NO11G02210, NO11G02210 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G02210 vs. NCBI_GenBank
Match: KUF77704.1 (Eukaryotic translation initiation factor 4E [Phytophthora nicotianae]) HSP 1 Score: 165.2 bits (417), Expect = 2.200e-37 Identity = 74/167 (44.31%), Postives = 120/167 (71.86%), Query Frame = 0 Query: 36 AGKHKLQNRWSFFYNNP-KANPMLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLGLQADYYLFKDGVRPSYEE--NPTGGVWTFNLEKNNKKKLEETWLHLVLGMIGETMEDGNDILGAVVSIKRGQDRLSLWTKTAADKELQVQIARRVKTSL-DLPEGTMLEFK 199 A KH LQNRW +Y+NP K + SWEE L+ +YTF TVEDFW L+N+++ P++L + ++Y+LFK+G+RP +E+ N GG W F ++ K +L+E WL+++L +IGET++D +DI GAVVS+++ QDR+++W+ TA+ ++ Q I R + +L DL + L+++ Sbjct: 36 ATKHPLQNRWVLWYDNPKKRHSTESWEENLKNVYTFNTVEDFWCLYNNILTPTKLSIGSNYHLFKEGIRPMWEDPVNAKGGKWIFTNPRSRKARLDECWLYVMLSLIGETLQDEDDICGAVVSVRKAQDRIAIWSATASAEDRQKAIGRGFRQALVDLGKNETLKYQ 202
BLAST of NO11G02210 vs. NCBI_GenBank
Match: XP_002907026.1 (eukaryotic initiation factor 4E, putative [Phytophthora infestans T30-4] >EEY66427.1 eukaryotic initiation factor 4E, putative [Phytophthora infestans T30-4]) HSP 1 Score: 164.9 bits (416), Expect = 2.900e-37 Identity = 74/167 (44.31%), Postives = 119/167 (71.26%), Query Frame = 0 Query: 36 AGKHKLQNRWSFFYNNP-KANPMLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLGLQADYYLFKDGVRPSYEE--NPTGGVWTFNLEKNNKKKLEETWLHLVLGMIGETMEDGNDILGAVVSIKRGQDRLSLWTKTAADKELQVQIARRVKTSL-DLPEGTMLEFK 199 A KH LQNRW +Y+NP K + SWEE L+ +YTF TVEDFW L+N+++ P++L + ++Y+LFK+G+RP +E+ N GG W F ++ K +L+E WL+++L +IGET++D +DI GAVVS+++ QDR+++W+ TA ++ Q I R + +L DL + L+++ Sbjct: 33 ATKHPLQNRWVLWYDNPKKRHSTESWEENLKNVYTFNTVEDFWCLYNNILAPTKLSIGSNYHLFKEGIRPMWEDPINAKGGKWIFTNPRSRKARLDECWLYVMLSLIGETLQDEDDICGAVVSVRKAQDRIAIWSATANAEDRQKAIGRGFRQALVDLGKNETLKYQ 199
BLAST of NO11G02210 vs. NCBI_GenBank
Match: XP_024584924.1 (eukaryotic translation initiation factor 4e [Plasmopara halstedii] >CEG48555.1 eukaryotic translation initiation factor 4e [Plasmopara halstedii]) HSP 1 Score: 163.3 bits (412), Expect = 8.500e-37 Identity = 74/167 (44.31%), Postives = 120/167 (71.86%), Query Frame = 0 Query: 36 AGKHKLQNRWSFFYNNP-KANPMLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLGLQADYYLFKDGVRPSYEE--NPTGGVWTFNLEKNNKKKLEETWLHLVLGMIGETMEDGNDILGAVVSIKRGQDRLSLWTKTAADKELQVQIARRVKTSL-DLPEGTMLEFK 