NO12G00170, NO12G00170 (gene) Nannochloropsis oceanica

Overview
NameNO12G00170
Unique NameNO12G00170
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5865
Alignment locationchr12:46647..52511 -

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Properties
Property NameValue
DescriptionDEAD-box ATP-dependent RNA helicase CshC
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:46647..52511 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO:0005524ATP binding
GO:0004386helicase activity
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014014RNA_helicase_DEAD_Q_motif
IPR011545DEAD/DEAH_box_helicase_dom
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
Homology
BLAST of NO12G00170 vs. NCBI_GenBank
Match: CBJ27171.1 (DEAD box helicase [Ectocarpus siliculosus])

HSP 1 Score: 274.6 bits (701), Expect = 1.000e-69
Identity = 174/417 (41.73%), Postives = 250/417 (59.95%), Query Frame = 0
Query:  447 ADTSMLSSTSFASLLSLGTQQRPLPTHAQLLSNVEKMGIHTPTLIQAAALPALL-EGKEAILHSYTGSGKTLAYLLPLLARVDPFQSHTQLLIIAPSRELAAQITSVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVLEKRKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGM-GALRQAVFASATGASESVRDLASNVMEGPYETISXXXXXXXXXXXXXXXXXXGEEP---SSAPLLPASIE----LPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNRIVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGIDIPGLTHVVNLDVPSSLEQYVHRAXXXXXXXXXXIVLSFSPPSTAYVLDKWSKKL 855
            AD   L   +  S   LG Q R       +L N++K+GI +PT +Q +A+  LL E ++ I+H++TGSGKTLAYLLPL+A  DP  +  Q +++AP RELA+QI SV ++L +GT +  + +IGGA+A RQVE+ +  KPQ+++ TPGR+ E+V ++R+ ++G    +VLDEVD LL   Y  +I  ++       RQAVFASATG S  V   +   M                           EEP       L   S +    LP+++RH I+  P  K  D LRR L+T P PE V++FVND ++VN + E L+  GI AA +SG+++K  RA  + RL   ++ + VTTEMAARG+D+  LTHVVN D+P+  + YVHRA XXXXXXXX IV++ + P   +V+ K++K L
Sbjct:  823 ADMETLEQQASFSFRDLGIQDR------TVLKNIKKLGIDSPTDVQVSAIRGLLSEDRDVIIHAHTGSGKTLAYLLPLIAATDPDSNALQAVVVAPGRELASQIFSVCEKLIQGTGLRSSMVIGGANALRQVERFKKVKPQIVIATPGRLCELVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDATPRGRRQAVFASATGRSPVVSAASERYMR--------------------------EEPLFVGGGDLGVGSGQRRGGLPSNIRHTIVTMPKVKKFDTLRRLLNTQPFPESVMIFVNDPIQVNWLTERLETVGIIAAPLSGESSKDDRAEIMRRLQDKRIAMVVTTEMAARGLDVAHLTHVVNYDLPTDADHYVHRAGXXXXXXXXGIVVNMATPDVKFVMGKFAKSL 1207          
BLAST of NO12G00170 vs. NCBI_GenBank
Match: CEM05399.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 248.8 bits (634), Expect = 6.000e-62
Identity = 153/418 (36.60%), Postives = 222/418 (53.11%), Query Frame = 0
Query:  473 HAQLLSNVEKMGIHTPTLIQAAALPALLEGKEAILHSYTGSGKTLAYLLPLLAR----------------------VDPFQSHTQLLIIAPSRELAAQITSVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVLEKRKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGM-----GALRQAVFASATGASESVRDLASNVMEGPYETISXXXXXXXXXXXXXXXXXXGEEPSSAPLLPASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNRIVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGIDIPGLTHVVNLDVPSSLEQYVHRAXXXXXXXXXXIVLSFSPPSTAYVLDKWSKKLRTKLERVDI 864
            +A ++ N+ + GI  PT  Q  A+P +L+G + I+H++TGSGKTLAYLLPLL R                      V   +   +LLI+AP REL AQI  V   + EGT +  A L+GGA+   Q+E+L+   P+V+VGTPGR+ + VL++RK  + R   LVLDEVD L+ + Y G +  L+  +        RQ +FASATGA +SV   A   M   +  I                          PL+P +I       H  +     K+ + LR+FLHTDP  + VL F N   +V  +V+ L  K I AA +SG  +K  RA    R+ +G++ + V+TE+ ARG+D+P L+HVVNLD+P+  E Y+HRA          +V++F  P T +V+ K  K L   +  VD+
Sbjct:  373 NAMMVENLRRGGILNPTHTQIKAIPRILQGDDLIIHAHTGSGKTLAYLLPLLERMLNEHGATAATNATDINGNRGGVQGRRRGPELLIVAPGRELVAQIAKVCRVVLEGTGLRCAMLLGGANPKYQLEQLK-GGPEVVVGTPGRLYDFVLDRRKVDLSRVKYLVLDEVDQLIRDPYEGQLESLMATIPKGTHSTHRQTIFASATGAQKSVTQAAKRYMRPVWHVIRPGGVK--------------HSDEGVPLIPPNI------HHIFMCVREDKVTEALRKFLHTDPVDKRVLCFCNKQGRVKWLVDHLLQKQIIAAPLSGFTSKDDRAEVFKRMQNGQIGMAVSTELGARGLDVPWLSHVVNLDLPTDAEHYIHRAGRVGRAGNPGVVMNFVTPDTRFVIRKLEKALNIDIREVDL 769          
BLAST of NO12G00170 vs. NCBI_GenBank
Match: WP_019532906.1 (ATP-dependent helicase, partial [Paenibacillus ginsengihumi])

