NO11G02910, NO11G02910 (gene) Nannochloropsis oceanica

Overview
NameNO11G02910
Unique NameNO11G02910
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length762
Alignment locationchr11:916260..917021 +

Link to JBrowse

Properties
Property NameValue
DescriptionRibulose-phosphate 3-epimerase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:916260..917021 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0005975carbohydrate metabolic process
GO:0006091generation of precursor metabolites and energy
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016857racemase and epimerase activity, acting on carbohydrates and derivatives
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR011060RibuloseP-bd_barrel
IPR000056Ribul_P_3_epim-like
Homology
[Close]
BLAST of NO11G02910 vs. NCBI_GenBank
Match: EWM24910.1 (ribulose-phosphate 3-epimerase [Nannochloropsis gaditana])

HSP 1 Score: 479.9 bits (1234), Expect = 4.700e-132
Identity = 234/251 (93.23%), Postives = 245/251 (97.61%), Query Frame = 0 
Query:    1 MATVTHGFVVPAPRTYSRGRIAMAAKKDFWIAPSILSADFAKLGQEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVDRIIPDFADAGASFITFHPEATNHIDRTLQLIKSKGCKAGLVFNPATPLTMAKHVLDKIDIILLMSVNPGFGGQSFIPETLVKLREARKMIDESGYDIRLEVDGGVGVANIKEIAEAGADFFVAGSAILKNPRTQDAYKGTIDQMRAELAKV 252
            +ATV HGFV P PR+Y+RGR+AMAAKKDFWIAPSILSADFAKLGQEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVDRIIPDFADAGASFITFHPEATNHIDRTLQLIKSKGCK+GLVFNPATPL++A+HVLDK+DIILLMSVNPGFGGQSFIPETL KL+EARKMIDESGYDIRLEVDGGVGVANIK+IAEAGADFFVAGSAILKNPRTQDAYK TID MRAELAKV
Sbjct:   15 LATVAHGFVPPVPRSYTRGRMAMAAKKDFWIAPSILSADFAKLGQEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVDRIIPDFADAGASFITFHPEATNHIDRTLQLIKSKGCKSGLVFNPATPLSLAQHVLDKVDIILLMSVNPGFGGQSFIPETLKKLKEARKMIDESGYDIRLEVDGGVGVANIKDIAEAGADFFVAGSAILKNPRTQDAYKATIDAMRAELAKV 265
[Close]
BLAST of NO11G02910 vs. NCBI_GenBank
Match: CBN76687.1 (ribulose-phosphate 3-epimerase [Ectocarpus siliculosus])

HSP 1 Score: 398.3 bits (1022), Expect = 1.800e-107
Identity = 201/256 (78.52%), Postives = 218/256 (85.16%), Query Frame = 0 
Query:    5 THGFVVP------APRTYSRGRIAMAA-----KKDFWIAPSILSADFAKLGQEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVDRIIPDFADAGASFITFHPEATNHIDRTLQLIKSKGCKAGLVFNPATPLTMAKHVLDKIDIILLMSVNPGFGGQSFIPETLVKLREARKMIDESGYDIRLEVDGGVGVANIKEIAEAGADFFVAGSAILKNPRTQDAYKGTIDQMRAELA 250
            +  FVVP      A   ++   + MAA     KKDFWIAPSILSAD AKLGQEVDN ++AGADIVHFDVMDNHYVPNLTIGP+VCK LRDHGVT PIDVHLMVSPVDRI+ DFA+AGASFITFHPEA+ H+DRTL LIKS GCKAGLVFNPATPL  AK+VLDK+DIILLMSVNPGFGGQSFIP TL KLREARKMIDESGYDIRLEVDGG GVANIKEIAEAGAD FVAGSAI  NPRT++ YK TID+MR+ELA
Sbjct:   16 SQAFVVPTATVSGASTRHTSSSLTMAAENAYHKKDFWIAPSILSADMAKLGQEVDNAMSAGADIVHFDVMDNHYVPNLTIGPLVCKGLRDHGVTNPIDVHLMVSPVDRIVGDFAEAGASFITFHPEASPHVDRTLGLIKSYGCKAGLVFNPATPLDHAKYVLDKVDIILLMSVNPGFGGQSFIPSTLDKLREARKMIDESGYDIRLEVDGGCGVANIKEIAEAGADMFVAGSAIFNNPRTEENYKETIDKMRSELA 271
[Close]
BLAST of NO11G02910 vs. NCBI_GenBank
Match: GAX15781.1 (ribulose-phosphate 3-epimerase [Fistulifera solaris])

