NO11G03010, NO11G03010 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO11G03010
Unique Name	NO11G03010
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1403
Alignment location	chr11:945326..946728 +

Link to JBrowse

Properties


Property Name	Value
Description	Short-chain dehydrogenase reductase sdr

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr11	genome	chr11:945326..946728 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036291	NAD(P)-bd_dom_sf
IPR002347	Glc/ribitol_DH

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Homology

[Close]

BLAST of NO11G03010 vs. NCBI_GenBank
Match: EWM24896.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 367.1 bits (941), Expect = 4.600e-98
Identity = 196/262 (74.81%), Postives = 218/262 (83.21%), Query Frame = 0

Query:    1 MVLSHVTALVTGAASGLGQATALRFLQQGARVVLADLPATKPAALASLQELDQDMRARGVFAGVDVLDSSLVSAGLDRASSQWGQTVNVVVNCAGIAVAQRVLGKKGPHSLEAFLKVLSVNAGGTFNVIRLAAERMSTQVPDSNGIRGVVVTTASIAAFDGQIGQAAYAASKAAVAGLTLPLARDLSRDGVRVVSIAPGLFKTPMLAALPEQVQKELGRTVPLPNRLGDPSEFAMLVQSIVENPMINGEVIRLDGALRMPPS 263
            M +  VTALVTGAASGLG ATA RFLQQGARV+LADLP    AALASLQ L+++ R+R VFAGVDVL+SSLV+AG+D A S WGQ+VNVVVNCAGIAVAQRVLGK+GPHSLE FLKV               ++RM     D NGIRGV++ TASIAA+DGQIGQ AYAASKAAVAGLTLPLARDL+RDG+RVVSIAPGLF+TPMLAALPE VQ ELG+TVPLP RLGDP EFAML Q++VENPMINGEVIRLDGALRMPPS
Sbjct:    1 MAMRRVTALVTGAASGLGNATAQRFLQQGARVILADLPTKNSAALASLQSLEEEERSRSVFAGVDVLESSLVAAGVDSALSNWGQSVNVVVNCAGIAVAQRVLGKQGPHSLETFLKVGR----------ETESKRMRKLPADENGIRGVIINTASIAAYDGQIGQTAYAASKAAVAGLTLPLARDLARDGIRVVSIAPGLFRTPMLAALPEHVQTELGQTVPLPKRLGDPMEFAMLAQAVVENPMINGEVIRLDGALRMPPS 252

[Close]

BLAST of NO11G03010 vs. NCBI_GenBank
Match: XP_008870894.1 (hypothetical protein H310_07300 [Aphanomyces invadans] >ETW00759.1 hypothetical protein H310_07300 [Aphanomyces invadans])

HSP 1 Score: 299.7 bits (766), Expect = 9.100e-78
Identity = 162/261 (62.07%), Postives = 196/261 (75.10%), Query Frame = 0

Query:    1 MVLSHVTALVTGAASGLGQATALRFLQQGARVVLADLPATKPAALASLQELDQDMRARGVFAGVDVLDSSLVSAGLDRASSQWGQTVNVVVNCAGIAVAQRVLGKKGPHSLEAFLKVLSVNAGGTFNVIRLAAERMSTQVPDSNGIRGVVVTTASIAAFDGQIGQAAYAASKAAVAGLTLPLARDLSRDGVRVVSIAPGLFKTPMLAALPEQVQKELGRTVPLPNRLGDPSEFAMLVQSIVENPMINGEVIRLDGALRMPP 262
            M L++  ALVTGAASGLG+ATA R ++ GA+V+L DLP +        Q + + +     F+  DV +   V+A LD A S +G++V++ VNCAGIAVA R + KKG H L  F  VL+VN  GTFNVIRLAAERMS    DS G RGV+V TASIAA+DGQIGQ AYAASKAA+ G+TLP+ARDLS  G+R+ +IAPGLF+TP+LA LPEQVQ ELG+TVP P+RLG P EFA LVQSIVEN M+NGEVIRLDGALRMPP
Sbjct:    1 MSLANRVALVTGAASGLGRATAERLVKAGAQVILCDLPTSDG------QNVARAIGPNAHFSPTDVTNEDQVTAALDLAESAFGKSVDIAVNCAGIAVAARTVSKKGAHPLYQFQNVLNVNVSGTFNVIRLAAERMSKSKGDSTGERGVIVNTASIAAYDGQIGQVAYAASKAAIVGMTLPIARDLSSSGIRINTIAPGLFRTPLLAGLPEQVQNELGQTVPFPSRLGKPEEFAQLVQSIVENRMLNGEVIRLDGALRMPP 255

