NO11G01870, NO11G01870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G01870 vs. NCBI_GenBank
Match: ONK78823.1 (uncharacterized protein A4U43_C02F22800 [Asparagus officinalis]) HSP 1 Score: 347.8 bits (891), Expect = 8.000e-92 Identity = 197/417 (47.24%), Postives = 271/417 (64.99%), Query Frame = 0 Query: 316 DDFFFSRKAFDEIGASAEAQAAMQSLGISRPSKIQNIAYPHVLAGTSCILAEQTGSGKTLAYLLPLLQRLRQ--LEAAATAAGESPRAXXXXXXVVVLAPTAELAAQVATVARALTKH-LPLRVCCVTGGKNPRTQGEMLKSGVDVLIGTPGRVQYLLEEGKVLLGGMQALVLDEVDVMFLDDSFD--LSVIGAAAPAATQFLFVTATLPVAVADQISKEFPGVKKLWGPGLHKIAPQVEEVLVDCSGPMEEDRNEETAFVRKRDMLVQNLLKHQVRRSLVFCNSIPTCRKVENALRRADRSGNRWQILAYHSAVNPADREKHLGIF-SSRVERPLVMVCTDRTSRGVDFDKANVEHVVLFDFPRDPSEYVRXXXXXXXXXXXXXXT-ALVLGKQVGLARSIMEGNSKGARVHPVPN 726 D FFSRK F E+G + + +++SL RPS IQ +AY VL G SC++A+Q+GSGKTLAYL+P++QRLRQ L+ ++ SPR VV+L PTAELA+QV R+++KH +P R TGG +TQ + LK +DVLI TPGR YLL+EG V L ++ +VLDEVD++F D+ F+ L + ++AP Q++FVTATLPV + +++ + FP GPG+H+ + ++EEVLVDCSG E +N ETAF+ K+ L+Q + V +++VFCN I TCRKVEN L+R DRSG ++L +H+A+ R ++ F +SR + ++CTDR SRG+DF NV+HVVLFDFPRDPSEYVR V+GKQV LAR IME N KG +H VP+ Sbjct: 155 DSGFFSRKTFKELGCTGDMIESLRSLSFLRPSHIQALAYAPVLQGKSCVIADQSGSGKTLAYLIPIIQRLRQEELQGLGKSSSSSPR-------VVILVPTAELASQVLNNCRSISKHGVPFRSMVATGGFRQKTQLDSLKQELDVLIATPGRFIYLLQEGFVQLASLKCVVLDEVDILFGDEGFEQVLQSLISSAPMEAQYVFVTATLPVDIYNKLVQIFPDCGVTMGPGIHRTSSRLEEVLVDCSGEGME-KNPETAFINKKSALLQLAEESPVAKTIVFCNKIETCRKVENVLKRFDRSGLHIKVLPFHAALAQDVRRANMKEFLNSRSRDSMFLICTDRASRGIDF--PNVDHVVLFDFPRDPSEYVRRVGRTARGAKGEGKALVFVVGKQVSLARRIMERNKKGHPLHDVPS 561
BLAST of NO11G01870 vs. NCBI_GenBank
Match: XP_020255041.1 (LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 50 [Asparagus officinalis]) HSP 1 Score: 347.8 bits (891), Expect = 8.000e-92 Identity = 197/417 (47.24%), Postives = 271/417 (64.99%), Query Frame = 0 Query: 316 DDFFFSRKAFDEIGASAEAQAAMQSLGISRPSKIQNIAYPHVLAGTSCILAEQTGSGKTLAYLLPLLQRLRQ--LEAAATAAGESPRAXXXXXXVVVLAPTAELAAQVATVARALTKH-LPLRVCCVTGGKNPRTQGEMLKSGVDVLIGTPGRVQYLLEEGKVLLGGMQALVLDEVDVMFLDDSFD--LSVIGAAAPAATQFLFVTATLPVAVADQISKEFPGVKKLWGPGLHKIAPQVEEVLVDCSGPMEEDRNEETAFVRKRDMLVQNLLKHQVRRSLVFCNSIPTCRKVENALRRADRSGNRWQILAYHSAVNPADREKHLGIF-SSRVERPLVMVCTDRTSRGVDFDKANVEHVVLFDFPRDPSEYVRXXXXXXXXXXXXXXT-ALVLGKQVGLARSIMEGNSKGARVHPVPN 