFFTPTPVQKSSFPRILEGSDIILSAYTGSGKTLAFVLPIVQKLLAQLDSLDRKGPSFLIVAPSRELAIQILRVVQSVIVGTELFATQAIGGANIQRQIEAIRNSRPHILVGTPGRIVELASKMGAKIRLQGVKYLIVDEVDQCLKKAMQSDLNLILQACSSPARQTIFASATGNVNNVKSLAQSSFR--------------------------KEPLLLDL--AGLRLPPQLRHCVIVTPRVKKIALVKKIFNLNGMTGL-LVFVNDQRRVDIICDKLFENGLIAAPLKGDESKEDRKEVMRRLREGTLGEVPLVVATEIAARGIDIPGLSHVVSLDLPTDANHYVHRAGRTARGGAEGTSIVLCEPQEKFVVEKFCKEL 370
BLAST of NO12G00170 vs. NCBI_GenBank
Match: XP_005718662.1 (ATP dependant RNA helicase [Chondrus crispus] >CDF38757.1 ATP dependant RNA helicase [Chondrus crispus]) HSP 1 Score: 224.9 bits (572), Expect = 9.400e-55 Identity = 134/389 (34.45%), Postives = 211/389 (54.24%), Query Frame = 0 Query: 475 QLLSNV-EKMGIHTPTLIQAAALPALLEGKEAILHSYTGSGKTLAYLLPLLARVDPFQSHTQLLIIAPSRELAAQITSVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVLEKRKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGMGALRQAVFASATGASESVRDLASNVMEGPYETISXXXXXXXXXXXXXXXXXXGEEPSSAPLLPASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNRIVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGIDIPGLTHVVNLDVPSSLEQYVHRAXXXXXXXXXXIVLSFSPPSTAYVLDKWSKKLRTKLERVD 863 Q+L N+ E + I T T +Q +A+P +L+ ++ ++ S+TG+GKTLA+LLPLL ++ + Q +I+AP+REL QI + L EGT I ALIGGA+ RQV+KLR +P ++VGTPGR+AE+ E R+ R+ M V+DEVD + D+ L++ M Q V SAT +SVR A + P + + LP + H + P + ++ +R+ +HT+P P + FV+D +V+ +V+ L I A + G+ +K RA L G++ + VTTE+AARG+DIP ++HV NLD+P+ + YVHRA V+S + TA+V+ + K+L + R++ Sbjct: 186 QILKNLKEGLNIETATHVQLSAIPRVLDKRDVVIQSHTGTGKTLAFLLPLLDEIETESPYVQGVIVAPTRELGMQIFHECERLCEGTGIRSIALIGGANPVRQVDKLRKCQPHIVVGTPGRIAELE-ENRELRVRNVGMFVVDEVDQCVQAGMGEDVIYLLKTMMRRTQKVLVSATSDVDSVRSFAGKYLHKPV----------------------------LLRVGGAQRLPRQISHWFCVVPARMRVELVRKLMHTNPVPTRAIAFVDDPRRVDIVVDRLYQMKIVAGALRGNAHKLERAEVLTAFRKGRINLLVTTEVAARGLDIPEISHVFNLDLPTDGDHYVHRAGRCGRVRNVGTVVSITTAETAFVMRRLEKELGVSITRME 545
BLAST of NO12G00170 vs. NCBI_GenBank
Match: WP_057899354.1 (MULTISPECIES: ATP-dependent helicase [Aneurinibacillus] >AMA73627.1 hypothetical protein ACH33_12680 [Aneurinibacillus sp. XH2] >SDG84968.1 Superfamily II DNA and RNA helicase [Aneurinibacillus thermoaerophilus]) HSP 1 Score: 222.6 bits (566), Expect = 4.600e-54 Identity = 135/387 (34.88%), Postives = 207/387 (53.49%), Query Frame = 0 Query: 476 