HSP 1 Score: 374.4 bits (960), Expect = 2.800e-100
Identity = 182/227 (80.18%), Postives = 201/227 (88.55%), Query Frame = 0 
Query:   27 KDFWIAPSILSADFAKLGQEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVDRIIPDFADAGASFITFHPEATNHIDRTLQLIKSKGCKAGLVFNPATPLTMAKHVLDKIDIILLMSVNPGFGGQSFIPETLVKLREARKMIDESGYDIRLEVDGGVGVANIKEIAEAGADFFVAGSAILKNPRTQDAYKGTIDQMRAELAKVSK 254
            KD+ IAPSILSADFA+LG+EVDNVLAAGAD+VHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVD  I DF  AGAS+ITFHPEATNH+DR+LQLI++ GCKAGLVFNPAT L  AK+V+DK+DIILLMSVNPGFGGQ+FIP  L K REARK+IDE+G D RLE+DGGV V NI+E+AEAG D  VAGSAILK PRT +AYK TID MRAELAKV K
Sbjct:   37 KDYLIAPSILSADFARLGEEVDNVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVDAAITDFIAAGASYITFHPEATNHVDRSLQLIRNGGCKAGLVFNPATSLDAAKYVIDKLDIILLMSVNPGFGGQAFIPAVLDKAREARKLIDEAGIDCRLEIDGGVKVENIREVAEAGVDMMVAGSAILKEPRTMEAYKKTIDAMRAELAKVKK 263
[Close]
BLAST of NO11G02910 vs. NCBI_GenBank
Match: XP_005838001.1 (Ribulose-5-phosphate 3-epimerase protein, plastid-targeted [Guillardia theta CCMP2712] >EKX51021.1 Ribulose-5-phosphate 3-epimerase protein, plastid-targeted [Guillardia theta CCMP2712])

HSP 1 Score: 374.0 bits (959), Expect = 3.700e-100
Identity = 184/229 (80.35%), Postives = 201/229 (87.77%), Query Frame = 0 
Query:   27 KDFWIAPSILSADFAKLGQEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVDRIIPDFADAGASFITFHPEATNHIDRTLQLIKSKGCKAGLVFNPATPLTMAKHVLDKIDIILLMSVNPGFGGQSFIPETLVKLREARKMIDESGYDIRLEVDGGVGVANIKEIAEAGADFFVAGSAILKNPRTQDAYKGTIDQMRAEL--AKVSK 254
            KD+ IAPSILSADFAKLGQEVDNVLAAGAD+VHFDVMDNHYVPNLTIGPMVCKALR+HGVTAPIDVHLMV PVDRII DF DAGAS+ITFHPEA+NHIDRTL +I+  GCKAGLV NPAT L   K+V+DKIDIILLMSVNPGFGGQ FIP  L K +EARK+ID SGYDIRLE+DGGV V NIK++AE G D FVAGSAILK PRTQDAYK TID+MR +L  AKV+K
Sbjct:   49 KDYLIAPSILSADFAKLGQEVDNVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRNHGVTAPIDVHLMVQPVDRIIGDFIDAGASYITFHPEASNHIDRTLAMIRDGGCKAGLVLNPATSLDYCKYVMDKIDIILLMSVNPGFGGQKFIPSVLEKAKEARKLIDASGYDIRLEIDGGVTVDNIKQVAECGVDMFVAGSAILKEPRTQDAYKTTIDKMRQQLASAKVAK 277
[Close]
BLAST of NO11G02910 vs. NCBI_GenBank
Match: GAX16293.1 (ribulose-phosphate 3-epimerase [Fistulifera solaris])