[Close]

BLAST of NO11G03010 vs. NCBI_GenBank
Match: XP_008603854.1 (3-hydroxyacyl-CoA dehydrogenase type-2 [Saprolegnia diclina VS20] >EQC42431.1 3-hydroxyacyl-CoA dehydrogenase type-2 [Saprolegnia diclina VS20])

HSP 1 Score: 296.6 bits (758), Expect = 7.700e-77
Identity = 154/261 (59.00%), Postives = 198/261 (75.86%), Query Frame = 0

Query:    1 MVLSHVTALVTGAASGLGQATALRFLQQGARVVLADLPATKPAALASLQELDQDMRARGVFAGVDVLDSSLVSAGLDRASSQWGQTVNVVVNCAGIAVAQRVLGKKGPHSLEAFLKVLSVNAGGTFNVIRLAAERMSTQVPDSNGIRGVVVTTASIAAFDGQIGQAAYAASKAAVAGLTLPLARDLSRDGVRVVSIAPGLFKTPMLAALPEQVQKELGRTVPLPNRLGDPSEFAMLVQSIVENPMINGEVIRLDGALRMPP 262
            M L+   ALVTGAASGLG+ATA R L+QGA+V++ DLP +        QEL + +     F+  DV D   VSA LD A S +G+ +++ VNCAGIAVA + L KKGPH L  F +VL++N  GTFNVIRLAAERMS   P ++G RGV++ TASIAA++GQ+GQ AYAASK A+ G+TLP+AR+L++ G+R  +IAPGLF+TP+LA LP+ VQ++LG+TVP P+RLG P ++A LVQSIVEN MINGEVIR+DGALRMPP
Sbjct:    1 MTLARRVALVTGAASGLGRATAERLLKQGAQVIICDLPTSDG------QELARQLGPNCHFSPTDVTDEEQVSAALDLAESAFGKPIDIAVNCAGIAVAAKTLSKKGPHPLYQFQQVLNINTSGTFNVIRLAAERMSKTTPGADGERGVIINTASIAAYEGQVGQVAYAASKGAIVGITLPVARELAQYGIRCNTIAPGLFRTPLLAGLPDAVQEQLGKTVPFPSRLGHPEDYAQLVQSIVENKMINGEVIRIDGALRMPP 255

[Close]

BLAST of NO11G03010 vs. NCBI_GenBank
Match: XP_009826191.1 (hypothetical protein H257_03689 [Aphanomyces astaci] >ETV84499.1 hypothetical protein H257_03689 [Aphanomyces astaci])

HSP 1 Score: 296.2 bits (757), Expect = 1.000e-76
Identity = 160/261 (61.30%), Postives = 195/261 (74.71%), Query Frame = 0

