NO11G02230, NO11G02230 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO11G02230 vs. NCBI_GenBank
Match: EWM24980.1 (hypothetical protein Naga_100122g13 [Nannochloropsis gaditana]) HSP 1 Score: 824.7 bits (2129), Expect = 5.300e-235 Identity = 739/1819 (40.63%), Postives = 900/1819 (49.48%), Query Frame = 0
Query: 1 MGRRQPQHPXXXXXXVTATHE--DRTAVNKTRASSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTV-------TKDMSIMSDSGSHSSTRGTGISP--SLSHLQPNYQLQQSFLHDGIGPSPRHCRVPMSLEETERCFWELIFTRHERLRLLLEDVLLSIGSRVRQMARIHCSTLFNDLVFVGLDPRQSLVGFHRTSRLSSFLGELERQAGPTPSITEVEAFMRDFRPDFLRYLRVPTRAQADSEYLLLGHGGLERGLDLKASACGVCYASHLTGGLPLHVSGLKYDSDVQELYGRLGEMLPQSKSDEVTLRLIFHDREEASAEVIVSGAWNGEDGRYEWTCKPSTAAGVRGVDSHMFDPAERLCQPQLADLGMFLPAVEIVMCTRGCPHSNVREVSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSTAPIKRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDLAPLP--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKSKPTKRYTCCAPGCVQSATFKPADEPRSKNNMVCVRHACKGMSCIKGPLCDHPDCVHEDISSVPRRATFGFPAERQRRCGKHKLNGMLYATELVKKRQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDYGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPPSSTIHSLLDGSGTPQSFSDLTNHPNHTVLLAALNDQASNDNFRLFLSRGNNGDMQYPLQPSPATXXXXXXXXXXXXXXMLMQSVPMLHQLQLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMRFDMLVEAASXXXXXESD---------------------------GRQGTAL-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGVWSELGSPTLGVGMGMGGMEDAFGRFPLTGTTPKSHHHPMHLTCLGEQELQHQVAE--------EQAQRAEKIIS-RSAWASDIAVVLVSRLSQHAVAGGAASPRKGRGVEPEDEGVYFVKNVT-----PDGKQDPKGSLRELHRVADHIQVLSGSS-SSVPQQMISTLGG--GRKAGGQPSVLLDQYAHTLGLSRDAYTQEDVEVEGVLEGRTRPAQCLMVGWNPTGPGNLAVGEGGMLEVKFPHRPSGTLTLSEGQAALVMRPLGSGTGAWMEMTLNEFARQGQRLCTGDLLALLVGAVMKARRDAVLVS--------RKDGE------------GVSYDPDQCLSNPGYDLPLEVLEGPLTALVSDPRAAFKVASFFLGGRVDEQGRARFTPAAFVHFCNCFMASQDLFGTAFKVWEDLGSLPSGVEFR-RFEGQME------------------GGKGCFLHLSDVAPCMVLDWYSTEQTSSRSSPASPPPAPRPKGLLLRWADGGSEGRLVWEVEEPQLKALLTEQATVLGLDPTSLSGLVTAAQELRNGIGEKAGQFNEILIAVGKQQASRRYIG 1711
MGRRQPQHP A + ++ NK RASSRG + K++S+ +GS G SP L + + ++LH+ + SPRH R + E+TERCFWEL+FTRH+RLR LLEDV LS GSR RQMARIHC+TL NDLVFVGLD ++++ FHRT RL++FL ELE + GP PS+T VE F+R+ RPDF YL P + + D+EY+LLG G +R L+L+AS C CYA+HLT GL + V+GLKY+SD+QELY RL +++PQ KS +VTLRL+FHD +A AEV V+ WN E+GR EW C P AAG VD H+FDP + LC PQLADLGMFLP E+V+CTR C HS + + ++ R TA K+ DLAPLP GKSKPTKRYTCCAPGC+QSATFKPADEPRSKNNMVCVRHA KGMSCIKGPLCDHPDCVHE++S+VPRRATFGFPAERQRRCGKHKL GMLYATELVKKR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX F XXXXXXXXXXXXXXXXXXXXXXXXXXXXX HF GPPS I+ LLDG G PQSFSDL NHP +V LAAL +QA N+ FR F+S+G++GDM +P+QPSP XXXXXXXXXXX MLM S PML LP +RFDMLVEAA+ D + GT L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D W +LGSP+ G+ +GGME+AFGR P GTTPK++ MHL LG + +Q A E R++ RS WA D+AVV+V R Q +++ G AS K G EP DEG+YFVKNVT K D + RELHR++D + S+ S Q++ST+ G G Q S +DQ+ LGL DAY E +E GR RPA+ L++ W+P+G G ++V+F +R S L ++E +V+RPLG TG W+E L +FARQG C DL+AL++GA + RRDA L S K+G SY+ D CLS P +DLPL+VLEGPLTALVSDP AAF V S FL RV QG RFTPA+F+HFCNCF++++D FGTAF+VW ++ S+PS VEFR GQ + G+ CFLHLSD AP ++L+W R++ P + KG++L W D G + RL WEV+EP+L+ LLT A LG DPT+L+GL AAQ+L G GEK+G+F E ++ +G++Q SR+YIG