HSP 1 Score: 374.0 bits (959), Expect = 3.700e-100
Identity = 182/227 (80.18%), Postives = 201/227 (88.55%), Query Frame = 0 
Query:   27 KDFWIAPSILSADFAKLGQEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVDRIIPDFADAGASFITFHPEATNHIDRTLQLIKSKGCKAGLVFNPATPLTMAKHVLDKIDIILLMSVNPGFGGQSFIPETLVKLREARKMIDESGYDIRLEVDGGVGVANIKEIAEAGADFFVAGSAILKNPRTQDAYKGTIDQMRAELAKVSK 254
            KD+ IAPSILSADFA+LG+EVDNVLAAGAD+VHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVD  I DF  AGAS+ITFHPEATNH+DR+LQLI++ GCKAGLVFNPAT L  AK+V+DK+DIILLMSVNPGFGGQ+FIP  L K REARK+IDE+G D RLE+DGGV V NI+E+AEAG D  VAGSAILK PRT +AYK TID MRAELAKV K
Sbjct:   37 KDYLIAPSILSADFARLGEEVDNVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVDAAITDFIAAGASYITFHPEATNHVDRSLQLIRNGGCKAGLVFNPATSLDAAKYVIDKLDIILLMSVNPGFGGQAFIPAVLDKAREARKLIDEAGIDCRLEIDGGVKVDNIREVAEAGVDMMVAGSAILKEPRTMEAYKETIDAMRAELAKVKK 263
[Close]
BLAST of NO11G02910 vs. NCBI_GenBank
Match: XP_009042015.1 (Ribulose-phosphate 3-epimerase [Aureococcus anophagefferens] >EGB03298.1 Ribulose-phosphate 3-epimerase [Aureococcus anophagefferens])

HSP 1 Score: 370.2 bits (949), Expect = 5.300e-99
Identity = 179/223 (80.27%), Postives = 199/223 (89.24%), Query Frame = 0 
Query:   27 KDFWIAPSILSADFAKLGQEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVDRIIPDFADAGASFITFHPEATNHIDRTLQLIKSKGCKAGLVFNPATPLTMAKHVLDKIDIILLMSVNPGFGGQSFIPETLVKLREARKMIDESGYDIRLEVDGGVGVANIKEIAEAGADFFVAGSAILKNPRTQDAYKGTIDQMRAELA 250
            KDF IAPSILSADFA+LG+EV N L+AGAD+VHFDVMDNHYVPNLTIGPMVC ALR HGVTAPIDVHLMVSPVDRI+ DFADAGAS+ITFHPEA+ H+DRTLQLI+  GCKAGLVFNPATPL + K+V+DK+DIILLMSVNPGFGGQSFIP TL K REARK+ID SGYDIRLE+DGGV  ANIKE+AEAG D FVAGSAI ++PRT++ YK TID MR ELA
Sbjct:    8 KDFLIAPSILSADFARLGEEVVNSLSAGADVVHFDVMDNHYVPNLTIGPMVCSALRKHGVTAPIDVHLMVSPVDRIVGDFADAGASYITFHPEASPHVDRTLQLIRGAGCKAGLVFNPATPLDILKYVMDKVDIILLMSVNPGFGGQSFIPATLDKAREARKLIDASGYDIRLEIDGGVSGANIKEVAEAGVDMFVAGSAIFRDPRTEEDYKVTIDAMRDELA 230
[Close]
BLAST of NO11G02910 vs. NCBI_GenBank
Match: XP_009041362.1 (hypothetical protein AURANDRAFT_69979 [Aureococcus anophagefferens] >EGB03938.1 hypothetical protein AURANDRAFT_69979 [Aureococcus anophagefferens])