LLSNVEKMGIHTPTLIQAAALPALLEGKEAILHSYTGSGKTLAYLLPLLARVDPFQSHTQLLIIAPSRELAAQITSVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVLEKRKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGMGALRQAVFASATGASESVRDLASNVMEGPYETISXXXXXXXXXXXXXXXXXXGEEPSSAPLLPASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNRIVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGIDIPGLTHVVNLDVPSSLEQYVHRAXXXXXXXXXXIVLSFSPPSTAYVLDKWSKKLRTKL-ERV 862 L+ +E+M I TPT IQ +P LL G+ + S TG+GKTLAYLLP+L R+D Q LI+ P+REL QI V DEL GTDI ++GG + RQ+EKL+ +KP V+VG+PGR+ +++ EK+K ++ M+V+DE D +L+ + ++ +++ RQ SAT S V + E EEP + S LP ++ H ++T ++ D LRR LH P+ L+FV +V IV L KG++ AGI + NKQ R + + G+++ VTT++ ARG+D+ G+THVVN D+P + Y+HR + +S P ++ K +++LR ++ ERV Sbjct: 13 LIQGLERMNIKTPTPIQQRTIPLLLAGQSVVGESQTGTGKTLAYLLPILQRIDSTSVAVQALILVPTRELTVQIRDVLDELCAGTDIRFQIIMGGVDSKRQIEKLK-QKPHVIVGSPGRMYDLI-EKKKLKVHEVKMVVIDEADQMLEANIMPEVEAVIKRTPRDRQLFVFSAT-ISSLVEEWGKKWSE--------------------------EEPQVIKMKGKS-RLPETIEHYFIVTSEREKFDMLRRLLHA-LKPDRALIFVKKQHQVGEIVSWLSKKGVNVAGIHSEANKQEREQAMNGIRGGRIQYLVTTDLLARGLDVEGVTHVVNFDLPLDTDGYIHRVGRTGRAGKCGMAISLLAPKEKFMAGKLARQLRIEIPERV 368
BLAST of NO12G00170 vs. NCBI_GenBank
Match: WP_108466763.1 (ATP-dependent helicase [Paenibacillus sp. CAA11] >AWB45839.1 DEAD/DEAH box helicase [Paenibacillus sp. CAA11]) HSP 1 Score: 220.3 bits (560), Expect = 2.300e-53 Identity = 150/379 (39.58%), Postives = 212/379 (55.94%), Query Frame = 0 Query: 476 LLSNVEKMGIHTPTLIQAAALPALLEGKEAILHSYTGSGKTLAYLLPLLARVDPFQSHTQLLIIAPSRELAAQITSVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVLEKRKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGMGALRQAVFASATGASESVRDLASNVMEGPYETISXXXXXXXXXXXXXXXXXXGEEPSSAPLLPASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNRIVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGIDIPGLTHVVNLDVPSSLEQYVHRAXXXXXXXXXXIVLSFSPPSTAYVLDKWSKKL 855 L + + + I P+ +QA +PA+L G++ + S TG+GKTLAYLLP L ++DP TQ+LI+AP++ELA QI + E +I V ALIGGA+ RQVE+LR + PQ++VGTPGRV E+ L RK ++ ++V+DEVD L GD+ +++G RQ +F SAT E +R+LA M P E G +P SL H I + +D LRR + T A + VLVFVN+ + + + G+ A + GD +K TR+ L R G+ RV V +++AARG+DI GLT VVNLD P E YVHRA XXXXXXXX + +S P +++ K+S+ L Sbjct: 15 LTAKLAEYEITAPSPVQAETIPAVLAGRDVLAESQTGTGKTLAYLLPALQKIDPASRTTQVLILAPTQELAMQILHESQRYGENREIEVQALIGGAAIGRQVERLR-KHPQLVVGTPGRVREL-LALRKLKLHTVKLVVIDEVDQLFQLGGSGDVEQILKGTLRDRQLLFLSATVTPE-IRELAGREMRDPVEV--------------------GIKPEQ--------RTSESLEHLYFICEQRDKIDQLRRIIRTYDA-QKVLVFVNNTEDIGEVEAKMNYVGLSAGALYGDADKTTRSLVLRRFREGEYRVLVASDVAARGLDIEGLTLVVNLDPPMDAEHYVHRAGXXXXXXXXGVAVSIVNPRELFIIRKFSRAL 361
BLAST of NO12G00170 vs. NCBI_GenBank