HSP 1 Score: 226.1 bits (575), Expect = 4.200e-55
Identity = 141/384 (36.72%), Postives = 219/384 (57.03%), Query Frame = 0
Query:  477 LSNVEKMGIHTPTLIQAAALPALLEGKEAILHSYTGSGKTLAYLLPLLARVDPFQSHTQLLIIAPSRELAAQITSVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVLEKRKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGMGALRQAVFASATGASESVRDLASNVMEGPYETISXXXXXXXXXXXXXXXXXXGEEPSSAPLLPASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNRIVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGIDIPGLTHVVNLDVPSSLEQYVHRAXXXXXXXXXXIVLSFSPPSTAYVLDKWSKKLRTKLER 861
            ++ ++++G+ TPT +QA A+P +LEGK+ ++ S TGSGKTLAY LPLL   DP Q H Q +++AP+REL  QI      LT+GT I V  LIGGAS  RQ+E L+ +KP ++VGTPGR+ E+ L+ RK  +     LV+DEVD +L+     +   +++G+   +Q +F SAT        +   +ME     +                    ++P+   + PA    P ++ H  +++  +  LD LRR + T   P+  +VF+ D   +   V  L+  G+   G+ GD  K  R   + R   GK+++ + T++AARG+D+P +THV++LD  +  + YVHR  XXXXXXXXX   S   P   +++DK+SK L  ++ER
Sbjct:   18 VARLKELGMETPTPVQAEAIPVILEGKDTVVQSQTGSGKTLAYALPLLQAADPAQKHVQAMVLAPTRELGMQIVRTFQSLTDGTGIRVQQLIGGASIQRQIEALK-KKPHIVVGTPGRILEL-LKLRKLSLHGVRQLVVDEVDQVLELGGLKETETILRGLRRDKQVLFFSAT--------IPPRIMEAVERWM--------------------QDPAFVRINPAERTSP-TIEHYYVVSEERDKLDTLRRLVRT-YNPKAAIVFIGDTEDIGETVAKLRFIGLSVEGLYGDAFKLDRVQAMQRFRDGKVQLLLATDVAARGLDLPNVTHVIHLDPATDADAYVHRTGXXXXXXXXXTAFSIVTPKEEFIMDKFSKALGIRIER 369          
BLAST of NO12G00170 vs. NCBI_GenBank
Match: XP_005832953.1 (hypothetical protein GUITHDRAFT_70940, partial [Guillardia theta CCMP2712] >EKX45973.1 hypothetical protein GUITHDRAFT_70940, partial [Guillardia theta CCMP2712])

HSP 1 Score: 224.9 bits (572), Expect = 9.400e-55
Identity = 144/393 (36.64%), Postives = 215/393 (54.71%), Query Frame = 0
Query:  472 THAQLLSNVEKMGIHTPTLIQAAALPALLEGKEAILHSYTGSGKTLAYLLP----LLARVDPF-QSHTQLLIIAPSRELAAQITSVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVLEK-RKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGMGA-LRQAVFASATGASESVRDLASNVMEGPYETISXXXXXXXXXXXXXXXXXXGEEPSSAPLLPASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNRIVEALQAKGIDAAGISGDNNKQTRANTLGRL---TSGKLRVCVTTEMAARGIDIPGLTHVVNLDVPSSLEQYVHRAXXXXXXXXXXIVLSFSPPSTAYVLDKWSKKL 855
            T   LL N+   G  TPT +Q ++ P +LEG + IL +YTGSGKTLA++LP    LLA++D   +     LI+APSRELA QI  V   +  GT++     IGGA+  RQ+E +R  +P +LVGTPGR+ E+  +   K R+     L++DEVD  L ++   D+ +++Q   +  RQ +FASATG   +V+ LA +                             +EP    L  A + LP  LRH +++TP  K +  +++  + +    L LVFVND  +V+ I + L   G+ AA + GD +K+ R   + RL   T G++ + V TE+AARGIDIPGL+HVV+LD+P+    YVHRA            +    P   +V++K+ K+L
Sbjct:    7 TSKALLDNLNANGFFTPTPVQKSSFPRILEGSDIILSAYTGSGKTLAFVLPIVQKLLAQLDSLDRKGPSFLIVAPSRELAIQILRVVQSVIVGTELFATQAIGGANIQRQIEAIRNSRPHILVGTPGRIVELASKMGAKIRLQGVKYLIVDEVDQCLKKAMQSDLNLILQACSSPARQTIFASATGNVNNVKSLAQSSFR--------------------------KEPLLLDL--AGLRLPPQLRHCVIVTPRVKKIALVKKIFNLNGMTGL-LVFVNDQRRVDIICDKLFENGLIAAPLKGDESKEDRKEVMRRLREGTLGEVPLVVATEIAARGIDIPGLSHVVSLDLPTDANHYVHRAGRTARGGAEGTSIVLCEPQEKFVVEKFCKEL 370          
BLAST of NO12G00170 vs. NCBI_GenBank
Match: XP_005718662.1 (ATP dependant RNA helicase [Chondrus crispus] >CDF38757.1 ATP dependant RNA helicase [Chondrus crispus])

