NO12G00170.1, NO12G00170.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G00170.1
Unique Name	NO12G00170.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2853
Alignment location	chr12:46647..52511 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:46647..52511 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO12G00170.1 vs.
Match: CEM05399.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 271.9 bits (694), Expect = 7.100e-69
Identity = 164/424 (38.68%), Postives = 237/424 (55.90%), Query Frame = 0

Query:  473 HAQLLSNVEKMGIHTPTLIQAAALPALLEGKEAILHSYTGSGKTLAYLLPLLAR----------------------VDPFQSHTQLLIIAPSRELAAQITSVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVLEKRKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGM-----GALRQAVFASATGASESVRDLASNVMEGPYETISSSSSPSSSSSAGQEEQDVGEEPSSAPLLPASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNRIVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGIDIPGLTHVVNLDVPSSLEQYVHRAGRAGRAGRPGIVLSFSPPSTAYVLDKWSKKLRTKLERVDIAHSRLI 870
            +A ++ N+ + GI  PT  Q  A+P +L+G + I+H++TGSGKTLAYLLPLL R                      V   +   +LLI+AP REL AQI  V   + EGT +  A L+GGA+   Q+E+L+   P+V+VGTPGR+ + VL++RK  + R   LVLDEVD L+ + Y G +  L+  +        RQ +FASATGA +SV   A   M   +  I            G +  D G      PL+P +I       H  +     K+ + LR+FLHTDP  + VL F N   +V  +V+ L  K I AA +SG  +K  RA    R+ +G++ + V+TE+ ARG+D+P L+HVVNLD+P+  E Y+HRAGR GRAG PG+V++F  P T +V+ K  K L   +  VD+   +++
Sbjct:  373 NAMMVENLRRGGILNPTHTQIKAIPRILQGDDLIIHAHTGSGKTLAYLLPLLERMLNEHGATAATNATDINGNRGGVQGRRRGPELLIVAPGRELVAQIAKVCRVVLEGTGLRCAMLLGGANPKYQLEQLKGG-PEVVVGTPGRLYDFVLDRRKVDLSRVKYLVLDEVDQLIRDPYEGQLESLMATIPKGTHSTHRQTIFASATGAQKSVTQAAKRYMRPVWHVI---------RPGGVKHSDEG-----VPLIPPNI------HHIFMCVREDKVTEALRKFLHTDPVDKRVLCFCNKQGRVKWLVDHLLQKQIIAAPLSGFTSKDDRAEVFKRMQNGQIGMAVSTELGARGLDVPWLSHVVNLDLPTDAEHYIHRAGRVGRAGNPGVVMNFVTPDTRFVIRKLEKALNIDIREVDLYEGKVM 775

The following BLAST results are available for this feature:

BLAST of NO12G00170.1 vs.

BLAST of NO12G00170.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