Match: WP_035441784.1 (ATP-dependent helicase [Bacillus sp. JCM 19046] >GAF19212.1 ATP-dependent RNA helicase YfmL [Bacillus sp. JCM 19046]) HSP 1 Score: 219.5 bits (558), Expect = 3.900e-53 Identity = 139/391 (35.55%), Postives = 209/391 (53.45%), Query Frame = 0 Query: 475 QLLSNVEKMGIHTPTLIQAAALPALLEGKEAILHSYTGSGKTLAYLLPLLARVDPFQSHTQLLIIAPSRELAAQITSVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVLEKRKARIGRAHMLVLDEVD-MLLDESYYGDIRMLVQGMGALRQAVFASATGASESVRDLASNVMEGPYETISXXXXXXXXXXXXXXXXXXGEEPSSAPLLPASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNRIVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGIDIPGLTHVVNLDVPSSLEQYVHRAXXXXXXXXXXIVLSFSPPSTAYVLDKWSKKLRTKLERVDIA 865 ++ +N+ K GI TPT IQ A+PA LEGK +L S TGSGKTLAY LPLLA +D + TQ LIIAPS+ELA QI V E T I IGGA+ +RQ+EKL+ +KP + VGTPGRV E+V + +K ++ V+DEVD ++L++ + ++ L + +G Q +FASAT + LAS V + E S +PA + H ++ + +D +RR +H + + +VFVN K+ VE L+ + IDA G+S D++KQ R + + S + + V T++AARG+D+ +TH++ L+ P+ Y+HRA V+S Y +K+ L +E V++A Sbjct: 13 EIEANLSKAGIQTPTPIQKTAIPAALEGKNILLRSQTGSGKTLAYTLPLLASIDSEKLTTQALIIAPSQELAVQIEQVIKETIANTGITCQTFIGGANINRQIEKLKKKKPHIAVGTPGRVLELV-KTKKIKLADVGFYVIDEVDRLVLEDKSWSEVEELGKRIGYSAQFMFASATAPDKLETKLASFVKD----------------------IVRIEADGSV--------VPAQVEHVFVMIEARDRIDMVRRLIHAEGIKK-GIVFVNQLDKLTEAVEKLRYRKIDAVGLSSDSSKQERELAIQAMKSNEASILVATDVAARGLDLADVTHIIQLETPNEAASYLHRAGRTGRMNQSGKVISLFERRELYKKEKYENHLSISIEPVELA 371
BLAST of NO12G00170 vs. NCBI_GenBank
Match: WP_094094024.1 (ATP-dependent helicase [Paenibacillus physcomitrellae]) HSP 1 Score: 219.5 bits (558), Expect = 3.900e-53 Identity = 142/396 (35.86%), Postives = 214/396 (54.04%), Query Frame = 0 Query: 459 SLLSLGTQQRPLPTHAQLLSNVEKMGIHTPTLIQAAALPALLEGKEAILHSYTGSGKTLAYLLPLLARVDPFQSHTQLLIIAPSRELAAQITSVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVLEKRKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGMGALRQAVFASATGASESVRDLASNVMEGPYETISXXXXXXXXXXXXXXXXXXGEEPSSAPLLPASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNRIVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGIDIPGLTHVVNLDVPSSLEQYVHRAXXXXXXXXXXIVLSFSPPSTAYVLDKWSKKL 855 + +++G +QR L + + GI P+ +Q +A+PA+LEG + + S TG+GKTLAYLLP+L R+DP + Q LI+AP++ELA QI + EGT I ALIGGA+ RQVE+L+ PQ++VGTPGRV E+ L RK ++ MLV+DEVD L GD+ +++ RQ +F SAT ++ +R LA+ M+ P E G EP A+L H + + +D +RR + T P+ VLVFVN + + L G++A + GD +K TR+ TL R G+ RV V +++AARG+DI L V++LD + E YVHRA + +S P +++ K++++L Sbjct: 5 TFINIGVEQR-------LAERLAEFGITAPSPVQESAIPAVLEGCDVLAQSQTGTGKTLAYLLPVLQRIDPERKVMQALILAPTQELAMQILRESQRYAEGTGIEAQALIGGAAIGRQVERLK-RHPQLVVGTPGRVREL-LASRKLKLHETRMLVVDEVDQLFQLGGAGDVDQILKASLRDRQLLFLSAT-VTDEIRSLAAREMKDPVE--------------------IGIEPEQ--------RTSATLEHLYFVCEQRDKIDLVRRIIRTYDVPK-VLVFVNQIDSIGEVEAKLNYVGLNAGALYGDADKTTRSLTLRRFREGEYRVLVASDVAARGLDIEQLGMVIHLDPATDSENYVHRAGRTGRMGRKGLSISIVAPQETFIIRKFAREL 361