HSP 1 Score: 370.2 bits (949), Expect = 5.300e-99
Identity = 179/223 (80.27%), Postives = 199/223 (89.24%), Query Frame = 0 
Query:   27 KDFWIAPSILSADFAKLGQEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVDRIIPDFADAGASFITFHPEATNHIDRTLQLIKSKGCKAGLVFNPATPLTMAKHVLDKIDIILLMSVNPGFGGQSFIPETLVKLREARKMIDESGYDIRLEVDGGVGVANIKEIAEAGADFFVAGSAILKNPRTQDAYKGTIDQMRAELA 250
            KDF IAPSILSADFA+LG+EV N L+AGAD+VHFDVMDNHYVPNLTIGPMVC ALR HGVTAPIDVHLMVSPVDRI+ DFADAGAS+ITFHPEA+ H+DRTLQLI+  GCKAGLVFNPATPL + K+V+DK+DIILLMSVNPGFGGQSFIP TL K REARK+ID SGYDIRLE+DGGV  ANIKE+AEAG D FVAGSAI ++PRT++ YK TID MR ELA
Sbjct:   43 KDFLIAPSILSADFARLGEEVVNSLSAGADVVHFDVMDNHYVPNLTIGPMVCSALRKHGVTAPIDVHLMVSPVDRIVGDFADAGASYITFHPEASPHVDRTLQLIRGAGCKAGLVFNPATPLDILKYVMDKVDIILLMSVNPGFGGQSFIPATLDKAREARKLIDASGYDIRLEIDGGVSGANIKEVAEAGVDMFVAGSAIFRDPRTEEDYKVTIDAMRDELA 265
[Close]
BLAST of NO11G02910 vs. NCBI_GenBank
Match: XP_002289051.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94487.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 369.8 bits (948), Expect = 6.900e-99
Identity = 182/227 (80.18%), Postives = 198/227 (87.22%), Query Frame = 0 
Query:   27 KDFWIAPSILSADFAKLGQEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVDRIIPDFADAGASFITFHPEATNHIDRTLQLIKSKGCKAGLVFNPATPLTMAKHVLDKIDIILLMSVNPGFGGQSFIPETLVKLREARKMIDESGYDIRLEVDGGVGVANIKEIAEAGADFFVAGSAILKNPRTQDAYKGTIDQMRAELAKVSK 254
            KD+ IAPSILSA+FAKLG+EVDN+L AGAD+VHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVD  I DF DAGAS+ITFHPEATNHIDR+LQLI++ GCKAGLVFNPAT L  A HV DK+DIILLMSVNPGFGGQ+FIP TL K R ARK IDE+G D RLE+DGGV V NIKE+AEAG D  VAGSAILK PRT++AYK TID MR ELAKV K
Sbjct:   37 KDYLIAPSILSANFAKLGEEVDNMLEAGADVVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVDAAIGDFIDAGASYITFHPEATNHIDRSLQLIRNGGCKAGLVFNPATSLDYAHHVKDKLDIILLMSVNPGFGGQAFIPATLDKARAARKFIDENGLDCRLEIDGGVKVDNIKEVAEAGVDMMVAGSAILKEPRTKEAYKVTIDAMREELAKVGK 263
[Close]
BLAST of NO11G02910 vs. NCBI_GenBank
Match: XP_002177037.1 (plastidic ribulose-phosphate 3-epimerase [Phaeodactylum tricornutum CCAP 1055/1] >EEC51500.1 plastidic ribulose-phosphate 3-epimerase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 367.9 bits (943), Expect = 2.600e-98
Identity = 179/224 (79.91%), Postives = 197/224 (87.95%), Query Frame = 0 
Query:   27 KDFWIAPSILSADFAKLGQEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVDRIIPDFADAGASFITFHPEATNHIDRTLQLIKSKGCKAGLVFNPATPLTMAKHVLDKIDIILLMSVNPGFGGQSFIPETLVKLREARKMIDESGYDIRLEVDGGVGVANIKEIAEAGADFFVAGSAILKNPRTQDAYKGTIDQMRAELAK 251