CEM05399.1	7.100e-69	38.68	unnamed protein product [Vitrella brassicaformis C...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO12G00170	NO12G00170	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO12G00170.1	NO12G00170.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO12G00170.1.cds1	NO12G00170.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00170.1.cds2	NO12G00170.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00170.1.cds3	NO12G00170.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00170.1.cds4	NO12G00170.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00170.1.cds5	NO12G00170.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00170.1.cds6	NO12G00170.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00170.1.cds7	NO12G00170.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00170.1.cds8	NO12G00170.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00170.1.cds9	NO12G00170.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00170.1.cds10	NO12G00170.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00170.1.cds11	NO12G00170.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00170.1.cds12	NO12G00170.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00170.1.cds13	NO12G00170.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00170.1.cds14	NO12G00170.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00170.1.cds15	NO12G00170.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00170.1.cds16	NO12G00170.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00170.1.cds17	NO12G00170.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr12:46647..52511-
coding sequence from alignment at chr12:46647..52511-

mRNA sequence

>NO12G00170.1 ID=NO12G00170.1|Name=NO12G00170.1|organism=Nannochloropsis oceanica|type=mRNA|length=2853bp
CAGGAACATGGATGAACACCGTCCGCATTATCCGCAACCGCACCAAAAGA
GACTACGAAGAAAAATGCCCGCAGCTTGTGGACGTGGGAGCGTGCTTCTT
TTCTCCTGCCTGGGCGCCGCCCTCCTCTCCGCCTCTCTCAGCAAGTCCAC
AACCGCCTTTGTTCCTCTCTCGCTCCCTCCCTCCTCGTCTTCCTCCCTCC
CTCAGCCTTCCTTCTTTTTTGTAAAGGGGCTAAGAATGAGTAGAGTCCGG
TTATTCTTTGCTGGCCGGCCGTCCCGAGGAGGAGGAGGAGGGGGAGGTAG
AGGAGGAGGAGGAGGGGGGAGAAGGAAGGAGGGGGGAAGGGAGGGAGGGA
AGGAGGGAGAGGAGAAGGAGGACATTGTCAGGGAGTGGGGAGAGAATTTT
GGGGGAAAGAAGAAACTGTTTTCGACTCCTACCAGGGGAGAGGAGGGAGG