HSP 1 Score: 224.9 bits (572), Expect = 9.400e-55
Identity = 134/389 (34.45%), Postives = 211/389 (54.24%), Query Frame = 0
Query:  475 QLLSNV-EKMGIHTPTLIQAAALPALLEGKEAILHSYTGSGKTLAYLLPLLARVDPFQSHTQLLIIAPSRELAAQITSVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVLEKRKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGMGALRQAVFASATGASESVRDLASNVMEGPYETISXXXXXXXXXXXXXXXXXXGEEPSSAPLLPASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNRIVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGIDIPGLTHVVNLDVPSSLEQYVHRAXXXXXXXXXXIVLSFSPPSTAYVLDKWSKKLRTKLERVD 863
            Q+L N+ E + I T T +Q +A+P +L+ ++ ++ S+TG+GKTLA+LLPLL  ++    + Q +I+AP+REL  QI    + L EGT I   ALIGGA+  RQV+KLR  +P ++VGTPGR+AE+  E R+ R+    M V+DEVD  +      D+  L++ M    Q V  SAT   +SVR  A   +  P                                +  +  LP  + H   + P +  ++ +R+ +HT+P P   + FV+D  +V+ +V+ L    I A  + G+ +K  RA  L     G++ + VTTE+AARG+DIP ++HV NLD+P+  + YVHRA           V+S +   TA+V+ +  K+L   + R++
Sbjct:  186 QILKNLKEGLNIETATHVQLSAIPRVLDKRDVVIQSHTGTGKTLAFLLPLLDEIETESPYVQGVIVAPTRELGMQIFHECERLCEGTGIRSIALIGGANPVRQVDKLRKCQPHIVVGTPGRIAELE-ENRELRVRNVGMFVVDEVDQCVQAGMGEDVIYLLKTMMRRTQKVLVSATSDVDSVRSFAGKYLHKPV----------------------------LLRVGGAQRLPRQISHWFCVVPARMRVELVRKLMHTNPVPTRAIAFVDDPRRVDIVVDRLYQMKIVAGALRGNAHKLERAEVLTAFRKGRINLLVTTEVAARGLDIPEISHVFNLDLPTDGDHYVHRAGRCGRVRNVGTVVSITTAETAFVMRRLEKELGVSITRME 545          
BLAST of NO12G00170 vs. NCBI_GenBank
Match: WP_057899354.1 (MULTISPECIES: ATP-dependent helicase [Aneurinibacillus] >AMA73627.1 hypothetical protein ACH33_12680 [Aneurinibacillus sp. XH2] >SDG84968.1 Superfamily II DNA and RNA helicase [Aneurinibacillus thermoaerophilus])

HSP 1 Score: 222.6 bits (566), Expect = 4.600e-54
Identity = 135/387 (34.88%), Postives = 207/387 (53.49%), Query Frame = 0
Query:  476 LLSNVEKMGIHTPTLIQAAALPALLEGKEAILHSYTGSGKTLAYLLPLLARVDPFQSHTQLLIIAPSRELAAQITSVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVLEKRKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGMGALRQAVFASATGASESVRDLASNVMEGPYETISXXXXXXXXXXXXXXXXXXGEEPSSAPLLPASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNRIVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGIDIPGLTHVVNLDVPSSLEQYVHRAXXXXXXXXXXIVLSFSPPSTAYVLDKWSKKLRTKL-ERV 862
            L+  +E+M I TPT IQ   +P LL G+  +  S TG+GKTLAYLLP+L R+D      Q LI+ P+REL  QI  V DEL  GTDI    ++GG  + RQ+EKL+ +KP V+VG+PGR+ +++ EK+K ++    M+V+DE D +L+ +   ++  +++     RQ    SAT  S  V +      E                          EEP    +   S  LP ++ H  ++T  ++  D LRR LH    P+  L+FV    +V  IV  L  KG++ AGI  + NKQ R   +  +  G+++  VTT++ ARG+D+ G+THVVN D+P   + Y+HR           + +S   P   ++  K +++LR ++ ERV
Sbjct:   13 LIQGLERMNIKTPTPIQQRTIPLLLAGQSVVGESQTGTGKTLAYLLPILQRIDSTSVAVQALILVPTRELTVQIRDVLDELCAGTDIRFQIIMGGVDSKRQIEKLK-QKPHVIVGSPGRMYDLI-EKKKLKVHEVKMVVIDEADQMLEANIMPEVEAVIKRTPRDRQLFVFSAT-ISSLVEEWGKKWSE--------------------------EEPQVIKMKGKS-RLPETIEHYFIVTSEREKFDMLRRLLHA-LKPDRALIFVKKQHQVGEIVSWLSKKGVNVAGIHSEANKQEREQAMNGIRGGRIQYLVTTDLLARGLDVEGVTHVVNFDLPLDTDGYIHRVGRTGRAGKCGMAISLLAPKEKFMAGKLARQLRIEIPERV 368          
BLAST of NO12G00170 vs. NCBI_GenBank
Match: WP_108466763.1 (ATP-dependent helicase [Paenibacillus sp. CAA11] >AWB45839.1 DEAD/DEAH box helicase [Paenibacillus sp. CAA11])