726 D FFSRK F E+G + + +++SL RPS IQ +AY VL G SC++A+Q+GSGKTLAYL+P++QRLRQ L+ ++ SPR VV+L PTAELA+QV R+++KH +P R TGG +TQ + LK +DVLI TPGR YLL+EG V L ++ +VLDEVD++F D+ F+ L + ++AP Q++FVTATLPV + +++ + FP GPG+H+ + ++EEVLVDCSG E +N ETAF+ K+ L+Q + V +++VFCN I TCRKVEN L+R DRSG ++L +H+A+ R ++ F +SR + ++CTDR SRG+DF NV+HVVLFDFPRDPSEYVR V+GKQV LAR IME N KG +H VP+ Sbjct: 253 DSGFFSRKTFKELGCTGDMIESLRSLSFLRPSHIQALAYAPVLQGKSCVIADQSGSGKTLAYLIPIIQRLRQEELQGLGKSSSSSPR-------VVILVPTAELASQVLNNCRSISKHGVPFRSMVATGGFRQKTQLDSLKQELDVLIATPGRFIYLLQEGFVQLASLKCVVLDEVDILFGDEGFEQVLQSLISSAPMEAQYVFVTATLPVDIYNKLVQIFPDCGVTMGPGIHRTSSRLEEVLVDCSGEGME-KNPETAFINKKSALLQLAEESPVAKTIVFCNKIETCRKVENVLKRFDRSGLHIKVLPFHAALAQDVRRANMKEFLNSRSRDSMFLICTDRASRGIDF--PNVDHVVLFDFPRDPSEYVRRVGRTARGAKGEGKALVFVVGKQVSLARRIMERNKKGHPLHDVPS 659
BLAST of NO11G01870 vs. NCBI_GenBank
Match: XP_020229176.1 (DEAD-box ATP-dependent RNA helicase 50 [Cajanus cajan] >KYP53569.1 DEAD-box ATP-dependent RNA helicase 50 [Cajanus cajan]) HSP 1 Score: 347.1 bits (889), Expect = 1.400e-91 Identity = 192/418 (45.93%), Postives = 277/418 (66.27%), Query Frame = 0 Query: 316 DDFFFSRKAFDEIGASAEAQAAMQSLGISRPSKIQNIAYPHVLAGTSCILAEQTGSGKTLAYLLPLLQRLRQ--LEAAATAAGESPRAXXXXXXVVVLAPTAELAAQVATVARALTKH-LPLRVCCVTGGKNPRTQGEMLKSGVDVLIGTPGRVQYLLEEGKVLLGGMQALVLDEVDVMFLDDSFD--LSVIGAAAPAATQFLFVTATLPVAVADQISKEFPGVKKLWGPGLHKIAPQVEEVLVDCSGPMEEDRNEETAFVRKRDMLVQNLLKHQVRRSLVFCNSIPTCRKVENALRRADRSGNRWQILAYHSAVNPADREKHLGIFSSRVERPL--VMVCTDRTSRGVDFDKANVEHVVLFDFPRDPSEYVRXXXXXXXXXXXXXXTAL-VLGKQVGLARSIMEGNSKGARVHPVPN 726 D FFS K+F +IG + ++Q L +RPS +Q +A+ V G +C++A+Q+GSGKTLAYL P++QRLRQ L+ + ++ ++PR V+VLAPTAELA+QV R+L+K +P + VTGG RTQ E L+ GVDVLI TPGR +L+ EG + L ++ VLDEVD++F D+ F+ L + ++P TQ+LFVTATLP + ++ + FP + + GPG+H+I+ ++EE++VDCSG +++ +TAF+ K+D L+Q + ++ V R++VFCN I TCRKVEN+LRR DR GNR Q+L +H+A+ R + F+S + + +M+CTDR SRG+DF A V+HV+LFDFPRDPSEYVR + V+GKQV LAR IME N KG +H VP+ Sbjct: 104 DTNFFSLKSFKQIGCTDYIIQSLQKLSFTRPSHVQAMAFAPVFRGKTCVIADQSGSGKTLAYLAPIIQRLRQEELDGRSKSSSQAPR-------VLVLAPTAELASQVLDNCRSLSKSGVPFKSMVVTGGFRQRTQLENLQQGVDVLIATPGRFLFLINEGFLQLTNLRCAVLDEVDILFGDEDFEVALQCLINSSPVDTQYLFVTATLPKNIYSKLVEVFPDCEMIMGPGMHRISSRLEEIVVDCSGEDGQEKTPDTAFLNKKDALLQLVEENPVPRTIVFCNKIETCRKVENSLRRFDRKGNRVQVLPFHAAMTQESRLASMEEFTSPPSKGVSQIMICTDRASRGIDF--AGVDHVMLFDFPRDPSEYVRRVGRTARGAKGVGKAFIFVVGKQVSLARKIMERNRKGHPLHDVPS 512
