NO11G02220, NO11G02220 (gene) Nannochloropsis oceanica

Overview
NameNO11G02220
Unique NameNO11G02220
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3538
Alignment locationchr11:714587..718124 +

Link to JBrowse

Properties
Property NameValue
DescriptionZinc finger, HIT-type
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:714587..718124 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005534galactose binding
GO:0004335galactokinase activity
GO:0005524ATP binding
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0046835carbohydrate phosphorylation
GO:0006012galactose metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR020568Ribosomal_S5_D2-typ_fold
IPR007529Znf_HIT
IPR006204GHMP_kinase_N_dom
IPR019539GalKase_gal-bd
IPR000705Galactokinase
Homology
BLAST of NO11G02220 vs. NCBI_GenBank
Match: EWM24992.1 (Zinc finger, HIT-type [Nannochloropsis gaditana])

HSP 1 Score: 300.1 bits (767), Expect = 2.300e-77
Identity = 201/526 (38.21%), Postives = 257/526 (48.86%), Query Frame = 0
Query:  344 MVSLNIVRKTRPGSFFVTKTDVL--PRDEDEAGAGLLIRGPMRRVCLVCKSKASAYACPRCATPYCSSICYKGHNQGCTEGFYRQHVEKEILLRQAEXXXXXXXXXXXXXXXRQAVVDALRRVHLKQQEPNQAWSEMEDDRLEELWARGDALDLEALTPEEQRAFRAAIASGELGKDVEVWTPWWCQGGMSMQSNPFVVVEGEVEGA------GEAVAAPGDEPEKEWSGQVDFGSLYQGLQYEKTKAETMXXXXXXXXXXXXXXXXXXXFLKYHLLDLLFAYAAVLRTYNGCWNVAPEEAAEDLLALSPVLQQXXXXXXXXXXXXXXXXXXXXXXT--ALRQWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVTVLLARRVKTQAALLDARRMVHAALAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRLLQLWHKLRYFFLWACR-NGEEREEEL----RELRIEFARALREHQVV 855
            M SL+IV+KT PG   V KTD+L  P D  ++   +L+RGP RR+CLVCKSK+SAYACPRC+TPYCS++CYKGHNQ CTEGFYR HVE+ I LRQAE               ++A ++ALRRV L+  E     S +  DRLEELWAR D+LDLEALT EEQRAF A++A+G+L +D+E+WTPWW QGG+S    P V VE +  G+      G    A  D P       +DF SL++ LQ  K +                        L YHLLD+LFAY  VLRTYNG   + PE+AA+DLLALSPVL+                       +  ALR+W                                         DV +LL  +VKTQAAL+DA R++ AAL E                                                              KR L+ WHKLR+F  W+C  +GE  E+      R  R +F +AL EH+++
Sbjct:    1 MASLHIVKKTLPGKVSVRKTDLLPCPADSFKSEDNVLLRGPTRRICLVCKSKSSAYACPRCSTPYCSAVCYKGHNQECTEGFYRHHVEEVIRLRQAE--EVGAGIPPGGKAAKRATINALRRVRLQTDETEAFCSGVGGDRLEELWARKDSLDLEALTREEQRAFLASVANGDLSRDIEIWTPWWTQGGVSEGGQPLVRVERDGLGSDGGNSKGGKGGATSDRP-------IDFTSLHEELQRLKKR-------MGFPVLRPFLTSSVSPHLPYHLLDILFAYTCVLRTYNGACGLVPEDAADDLLALSPVLRYRLRTGAEAGLVRLESARGALASSLEALRRW--------------QLLQGPAPCASSTGMSSSLAMGLAAGRDVVLLLEHKVKTQAALVDACRLMRAALRE-------ALAQGAPKEEIEGQEKPGGEVDELHSLTEKLRQLASGKTAEDLGKEGRAKARHGGKRWLRAWHKLRFFLEWSCSWDGEHHEDGQEVVGRAFRTKFEQALHEHELL 489          