GTGGGAGGAGGGGGAGGGAGGAGGGGGAGGGAGGGGGAGGAGGATAAACA
CAGATGGGAGGGGGGGGAAGAAGAAGGGAGGAGGAGGAGGCGGCGGCGGC
GGAGGAGGAGGAGGCCCGATGACGCCTTTGAGCAATGTCCAGCTGAAGAA
ACTCAGCAAGTCGGGGCGACAGAACCCTGTTCTACGCATGCTCCTGGCGA
AGCAGCCGGGCCTGTTGGATCAGTCGGTGGAGGAGCTCGAGAAGGAGCTC
GAAGTCAAGTTCGACAAGACCATCAGGAAGCGCGGGCTCGAGTACTACTA
CGCGGAAGAAGACGCCGAGGAGCGAGCCCGAGCCGAGGCCCGCCTGGCGC
CGATGGGGGGGGAGGGAGGAAAAGCCGTCAGAGACGGAGTGATGCGGAGG
GAAGAGGACGCGCCCATCGAGGAGCTGACGGAGGAGGAGATGCTGTCGCT
CGGCCTGGAGCTGGACGGGGGGGAGGAGGAGGAGGATGCCAGTGATGAGC
CGGATGACGGCACGGAGATCACCGTCGAGGACAACGGCGTATACCCCGAG
GACGAGGACGAGGAAGAGGGCTGGAGGGAGGGAGGGAGGGAGGGAGCTTC
CGTCACAGCCCCTGCGAAGGGTTTCACACTCCGTCCGCCTCCGTCTGCGG
TCACTGCACCCAGGCAGCAGCGGTCGCCGCAGCAGGAGGAAGAAGAGGAG
GAGGAGGGAGGGAGGGGGAGGGAGGGTCGACGGAACGGGGAAAGGCTGAG
TGAGAGAGAGGGGAAAGAGAGGAGGAATGAGGAGCAGGAGGGGGGGGAGG
AGGAGGAGGAGGAGAAGGCCGTCAGGGGCCCGAGCCGAGAGGGAGGGGAT
TTGCGCTTCCGGCGGTCAAACTTGTTTGCCGTGGATAACATTCGCGCCGA
TACCTCCATGCTCTCCAGCACCAGCTTCGCCTCCCTCCTCTCCCTGGGAA
CGCAGCAGCGGCCCCTCCCCACCCACGCCCAGCTGCTTTCCAATGTCGAG
AAGATGGGCATCCACACACCCACCCTCATTCAGGCTGCTGCCCTCCCTGC
CCTCCTGGAAGGCAAAGAAGCCATCCTCCATTCCTACACGGGCTCGGGCA
AGACGTTGGCCTACCTCCTCCCCCTCCTCGCCCGGGTGGACCCCTTCCAA
TCGCACACGCAGCTCCTCATTATTGCACCCTCCCGGGAGCTTGCGGCCCA
GATCACCTCCGTCGCGGATGAGCTCACGGAAGGCACGGACATTAACGTTG
CCGCTCTCATTGGCGGGGCCTCGGCCGACCGCCAGGTGGAGAAACTGCGG
TGGGAAAAGCCTCAAGTCCTCGTCGGCACCCCAGGCCGTGTGGCTGAGAT
GGTGCTCGAGAAACGGAAGGCCCGCATTGGGCGTGCACACATGCTGGTGC
TTGACGAGGTGGATATGCTGCTCGACGAGTCGTATTACGGCGATATTCGC
ATGCTGGTGCAAGGCATGGGGGCACTTAGACAGGCTGTCTTTGCCTCGGC
CACGGGTGCCTCTGAAAGTGTGCGGGACTTGGCATCCAACGTCATGGAGG
GCCCGTACGAAACCATTTCCTCCTCCTCCTCCCCCTCCTCTTCCTCCTCG
GCGGGGCAAGAAGAGCAAGACGTAGGGGAGGAGCCCTCCTCCGCTCCCTT
GCTCCCCGCCTCCATCGAGCTCCCTGCCTCGCTACGTCACGGCATCCTCA
TCACTCCTCCCCAAAAGATACTCGACAATCTCCGACGCTTCCTGCACACC
GACCCCGCTCCCGAGCTCGTCTTGGTCTTCGTGAACGATGCGTTAAAGGT
GAACCGTATCGTGGAGGCCCTCCAGGCCAAGGGCATTGACGCCGCCGGCA
TCTCAGGCGACAACAACAAGCAGACACGCGCCAATACTCTAGGTCGGCTG
ACGAGTGGGAAACTCCGTGTCTGCGTCACGACCGAGATGGCCGCCCGAGG
GATCGACATCCCTGGGCTTACGCATGTAGTGAACCTGGACGTGCCGTCCT
CCTTGGAGCAGTACGTGCACCGCGCGGGTCGTGCCGGCCGCGCCGGACGT
CCGGGTATCGTTTTGTCGTTCTCCCCTCCCTCCACCGCCTACGTCCTAGA
CAAGTGGTCAAAGAAATTGCGAACCAAGCTGGAGCGTGTCGATATTGCCC