HSP 1 Score: 220.3 bits (560), Expect = 2.300e-53
Identity = 150/379 (39.58%), Postives = 212/379 (55.94%), Query Frame = 0
Query:  476 LLSNVEKMGIHTPTLIQAAALPALLEGKEAILHSYTGSGKTLAYLLPLLARVDPFQSHTQLLIIAPSRELAAQITSVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVLEKRKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGMGALRQAVFASATGASESVRDLASNVMEGPYETISXXXXXXXXXXXXXXXXXXGEEPSSAPLLPASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNRIVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGIDIPGLTHVVNLDVPSSLEQYVHRAXXXXXXXXXXIVLSFSPPSTAYVLDKWSKKL 855
            L + + +  I  P+ +QA  +PA+L G++ +  S TG+GKTLAYLLP L ++DP    TQ+LI+AP++ELA QI   +    E  +I V ALIGGA+  RQVE+LR + PQ++VGTPGRV E+ L  RK ++    ++V+DEVD L      GD+  +++G    RQ +F SAT   E +R+LA   M  P E                     G +P              SL H   I   +  +D LRR + T  A + VLVFVN+   +  +   +   G+ A  + GD +K TR+  L R   G+ RV V +++AARG+DI GLT VVNLD P   E YVHRA XXXXXXXX + +S   P   +++ K+S+ L
Sbjct:   15 LTAKLAEYEITAPSPVQAETIPAVLAGRDVLAESQTGTGKTLAYLLPALQKIDPASRTTQVLILAPTQELAMQILHESQRYGENREIEVQALIGGAAIGRQVERLR-KHPQLVVGTPGRVREL-LALRKLKLHTVKLVVIDEVDQLFQLGGSGDVEQILKGTLRDRQLLFLSATVTPE-IRELAGREMRDPVEV--------------------GIKPEQ--------RTSESLEHLYFICEQRDKIDQLRRIIRTYDA-QKVLVFVNNTEDIGEVEAKMNYVGLSAGALYGDADKTTRSLVLRRFREGEYRVLVASDVAARGLDIEGLTLVVNLDPPMDAEHYVHRAGXXXXXXXXGVAVSIVNPRELFIIRKFSRAL 361          
BLAST of NO12G00170 vs. NCBI_GenBank
Match: WP_035441784.1 (ATP-dependent helicase [Bacillus sp. JCM 19046] >GAF19212.1 ATP-dependent RNA helicase YfmL [Bacillus sp. JCM 19046])

HSP 1 Score: 219.5 bits (558), Expect = 3.900e-53
Identity = 139/391 (35.55%), Postives = 209/391 (53.45%), Query Frame = 0
Query:  475 QLLSNVEKMGIHTPTLIQAAALPALLEGKEAILHSYTGSGKTLAYLLPLLARVDPFQSHTQLLIIAPSRELAAQITSVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVLEKRKARIGRAHMLVLDEVD-MLLDESYYGDIRMLVQGMGALRQAVFASATGASESVRDLASNVMEGPYETISXXXXXXXXXXXXXXXXXXGEEPSSAPLLPASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNRIVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGIDIPGLTHVVNLDVPSSLEQYVHRAXXXXXXXXXXIVLSFSPPSTAYVLDKWSKKLRTKLERVDIA 865
            ++ +N+ K GI TPT IQ  A+PA LEGK  +L S TGSGKTLAY LPLLA +D  +  TQ LIIAPS+ELA QI  V  E    T I     IGGA+ +RQ+EKL+ +KP + VGTPGRV E+V + +K ++      V+DEVD ++L++  + ++  L + +G   Q +FASAT   +    LAS V +                          E   S         +PA + H  ++   +  +D +RR +H +   +  +VFVN   K+   VE L+ + IDA G+S D++KQ R   +  + S +  + V T++AARG+D+  +TH++ L+ P+    Y+HRA           V+S       Y  +K+   L   +E V++A
Sbjct:   13 EIEANLSKAGIQTPTPIQKTAIPAALEGKNILLRSQTGSGKTLAYTLPLLASIDSEKLTTQALIIAPSQELAVQIEQVIKETIANTGITCQTFIGGANINRQIEKLKKKKPHIAVGTPGRVLELV-KTKKIKLADVGFYVIDEVDRLVLEDKSWSEVEELGKRIGYSAQFMFASATAPDKLETKLASFVKD----------------------IVRIEADGSV--------VPAQVEHVFVMIEARDRIDMVRRLIHAEGIKK-GIVFVNQLDKLTEAVEKLRYRKIDAVGLSSDSSKQERELAIQAMKSNEASILVATDVAARGLDLADVTHIIQLETPNEAASYLHRAGRTGRMNQSGKVISLFERRELYKKEKYENHLSISIEPVELA 371          
BLAST of NO12G00170 vs. NCBI_GenBank
Match: WP_094094024.1 (ATP-dependent helicase [Paenibacillus physcomitrellae])

HSP 1 Score: 219.5 bits (558), Expect = 3.900e-53
Identity = 142/396 (35.86%), Postives = 214/396 (54.04%), Query Frame = 0
Query:  459 SLLSLGTQQRPLPTHAQLLSNVEKMGIHTPTLIQAAALPALLEGKEAILHSYTGSGKTLAYLLPLLARVDPFQSHTQLLIIAPSRELAAQITSVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVLEKRKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGMGALRQAVFASATGASESVRDLASNVMEGPYETISXXXXXXXXXXXXXXXXXXGEEPSSAPLLPASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNRIVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGIDIPGLTHVVNLDVPSSLEQYVHRAXXXXXXXXXXIVLSFSPPSTAYVLDKWSKKL 855
            + +++G +QR       L   + + GI  P+ +Q +A+PA+LEG + +  S TG+GKTLAYLLP+L R+DP +   Q LI+AP++ELA QI   +    EGT I   ALIGGA+  RQVE+L+   PQ++VGTPGRV E+ L  RK ++    MLV+DEVD L      GD+  +++     RQ +F SAT  ++ +R LA+  M+ P E                     G EP             A+L H   +   +  +D +RR + T   P+ VLVFVN    +  +   L   G++A  + GD +K TR+ TL R   G+ RV V +++AARG+DI  L  V++LD  +  E YVHRA          + +S   P   +++ K++++L
Sbjct:    5 TFINIGVEQR-------LAERLAEFGITAPSPVQESAIPAVLEGCDVLAQSQTGTGKTLAYLLPVLQRIDPERKVMQALILAPTQELAMQILRESQRYAEGTGIEAQALIGGAAIGRQVERLK-RHPQLVVGTPGRVREL-LASRKLKLHETRMLVVDEVDQLFQLGGAGDVDQILKASLRDRQLLFLSAT-VTDEIRSLAAREMKDPVE--------------------IGIEPEQ--------RTSATLEHLYFVCEQRDKIDLVRRIIRTYDVPK-VLVFVNQIDSIGEVEAKLNYVGLNAGALYGDADKTTRSLTLRRFREGEYRVLVASDVAARGLDIEQLGMVIHLDPATDSENYVHRAGRTGRMGRKGLSISIVAPQETFIIRKFAREL 361          
BLAST of NO12G00170 vs. NCBI_GenBank
Match: WP_018976725.1 (ATP-dependent helicase [Saccharibacillus kuerlensis])