BLAST of NO11G02220 vs. NCBI_GenBank
Match: XP_005855199.1 (hit zinc finger family protein, partial [Nannochloropsis gaditana CCMP526] >EKU21159.1 hit zinc finger family protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 298.9 bits (764), Expect = 5.100e-77
Identity = 201/526 (38.21%), Postives = 256/526 (48.67%), Query Frame = 0
Query:  344 MVSLNIVRKTRPGSFFVTKTDVL--PRDEDEAGAGLLIRGPMRRVCLVCKSKASAYACPRCATPYCSSICYKGHNQGCTEGFYRQHVEKEILLRQAEXXXXXXXXXXXXXXXRQAVVDALRRVHLKQQEPNQAWSEMEDDRLEELWARGDALDLEALTPEEQRAFRAAIASGELGKDVEVWTPWWCQGGMSMQSNPFVVVEGEVEGA------GEAVAAPGDEPEKEWSGQVDFGSLYQGLQYEKTKAETMXXXXXXXXXXXXXXXXXXXFLKYHLLDLLFAYAAVLRTYNGCWNVAPEEAAEDLLALSPVLQQXXXXXXXXXXXXXXXXXXXXXXT--ALRQWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVTVLLARRVKTQAALLDARRMVHAALAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRLLQLWHKLRYFFLWACR-NGEEREEEL----RELRIEFARALREHQVV 855
            M SL+IV+KT PG   V KTD+L  P D  ++   +L+RGP RR+CLVCKSK+SAYACPRC+TPYCS++CYKGHNQ CTEGFYR HVE+ I LRQAE               + A ++ALRRV L+  E     S +  DRLEELWAR D+LDLEALT EEQRAF A++A+G+L +D+E+WTPWW QGG+S    P V VE +  G+      G    A  D P       +DF SL++ LQ  K +                        L YHLLD+LFAY  VLRTYNG   + PE+AA+DLLALSPVL+                       +  ALR+W                                         DV +LL  +VKTQAAL+DA R++ AAL E                                                              KR L+ WHKLR+F  W+C  +GE  E+      R  R +F +AL EH+++
Sbjct:    7 MASLHIVKKTLPGKVSVRKTDLLPCPADSFKSEDNVLLRGPTRRICLVCKSKSSAYACPRCSTPYCSAVCYKGHNQECTEGFYRHHVEEVIRLRQAE--EVGAGIPPGGKAAKLATINALRRVRLQADETEAFCSGVGGDRLEELWARKDSLDLEALTREEQRAFLASVANGDLSRDIEIWTPWWTQGGVSEGGQPLVRVERDGLGSDGGNSQGGKGGATSDRP-------IDFTSLHEELQRLKKR-------MGFPVQRPFLTSSVSPHLPYHLLDILFAYTCVLRTYNGACGLVPEDAADDLLALSPVLRYRLRTGAEAGLVRLESARGALASSLEALRRW--------------QLLQGPAPCASSTGMSSSLAMGLAAGRDVVLLLEHKVKTQAALVDACRLMRAALRE-------ALAQGAPKAEIEGQEKPGGEVDELHSLTEKLRQLASGKTAEDLGKEGRAKARHGGKRWLRAWHKLRFFLEWSCSWDGEHHEDGQEVVGRAFRTKFEQALHEHELL 495          
BLAST of NO11G02220 vs. NCBI_GenBank
Match: POM71118.1 (Galactokinase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 184.5 bits (467), Expect = 1.400e-42
Identity = 116/270 (42.96%), Postives = 158/270 (58.52%), Query Frame = 0
Query:   44 PRLAVVQAPGRVNLIGEHIDYSGYSVLPTALDDYTAMIAIGANPSRSHDGVKVLNLDRAKFPETRYLSLT-------SPTFMSDAPHDWISYVECALQGVR----RQFSGDIDETKLNGLVLVVQGTVPPAAGLSSSSALVVAAALAFCWSV---GKGDIRKVTLAALCVECERLVGTAGGGMDQTVSCLAEPRKALLIDFE---PGLKAMAVP-LPPGIVIVVADSEVASEKAVSATTQFNRRVVECQLATWMLAKSAGFENWSSFETL 296