ATAGCCGCCTGATCCGGTATGATGAGAAGGACCTCCCAGATGCCGCCCCG
AAGCTGTCTCGTTCCGCCCAACGGAAGCTCGAGAGGATGCAAGGCCTCGG
CGTGAAGCTGAAGCTGCCCGAGCTGCAAGAAGAGGAGGGGGAGGAGGAAG
CGATAGAGGGCGGGAAGGAGGAAGAGGAGTAGGGTGGAGCGGTGAATCGG
AAAAGGAAATGTACTCCAGAAATCTTCTCCTCCACAAAAGTAAATAAAGC
ACA

protein sequence of NO12G00170.1

>NO12G00170.1-protein ID=NO12G00170.1-protein|Name=NO12G00170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=925bp
MDEHRPHYPQPHQKRLRRKMPAACGRGSVLLFSCLGAALLSASLSKSTTA
FVPLSLPPSSSSSLPQPSFFFVKGLRMSRVRLFFAGRPSRGGGGGGGRGG
GGGGRRKEGGREGGKEGEEKEDIVREWGENFGGKKKLFSTPTRGEEGGWE
EGEGGGGGRGRRINTDGRGGKKKGGGGGGGGGGGGGPMTPLSNVQLKKLS
KSGRQNPVLRMLLAKQPGLLDQSVEELEKELEVKFDKTIRKRGLEYYYAE
EDAEERARAEARLAPMGGEGGKAVRDGVMRREEDAPIEELTEEEMLSLGL
ELDGGEEEEDASDEPDDGTEITVEDNGVYPEDEDEEEGWREGGREGASVT
APAKGFTLRPPPSAVTAPRQQRSPQQEEEEEEEGGRGREGRRNGERLSER
EGKERRNEEQEGGEEEEEEKAVRGPSREGGDLRFRRSNLFAVDNIRADTS
MLSSTSFASLLSLGTQQRPLPTHAQLLSNVEKMGIHTPTLIQAAALPALL
EGKEAILHSYTGSGKTLAYLLPLLARVDPFQSHTQLLIIAPSRELAAQIT
SVADELTEGTDINVAALIGGASADRQVEKLRWEKPQVLVGTPGRVAEMVL
EKRKARIGRAHMLVLDEVDMLLDESYYGDIRMLVQGMGALRQAVFASATG
ASESVRDLASNVMEGPYETISSSSSPSSSSSAGQEEQDVGEEPSSAPLLP
ASIELPASLRHGILITPPQKILDNLRRFLHTDPAPELVLVFVNDALKVNR
IVEALQAKGIDAAGISGDNNKQTRANTLGRLTSGKLRVCVTTEMAARGID
IPGLTHVVNLDVPSSLEQYVHRAGRAGRAGRPGIVLSFSPPSTAYVLDKW
SKKLRTKLERVDIAHSRLIRYDEKDLPDAAPKLSRSAQRKLERMQGLGVK
LKLPELQEEEGEEEAIEGGKEEEE*

mRNA from alignment at chr12:46647..52511-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO12G00170.1 ID=NO12G00170.1|Name=NO12G00170.1|organism=Nannochloropsis oceanica|type=mRNA|length=5865bp|location=Sequence derived from alignment at chr12:46647..52511- (Nannochloropsis oceanica)
CAGGAACATGGATGAACACCGTCCGCATTATCCGCAACCGCACCAAAAGA
GACTACGAAGAAAAATGCCCGCAGCTTGTGGACGTGGGAGCGTGCTTCTT
TTCTCCTGCCTGGGTGAGTCCTTCCCTCTTCATTGCTTTTGTCAAGGAGA
GGGATACCAACAGGGGGGCTTGTGCCATACCCTCCTTTTTGTCAGGATGT
TCTTACCTATCTAATTAATTGTACAAGGAAAATAATAAGATAGTAACAAT
GATAATAATAATCATAATCATAATAATAATCATAATCATAATAATAATAA
TAATCATAATCATAATTATGATTATGATTATTATTATTATTATAAATGAT
ATATTTACAAATAAATCAAAAACACACGACGGTGGTGATGTTCCATTCTG
CGATTCTGATTCAGAGCCCCCTTTCCTCTTTCCCCTCAAAAAGGGGGGAG
CATAAGGGGGGGGGGGCGCACGTGATCTCAGCATAACAATAAAGCAATCC