Query:    1 MVLSHVTALVTGAASGLGQATALRFLQQGARVVLADLPATKPAALASLQELDQDMRARGVFAGVDVLDSSLVSAGLDRASSQWGQTVNVVVNCAGIAVAQRVLGKKGPHSLEAFLKVLSVNAGGTFNVIRLAAERMSTQVPDSNGIRGVVVTTASIAAFDGQIGQAAYAASKAAVAGLTLPLARDLSRDGVRVVSIAPGLFKTPMLAALPEQVQKELGRTVPLPNRLGDPSEFAMLVQSIVENPMINGEVIRLDGALRMPP 262
            M L++  ALVTGAASGLG+ATA R ++ GA+V+L DLP +        Q + +++     F+  DV     V+A LD A S +G++V++ VNCAGIAVA R + KKG H L  F  VL+VN  GTFNVIRLAAERMS    DS G RGV++ TASIAA+DGQIGQ AYAASKAA+ G+TLP+ARDLS  G+RV +IAPGLF+TP+LA LPEQVQ ELG TVP P+RLG P E+A LVQSI+EN M+NGEVIRLDGALRMPP
Sbjct:    1 MSLANRVALVTGAASGLGRATAERLVKAGAQVILCDLPTSDG------QNVARNIGPNAHFSPTDVTSEEEVTAALDLAESAFGKSVDIAVNCAGIAVAARTVSKKGAHPLYQFQNVLNVNVSGTFNVIRLAAERMSKTKGDSAGERGVIINTASIAAYDGQIGQVAYAASKAAIVGMTLPIARDLSTSGIRVNTIAPGLFRTPLLAGLPEQVQNELGLTVPFPSRLGKPEEYAQLVQSIIENRMLNGEVIRLDGALRMPP 255

[Close]

BLAST of NO11G03010 vs. NCBI_GenBank
Match: XP_012199486.1 (3-hydroxyacyl-CoA dehydrogenase type-2 [Saprolegnia parasitica CBS 223.65] >KDO29891.1 3-hydroxyacyl-CoA dehydrogenase type-2 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 295.8 bits (756), Expect = 1.300e-76
Identity = 155/261 (59.39%), Postives = 197/261 (75.48%), Query Frame = 0

Query:    1 MVLSHVTALVTGAASGLGQATALRFLQQGARVVLADLPATKPAALASLQELDQDMRARGVFAGVDVLDSSLVSAGLDRASSQWGQTVNVVVNCAGIAVAQRVLGKKGPHSLEAFLKVLSVNAGGTFNVIRLAAERMSTQVPDSNGIRGVVVTTASIAAFDGQIGQAAYAASKAAVAGLTLPLARDLSRDGVRVVSIAPGLFKTPMLAALPEQVQKELGRTVPLPNRLGDPSEFAMLVQSIVENPMINGEVIRLDGALRMPP 262
            M L+   ALVTGAASGLG+ATA R L+QGA+VV+ DLP +        QEL + +     F+  DV D   VSA LD A S +G+ +++ VNCAGIAVA + L KKGPH L  F +VL++N  GTFNVIRLAAERMS   P ++G RGV++ TASIAA++GQ+GQ AYAASK A+ G+TLP+AR+L+  G+R  +IAPGLF+TP+LA LP+ VQ++LG+TVP P+RLG P ++A LVQSIVEN MINGEVIR+DGALRMPP
Sbjct:    1 MALARRVALVTGAASGLGRATAERLLKQGAQVVICDLPTSDG------QELARQLGPNCHFSPTDVTDEEQVSAALDLAESAFGKPIDIAVNCAGIAVAAKTLSKKGPHPLYQFQQVLNINTSGTFNVIRLAAERMSKTTPGADGERGVIINTASIAAYEGQVGQVAYAASKGAIVGMTLPVARELAPYGIRCNTIAPGLFRTPLLAGLPDAVQEQLGKTVPFPSRLGHPEDYAQLVQSIVENKMINGEVIRIDGALRMPP 255

[Close]

BLAST of NO11G03010 vs. NCBI_GenBank
Match: OQR90629.1 (3-hydroxyacyl-CoA dehydrogenase [Achlya hypogyna])

HSP 1 Score: 295.0 bits (754), Expect = 2.200e-76
Identity = 155/261 (59.39%), Postives = 197/261 (75.48%), Query Frame = 0