            P + V +APGRVNLIGEH+DY GY+VLP A++  +  +A     S S +GVKVL++  AK P+ + ++L+       +   +      W  YV C + G+R      F G++ E K     L+V G +P   GLSSSSALVVAAALA   ++   G+  +R+  LA LC   E  VGT GGGMDQ V+CLA+   A+ +DF       K + VP    G+  VVA+S V +EKAV A T+FN+RVVEC LA  ++AK AG E+W     L
Sbjct:   34 PPVGVARAPGRVNLIGEHVDYEGYAVLPMAIEQ-SVYVAFSIQRSNSREGVKVLSMANAK-PQYKTVTLSMDENEQGNMQKLEQEKATWAKYVLCGILGLRDARSELFKGEVTELK-----LLVDGDIPAGCGLSSSSALVVAAALATNSALETPGRELLRRTELAELCRTAEHRVGTMGGGMDQAVACLAQRGDAVYLDFSSVPARCKLVNVPDAAAGVTFVVANSMVVAEKAVDAATRFNKRVVECALAAKLIAKKAGLEDWRKITRL 296          
BLAST of NO11G02220 vs. NCBI_GenBank
Match: POM76660.1 (Galactokinase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 181.4 bits (459), Expect = 1.200e-41
Identity = 115/270 (42.59%), Postives = 158/270 (58.52%), Query Frame = 0
Query:   44 PRLAVVQAPGRVNLIGEHIDYSGYSVLPTALDDYTAMIAIGANPSRSHDGVKVLNLDRAKFPETRYLSLT-------SPTFMSDAPHDWISYVECALQGVR----RQFSGDIDETKLNGLVLVVQGTVPPAAGLSSSSALVVAAALAFCWSV---GKGDIRKVTLAALCVECERLVGTAGGGMDQTVSCLAEPRKALLIDFE---PGLKAMAVP-LPPGIVIVVADSEVASEKAVSATTQFNRRVVECQLATWMLAKSAGFENWSSFETL 296
            P + + +APGRVNLIGEH+DY GY+VLP A++  +  +A     S S +GVKVL++  AK P+ + ++L+       +   +      W  YV C + G+R      F G++ E K     L+V G +P   GLSSSSALVVAAALA   ++   G+  + +  LA LC   E  VGT GGGMDQ V+CLA+   A+ +DF       K + VP    G+  VVA+S V +EKAV A T+FN+RVVEC LA  ++AK AGFE+W     L
Sbjct:   34 PPVGIARAPGRVNLIGEHVDYEGYAVLPMAIEQ-SVYVAFSIQRSNSREGVKVLSMANAK-PQYKTVTLSMDENEQENMQKLEQEKAMWAKYVLCGILGLRDARSELFKGEVTELK-----LLVDGDIPAGCGLSSSSALVVAAALATNSALETPGRELLSRNELAELCRTAEHRVGTMGGGMDQAVACLAQRGDAVYLDFSSVPARCKLVNVPDAAVGVTFVVANSLVVAEKAVDAATRFNKRVVECALAAKLIAKKAGFEDWRKITRL 296          
BLAST of NO11G02220 vs. NCBI_GenBank
Match: XP_018620636.1 (PREDICTED: N-acetylgalactosamine kinase [Scleropages formosus])

HSP 1 Score: 179.5 bits (454), Expect = 4.500e-41
Identity = 118/288 (40.97%), Postives = 169/288 (58.68%), Query Frame = 0
Query:   43 KPRLAVVQAPGRVNLIGEHIDYSGYSVLPTALDDYTAMIAIGANPSRSHDGVKVLNLDRAKFPETRYLSLTSPTFMSDAPH-DWISYVECALQGVRRQFSGDIDETKLNGLVLVVQGTVPPAAGLSSSSALVVAAALAFCWSVGKGDIRKVTLAALCVECERLVGTAGGGMDQTVSCLAEPRKALLIDFEPGLKAMAVPLPPGIVIVVADSEVASEKAVSATTQFNRRVVECQLATWMLAKSAGFENWSSFETLHQLELSFGA--------LGELLHHLPAGQVPVCK 322