199 A KH LQNRW +Y+NP K + SWEE L+ IY F+TVEDFW L+N+++ P++L + ++Y+LFK+G+RP +E+ N GG W F ++ K +L+E WL+++L +IGET+ D +DI GAVVS+++ QDR+++W+ TA+ ++ Q I R + +L DL + +L+++ Sbjct: 130 ATKHPLQNRWVLWYDNPKKRHSTESWEENLKNIYAFDTVEDFWCLYNNILVPTKLSIGSNYHLFKEGIRPMWEDPINAKGGKWIFTNPRSRKARLDECWLYVMLSLIGETLHDEDDISGAVVSVRKAQDRIAIWSGTASAEDRQKAIGRGFRQALVDLGKNEILKYQ 296
BLAST of NO11G02210 vs. NCBI_GenBank
Match: PSC67569.1 (hypothetical protein C2E20_8778 [Micractinium conductrix]) HSP 1 Score: 157.5 bits (397), Expect = 4.700e-35 Identity = 68/163 (41.72%), Postives = 110/163 (67.48%), Query Frame = 0 Query: 38 KHKLQNRWSFFYNNPKA-NPMLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLGLQADYYLFKDGVRPSYEEN--PTGGVWTFNLEKNNKKKLEETWLHLVLGMIGETMEDGNDILGAVVSIKRGQDRLSLWTKTAADKELQVQIARRVKTSLDLPEGTMLEF 198 KH L+ +W+ +++NP +W + L+ +YTF++VEDFW L+N+++ PSRL +D +LF++G+ P +E+ GG WT + K+NK+ L+ WLH VLG IGE +DG +I G VV+++ QDR+S+WTKTAA++ LQ + R++K L +P+ + F Sbjct: 20 KHALETKWTLWFDNPNGKQKQATWGQTLRAVYTFDSVEDFWCLYNNIIPPSRLSPGSDLHLFREGIEPKWEDPRCEHGGKWTAMVPKSNKQMLDTMWLHGVLGSIGEQFDDGEEICGIVVNVRPKQDRISVWTKTAANEALQTNVGRQLKEMLQIPDQAKIGF 182
BLAST of NO11G02210 vs. NCBI_GenBank
Match: XP_009834832.1 (hypothetical protein H257_10085 [Aphanomyces astaci] >ETV75701.1 hypothetical protein H257_10085 [Aphanomyces astaci]) HSP 1 Score: 157.1 bits (396), Expect = 6.100e-35 Identity = 69/166 (41.57%), Postives = 117/166 (70.48%), Query Frame = 0 Query: 38 KHKLQNRWSFFYNNPK---ANPMLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLGLQADYYLFKDGVRPSYEE--NPTGGVWTFNLEKNNKKKLEETWLHLVLGMIGETMEDGNDILGAVVSIKRGQDRLSLWTKTAADKELQVQIARRVKTSLDLPEGTMLEFK 199 KH LQ+RW +Y+NPK AN SWEE L+ +YTF+TVEDFW +FN+++ P++L + ++Y+LFK+G+RP +E+ N GG W + + +L++ W++ +L +IGE +ED +D+ GAVVS+++ QDR+++WT+TA ++ LQ ++ + LDL + L+++ Sbjct: 45 KHPLQHRWVLWYDNPKKKLANE--SWEENLKVVYTFDTVEDFWGMFNNILPPTKLLVGSNYHLFKEGIRPMWEDPINAKGGKWVLTNNRQRRARLDDAWMNTMLALIGECLEDDDDLSGAVVSVRKTQDRVAVWTQTATNEPLQRKVGSNFRKVLDLSKNEGLKYQ 208
BLAST of NO11G02210 vs. NCBI_GenBank