BLAST of NO12G00170 vs. NCBI_GenBank
Match: WP_018976725.1 (ATP-dependent helicase [Saccharibacillus kuerlensis]) HSP 1 Score: 219.2 bits (557), Expect = 5.100e-53 Identity = 152/376 (40.43%), Postives = 214/376 (56.91%), Query Frame = 0 Query: 484 GIHTPTLIQAAALPALLEGKEAILHSYTGSGKTLAYLLPLLARVDPFQSHTQLLIIAPSRELAAQITSVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVLEKRKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGMGALRQAVFASATGASESVRDLASNVMEGPYETISXXXXXXXXXXXXXXXXXXGEEPSSAPLLPASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNRIVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGIDIPGLTHVVNLDVPSSLEQYVHRAXXXXXXXXXXIVLSFSPPSTAYVLDKWSKKLRTKLE 860 GI TP+ IQA A+P +LEG++ + S TG+GKTLAYLLPLL R+DP + +Q+L+IAP++ELA QI ++ I LIGGASA RQVEKLR ++P ++VGTPGR+ E+ L RK ++ +VLDE D + D+R L++G RQ +F SAT VR LA M+ P + G EP +L +H + +D LRR + PE +VFVN A + + L G++A + GD++K TRA L + +GK R+ V T++AARG+DIPGL VV+LD S E YVH XXXXXXXXXX+ +S A+++ K+S++L T++E Sbjct: 25 GISTPSPIQAEAIPYILEGRDVLAQSQTGTGKTLAYLLPLLQRIDPDKKESQVLVIAPTQELAMQIVREGEKYGASLGIGTIGLIGGASAARQVEKLR-QRPHLVVGTPGRLREL-LSTRKLKLHEVRTIVLDEADQIFQMGGADDVRSLLKGALRDRQLIFLSAT-LGPDVRALADREMKDPVDV--------------------GIEPEQ--------KLVKLTQHLYFECQQRDRIDTLRRIVR-HYNPERAIVFVNQADTIAEVEAKLNHLGLEARTLYGDSDKVTRATVLSQFRAGKFRLLVATDVAARGLDIPGLELVVHLDPASDSEHYVHXXXXXXXXXXXXLSISIVTDRQAFIMRKFSRELGTEIE 368 The following BLAST results are available for this feature:
BLAST of NO12G00170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00170 ID=NO12G00170|Name=NO12G00170|organism=Nannochloropsis oceanica|type=gene|length=5865bpback to top protein sequence of NO12G00170.3 >NO12G00170.3-protein ID=NO12G00170.3-protein|Name=NO12G00170.3|organism=Nannochloropsis oceanica|type=polypeptide|length=866bpback to top protein sequence of NO12G00170.2 >NO12G00170.2-protein ID=NO12G00170.2-protein|Name=NO12G00170.2|organism=Nannochloropsis oceanica|type=polypeptide|length=867bpback to top protein sequence of NO12G00170.1 >NO12G00170.1-protein ID=NO12G00170.1-protein|Name=NO12G00170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=925bpback to top Synonyms
Publications
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