HSP 1 Score: 219.2 bits (557), Expect = 5.100e-53
Identity = 152/376 (40.43%), Postives = 214/376 (56.91%), Query Frame = 0
Query:  484 GIHTPTLIQAAALPALLEGKEAILHSYTGSGKTLAYLLPLLARVDPFQSHTQLLIIAPSRELAAQITSVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVLEKRKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGMGALRQAVFASATGASESVRDLASNVMEGPYETISXXXXXXXXXXXXXXXXXXGEEPSSAPLLPASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNRIVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGIDIPGLTHVVNLDVPSSLEQYVHRAXXXXXXXXXXIVLSFSPPSTAYVLDKWSKKLRTKLE 860
            GI TP+ IQA A+P +LEG++ +  S TG+GKTLAYLLPLL R+DP +  +Q+L+IAP++ELA QI    ++      I    LIGGASA RQVEKLR ++P ++VGTPGR+ E+ L  RK ++     +VLDE D +       D+R L++G    RQ +F SAT     VR LA   M+ P +                     G EP          +L    +H       +  +D LRR +     PE  +VFVN A  +  +   L   G++A  + GD++K TRA  L +  +GK R+ V T++AARG+DIPGL  VV+LD  S  E YVH  XXXXXXXXXX+ +S      A+++ K+S++L T++E
Sbjct:   25 GISTPSPIQAEAIPYILEGRDVLAQSQTGTGKTLAYLLPLLQRIDPDKKESQVLVIAPTQELAMQIVREGEKYGASLGIGTIGLIGGASAARQVEKLR-QRPHLVVGTPGRLREL-LSTRKLKLHEVRTIVLDEADQIFQMGGADDVRSLLKGALRDRQLIFLSAT-LGPDVRALADREMKDPVDV--------------------GIEPEQ--------KLVKLTQHLYFECQQRDRIDTLRRIVR-HYNPERAIVFVNQADTIAEVEAKLNHLGLEARTLYGDSDKVTRATVLSQFRAGKFRLLVATDVAARGLDIPGLELVVHLDPASDSEHYVHXXXXXXXXXXXXLSISIVTDRQAFIMRKFSRELGTEIE 368          
The following BLAST results are available for this feature:
BLAST of NO12G00170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ27171.11.000e-6941.73DEAD box helicase [Ectocarpus siliculosus][more]
CEM05399.16.000e-6236.60unnamed protein product [Vitrella brassicaformis C... [more]
WP_019532906.14.200e-5536.72ATP-dependent helicase, partial [Paenibacillus gin... [more]
XP_005832953.19.400e-5536.64hypothetical protein GUITHDRAFT_70940, partial [Gu... [more]
XP_005718662.19.400e-5534.45ATP dependant RNA helicase [Chondrus crispus] >CDF... [more]
WP_057899354.14.600e-5434.88MULTISPECIES: ATP-dependent helicase [Aneurinibaci... [more]
WP_108466763.12.300e-5339.58ATP-dependent helicase [Paenibacillus sp. CAA11] >... [more]
WP_035441784.13.900e-5335.55ATP-dependent helicase [Bacillus sp. JCM 19046] >G... [more]
WP_094094024.13.900e-5335.86ATP-dependent helicase [Paenibacillus physcomitrel... [more]
WP_018976725.15.100e-5340.43ATP-dependent helicase [Saccharibacillus kuerlensi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR066ncniR066Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009904NSK009904Nannochloropsis salina (N. salina CCMP1776)gene