BLAST of NO11G01870 vs. NCBI_GenBank
Match: XP_018817943.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 50 isoform X1 [Juglans regia]) HSP 1 Score: 347.1 bits (889), Expect = 1.400e-91 Identity = 193/414 (46.62%), Postives = 272/414 (65.70%), Query Frame = 0 Query: 319 FFSRKAFDEIGASAEAQAAMQSLGISRPSKIQNIAYPHVLAGTSCILAEQTGSGKTLAYLLPLLQRLRQ--LEAAATAAGESPRAXXXXXXVVVLAPTAELAAQVATVARALTKH-LPLRVCCVTGGKNPRTQGEMLKSGVDVLIGTPGRVQYLLEEGKVLLGGMQALVLDEVDVMFLDDSFDLSV--IGAAAPAATQFLFVTATLPVAVADQISKEFPGVKKLWGPGLHKIAPQVEEVLVDCSGPMEEDRNEETAFVRKRDMLVQNLLKHQVRRSLVFCNSIPTCRKVENALRRADRSGNRWQILAYHSAVNPADREKHLGIFSSRVERPL--VMVCTDRTSRGVDFDKANVEHVVLFDFPRDPSEYVRXXXXXXXXXXXXXXT-ALVLGKQVGLARSIMEGNSKGARVHPVP 725 FFS+K+F E+G S +++ L SRPS IQ +A+P V+ G SCI+A+Q+GSGKTLAYL P++QRLRQ L+ + + +SPR VV++ PTAELA+QV RA++K +P + VTGG RTQ E LK GVDVLI TPGR +L++EG + L +++ VLDEVD++F D+ F++++ + ++P Q+LFVTATLP + +++ + FP + + GPG+H+I+P +EEVLVDCSG E ++ ETAF+ K+ L+Q + + V ++++FCN I TCRKVENAL+R DR G R Q+L +H+AV R + F+ + +VCTDR SRG+DF V+HVVLFDFPRDPSEYVR V+GKQV LAR+IM N KG +H +P Sbjct: 310 FFSKKSFGELGCSEFMIESLRGLRYSRPSHIQAMAFPFVIEGNSCIIADQSGSGKTLAYLAPIIQRLRQEELQELSKTSSQSPR-------VVIIVPTAELASQVLHNCRAISKSGVPFKSMVVTGGFRQRTQLENLKQGVDVLIATPGRFMFLIKEGFLQLINLRSAVLDEVDILFNDEDFEVALKSLMDSSPVTAQYLFVTATLPRDIYNKLVEIFPDCEVIMGPGMHRISPGLEEVLVDCSGQDEIEKTPETAFLHKKSALLQLVEESPVSKTIIFCNKIETCRKVENALKRLDRKGTRVQVLPFHAAVEQESRLANFKEFTRNQTDKVSQFLVCTDRASRGIDF--TGVDHVVLFDFPRDPSEYVRRVGRTARGASGKGKAFVFVVGKQVSLARNIMSRNQKGHPLHDLP 714
BLAST of NO11G01870 vs. NCBI_GenBank