Match: XP_008864879.1 (hypothetical protein H310_02955 [Aphanomyces invadans] >ETW06804.1 hypothetical protein H310_02955 [Aphanomyces invadans]) HSP 1 Score: 156.8 bits (395), Expect = 8.000e-35 Identity = 64/164 (39.02%), Postives = 117/164 (71.34%), Query Frame = 0 Query: 38 KHKLQNRWSFFYNNPKAN-PMLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLGLQADYYLFKDGVRPSYEE--NPTGGVWTFNLEKNNKKKLEETWLHLVLGMIGETMEDGNDILGAVVSIKRGQDRLSLWTKTAADKELQVQIARRVKTSLDLPEGTMLEFK 199 KH LQ++W +Y+NPK +WEE L+ +Y+F+TVEDFW +FN+++ P++L + ++Y+LFK+G+RP +E+ N GG W + + +L++ W++ +L +IGE +ED +D+ GAVVS+++ QDR+++WT+TA +++LQ ++ + LDL + +L+++ Sbjct: 45 KHPLQHKWVLWYDNPKKKLASETWEESLKVVYSFDTVEDFWGMFNNILPPTKLHVGSNYHLFKEGIRPMWEDPINAKGGKWVLTNNRQRRPRLDDAWMNTMLALIGECLEDDDDLSGAVVSVRKTQDRIAVWTQTATNEQLQRKVGGNFRKVLDLSKNEVLKYQ 208
BLAST of NO11G02210 vs. NCBI_GenBank
Match: XP_013905346.1 (Eukaryotic translation initiation factor 4E-1 [Monoraphidium neglectum] >KIZ06327.1 Eukaryotic translation initiation factor 4E-1 [Monoraphidium neglectum]) HSP 1 Score: 152.1 bits (383), Expect = 2.000e-33 Identity = 65/165 (39.39%), Postives = 113/165 (68.48%), Query Frame = 0 Query: 38 KHKLQNRWSFFYNNP-KANPMLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLGLQADYYLFKDGVRPSYEE--NPTGGVWTFNLEK--NNKKKLEETWLHLVLGMIGETMEDGNDILGAVVSIKRGQDRLSLWTKTAADKELQVQIARRVKTSLDLPEGTMLEF 198 +H L+ RW+ +++NP + M + + L+ +Y+F+TVEDFW L+N++ PS+L A YYLFKDG++P +E+ N GG WT + + N + L+ WLH+VL IGE E+G+++ G V+I+ G++R+ +WTKTAA++ LQ+ + +++K+ +D+ + T + F Sbjct: 23 RHPLETRWTLWFDNPSQKQSMNKFGQGLRPVYSFDTVEDFWCLYNNIKAPSQLQPSATYYLFKDGIQPKWEDPKNTNGGCWTATVPRTPNANQLLDAWWLHVVLACIGEQFEEGDEVCGVTVNIRNGKNRIEMWTKTAANEALQISVGKQLKSLIDMSDNTKIGF 187
BLAST of NO11G02210 vs. NCBI_GenBank
Match: KUF99555.1 (hypothetical protein AM588_10010558 [Phytophthora nicotianae]) HSP 1 Score: 151.0 bits (380), Expect = 4.400e-33 Identity = 70/168 (41.67%), Postives = 116/168 (69.05%), Query Frame = 0 Query: 42 QNRWSFFYNNP-KANPMLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLGLQADYYLFKDGVRPSYEE--NPTGGVWTFNLEKNNKKKLEETWLHLV-------LGMIGETMEDGNDILGAVVSIKRGQDRLSLWTKTAADKELQVQIARRVKTSL-DLPEGTMLEFK 199 +NRW +Y+NP K + SWEE L+ +YTF TVEDFW L+N+++ P++L + ++Y+LFK+G+RP +E+ N GG W F ++ K +L+E WL++V L +IGET++D +DI GAVVS+++ QDR+++W+ TA+ ++ Q I R + +L DL + L+++ Sbjct: 38 KNRWVLWYDNPKKRHSTESWEENLKNVYTFNTVEDFWCLYNNILTPTKLSIGSNYHLFKEGIRPMWEDPVNAKGGKWIFTNPRSRKARLDECWLYVVRCKQNIMLSLIGETLQDEDDICGAVVSVRKAQDRIAIWSATASAEDRQKAIGRGFRQALVDLGKNETLKYQ 205
BLAST of NO11G02210 vs. NCBI_GenBank