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|609608gene_10076Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G00170.3NO12G00170.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO12G00170.2NO12G00170.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO12G00170.1NO12G00170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G00170.3NO12G00170.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO12G00170.2NO12G00170.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO12G00170.1NO12G00170.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G00170 ID=NO12G00170|Name=NO12G00170|organism=Nannochloropsis oceanica|type=gene|length=5865bp
CAGGAACATGGATGAACACCGTCCGCATTATCCGCAACCGCACCAAAAGA
GACTACGAAGAAAAATGCCCGCAGCTTGTGGACGTGGGAGCGTGCTTCTT
TTCTCCTGCCTGGgtgagtccttccctcttcattgcttttgtcaaggaga
gggataccaacaggggggcttgtgccataccctcctttttgtcaggatgt
tcttacctatctaattaattgtacaaggaaaataataagatagtaacaat
gataataataatcataatcataataataatcataatcataataataataa
taatcataatcataattatgattatgattattattattattataaatgat
atatttacaaataaatcaaaaacacacgacggtggtgatgttccattctg
cgattctgattcagagccccctttcctctttcccctcaaaaaggggggag
cataagggggggggggcgcacgtgatctcagcataacaataaagcaatcc
ttcgccggtagctccttctgaaccgtcttcttgggtttatccatgcatat
gtagaatatagtctcttttacatttgtctattttttgaaaacagtagatc
taaatatagattcggctgttacggtttcagagctttaaactcacacctta
cggccctccctctccttccctccctcccttcctcccttcctcagGCGCCG
CCCTCCTCTCCGCCTCTCTCAGCAAGTCCACAACCGCCTTTGTTCCTCTC
TCGCTCCCTCCCTCCTCGTCTTCCTCCCTCCCTCAGCCTTCCTTCTTTTT
TGTAAAGGGGCTAAGAATGAGTAGAGTCCGGTTATTCTTTGCTGGCCGGC
CGTCCCGAGGAGGAGGAGGAGGGGGAGGTAGAGGAGGAGGAGGAGGGGGG
AGAAGGAAGGAGGGGGGAAGGGAGGGAGGGAAGGAGGGAGAGGAGAAGGA
GGACATTGTCAGGGAGTGGGGAGAGAATTTTGGGGGAAAGAAGAAACTGT
TTTCGACTCCTACCAGGGGAGAGGAGGGAGGGTGGGAGGAGGGGGAGGGA
GGAGGGGGAGGGAGGGGGAGGAGGATAAACACAGATGGGAGGGGGGGGAA
GAAGAAGGGAGGAGGAGGAGGCGGCGGCGGCGGAGGAGGAGGAGGCCCGA
TGACGCCTTTGAGCAATGTCCAGCTGAAGAAACTCAGCAAGTCGGGGCGA
CAGgtggggagggagggagggagagagggagggaaggaagggatccagaa
catgcttgagagagaggtactgcctgagaccatcctccgtcgtcgctatc
cctctgacgactcctccctccctcccccttccctccctccctccctccct
ccctagAACCCTGTTCTACGCATGCTCCTGGCGAAGCAGCCGGGCCTGTT
GGATCAGTCGGTGGAGGAGCTCGAGAAGGAGCTCGAAGTCAAGTTCGACA
AGACCATCAGgtgggtgggggtacgccctccctccctccctccctccctc
cctccctcccccctcccttcctcccctcctcccttcctatcagcccagag
agagaatcttccctcccacccatccgcctcccctccttcttgccctcccc
ctctctcgtccagcctcatctccctccctcccttcccacgccacgaaatt
ccggtccacatcctcactccgggggacaccctccctccctccctccctcc
ctccctccctccctccctccctccctccctcccttcccagGAAGCGCGGG
CTCGAGTACTACTACGCGGAAGAAGACGCCGAGGAGCGAGCCCGAGCCGA
GGCCCGCCTGGCGCCGATGGGGGGGGAGGGAGGAAAAGCCGTCAGAGACG
GAGTGATGCGGAGGgtgcgcagggagggaaggagggagggagggagggag
ggagggggaggggtagggggatgatgttgatggcagggggggaggggcgg
ctgtcagagatggtgggatgtggattgcatatctttctcccctccctccc
tccctccttccctcccttttggtggccatgtatcaatccacgcttcccct
ccccttcccttcctccctcccttccctctttctccgcagGAAGAGGACGC
GCCCATCGAGGAGCTGACGGAGGAGGAGATGCTGTCGCTCGGCCTGGAGC
TGGACGGGGGGGAGGAGGAGGAGGATGCCAGTGATGAGCCGgtaggaagg
gagggagggagggagggagggagggagggcgagcagcagcagccgccgca
gcacatgtctgacagccagcagtctaaccacccttcccgccccctccctc
ccttcttccctcccttcctcagGATGACGGCACGGAGATCACCGTCGAGG
ACAACGGCGTATACCCCGAGGACGAGGACGAGGAAGAGGGCTGGAGGGAG
GGAGGGAGGGAGGGAGCTTCCGTCACAGCCCCTGCGAAGGGTTTCACACT
CCGTCCGCCTCCGTCTGCGGTCACTGCACCCAGGCAGCAGCGGTCGCCGC
AGCAGGAGGAAGAAGAGGAGGAGGAGGGAGGGAGGGGGAGGGAGGGTCGA
CGGAACGGGGAAAGGCTGAGTGAGAGAGAGGGGAAAGAGAGGAGGAATGA
GGAGCAGGAGGGGGGGGAGGAGGAGGAGGAGGAGAAGGCCGTCAGGGGCC
CGAGCCGAGAGGGAGGGGATTTGCGCTTCCGGCGGTCAAACTTGTTTGCC
GTGGATAACATTCGgtaagggagggagggagggagggcgttacagatgcg
tgtgttggtctctcacttcttttgctgtacgccgcactcactcatcatac
atatctatagCGCCGATACCTCCATGCTCTCCAGCACCAGCTTCGCCTCC
CTCCTCTCCCTGGGAACGCAGCAGCGGCCCCTCCCCACCCACGCCCAGCT
GCTTTCCAATGTCGAGAAGATGGGCATCCACACACCCACCCTCATTCAGG
CTGCTGCCCTCCCTGCCCTCCTGGAAGgtaagcccgcttcttcggtccct
ccctcctcgttcttctcattctgcccccctccttctccttcatcgaaatg
cttgtctctcaccttttcccctccctcctcattcttctcattccaccttc
ctccttctcctgattcgaaatgcctgtctctcacctccctccctccctcc
ctccctccctccctccctccctccctccctccctccctccctccaccagG
CAAAGAAGCCATCCTCCATTCCTACACGGGCTCGGGCAAGACGTTGGCCT
ACCTCCTCCCCCTCCTCGCCCGGGTGGACCCCTTCCAATCGCACACGCAG
CTCCTCATTATTGCACCCTCCCGGGAGCTTGCGGCCCAGATCACCTCCGT
CGCGGATGAGgtatatatatatatatatatatatatatatatatatatat
atgcatatatatgcatatatatgcatatatatgcacagtcccattcctcc
ctgcttccttccctccttccctccccccccctcccatcctctcgtgtcac
tctttttcactcgtggctgacctacaccttcctccccccctctccctagC
TCACGGAAGGCACGGACATTAACGTTGCCGCTCTCATTGGCGGGGCCTCG
GCCGACCGCCAGGTGGAGAAACTGCGGTGGGAAAAGCCTCAAGTCCTCGT
CGgtacgtccctcccgccctccctctccccctgttccctcagcgttcact
ttactaactttcgtcttcctttccctccctccctccctcctcagGCACCC
CAGGCCGTGTGGCTGAGATGGTGCTCGAGAAACGGAAGGCCCGCATTGGG
CGTGCACACATgtacgtccgtttgttcctccctccttctctccctccctc
cttccttccctccctccccccctcaggctggtgcttgacgaggtggatat
gctgcccaatatgccgtggtaccacatcaaacatgacttccttccatccc
tccctccctcagGCTGGTGCTTGACGAGGTGGATATGCTGCTCGACGAGT
CGTATTACGGCGATATTCGCATGCTGGTGCAAGGCATGGGGGCACTTAGA
CAGgtagagtcaccgccttccctccctccctccctccctccctccctccc
tccctccctccctccctccctacgcctcgtcgaccaatagctaactttcc
ttttttcctactctactgcttttctctccccctccctccctccctctctc
cctccctccctccctccctccccgcagGCTGTCTTTGCCTCGGCCACGGG
TGCCTCTGAAAGTGTGCGGGACTTGGCATCCAACGTCATGGAGGGCCCGT
ACGAAACCATTTCCTCCTCCTCCTCCCCCTCCTCTTCCTCCTCGGCGGGG
CAAGAAGAGCAAGACGTAGGGGAGGAGgtgagtggatgcttccatccgtt
gcaagagaggaaagaaggtggtattactttctctccgtctcatctccctc
cctcccctccctccccccctccctccctccagCCCTCCTCCGCTCCCTTG
CTCCCCGCCTCCATCGAGCTCCCTGCCTCGCTACGTCACGGCATCCTCAT
CACTCCTCCCCAAAAGATACTCGACAATCTCCGACGCTTCCTGCACACCG
ACCCCGCTCCCGAGCTgtacggcccttcctccctccctcccttcctccct
ccctccctccctccctccctccccacatgcatttccgtcttgtgatcgtg
tacttggtcctcacctttcttccttacctccctctcactctcccttagCG
TCTTGGTCTTCGTGAACGATGCGTTAAAGGTGAACCGTATCGTGGAGGCC
CTCCAGGCCAAGGGCATTGACGCCGCCGGCATCTCAGGCGACAACAACAA
GCAGACACGCGCCAATACTCTAGgtatgtcctccctccctctctccctcc
ctccctcttttattttctcttgctccgtatttcacctttaaatttctctc
tccctccctccctcctttctttcctttctccctccctcccctcctatagG
TCGGCTGACGAGTGGGAAACTCCGTGTCTGCGTCACGACCGAGATGGCCG
CCCGAGGGATCGACATCCCTGGGCTTACGCATGTAGTGAACCTGGACGTG
CCGTCCTCCTTGGAGCAGTACGTGCACCGCGCGGGTCGTGCCGgtacgtg
ctccctcttccccccccccgtctctgtctgtcttcttgtggcttacaatg
catcccttttttccctgttttcctttcttttcccgccttgtttcgcatgg
cctcttgtgtgatttcttttagtgttttaaccttccctcccttcttccct
tcctcccttatttccccctcccttccccaagGCCGCGCCGGACGTCCGGG
TATCGTTTTGTCGTTCTCCCCTCCCTCCACCGCCTACGTCCTAGACAAGT
GGTCAAAGAAATTGCGAACCAAGCTGGAGCGTGTCGATATTGCCCATAGG
TAGTACCCTCCTTCTTTCATTCCCCCTGCCATGTTATACCTTCTTCCCTG
TCCACTGTTTATGTGGTTTATAGGGAAAGGAGTAATATGTGGTGTCTTCT
CACTCACTCACTCACCCGCCTCCTCTCCTTCCCTCTACCCCTCCTTCCTC
CCCCTGTACCTCACAGCCGCCTGATCCGGTATGATGAGAAGGACCTCCCA
GATGCCGCCCCGAAGCTGTCTCGTTCCGCCCAACGGAAGCTCGAGAGGAT
GCAAGGCCTCGGCGTGAAGCTGAAGCTGCCCGAGCTGCAAGAAGAGGAGG
GGGAGGAGGAAGCGATAGAGGGCGGGAAGGAGGAAGAGGAGTAGGGTGGA
GCGGTGAATCGGAAAAGGAAATGTACTCCAGAAATCTTCTCCTCCACAAA
AGTAAATAAAGCACA
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protein sequence of NO12G00170.3