            +P L    APGRVNLIGEHIDY GY+VLP A++  + + A+  N ++S   +++ N++    P+ +  +++S     D  +  W  Y  C ++GV+      +    L G+  VV GTVPP++GLSSSSALV  A L    +  K  + KV LA +C  CER +GT GGGMDQ++S LAE   A LI+F P L+A+ V LP G V V+A+  V   KA  AT+ FN RVVEC+LA  +LAK  G + WS  + L +++ + GA        + E+LH  P  +  VC+
Sbjct:   29 EPPLFYACAPGRVNLIGEHIDYCGYAVLPMAIEQ-SILAAVSVNDTQS---IQLANVN----PQYKDFAVSSEELQIDRTNPQWYYYYLCGVRGVKEH----LGLAPLAGMKCVVDGTVPPSSGLSSSSALVCCAGLVTLEANNK-MLSKVELAEICARCERYIGTEGGGMDQSISFLAEEGTAKLIEFNP-LRAVDVKLPDGAVFVIANCCVEMNKA--ATSHFNIRVVECRLAAKLLAKRRGLD-WSCVQRLSEVQAALGASLEEMLTMVQEVLHPEPYSREEVCQ 299          
BLAST of NO11G02220 vs. NCBI_GenBank
Match: XP_007246590.2 (N-acetylgalactosamine kinase [Astyanax mexicanus])

HSP 1 Score: 179.5 bits (454), Expect = 4.500e-41
Identity = 118/280 (42.14%), Postives = 166/280 (59.29%), Query Frame = 0
Query:   51 APGRVNLIGEHIDYSGYSVLPTALDDYTAMIAIGANPSRSHDGVKVLNLDRAKFPETRYLSLTSPTFMSDAPHDWISYVECALQGVRRQFSGDIDETKLNGLVLVVQGTVPPAAGLSSSSALVVAAALAFCWSVGKGDIRKVTLAALCVECERLVGTAGGGMDQTVSCLAEPRKALLIDFEPGLKAMAVPLPPGIVIVVADSEVASEKAVSATTQFNRRVVECQLATWMLAKSAGFENWSSFETLHQLELSFG--------ALGELLHHLPAGQVPVCKL 323
            APGRVNLIGEHIDY GY+VLP A++    + A+  N S++   +++ N D  K+ +   +S+   T   + P  W  Y  C ++GV+ Q    +  + + G+  VV GT+P ++GLSSSSALV  A L       +  I KV LA  C +CER +GT GGGMDQ++S LAE   A LI+F P L+A  V LP G V V+A+S V   KA  A++ FN RVVEC++AT +LAK+ G E WSS + L  L+ + G         + E+LH  P  +  +CK+
Sbjct:   39 APGRVNLIGEHIDYCGYAVLPMAIEQ-NILAAVSVNSSQT---IQLANTD-PKYKDFT-VSVNEITIDRENP-QWHYYFLCGVKGVQEQ----LGLSSMTGISCVVDGTIPASSGLSSSSALVCCAGLV-TMEANQKTISKVLLAETCAKCERYIGTEGGGMDQSISFLAEEGTAKLIEFNP-LRATDVKLPEGAVFVIANSCVEMNKA--ASSHFNIRVVECRIATKVLAKARGLE-WSSLQKLGDLQTALGLSLEKMLDLVEEVLHPEPYSREEICKI 302          
BLAST of NO11G02220 vs. NCBI_GenBank
Match: XP_021434025.1 (N-acetylgalactosamine kinase [Oncorhynchus mykiss])

HSP 1 Score: 177.6 bits (449), Expect = 1.700e-40
Identity = 118/285 (41.40%), Postives = 164/285 (57.54%), Query Frame = 0
Query:   46 LAVVQAPGRVNLIGEHIDYSGYSVLPTALDDYTAMIAIGANPSRSHDGVKVLNLDRAKFPETRYLSLTSPTFMSDAPH-DWISYVECALQGVRRQFSGDIDETKLNGLVLVVQGTVPPAAGLSSSSALVVAAALAFCWSVGKGDIRKVTLAALCVECERLVGTAGGGMDQTVSCLAEPRKALLIDFEPGLKAMAVPLPPGIVIVVADSEVASEKAVSATTQFNRRVVECQLATWMLAKSAGFENWSSFETLHQLELSFGA--------LGELLHHLPAGQVPVCK 322
            L   QAPGRVNLIGEHIDY GY+VLP A++  + + A+  N S      K +NL   + P+ +  +++S     D  +  W  Y  C ++G++      + +  L+G+  VV GT+P ++GLSSSSALV  AAL     V    + KV LA +  +CER +GT GGGMDQ++S LAE   A LI+F+P L+A  V LP G V V+++  V   KA  AT+ FN RVVEC++AT MLAK+ G E W     L Q++    A        + E+LH  P  +  VCK