Query:    1 MVLSHVTALVTGAASGLGQATALRFLQQGARVVLADLPATKPAALASLQELDQDMRARGVFAGVDVLDSSLVSAGLDRASSQWGQTVNVVVNCAGIAVAQRVLGKKGPHSLEAFLKVLSVNAGGTFNVIRLAAERMSTQVPDSNGIRGVVVTTASIAAFDGQIGQAAYAASKAAVAGLTLPLARDLSRDGVRVVSIAPGLFKTPMLAALPEQVQKELGRTVPLPNRLGDPSEFAMLVQSIVENPMINGEVIRLDGALRMPP 262
            M L+   ALVTGAASGLG+ATA R L+QGA+VV+ DLP ++       QEL + +     F+  DV D   V+A LD A S +G+ V++ VNCAGIAVA + L KKGPH L  F +VL++N  GTFNVIRLAAERMS   P ++G RGV++ TASIAA++GQ+GQ AYAASK A+ GLTLP+AR+L+  G+R  +IAPGLF+TP+LA LP+ VQ +LG+TVP P+RLG P ++A LVQSI+EN MINGEVIR+DGALRMPP
Sbjct:    1 MSLARRVALVTGAASGLGRATAERLLKQGAQVVICDLPTSEG------QELARQLGPNCHFSPTDVTDEEQVTAALDLAESAFGKPVDIAVNCAGIAVAAKTLSKKGPHPLYQFQQVLNINTSGTFNVIRLAAERMSKSAPGTDGERGVIINTASIAAYEGQVGQVAYAASKGAIVGLTLPVARELAPYGIRCNTIAPGLFRTPLLAGLPDAVQDQLGKTVPFPSRLGHPEDYAQLVQSIIENKMINGEVIRIDGALRMPP 255

[Close]

BLAST of NO11G03010 vs. NCBI_GenBank
Match: OQR81975.1 (3-hydroxyacyl-CoA dehydrogenase [Thraustotheca clavata])

HSP 1 Score: 294.3 bits (752), Expect = 3.800e-76
Identity = 156/261 (59.77%), Postives = 197/261 (75.48%), Query Frame = 0

Query:    1 MVLSHVTALVTGAASGLGQATALRFLQQGARVVLADLPATKPAALASLQELDQDMRARGVFAGVDVLDSSLVSAGLDRASSQWGQTVNVVVNCAGIAVAQRVLGKKGPHSLEAFLKVLSVNAGGTFNVIRLAAERMSTQVPDSNGIRGVVVTTASIAAFDGQIGQAAYAASKAAVAGLTLPLARDLSRDGVRVVSIAPGLFKTPMLAALPEQVQKELGRTVPLPNRLGDPSEFAMLVQSIVENPMINGEVIRLDGALRMPP 262
            M L+   ALVTGAASGLG+ATA R L+QGA+VV+ DLP ++       QEL + +     F+  DV     V+A LD A S +G++V++ VNCAGIAVA + L KKGPH L  F +VL+VN  GTFNVIRLAAERMS   P  +G RGV++ TASIAA++GQ+GQ AYAASK A+ G+TLP+AR+LS  G+R  +IAPGLF+TP+LA LP+ VQ +LG+TVP P+RLG+P ++A LVQSIVEN MINGEVIR+DGALRMPP
Sbjct:    1 MALASRVALVTGAASGLGRATAERLLKQGAQVVICDLPTSEG------QELARQLGPNCHFSPTDVTSEEQVTAALDLAESAFGKSVDIAVNCAGIAVAAKTLSKKGPHPLYQFQQVLNVNTSGTFNVIRLAAERMSKSAPGLDGERGVIINTASIAAYEGQVGQVAYAASKGAIVGMTLPVARELSPYGIRCNTIAPGLFRTPLLAGLPDAVQDQLGKTVPFPSRLGNPEDYAQLVQSIVENRMINGEVIRIDGALRMPP 255

[Close]

BLAST of NO11G03010 vs. NCBI_GenBank
Match: XP_008892186.1 (hypothetical protein PPTG_02703 [Phytophthora parasitica INRA-310] >ETI49610.1 hypothetical protein F443_06601 [Phytophthora parasitica P1569] >ETK89499.1 hypothetical protein L915_06474 [Phytophthora parasitica] >ETL42902.1 hypothetical protein L916_06419 [Phytophthora parasitica] >ETL96078.1 hypothetical protein L917_06284 [Phytophthora parasitica] >ETM49254.1 hypothetical protein L914_06394 [Phytophthora parasitica] >ETN22970.1 hypothetical protein PPTG_02703 [Phytophthora parasitica INRA-310] >ETO78326.1 hypothetical protein F444_06673 [Phytophthora parasitica P1976] >ETP19370.1 hypothetical protein F441_06611 [Phytophthora parasitica CJ01A1] >ETP47314.1 hypothetical protein F442_06645 [Phytophthora parasitica P10297] >KUF76703.1 3-hydroxyacyl-CoA dehydrogenase type-2 [Phytophthora nicotianae])