TTCGCCGGTAGCTCCTTCTGAACCGTCTTCTTGGGTTTATCCATGCATAT
GTAGAATATAGTCTCTTTTACATTTGTCTATTTTTTGAAAACAGTAGATC
TAAATATAGATTCGGCTGTTACGGTTTCAGAGCTTTAAACTCACACCTTA
CGGCCCTCCCTCTCCTTCCCTCCCTCCCTTCCTCCCTTCCTCAGGCGCCG
CCCTCCTCTCCGCCTCTCTCAGCAAGTCCACAACCGCCTTTGTTCCTCTC
TCGCTCCCTCCCTCCTCGTCTTCCTCCCTCCCTCAGCCTTCCTTCTTTTT
TGTAAAGGGGCTAAGAATGAGTAGAGTCCGGTTATTCTTTGCTGGCCGGC
CGTCCCGAGGAGGAGGAGGAGGGGGAGGTAGAGGAGGAGGAGGAGGGGGG
AGAAGGAAGGAGGGGGGAAGGGAGGGAGGGAAGGAGGGAGAGGAGAAGGA
GGACATTGTCAGGGAGTGGGGAGAGAATTTTGGGGGAAAGAAGAAACTGT
TTTCGACTCCTACCAGGGGAGAGGAGGGAGGGTGGGAGGAGGGGGAGGGA
GGAGGGGGAGGGAGGGGGAGGAGGATAAACACAGATGGGAGGGGGGGGAA
GAAGAAGGGAGGAGGAGGAGGCGGCGGCGGCGGAGGAGGAGGAGGCCCGA
TGACGCCTTTGAGCAATGTCCAGCTGAAGAAACTCAGCAAGTCGGGGCGA
CAGGTGGGGAGGGAGGGAGGGAGAGAGGGAGGGAAGGAAGGGATCCAGAA
CATGCTTGAGAGAGAGGTACTGCCTGAGACCATCCTCCGTCGTCGCTATC
CCTCTGACGACTCCTCCCTCCCTCCCCCTTCCCTCCCTCCCTCCCTCCCT
CCCTAGAACCCTGTTCTACGCATGCTCCTGGCGAAGCAGCCGGGCCTGTT
GGATCAGTCGGTGGAGGAGCTCGAGAAGGAGCTCGAAGTCAAGTTCGACA
AGACCATCAGGTGGGTGGGGGTACGCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCCCCTCCCTTCCTCCCCTCCTCCCTTCCTATCAGCCCAGAG
AGAGAATCTTCCCTCCCACCCATCCGCCTCCCCTCCTTCTTGCCCTCCCC
CTCTCTCGTCCAGCCTCATCTCCCTCCCTCCCTTCCCACGCCACGAAATT
CCGGTCCACATCCTCACTCCGGGGGACACCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCCAGGAAGCGCGGG
CTCGAGTACTACTACGCGGAAGAAGACGCCGAGGAGCGAGCCCGAGCCGA
GGCCCGCCTGGCGCCGATGGGGGGGGAGGGAGGAAAAGCCGTCAGAGACG
GAGTGATGCGGAGGGTGCGCAGGGAGGGAAGGAGGGAGGGAGGGAGGGAG
GGAGGGGGAGGGGTAGGGGGATGATGTTGATGGCAGGGGGGGAGGGGCGG
CTGTCAGAGATGGTGGGATGTGGATTGCATATCTTTCTCCCCTCCCTCCC
TCCCTCCTTCCCTCCCTTTTGGTGGCCATGTATCAATCCACGCTTCCCCT
CCCCTTCCCTTCCTCCCTCCCTTCCCTCTTTCTCCGCAGGAAGAGGACGC
GCCCATCGAGGAGCTGACGGAGGAGGAGATGCTGTCGCTCGGCCTGGAGC
TGGACGGGGGGGAGGAGGAGGAGGATGCCAGTGATGAGCCGGTAGGAAGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGCGAGCAGCAGCAGCCGCCGCA
GCACATGTCTGACAGCCAGCAGTCTAACCACCCTTCCCGCCCCCTCCCTC
CCTTCTTCCCTCCCTTCCTCAGGATGACGGCACGGAGATCACCGTCGAGG
ACAACGGCGTATACCCCGAGGACGAGGACGAGGAAGAGGGCTGGAGGGAG
GGAGGGAGGGAGGGAGCTTCCGTCACAGCCCCTGCGAAGGGTTTCACACT
CCGTCCGCCTCCGTCTGCGGTCACTGCACCCAGGCAGCAGCGGTCGCCGC
AGCAGGAGGAAGAAGAGGAGGAGGAGGGAGGGAGGGGGAGGGAGGGTCGA