Sbjct:   34 LFYAQAPGRVNLIGEHIDYCGYAVLPMAIEQ-SILAAVTVNDS------KKINLANTE-PKYKDFTVSSEDMEIDKDNPQWYYYFLCGVKGIQEH----LGKVPLSGMKCVVDGTIPASSGLSSSSALVCCAAL-LTMEVNHKSLNKVALAEISAKCERYIGTEGGGMDQSISFLAEEGTAKLIEFQP-LRASDVRLPEGAVFVISNCCVEMNKA--ATSHFNIRVVECRIATKMLAKARGLE-WGRLLKLSQVQTELEASLEEMLRLVAEVLHPEPYSREEVCK 301          
BLAST of NO11G02220 vs. NCBI_GenBank
Match: XP_017341384.1 (PREDICTED: N-acetylgalactosamine kinase [Ictalurus punctatus])

HSP 1 Score: 177.2 bits (448), Expect = 2.200e-40
Identity = 115/281 (40.93%), Postives = 165/281 (58.72%), Query Frame = 0
Query:   51 APGRVNLIGEHIDYSGYSVLPTALDDYTAMIAIGANPSRSHDGVKVLNLDRAKFPETRYLSLTSPTFMSDAPH-DWISYVECALQGVRRQFSGDIDETKLNGLVLVVQGTVPPAAGLSSSSALVVAAALAFCWSVGKGDIRKVTLAALCVECERLVGTAGGGMDQTVSCLAEPRKALLIDFEPGLKAMAVPLPPGIVIVVADSEVASEKAVSATTQFNRRVVECQLATWMLAKSAGFENWSSFETLHQLELSFGA--------LGELLHHLPAGQVPVCKL 323
            APGRVNLIGEHIDY GY+VLP A++    + A+  N S++   +++ N D    P+ +  ++++     D  +  W  Y  C ++G++ Q S     + L G+  VV GT+P ++GLSSSSALV  A L       +  + KV LA  C +CER +GT GGGMDQ++S LAE   A LIDF P L++  V LP G V V+A+S V   KA  AT+ FN RVVEC++AT +LA   G E W+S + L +L+   G+        + E+LH  P  +  +CK+
Sbjct:   39 APGRVNLIGEHIDYCGYAVLPMAIEQ-NILAAVSVNNSQT---IQLANTD----PKYKDFTVSACEITIDPENPQWHYYFLCGVKGIQEQLS----LSSLAGIRCVVDGTIPASSGLSSSSALVCCAGLV-TMEANQKSVSKVLLAETCAKCERYIGTEGGGMDQSISFLAEEGTAKLIDFNP-LRSTDVKLPDGAVFVIANSCVEMNKA--ATSHFNIRVVECRIATKILATVRGLE-WNSLQKLGELQTQLGSSLDKMLDLVEEVLHPEPYTREEICKM 302          
BLAST of NO11G02220 vs. NCBI_GenBank
Match: OQR66581.1 (N-acetylgalactosamine kinase-like [Tropilaelaps mercedesae])

HSP 1 Score: 176.8 bits (447), Expect = 2.900e-40
Identity = 115/282 (40.78%), Postives = 163/282 (57.80%), Query Frame = 0
Query:   48 VVQAPGRVNLIGEHIDYSGYSVLPTALDDYTAMIAIGANPSRSHDGVKVLNLDRAKFPETRYLSLTSPTFMSDAPHDWISYVECALQGVRRQFSGDIDETKLNGLVLVVQGTVPPAAGLSSSSALVVAAALAFCWSVGKGDIRKVTLAALCVECERLVGTAGGGMDQTVSCLAEPRKALLIDFEPGLKAMAVPLPPGIVIVVADSEVASEKAVSATTQFNRRVVECQLATWMLAKSAGFENWSSFETLHQ---LELSFGALGEL----LHHLPAGQVPVCKL 323
            VV+APGRVN+IGEHIDY GY V P A++     I + A  + S+  +++ N++  ++P  +Y    S   ++ +   W  Y  C ++ ++ +FSG    T L G+ L+V+G +PPAAG+SSSSALV +AALA   ++G+ D+ +  LA+LC +CER VG  GGGMDQ +  LAE   A LI FEP L A  V LPP  V VVA+S V   K    T+ +N RVVEC+LA  ++ +  G E        H    L+LS     EL    LH  P     +C++
Sbjct:   53 VVRAPGRVNIIGEHIDYCGYGVFPMAVEQ---DILVAAKKTTSNT-IELRNVE-VRYP--KYSCPLSAISINSSSPQWFDYFLCGVKAIQERFSG----TSLPGMHLLVEGCIPPAAGMSSSSALVCSAALAAMNAIGE-DLPRDELASLCAKCERYVGVQGGGMDQAICLLAEEGAAKLIQFEPALTAQTVQLPPAAVFVVANSCVEINK--GNTSYYNTRVVECRLAAQLILEKNGKEWRKPVRLSHVQKCLKLSLEKAAELVKSTLHAHPYSLAELCEV 320          