>NO12G00170.3-protein ID=NO12G00170.3-protein|Name=NO12G00170.3|organism=Nannochloropsis oceanica|type=polypeptide|length=866bp
MDEHRPHYPQPHQKRLRRKMPAACGRGSVLLFSCLGAALLSASLSKSTTA
FVPLSLPPSSSSSLPQPSFFFVKGLRMSRVRLFFAGRPSRGGGGGGGRGG
GGGGRRKEGGREGGKEGEEKEDIVREWGENFGGKKKLFSTPTRGEEGGWE
EGEGGGGGRGRRINTDGRGGKKKGGGGGGGGGGGGGPMTPLSNVQLKKLS
KSGRQNPVLRMLLAKQPGLLDQSVEELEKELEVKFDKTIRKRGLEYYYAE
EDAEERARAEARLAPMGGEGGKAVRDGVMRREEDAPIEELTEEEMLSLGL
ELDGGEEEEDASDEPDDGTEITVEDNGVYPEDEDEEEGWREGGREGASVT
APAKGFTLRPPPSAVTAPRQQRSPQQEEEEEEEGGRGREGRRNGERLSER
EGKERRNEEQEGGEEEEEEKAVRGPSREGGDLRFRRSNLFAVDNIRADTS
MLSSTSFASLLSLGTQQRPLPTHAQLLSNVEKMGIHTPTLIQAAALPALL
EGKEAILHSYTGSGKTLAYLLPLLARVDPFQSHTQLLIIAPSRELAAQIT
SVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVL
EKRKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGMGALRQAVFASATG
ASESVRDLASNVMEGPYETISSSSSPSSSSSAGQEEQDVGEEPSSAPLLP
ASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNR
IVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGID
IPGLTHVVNLDVPSSLEQYVHRAGRAGTCSLFPPPVSVCLLVAYNASLFS
LFSFLFPPCFAWPLV*
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protein sequence of NO12G00170.2