            KD+ IAPSILSADFA+LG+EVDNVL AGAD+VHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVD  I DF DAGAS+ITFHPEATNH+DR+LQLIK+ GCKAGLVFNPAT L  AK V+DK+DIILLMSVNPGFGGQ+FIP  L K REAR++ID++G D RLE+DGGV   NIKEI +AG D FVAGSAILK PRT +AYK TID MRAELAK
Sbjct:   37 KDYLIAPSILSADFARLGEEVDNVLEAGADVVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVDAAIQDFIDAGASYITFHPEATNHVDRSLQLIKNGGCKAGLVFNPATSLDAAKFVMDKLDIILLMSVNPGFGGQAFIPAVLDKAREARQLIDDAGIDCRLEIDGGVKTENIKEIKDAGVDMFVAGSAILKEPRTLEAYKETIDTMRAELAK 260
[Close]
BLAST of NO11G02910 vs. NCBI_GenBank
Match: XP_002295750.1 (ribulose-phosphate 3-epimerase, phosphoribulose epimerase, erythrose-4-phosphate isomerase, phosphoketopentose 3-epimerase, xylulose phosphate 3-epimerase, phosphoketopentose epimerase, ribulose 5-phosphate 3-epimerase, D-ribulose phosphate-3-epimerase, D-ribulose 5-phosphate epimerase, D-ribulose-5-P 3-epimerase, D-xylulose-5-phosphate 3-epimerase, pentose-5-phosphate 3-epimerase [Thalassiosira pseudonana CCMP1335] >ACI64467.1 ribulose-phosphate 3-epimerase, phosphoribulose epimerase, erythrose-4-phosphate isomerase, phosphoketopentose 3-epimerase, xylulose phosphate 3-epimerase, phosphoketopentose epimerase, ribulose 5-phosphate 3-epimerase, D-ribulose phosphate-3-epimerase, D-ribulose 5-phosphate epimerase, D-ribulose-5-P 3-epimerase, D-xylulose-5-phosphate 3-epimerase, pentose-5-phosphate 3-epimerase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 365.9 bits (938), Expect = 9.900e-98
Identity = 176/223 (78.92%), Postives = 196/223 (87.89%), Query Frame = 0 
Query:   31 IAPSILSADFAKLGQEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVDRIIPDFADAGASFITFHPEATNHIDRTLQLIKSKGCKAGLVFNPATPLTMAKHVLDKIDIILLMSVNPGFGGQSFIPETLVKLREARKMIDESGYDIRLEVDGGVGVANIKEIAEAGADFFVAGSAILKNPRTQDAYKGTIDQMRAELAKVSK 254
            IAPSILSADFA+LG+EV+NVL AGAD++HFDVMDNHYVPNLTIGPMVCKALRDHG+TAPIDVHLMVSPVD +I DF  AGAS ITFHPEATNHIDR+LQLIK+ GCKAGLVFNPATPL  AK+V+DK+DIILLMSVNPGFGGQ+FIP TL K REARKMIDE+G D RL +DGGV + NI+E+AEAG D  VAGSAI KNPRT D+YK TID MRAE+ K  K
Sbjct:   10 IAPSILSADFARLGEEVENVLKAGADVIHFDVMDNHYVPNLTIGPMVCKALRDHGITAPIDVHLMVSPVDSLITDFIAAGASHITFHPEATNHIDRSLQLIKNGGCKAGLVFNPATPLDAAKYVMDKLDIILLMSVNPGFGGQAFIPATLDKAREARKMIDEAGIDCRLMIDGGVKIDNIREVAEAGVDMMVAGSAIFKNPRTVDSYKSTIDAMRAEIEKAEK 232
The following BLAST results are available for this feature:
BLAST of NO11G02910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24910.14.700e-13293.23ribulose-phosphate 3-epimerase [Nannochloropsis ga... [more]
CBN76687.11.800e-10778.52ribulose-phosphate 3-epimerase [Ectocarpus silicul... [more]
GAX15781.12.800e-10080.18ribulose-phosphate 3-epimerase [Fistulifera solari... [more]