BLAST of NO11G02220 vs. NCBI_GenBank
Match: KPP63314.1 (N-acetylgalactosamine kinase-like [Scleropages formosus])

HSP 1 Score: 176.4 bits (446), Expect = 3.800e-40
Identity = 117/288 (40.62%), Postives = 168/288 (58.33%), Query Frame = 0
Query:   43 KPRLAVVQAPGRVNLIGEHIDYSGYSVLPTALDDYTAMIAIGANPSRSHDGVKVLNLDRAKFPETRYLSLTSPTFMSDAPH-DWISYVECALQGVRRQFSGDIDETKLNGLVLVVQGTVPPAAGLSSSSALVVAAALAFCWSVGKGDIRKVTLAALCVECERLVGTAGGGMDQTVSCLAEPRKALLIDFEPGLKAMAVPLPPGIVIVVADSEVASEKAVSATTQFNRRVVECQLATWMLAKSAGFENWSSFETLHQLELSFGA--------LGELLHHLPAGQVPVCK 322
            +P L    APGRVNLIGEHIDY GY+VLP A++  + + A+  N ++S   +++ N++    P+ +  +++S     D  +  W  Y  C ++GV+      +    L G+  VV GTVPP++GLSSSSALV  A L    +  K  + KV LA +C  CER +GT GG MDQ++S LAE   A LI+F P L+A+ V LP G V V+A+  V   KA  AT+ FN RVVEC+LA  +LAK  G + WS  + L +++ + GA        + E+LH  P  +  VC+
Sbjct:   29 EPPLFYACAPGRVNLIGEHIDYCGYAVLPMAIEQ-SILAAVSVNDTQS---IQLANVN----PQYKDFAVSSEELQIDRTNPQWYYYYLCGVRGVKEH----LGLAPLAGMKCVVDGTVPPSSGLSSSSALVCCAGLVTLEANNK-MLSKVELAEICARCERYIGTEGGRMDQSISFLAEEGTAKLIEFNP-LRAVDVKLPDGAVFVIANCCVEMNKA--ATSHFNIRVVECRLAAKLLAKRRGLD-WSCVQRLSEVQAALGASLEEMLTMVQEVLHPEPYSREEVCQ 299          
The following BLAST results are available for this feature:
BLAST of NO11G02220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24992.12.300e-7738.21Zinc finger, HIT-type [Nannochloropsis gaditana][more]
XP_005855199.15.100e-7738.21hit zinc finger family protein, partial [Nannochlo... [more]
POM71118.11.400e-4242.96Galactokinase [Phytophthora palmivora var. palmivo... [more]
POM76660.11.200e-4142.59Galactokinase [Phytophthora palmivora var. palmivo... [more]
XP_018620636.14.500e-4140.97PREDICTED: N-acetylgalactosamine kinase [Scleropag... [more]
XP_007246590.24.500e-4142.14N-acetylgalactosamine kinase [Astyanax mexicanus][more]
XP_021434025.11.700e-4041.40N-acetylgalactosamine kinase [Oncorhynchus mykiss][more]
XP_017341384.12.200e-4040.93PREDICTED: N-acetylgalactosamine kinase [Ictalurus... [more]
OQR66581.12.900e-4040.78N-acetylgalactosamine kinase-like [Tropilaelaps me... [more]
KPP63314.13.800e-4040.63N-acetylgalactosamine kinase-like [Scleropages for... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002034NSK002034Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G02220.1NO11G02220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|671272gene_5114Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100122g14gene5506Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G02220.1NO11G02220.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G02220 ID=NO11G02220|Name=NO11G02220|organism=Nannochloropsis oceanica|type=gene|length=3538bp