Sbjct: 1 MGRRQPQHPPAPTAQAVAATRAVEESSGNKPRASSRGPTPTVLTTNYTGSSGTASISRKRNTNAIGGIEGVAGGTQKNLSVSIMNGSED---GADASPRFMLDSKRHAFFPSDAYLHESLRSSPRHNRRLIRFEDTERCFWELVFTRHDRLRHLLEDVCLSSGSRARQMARIHCATLVNDLVFVGLDVHENVLAFHRTERLTAFLEELEGRVGPNPSVTAVEEFVRNCRPDFSPYLCAPPQEKGDAEYVLLGERGSDRWLELRASVCADCYATHLTNGLAVDVTGLKYNSDIQELYARLEDLVPQCKSADVTLRLLFHDGADALAEVTVARGWNREEGRQEWVCVPRYAAGGTRVDPHIFDPGDTLCLPQLADLGMFLPTTEVVICTRNCLHSTLGKAAS---------------------------------------------------PTGTGSILAPRAHDDFPYAASSLEKSLGIPQGNPPGSISKPPKRTPSNKRVTAKPKKPGSTGENDGYGP-------------------------DLAPLPPLTKVSSLFPSDCPQTSLDAFPFPEIEPGPVHFAGGGGGKTGKSKPTKRYTCCAPGCLQSATFKPADEPRSKNNMVCVRHARKGMSCIKGPLCDHPDCVHEEVSTVPRRATFGFPAERQRRCGKHKLAGMLYATELVKKRHASAQKRNGGTPGAKKKAPGLTTKSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVAATEDDREDDF--------------------------------------------LPKPSKRRRNAPSPTAAASPKVASGADRKHDEPTNSAFPSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPPLTDDAQQQMQAQDHPQHHGYMYPSNHF----------------------------------QTLSQQGPPS--INHLLDG-GAPQSFSDLANHP--SVSLAALGEQA-NEAFRFFMSKGSSGDMNFPVQPSPXXXXXXXXXXXXXPPHMLMPSAPMLQ--PLPPGAMPSYPPQLSSPSREAATTATESGADAQQDQAVRFDMLVEAAASGKGRAKDQKAGERPNVYLSSEQGMETQSQPTQLHSQYGTHLLNRQSAYSIQHQQPQETMQNQHQQHEGSPPSHDALGLTQSRALYQAPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHLSHVQVDYGWGDLGSPS--PGLCLGGMEEAFGRSPYGGTTPKAYQQLMHLVSLG-GDYSNQTANTGSGGMGGELDMRSKYDHGLRSVWAGDVAVVIVLRSPQGSLS-GLASLTKDVGFEPADEGIYFVKNVTTCDQSARNKGDRECFRRELHRLSDCLLPAPASNFQSAQSQLVSTVSGRTGTAKESQLSFYIDQHKQALGLGEDAYLSEQMETG---MGRKRPARRLILTWDPSG--------GAEIDVEFSNR-SDRLKVTEIDGNVVLRPLGP-TGPWLENALTDFARQGLAFCAADLMALVLGAA-RIRRDAKLSSLGGKTAFPSKEGAQKEPDESLIREVEASYNLDGCLS-PQFDLPLDVLEGPLTALVSDPSAAFYVVSNFLTIRVGAQGCPRFTPASFIHFCNCFLSNRDPFGTAFRVWCEVTSVPS-VEFRPNQSGQADEPVSAPSQVRRAATSSTSTGQDCFLHLSDEAPGLILNW-----CFPRTTLELPAKSGTAKGVVLGWNDRGRDSRLTWEVQEPRLQTLLTSHARSLGFDPTTLAGLAGAAQDLTKGCGEKSGKFMETILEIGQKQPSRKYIG 1629 The following BLAST results are available for this feature:
BLAST of NO11G02230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 1
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G02230 ID=NO11G02230|Name=NO11G02230|organism=Nannochloropsis oceanica|type=gene|length=5800bpback to top protein sequence of NO11G02230.1 >NO11G02230.1-protein ID=NO11G02230.1-protein|Name=NO11G02230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1715bpback to top Synonyms
Publications
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