>NO12G00170.2-protein ID=NO12G00170.2-protein|Name=NO12G00170.2|organism=Nannochloropsis oceanica|type=polypeptide|length=867bp
MDEHRPHYPQPHQKRLRRKMPAACGRGSVLLFSCLGAALLSASLSKSTTA
FVPLSLPPSSSSSLPQPSFFFVKGLRMSRVRLFFAGRPSRGGGGGGGRGG
GGGGRRKEGGREGGKEGEEKEDIVREWGENFGGKKKLFSTPTRGEEGGWE
EGEGGGGGRGRRINTDGRGGKKKGGGGGGGGGGGGGPMTPLSNVQLKKLS
KSGRQNPVLRMLLAKQPGLLDQSVEELEKELEVKFDKTIRKRGLEYYYAE
EDAEERARAEARLAPMGGEGGKAVRDGVMRREEDAPIEELTEEEMLSLGL
ELDGGEEEEDASDEPDDGTEITVEDNGVYPEDEDEEEGWREGGREGASVT
APAKGFTLRPPPSAVTAPRQQRSPQQEEEEEEEGGRGREGRRNGERLSER
EGKERRNEEQEGGEEEEEEKAVRGPSREGGDLRFRRSNLFAVDNIRADTS
MLSSTSFASLLSLGTQQRPLPTHAQLLSNVEKMGIHTPTLIQAAALPALL
EGKEAILHSYTGSGKTLAYLLPLLARVDPFQSHTQLLIIAPSRELAAQIT
SVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVL
EKRKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGMGALRQAVFASATG
ASESVRDLASNVMEGPYETISSSSSPSSSSSAGQEEQDVGEEPSSAPLLP
ASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNR
IVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGID
IPGLTHVVNLDVPSSLEQYVHRAGRAGRAGRPGIVLSFSPPSTAYVLDKW
SKKLRTKLERVDIAHR*
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protein sequence of NO12G00170.1

>NO12G00170.1-protein ID=NO12G00170.1-protein|Name=NO12G00170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=925bp
MDEHRPHYPQPHQKRLRRKMPAACGRGSVLLFSCLGAALLSASLSKSTTA
FVPLSLPPSSSSSLPQPSFFFVKGLRMSRVRLFFAGRPSRGGGGGGGRGG
GGGGRRKEGGREGGKEGEEKEDIVREWGENFGGKKKLFSTPTRGEEGGWE
EGEGGGGGRGRRINTDGRGGKKKGGGGGGGGGGGGGPMTPLSNVQLKKLS
KSGRQNPVLRMLLAKQPGLLDQSVEELEKELEVKFDKTIRKRGLEYYYAE
EDAEERARAEARLAPMGGEGGKAVRDGVMRREEDAPIEELTEEEMLSLGL
ELDGGEEEEDASDEPDDGTEITVEDNGVYPEDEDEEEGWREGGREGASVT
APAKGFTLRPPPSAVTAPRQQRSPQQEEEEEEEGGRGREGRRNGERLSER
EGKERRNEEQEGGEEEEEEKAVRGPSREGGDLRFRRSNLFAVDNIRADTS
MLSSTSFASLLSLGTQQRPLPTHAQLLSNVEKMGIHTPTLIQAAALPALL
EGKEAILHSYTGSGKTLAYLLPLLARVDPFQSHTQLLIIAPSRELAAQIT
SVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVL
EKRKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGMGALRQAVFASATG
ASESVRDLASNVMEGPYETISSSSSPSSSSSAGQEEQDVGEEPSSAPLLP
ASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNR
IVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGID
IPGLTHVVNLDVPSSLEQYVHRAGRAGRAGRPGIVLSFSPPSTAYVLDKW
SKKLRTKLERVDIAHSRLIRYDEKDLPDAAPKLSRSAQRKLERMQGLGVK
LKLPELQEEEGEEEAIEGGKEEEE*
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Synonyms
Publications