HSP 1 Score: 288.9 bits (738), Expect = 1.600e-74
Identity = 157/261 (60.15%), Postives = 194/261 (74.33%), Query Frame = 0

Query:    1 MVLSHVTALVTGAASGLGQATALRFLQQGARVVLADLPATKPAALASLQELDQDMRARGVFAGVDVLDSSLVSAGLDRASSQWGQTVNVVVNCAGIAVAQRVLGKKGPHSLEAFLKVLSVNAGGTFNVIRLAAERMSTQVPDSNGIRGVVVTTASIAAFDGQIGQAAYAASKAAVAGLTLPLARDLSRDGVRVVSIAPGLFKTPMLAALPEQVQKELGRTVPLPNRLGDPSEFAMLVQSIVENPMINGEVIRLDGALRMPP 262
            M L++  A+VTGAASGLG+ATA RF+Q GARVVL DLP +    +A      +++     F+  DV +   V+A LD A S +G+ VN VVNCAGIA+A + L KKG H L  F + ++VN  G+FNV RLAAERMS   P   G RGV++ TASIAA+DGQIGQAAYAASK A+ G+TLPLARDL+  G+RV +IAPGLF TP+LAALPE+VQK+LG TVP P+RLG+P E+A LV SI++N MINGE IRLDGALRMPP
Sbjct:    1 MSLANRIAIVTGAASGLGRATATRFVQNGARVVLCDLPTSDGVNVA------RELGVSCHFSPTDVTNEDDVTAALDLAESSFGEPVNTVVNCAGIALAIKTLSKKGVHQLFQFQQTINVNTVGSFNVARLAAERMSKTRPGPGGERGVIINTASIAAYDGQIGQAAYAASKGAIVGMTLPLARDLASYGIRVNTIAPGLFMTPLLAALPEKVQKQLGDTVPFPSRLGNPEEYAQLVHSIIDNKMINGETIRLDGALRMPP 255

[Close]

BLAST of NO11G03010 vs. NCBI_GenBank
Match: XP_009519003.1 (short-chain dehydrogenase/reductase SDR [Phytophthora sojae] >EGZ23715.1 short-chain dehydrogenase/reductase SDR [Phytophthora sojae])

HSP 1 Score: 285.8 bits (730), Expect = 1.400e-73
Identity = 153/261 (58.62%), Postives = 194/261 (74.33%), Query Frame = 0

Query:    1 MVLSHVTALVTGAASGLGQATALRFLQQGARVVLADLPATKPAALASLQELDQDMRARGVFAGVDVLDSSLVSAGLDRASSQWGQTVNVVVNCAGIAVAQRVLGKKGPHSLEAFLKVLSVNAGGTFNVIRLAAERMSTQVPDSNGIRGVVVTTASIAAFDGQIGQAAYAASKAAVAGLTLPLARDLSRDGVRVVSIAPGLFKTPMLAALPEQVQKELGRTVPLPNRLGDPSEFAMLVQSIVENPMINGEVIRLDGALRMPP 262
            M LS   A+VTGAASGLG+ATA RF+Q GARV+L DLP +    +A      +++     F+  DV +   V+A LD A S +G+ VN VVNCAGIA+A + L KKG H L  F + ++VN  G+FNV RLAAERMS   P + G RGV++ TASIAA+DGQIGQAAYAASK A+ G+TLPLARDL+  G+RV +IAPGLF TP+LAALPE++Q++LG +VP P+RLG+P E+A LV +I++N MINGE IRLDGALRMPP
Sbjct:    1 MALSSRIAIVTGAASGLGRATATRFVQNGARVILCDLPTSDGVNVA------RELGVSCHFSPTDVTNEDDVTAALDLAESSFGEPVNTVVNCAGIALAIKTLSKKGVHQLFQFQQTINVNTVGSFNVARLAAERMSKTRPGAGGERGVIINTASIAAYDGQIGQAAYAASKGAIVGMTLPLARDLASYGIRVNTIAPGLFMTPLLAALPEKMQQQLGESVPFPSRLGNPEEYAQLVHAIIDNKMINGETIRLDGALRMPP 255