Match: PRP88929.1 (hypothetical protein PROFUN_00397 [Planoprotostelium fungivorum]) HSP 1 Score: 150.2 bits (378), Expect = 7.500e-33 Identity = 70/164 (42.68%), Postives = 112/164 (68.29%), Query Frame = 0 Query: 38 KHKLQNRWSFFYNNP-KANPMLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLGLQADYYLFKDGVRPSYE--ENPTGGVWTFNLEKNNKKKLEETWLHLVLGMIGETMEDGNDILGAVVSIKRGQDRLSLWTKTAADKELQVQIARRVKTSLDLPEGTMLEFK 199 KH LQNRW+ +Y+NP K W++ L+KI TF+TVEDFW +FN++ S+L L ++Y+LFK+GV P +E +N GG W + K L++ WL L+LG+IGE+ E+ N+I G VVS+++ QDR++LWT+ A ++ +Q +I R+K L++P+ + ++ Sbjct: 37 KHPLQNRWTLWYDNPGKKITSQQWQDSLKKIVTFDTVEDFWGIFNNIRPASKLTLGSNYHLFKEGVEPKWEHPDNFKGGKWIVTI-KGRGSMLDQQWLWLLLGVIGESFEEENEICGCVVSLRKSQDRITLWTRNAYNEAVQRRIGYRLKRLLEIPDNITVGYQ 199
BLAST of NO11G02210 vs. NCBI_GenBank
Match: PRW60643.1 (eukaryotic translation initiation factor 4E [Chlorella sorokiniana]) HSP 1 Score: 149.8 bits (377), Expect = 9.700e-33 Identity = 68/163 (41.72%), Postives = 106/163 (65.03%), Query Frame = 0 Query: 38 KHKLQNRWSFFYNNPKA-NPMLSWEEKLQKIYTFETVEDFWALFNSVVGPSRLGLQADYYLFKDGVRPSYEEN--PTGGVWTFNLEKNNKKKLEETWLHLVLGMIGETMEDGNDILGAVVSIKRGQDRLSLWTKTAADKELQVQIARRVKTSLDLPEGTMLEF 198 KH L+ +W+ +++NP +W + L+ +YTF+TVEDFW L+N+++ PSRL +D +LF++G+ P +E+ GG WT + K NK+ L+ WLH VLG IGE +DG +I G VV+ DR+S+WTKTAA++ LQ + R++K L +P+ + F Sbjct: 176 KHPLETKWTLWFDNPNGKQKQATWGQTLRAVYTFDTVEDFWCLYNNIIPPSRLSPGSDLHLFREGIEPKWEDPRCEHGGKWTAMVPKGNKQLLDTMWLHGVLGSIGEQFDDGEEICGIVVN-----DRISVWTKTAANEALQTNVGRQLKEMLQIPDQAKIGF 333 The following BLAST results are available for this feature:
BLAST of NO11G02210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G02210 ID=NO11G02210|Name=NO11G02210|organism=Nannochloropsis oceanica|type=gene|length=1930bpback to top protein sequence of NO11G02210.1 >NO11G02210.1-protein ID=NO11G02210.1-protein|Name=NO11G02210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=222bpback to top protein sequence of NO11G02210.2 >NO11G02210.2-protein ID=NO11G02210.2-protein|Name=NO11G02210.2|organism=Nannochloropsis oceanica|type=polypeptide|length=166bpback to top protein sequence of NO11G02210.3 >NO11G02210.3-protein ID=NO11G02210.3-protein|Name=NO11G02210.3|organism=Nannochloropsis oceanica|type=polypeptide|length=221bpback to top Synonyms
Publications
|