CGGAACGGGGAAAGGCTGAGTGAGAGAGAGGGGAAAGAGAGGAGGAATGA
GGAGCAGGAGGGGGGGGAGGAGGAGGAGGAGGAGAAGGCCGTCAGGGGCC
CGAGCCGAGAGGGAGGGGATTTGCGCTTCCGGCGGTCAAACTTGTTTGCC
GTGGATAACATTCGGTAAGGGAGGGAGGGAGGGAGGGCGTTACAGATGCG
TGTGTTGGTCTCTCACTTCTTTTGCTGTACGCCGCACTCACTCATCATAC
ATATCTATAGCGCCGATACCTCCATGCTCTCCAGCACCAGCTTCGCCTCC
CTCCTCTCCCTGGGAACGCAGCAGCGGCCCCTCCCCACCCACGCCCAGCT
GCTTTCCAATGTCGAGAAGATGGGCATCCACACACCCACCCTCATTCAGG
CTGCTGCCCTCCCTGCCCTCCTGGAAGGTAAGCCCGCTTCTTCGGTCCCT
CCCTCCTCGTTCTTCTCATTCTGCCCCCCTCCTTCTCCTTCATCGAAATG
CTTGTCTCTCACCTTTTCCCCTCCCTCCTCATTCTTCTCATTCCACCTTC
CTCCTTCTCCTGATTCGAAATGCCTGTCTCTCACCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCACCAGG
CAAAGAAGCCATCCTCCATTCCTACACGGGCTCGGGCAAGACGTTGGCCT
ACCTCCTCCCCCTCCTCGCCCGGGTGGACCCCTTCCAATCGCACACGCAG
CTCCTCATTATTGCACCCTCCCGGGAGCTTGCGGCCCAGATCACCTCCGT
CGCGGATGAGGTATATATATATATATATATATATATATATATATATATAT
ATGCATATATATGCATATATATGCATATATATGCACAGTCCCATTCCTCC
CTGCTTCCTTCCCTCCTTCCCTCCCCCCCCCTCCCATCCTCTCGTGTCAC
TCTTTTTCACTCGTGGCTGACCTACACCTTCCTCCCCCCCTCTCCCTAGC
TCACGGAAGGCACGGACATTAACGTTGCCGCTCTCATTGGCGGGGCCTCG
GCCGACCGCCAGGTGGAGAAACTGCGGTGGGAAAAGCCTCAAGTCCTCGT
CGGTACGTCCCTCCCGCCCTCCCTCTCCCCCTGTTCCCTCAGCGTTCACT
TTACTAACTTTCGTCTTCCTTTCCCTCCCTCCCTCCCTCCTCAGGCACCC
CAGGCCGTGTGGCTGAGATGGTGCTCGAGAAACGGAAGGCCCGCATTGGG
CGTGCACACATGTACGTCCGTTTGTTCCTCCCTCCTTCTCTCCCTCCCTC
CTTCCTTCCCTCCCTCCCCCCCTCAGGCTGGTGCTTGACGAGGTGGATAT
GCTGCCCAATATGCCGTGGTACCACATCAAACATGACTTCCTTCCATCCC
TCCCTCCCTCAGGCTGGTGCTTGACGAGGTGGATATGCTGCTCGACGAGT
CGTATTACGGCGATATTCGCATGCTGGTGCAAGGCATGGGGGCACTTAGA
CAGGTAGAGTCACCGCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTACGCCTCGTCGACCAATAGCTAACTTTCC
TTTTTTCCTACTCTACTGCTTTTCTCTCCCCCTCCCTCCCTCCCTCTCTC
CCTCCCTCCCTCCCTCCCTCCCCGCAGGCTGTCTTTGCCTCGGCCACGGG
TGCCTCTGAAAGTGTGCGGGACTTGGCATCCAACGTCATGGAGGGCCCGT
ACGAAACCATTTCCTCCTCCTCCTCCCCCTCCTCTTCCTCCTCGGCGGGG
CAAGAAGAGCAAGACGTAGGGGAGGAGGTGAGTGGATGCTTCCATCCGTT
GCAAGAGAGGAAAGAAGGTGGTATTACTTTCTCTCCGTCTCATCTCCCTC
CCTCCCCTCCCTCCCCCCCTCCCTCCCTCCAGCCCTCCTCCGCTCCCTTG
CTCCCCGCCTCCATCGAGCTCCCTGCCTCGCTACGTCACGGCATCCTCAT
CACTCCTCCCCAAAAGATACTCGACAATCTCCGACGCTTCCTGCACACCG
ACCCCGCTCCCGAGCTGTACGGCCCTTCCTCCCTCCCTCCCTTCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCCACATGCATTTCCGTCTTGTGATCGTG