[Close]

BLAST of NO11G03010 vs. NCBI_GenBank
Match: POM78658.1 (Short-chain dehydrogenase/reductase SDR [Phytophthora palmivora var. palmivora])

HSP 1 Score: 285.0 bits (728), Expect = 2.300e-73
Identity = 152/261 (58.24%), Postives = 192/261 (73.56%), Query Frame = 0

Query:    1 MVLSHVTALVTGAASGLGQATALRFLQQGARVVLADLPATKPAALASLQELDQDMRARGVFAGVDVLDSSLVSAGLDRASSQWGQTVNVVVNCAGIAVAQRVLGKKGPHSLEAFLKVLSVNAGGTFNVIRLAAERMSTQVPDSNGIRGVVVTTASIAAFDGQIGQAAYAASKAAVAGLTLPLARDLSRDGVRVVSIAPGLFKTPMLAALPEQVQKELGRTVPLPNRLGDPSEFAMLVQSIVENPMINGEVIRLDGALRMPP 262
            M L+   A+VTGAASGLG+ATA RF+Q GARV+L DLP +  A +A      +++     F+  DV +   V+A LD A S +G+ VN  VNCAGIA+A + L KKG H L  F + ++VN  G+FNV RLAAERMS   P   G RG+++ TASIAA+DGQIGQAAYAASK A+ G+TLPLARDL+  G+RV +IAPGLF TP+LA LPE++QK+LG +VP P+RLG+P E+A LV SI++N MINGE IRLDGALRMPP
Sbjct:    1 MALASRIAIVTGAASGLGRATATRFVQNGARVILCDLPTSDGAKVA------RELGTSCHFSPTDVTNEDDVTAALDLAESSFGEPVNTAVNCAGIALAIKTLSKKGVHQLFQFQQTINVNTVGSFNVARLAAERMSKTRPGPGGERGIIINTASIAAYDGQIGQAAYAASKGAIVGMTLPLARDLASYGIRVNTIAPGLFMTPLLAGLPEKMQKQLGESVPFPSRLGNPEEYAQLVHSIIDNKMINGETIRLDGALRMPP 255

The following BLAST results are available for this feature:

BLAST of NO11G03010 vs. NCBI_GenBank

BLAST of NO11G03010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM24896.1	4.600e-98	74.81	short-chain dehydrogenase reductase sdr [Nannochlo...	[more]
XP_008870894.1	9.100e-78	62.07	hypothetical protein H310_07300 [Aphanomyces invad...	[more]
XP_008603854.1	7.700e-77	59.00	3-hydroxyacyl-CoA dehydrogenase type-2 [Saprolegni...	[more]
XP_009826191.1	1.000e-76	61.30	hypothetical protein H257_03689 [Aphanomyces astac...	[more]
XP_012199486.1	1.300e-76	59.39	3-hydroxyacyl-CoA dehydrogenase type-2 [Saprolegni...	[more]
OQR90629.1	2.200e-76	59.39	3-hydroxyacyl-CoA dehydrogenase [Achlya hypogyna]	[more]
OQR81975.1	3.800e-76	59.77	3-hydroxyacyl-CoA dehydrogenase [Thraustotheca cla...	[more]
XP_008892186.1	1.600e-74	60.15	hypothetical protein PPTG_02703 [Phytophthora para...	[more]
XP_009519003.1	1.400e-73	58.62	short-chain dehydrogenase/reductase SDR [Phytophth...	[more]
POM78658.1	2.300e-73	58.24	Short-chain dehydrogenase/reductase SDR [Phytophth...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL115	nonsL115	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR010	ncniR010	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR018	ngnoR018	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK001951	NSK001951	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO11G03010.1	NO11G03010.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|591729	gene_5203	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100116g18	gene5585	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO11G03010.1	NO11G03010.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO11G03010 ID=NO11G03010|Name=NO11G03010|organism=Nannochloropsis oceanica|type=gene|length=1403bp
ATGGTGCTCAGTCACGTCACGGCCCTCGTCACCGGCGCGGCTTCGGGCCT
GGGCCAAGCCACAGCCCTGCGCTTCTTACAACAGgtaggcctcttttcca
cctggctccccttgtcctcctttcctcgctacatgctctgtacacacgac
acatggatccccctgaccccctatggttcctcagtcaagctcgaggggaa
actcactccaacctaccatgacaccaaaaagGGAGCTCGCGTTGTGCTGG
CAGATTTACCGGCCACCAAGCCTGCGGCATTGGCCTCTCTCCAAGAGCTT
GACCAGGACATGCGGGCTCGCGGCGTTTTCGCGGGAGTCGATgtatgtgt
tgggccggtgaaagtttgttgtgagcgtgcgtatgttgttcccctttcac
ctgctctctccatgccattgctatgcggatatccacaacccaaccacctc
ccaattctcttcgtcatcctccttcccccgcacctcctcatttcgtccat
cctttcccactgacagGTCCTCGACAGCTCCCTTGTCTCGGCGGGGCTGG
ATAGAGCTTCATCCCAATGGGGACAGACAGTAAATGTCGTGGTTAACTGC
GCAGGTATCGCCGTGGCCCAACGCGTACTTGGAAAGAAGGGGCCGCATTC
CTTAGAGGCTTTTCTCAAGgtcagtacaatggcggcggcaggagggagcg
gaggaagactttcagcgttacacacgcgcacacaagacaatgagaggtct
tgttttcatacttcatgatacttacctcttttcatcctcttccttctcat
cctcatccttctcctctccctcctcgttgcccactaaatgattttcttct
tttacctcctcctctggcgatagGTTTTGTCGGTGAATGCCGGAGGTACT
TTCAACGTCATCCGCCTCGCCGCAGAGAGgtaacgaccaagtctatctcg
cactccttccatcccaccctttctttcctcccccctaattcacctccttt
ccctccacattccccaagAATGAGCACTCAAGTCCCAGACAGCAACGGTA
TTCGCGGGGTCGTCGTTACCACGGCCAGCATCGCCGCCTTTGACGGTCAA
ATCGGCCAGGCTGCCTACGCCGCCTCCAAGGCCGCTGTTGCCGGTCTAAC
CCTCCCCCTTGCGCGTGATCTGTCTAGGGATGGCGTGAGGGTCGTCTCGA
TCGCGCCTGGATTATTCAAGACCCCAATGCTGGCAGCCCTGCCAGAACAG
GTCCAGAAAGAGCTAGGGAGAACTGTACCGTTGCCTAACAGGCTGGGGGA
TCCGTCGGAATTTGCAATGCTGGTGCAGTCTATCGTGGAGAATCCCATGA
TTAATGGGGAGGTGATCCGGTTGGATGGGGCGTTGCGGATGCCGCCATCT
TGA

protein sequence of NO11G03010.1

>NO11G03010.1-protein ID=NO11G03010.1-protein|Name=NO11G03010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=263bp
MVLSHVTALVTGAASGLGQATALRFLQQGARVVLADLPATKPAALASLQE
LDQDMRARGVFAGVDVLDSSLVSAGLDRASSQWGQTVNVVVNCAGIAVAQ
RVLGKKGPHSLEAFLKVLSVNAGGTFNVIRLAAERMSTQVPDSNGIRGVV
VTTASIAAFDGQIGQAAYAASKAAVAGLTLPLARDLSRDGVRVVSIAPGL
FKTPMLAALPEQVQKELGRTVPLPNRLGDPSEFAMLVQSIVENPMINGEV
IRLDGALRMPPS*

Synonyms

Publications