XP_005838001.13.700e-10080.35Ribulose-5-phosphate 3-epimerase protein, plastid-... [more]
GAX16293.13.700e-10080.18ribulose-phosphate 3-epimerase [Fistulifera solari... [more]
XP_009042015.15.300e-9980.27Ribulose-phosphate 3-epimerase [Aureococcus anopha... [more]
XP_009041362.15.300e-9980.27hypothetical protein AURANDRAFT_69979 [Aureococcus... [more]
XP_002289051.16.900e-9980.18predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_002177037.12.600e-9879.91plastidic ribulose-phosphate 3-epimerase [Phaeodac... [more]
XP_002295750.19.900e-9878.92ribulose-phosphate 3-epimerase, phosphoribulose ep... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL113nonsL113Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR022ngnoR022Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001954NSK001954Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G02910.1NO11G02910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591692gene_5191Nannochloropsis oceanica (N. oceanica CCMP1779)gene
RPEgene5582Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G02910.1NO11G02910.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G02910 ID=NO11G02910|Name=NO11G02910|organism=Nannochloropsis oceanica|type=gene|length=762bp
ATGGCCACGGTCACTCACGGCTTTGTTGTCCCGGCTCCCCGCACTTACTC
CCGCGGCCGCATCGCCATGGCTGCCAAGAAGGACTTCTGGATTGCGCCCT
CCATCCTCTCTGCTGACTTTGCCAAGCTTGGGCAAGAAGTGGACAACGTC
CTGGCCGCTGGTGCTGACATCGTGCACTTCGATGTGATGGACAACCACTA
CGTCCCCAACTTGACGATCGGCCCCATGGTCTGCAAGGCCCTGCGCGACC
ACGGCGTCACCGCCCCCATTGACGTGCACTTGATGGTTTCCCCCGTTGAC
CGTATCATCCCTGATTTTGCTGATGCCGGCGCTTCCTTCATCACCTTCCA
CCCGGAAGCTACCAACCACATTGACCGAACCCTGCAACTTATCAAGAGCA
AAGGGTGCAAGGCTGGCTTGGTCTTCAACCCCGCTACCCCCCTCACCATG
GCCAAGCACGTCCTGGACAAAATCGACATCATTCTTCTCATGTCTGTGAA
CCCCGGTTTTGGTGGGCAATCCTTCATTCCCGAAACCCTGGTCAAGCTGC
GTGAGGCCCGTAAAATGATCGACGAGTCCGGGTATGATATCCGCCTGGAG
GTCGATGGTGGGGTTGGCGTGGCCAACATCAAGGAGATTGCCGAAGCTGG
CGCTGATTTCTTTGTGGCGGGGAGTGCTATCTTGAAGAACCCCCGCACCC
AGGATGCCTACAAGGGGACGATTGACCAGATGCGTGCCGAGCTGGCGAAG
GTGAGCAAGTAG
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protein sequence of NO11G02910.1

>NO11G02910.1-protein ID=NO11G02910.1-protein|Name=NO11G02910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=254bp
MATVTHGFVVPAPRTYSRGRIAMAAKKDFWIAPSILSADFAKLGQEVDNV
LAAGADIVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVD
RIIPDFADAGASFITFHPEATNHIDRTLQLIKSKGCKAGLVFNPATPLTM
AKHVLDKIDIILLMSVNPGFGGQSFIPETLVKLREARKMIDESGYDIRLE
VDGGVGVANIKEIAEAGADFFVAGSAILKNPRTQDAYKGTIDQMRAELAK
VSK*
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Synonyms
Publications