TACTTGGTCCTCACCTTTCTTCCTTACCTCCCTCTCACTCTCCCTTAGCG
TCTTGGTCTTCGTGAACGATGCGTTAAAGGTGAACCGTATCGTGGAGGCC
CTCCAGGCCAAGGGCATTGACGCCGCCGGCATCTCAGGCGACAACAACAA
GCAGACACGCGCCAATACTCTAGGTATGTCCTCCCTCCCTCTCTCCCTCC
CTCCCTCTTTTATTTTCTCTTGCTCCGTATTTCACCTTTAAATTTCTCTC
TCCCTCCCTCCCTCCTTTCTTTCCTTTCTCCCTCCCTCCCCTCCTATAGG
TCGGCTGACGAGTGGGAAACTCCGTGTCTGCGTCACGACCGAGATGGCCG
CCCGAGGGATCGACATCCCTGGGCTTACGCATGTAGTGAACCTGGACGTG
CCGTCCTCCTTGGAGCAGTACGTGCACCGCGCGGGTCGTGCCGGTACGTG
CTCCCTCTTCCCCCCCCCCGTCTCTGTCTGTCTTCTTGTGGCTTACAATG
CATCCCTTTTTTCCCTGTTTTCCTTTCTTTTCCCGCCTTGTTTCGCATGG
CCTCTTGTGTGATTTCTTTTAGTGTTTTAACCTTCCCTCCCTTCTTCCCT
TCCTCCCTTATTTCCCCCTCCCTTCCCCAAGGCCGCGCCGGACGTCCGGG
TATCGTTTTGTCGTTCTCCCCTCCCTCCACCGCCTACGTCCTAGACAAGT
GGTCAAAGAAATTGCGAACCAAGCTGGAGCGTGTCGATATTGCCCATAGG
TAGTACCCTCCTTCTTTCATTCCCCCTGCCATGTTATACCTTCTTCCCTG
TCCACTGTTTATGTGGTTTATAGGGAAAGGAGTAATATGTGGTGTCTTCT
CACTCACTCACTCACCCGCCTCCTCTCCTTCCCTCTACCCCTCCTTCCTC
CCCCTGTACCTCACAGCCGCCTGATCCGGTATGATGAGAAGGACCTCCCA
GATGCCGCCCCGAAGCTGTCTCGTTCCGCCCAACGGAAGCTCGAGAGGAT
GCAAGGCCTCGGCGTGAAGCTGAAGCTGCCCGAGCTGCAAGAAGAGGAGG
GGGAGGAGGAAGCGATAGAGGGCGGGAAGGAGGAAGAGGAGTAGGGTGGA
GCGGTGAATCGGAAAAGGAAATGTACTCCAGAAATCTTCTCCTCCACAAA
AGTAAATAAAGCACA

Coding sequence (CDS) from alignment at chr12:46647..52511-

>NO12G00170.1 ID=NO12G00170.1|Name=NO12G00170.1|organism=Nannochloropsis oceanica|type=CDS|length=2775bp|location=Sequence derived from alignment at chr12:46647..52511- (Nannochloropsis oceanica)
ATGGATGAACACCGTCCGCATTATCCGCAACCGCACCAAAAGAGACTACG
AAGAAAAATGCCCGCAGCTTGTGGACGTGGGAGCGTGCTTCTTTTCTCCT
GCCTGGGCGCCGCCCTCCTCTCCGCCTCTCTCAGCAAGTCCACAACCGCC
TTTGTTCCTCTCTCGCTCCCTCCCTCCTCGTCTTCCTCCCTCCCTCAGCC
TTCCTTCTTTTTTGTAAAGGGGCTAAGAATGAGTAGAGTCCGGTTATTCT
TTGCTGGCCGGCCGTCCCGAGGAGGAGGAGGAGGGGGAGGTAGAGGAGGA
GGAGGAGGGGGGAGAAGGAAGGAGGGGGGAAGGGAGGGAGGGAAGGAGGG
AGAGGAGAAGGAGGACATTGTCAGGGAGTGGGGAGAGAATTTTGGGGGAA
AGAAGAAACTGTTTTCGACTCCTACCAGGGGAGAGGAGGGAGGGTGGGAG
GAGGGGGAGGGAGGAGGGGGAGGGAGGGGGAGGAGGATAAACACAGATGG
GAGGGGGGGGAAGAAGAAGGGAGGAGGAGGAGGCGGCGGCGGCGGAGGAG
GAGGAGGCCCGATGACGCCTTTGAGCAATGTCCAGCTGAAGAAACTCAGC
AAGTCGGGGCGACAGAACCCTGTTCTACGCATGCTCCTGGCGAAGCAGCC
GGGCCTGTTGGATCAGTCGGTGGAGGAGCTCGAGAAGGAGCTCGAAGTCA