ATGCCTCCCATCGATATCCGGGCCGCAGCTTTGATCGAGCGTCTCAAGCG
AGAACTCGGGGTCCGGACTGAAGATTCAGCACTGCCGTTGTCGTCGTCCT
CCTCTACCTCGCCCACTTATCCCACAAAACCAAGACTGGCCGTCGTCCAG
GCACCGGGCAGGGTAAACTTGATTGGGGAGCACATCGATTACAGTGgtac
gtgtatgtcttgctgtgattgagagaaattgtgccgcctttcggccataa
tcggtgcttgtgttttcccactgacctcttcattctggacccttactcga
agcagcctgcccttgcccatcttccccggaaaacttcagtccatcctgta
tgtgacctctccgtaaagctaatcttttctctcttgtcttccaactgcta
cgctctcaacaatctactcacactatcactagGCTATTCCGTTCTCCCCA
CGGCCTTGGACGATTACACTGCAATGATCGCAATCGGTGCGAACCCCTCC
CGATCCCACGACGGCGTCAAGGTTCTCAACCTCGACCGAGCCAAATTTCC
AGAAACCCGCTATTTGTCCCTGACATCACCGACATTTATGTCAGATGCAC
CTCACGATTGGATCAGTTATGTGGAATGTGCCTTACAAGGGGTGCGTCGT
CAATTCTCCGGCGACATCGACGAGACCAAGTTGAACGGCTTGGTGCTTGT
CGTCCAAGGAACCGTGCCTCCCGCGGCGGGTCTGAGCAGTAGCTCGGCAT
TAGTTGTGGCGGCGGCCTTGGCCTTTTGTTGGTCGGTTGGCAAGGGAGAC
ATTCGAAAAGTGACCCTGGCGGCGCTGTGTGTAGAGTGCGAGCGATTGGT
GGGAACGGCAGGGGGAGGGATGGACCAGACGGTATCGTGTTTGGCTGAGC
CGAGAAAGGCTCTTCTGATTGACTTTGAGCCAGGGTTGAAAGCGATGGCA
GTACCTCTTCCTCCGGGAATAGTAATTGTTGTGGCTGATAGTGAGGTGGC
ATCGGAGAAGGCAGTGAGTGCTACTACGCAATTTAATCGACGCGTCGTTG
AATGCCAGCTCGCGACGTGGATGCTGGCGAAAAGTGCAGGCTTCGAAAAT
TGGTCCTCGTTTGAGACGCTGCATCAATTGGAGCTATCTTTTGGCGCGCT
TGGGGAACTACTTCATCATTTGCCGGCTGGACAAGTGCCCGTTTGTAAGC
TTCAACGGAGTCTGAGTGTGGGAGACTTCTTCCCGCCATTTCCAGACAGg
tacagcgaggtcgctgagcgggtgctagcaaataccatgtcttttaatct
cagggaccgagctatacatgtgttgaacgaaaaggaccgcgtacaaaggt
tcgcagccctctgtctttccgctggaacaaccacttcttgcgctcaatca
cttggtgcgcttatgaatcaaagtcattcctcgtgcagggacttatatga
gtgttcttgtcctgagcttgatgagttggttgctatttgccaaaccgcac
ccggatgccttggggcgaggctaacaggcgccggctggggtgggatgtgt
gtggcattgtgtgacgaaggagctgtggaagattttatgacaaatgtaaa
agagaaattttataagcaaagaggaaagggtgatgatggtgaaaagtctc
ctcttatgttcgttacgcgcgccggaggcggtgcgggcgtggtgtgggaa
ggaaaattgggggaataggggggggtaggatggggcaatgaacaactgaa
tgaacgaataaaagaatgaataaggaagatgggggcgagtgtgacataac
atagtaacacaaagaaagaaactcaataaacgaaggaatgaatgaatgag
ctgaccgcaaccttcctccaataatcgtacccagcaatccgcctcgacta
caaagtgagtatcctaaagaccacaaacaaacaacgacacacactaatga
acacagGCACTCGATCGAAAGGATGGTATCCTTGAATATCGTCCGGAAGA
CGCGTCCGGGATCTTTTTTTGTGACCAAGACCGACGTCTTGCCGAGGGAC
GAGGATGAGGCGGGTGCCGGCCTGCTCATCCGCGGCCCCATGCGTCGAGT
CTGCTTGGTGTGCAAATCCAAGGCCTCTGCCTACGCCTGTCCACGCTGTG
CCACACCCTATTGCTCCTCCATCTGTTATAAAGGACACAACCAAGGTTGT
ACCGAGGGTTTCTACCGGCAGCACGTTGAGAAAGAAATTCTCCTCCGTCA