AGTTCGACAAGACCATCAGGAAGCGCGGGCTCGAGTACTACTACGCGGAA
GAAGACGCCGAGGAGCGAGCCCGAGCCGAGGCCCGCCTGGCGCCGATGGG
GGGGGAGGGAGGAAAAGCCGTCAGAGACGGAGTGATGCGGAGGGAAGAGG
ACGCGCCCATCGAGGAGCTGACGGAGGAGGAGATGCTGTCGCTCGGCCTG
GAGCTGGACGGGGGGGAGGAGGAGGAGGATGCCAGTGATGAGCCGGATGA
CGGCACGGAGATCACCGTCGAGGACAACGGCGTATACCCCGAGGACGAGG
ACGAGGAAGAGGGCTGGAGGGAGGGAGGGAGGGAGGGAGCTTCCGTCACA
GCCCCTGCGAAGGGTTTCACACTCCGTCCGCCTCCGTCTGCGGTCACTGC
ACCCAGGCAGCAGCGGTCGCCGCAGCAGGAGGAAGAAGAGGAGGAGGAGG
GAGGGAGGGGGAGGGAGGGTCGACGGAACGGGGAAAGGCTGAGTGAGAGA
GAGGGGAAAGAGAGGAGGAATGAGGAGCAGGAGGGGGGGGAGGAGGAGGA
GGAGGAGAAGGCCGTCAGGGGCCCGAGCCGAGAGGGAGGGGATTTGCGCT
TCCGGCGGTCAAACTTGTTTGCCGTGGATAACATTCGCGCCGATACCTCC
ATGCTCTCCAGCACCAGCTTCGCCTCCCTCCTCTCCCTGGGAACGCAGCA
GCGGCCCCTCCCCACCCACGCCCAGCTGCTTTCCAATGTCGAGAAGATGG
GCATCCACACACCCACCCTCATTCAGGCTGCTGCCCTCCCTGCCCTCCTG
GAAGGCAAAGAAGCCATCCTCCATTCCTACACGGGCTCGGGCAAGACGTT
GGCCTACCTCCTCCCCCTCCTCGCCCGGGTGGACCCCTTCCAATCGCACA
CGCAGCTCCTCATTATTGCACCCTCCCGGGAGCTTGCGGCCCAGATCACC
TCCGTCGCGGATGAGCTCACGGAAGGCACGGACATTAACGTTGCCGCTCT
CATTGGCGGGGCCTCGGCCGACCGCCAGGTGGAGAAACTGCGGTGGGAAA
AGCCTCAAGTCCTCGTCGGCACCCCAGGCCGTGTGGCTGAGATGGTGCTC
GAGAAACGGAAGGCCCGCATTGGGCGTGCACACATGCTGGTGCTTGACGA
GGTGGATATGCTGCTCGACGAGTCGTATTACGGCGATATTCGCATGCTGG
TGCAAGGCATGGGGGCACTTAGACAGGCTGTCTTTGCCTCGGCCACGGGT
GCCTCTGAAAGTGTGCGGGACTTGGCATCCAACGTCATGGAGGGCCCGTA
CGAAACCATTTCCTCCTCCTCCTCCCCCTCCTCTTCCTCCTCGGCGGGGC
AAGAAGAGCAAGACGTAGGGGAGGAGCCCTCCTCCGCTCCCTTGCTCCCC
GCCTCCATCGAGCTCCCTGCCTCGCTACGTCACGGCATCCTCATCACTCC
TCCCCAAAAGATACTCGACAATCTCCGACGCTTCCTGCACACCGACCCCG
CTCCCGAGCTCGTCTTGGTCTTCGTGAACGATGCGTTAAAGGTGAACCGT
ATCGTGGAGGCCCTCCAGGCCAAGGGCATTGACGCCGCCGGCATCTCAGG
CGACAACAACAAGCAGACACGCGCCAATACTCTAGGTCGGCTGACGAGTG
GGAAACTCCGTGTCTGCGTCACGACCGAGATGGCCGCCCGAGGGATCGAC
ATCCCTGGGCTTACGCATGTAGTGAACCTGGACGTGCCGTCCTCCTTGGA
GCAGTACGTGCACCGCGCGGGTCGTGCCGGCCGCGCCGGACGTCCGGGTA
TCGTTTTGTCGTTCTCCCCTCCCTCCACCGCCTACGTCCTAGACAAGTGG
TCAAAGAAATTGCGAACCAAGCTGGAGCGTGTCGATATTGCCCATAGCCG
CCTGATCCGGTATGATGAGAAGGACCTCCCAGATGCCGCCCCGAAGCTGT
CTCGTTCCGCCCAACGGAAGCTCGAGAGGATGCAAGGCCTCGGCGTGAAG
CTGAAGCTGCCCGAGCTGCAAGAAGAGGAGGGGGAGGAGGAAGCGATAGA
GGGCGGGAAGGAGGAAGAGGAGTAG

Synonyms

Publications