AGCAGAGGAAGGCGGCGGTGGCCCGGGTGGACCACCTGGCGGCCCCACAG
CTCGTCAAGCTGTGGTCGATGCACTCAGACGTGTCCACCTCAAACAGCAA
GAGCCAAATCAGGCATGGTCGGAGATGGAGGATGACCGATTGGAAGAGCT
GTGGGCCCGTGGGGATGCCTTGGATTTGGAGGCCTTGACCCCGGAGGAGC
AACGGGCTTTTCGGGCCGCCATTGCCAGTGGGGAGTTGGGTAAAGACGTA
GAAGTGTGGACACCCTGGTGGTGCCAAGGGGGAATGTCTATGCAAAGCAA
TCCCTTTGTGGTAGTGGAGGGAGAAGTGGAAGGGGCAGGAGAGGCAGTAG
CTGCACCGGGTGACGAACCAGAAAAGGAATGGAGCGGGCAAGTAGATTTT
GGTTCATTATACCAAGGATTACAGTACGAGAAAACCAAGGCCGAAACAAT
GACAGCCATACCCTCTTCTTCCAACAGCAGCAGCAGCAGCAACAGCAGCC
CCTCTCCCTTCCTCAAATACCATCTGCTCGATCTCCTCTTTGCCTACGCG
GCCGTGCTTCGAACGTACAATGGCTGCTGGAACGTCGCCCCCGAGGAAGC
AGCAGAGGACTTGCTTGCCTTGTCTCCCGTCCTTCAGCAGCAGCAGCATC
AGCAGCATCAGCAGCTTAGGCTTGAATCGGCAGCGGGGGCGCTGGCGAGT
TCCTTAACAGCGTTGCGGCAATGGAAAGGGGCGGATGCCACCACCACTCC
TTCCACAACTTCCTCCTCGTCTTCCGTCTCCTTGCCTTTGACCTCATTTT
CAACTTCCTCATCTACTTCGTTGGCCATGGGTTTGGCCTTAGCCCAAGAC
GTGACGGTGCTCCTGGCGCGTCGAGTAAAAACACAAGCGGCGCTTCTAGA
TGCCAGGCGAATGGTGCATGCAGCGCTGGCAGAAATTTTGATGGAGGAGA
GAGAAACCAAGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAACAACAGCAA
GGTGGAGATAAAGAAGAAGAGGACGAGATCCGGCTGTTGAGTAGCATGGT
GGAGGCCTTGTCGTGTTCGGACGGGAAAAGAGGAGGATCGAAGAGAAGGA
AGGAGCGAAGACAGGCGGGCAAGCGCTTATTGCAGCTATGGCATAAATTG
CGATATTTTTTCCTCTGGGCTTGTCGAAATGGAGAGGAGAGGGAGGAAGA
GCTGCGGGAGTTGCGGATTGAGTTTGCACGGGCATTACGTGAGCACCAGG
TGGTGGCAAGCTGCACCATACCCACGGAGATAAAGTGA
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protein sequence of NO11G02220.1

>NO11G02220.1-protein ID=NO11G02220.1-protein|Name=NO11G02220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=865bp
MPPIDIRAAALIERLKRELGVRTEDSALPLSSSSSTSPTYPTKPRLAVVQ
APGRVNLIGEHIDYSGYSVLPTALDDYTAMIAIGANPSRSHDGVKVLNLD
RAKFPETRYLSLTSPTFMSDAPHDWISYVECALQGVRRQFSGDIDETKLN
GLVLVVQGTVPPAAGLSSSSALVVAAALAFCWSVGKGDIRKVTLAALCVE
CERLVGTAGGGMDQTVSCLAEPRKALLIDFEPGLKAMAVPLPPGIVIVVA
DSEVASEKAVSATTQFNRRVVECQLATWMLAKSAGFENWSSFETLHQLEL
SFGALGELLHHLPAGQVPVCKLQRSLSVGDFFPPFPDRHSIERMVSLNIV
RKTRPGSFFVTKTDVLPRDEDEAGAGLLIRGPMRRVCLVCKSKASAYACP
RCATPYCSSICYKGHNQGCTEGFYRQHVEKEILLRQAEEGGGGPGGPPGG
PTARQAVVDALRRVHLKQQEPNQAWSEMEDDRLEELWARGDALDLEALTP
EEQRAFRAAIASGELGKDVEVWTPWWCQGGMSMQSNPFVVVEGEVEGAGE
AVAAPGDEPEKEWSGQVDFGSLYQGLQYEKTKAETMTAIPSSSNSSSSSN
SSPSPFLKYHLLDLLFAYAAVLRTYNGCWNVAPEEAAEDLLALSPVLQQQ
QHQQHQQLRLESAAGALASSLTALRQWKGADATTTPSTTSSSSSVSLPLT
SFSTSSSTSLAMGLALAQDVTVLLARRVKTQAALLDARRMVHAALAEILM
EERETKQQQQQQQRQQQQQGGDKEEEDEIRLLSSMVEALSCSDGKRGGSK
RRKERRQAGKRLLQLWHKLRYFFLWACRNGEEREEELRELRIEFARALRE
HQVVASCTIPTEIK*
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Synonyms
Publications