Match: XP_018817944.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 50 isoform X2 [Juglans regia]) HSP 1 Score: 347.1 bits (889), Expect = 1.400e-91 Identity = 193/414 (46.62%), Postives = 272/414 (65.70%), Query Frame = 0 Query: 319 FFSRKAFDEIGASAEAQAAMQSLGISRPSKIQNIAYPHVLAGTSCILAEQTGSGKTLAYLLPLLQRLRQ--LEAAATAAGESPRAXXXXXXVVVLAPTAELAAQVATVARALTKH-LPLRVCCVTGGKNPRTQGEMLKSGVDVLIGTPGRVQYLLEEGKVLLGGMQALVLDEVDVMFLDDSFDLSV--IGAAAPAATQFLFVTATLPVAVADQISKEFPGVKKLWGPGLHKIAPQVEEVLVDCSGPMEEDRNEETAFVRKRDMLVQNLLKHQVRRSLVFCNSIPTCRKVENALRRADRSGNRWQILAYHSAVNPADREKHLGIFSSRVERPL--VMVCTDRTSRGVDFDKANVEHVVLFDFPRDPSEYVRXXXXXXXXXXXXXXT-ALVLGKQVGLARSIMEGNSKGARVHPVP 725 FFS+K+F E+G S +++ L SRPS IQ +A+P V+ G SCI+A+Q+GSGKTLAYL P++QRLRQ L+ + + +SPR VV++ PTAELA+QV RA++K +P + VTGG RTQ E LK GVDVLI TPGR +L++EG + L +++ VLDEVD++F D+ F++++ + ++P Q+LFVTATLP + +++ + FP + + GPG+H+I+P +EEVLVDCSG E ++ ETAF+ K+ L+Q + + V ++++FCN I TCRKVENAL+R DR G R Q+L +H+AV R + F+ + +VCTDR SRG+DF V+HVVLFDFPRDPSEYVR V+GKQV LAR+IM N KG +H +P Sbjct: 301 FFSKKSFGELGCSEFMIESLRGLRYSRPSHIQAMAFPFVIEGNSCIIADQSGSGKTLAYLAPIIQRLRQEELQELSKTSSQSPR-------VVIIVPTAELASQVLHNCRAISKSGVPFKSMVVTGGFRQRTQLENLKQGVDVLIATPGRFMFLIKEGFLQLINLRSAVLDEVDILFNDEDFEVALKSLMDSSPVTAQYLFVTATLPRDIYNKLVEIFPDCEVIMGPGMHRISPGLEEVLVDCSGQDEIEKTPETAFLHKKSALLQLVEESPVSKTIIFCNKIETCRKVENALKRLDRKGTRVQVLPFHAAVEQESRLANFKEFTRNQTDKVSQFLVCTDRASRGIDF--TGVDHVVLFDFPRDPSEYVRRVGRTARGASGKGKAFVFVVGKQVSLARNIMSRNQKGHPLHDLP 705
BLAST of NO11G01870 vs. NCBI_GenBank
Match: Q0DVX2.2 (RecName: Full=DEAD-box ATP-dependent RNA helicase 50 >ABF93566.1 DEAD/DEAH box helicase, putative, expressed [Oryza sativa Japonica Group] >BAG89672.1 unnamed protein product [Oryza sativa Japonica Group] >EEE58182.1 hypothetical protein OsJ_09113 [Oryza sativa Japonica Group] >BAS81898.1 Os03g0108600 [Oryza sativa Japonica Group]) HSP 1 Score: 346.3 bits (887), Expect = 2.300e-91 Identity = 193/416 (46.39%), Postives = 270/416 (64.90%), Query Frame = 0 Query: 316 DDFFFSRKAFDEIGASAEAQAAMQSLGISRPSKIQNIAYPHVLAGTSCILAEQTGSGKTLAYLLPLLQRLR--QLEAAATAAGESPRAXXXXXXVVVLAPTAELAAQVATVARALTKH-LPLRVCCVTGGKNPRTQGEMLKSGVDVLIGTPGRVQYLLEEGKVLLGGMQALVLDEVDVMFLDDSFD--LSVIGAAAPAATQFLFVTATLPVAVADQISKEFPGVKKLWGPGLHKIAPQVEEVLVDCSGPMEEDRNEETAFVRKRDMLVQNLLKHQVRRSLVFCNSIPTCRKVENALRRADRSGNRWQILAYHSAVNPADREKHLGIF-SSRVERPLVMVCTDRTSRGVDFDKANVEHVVLFDFPRDPSEYVRXXXXXXXXXXXXXXT-ALVLGKQVGLARSIMEGNSKGARVHPVP 725 D FFSR++F EIG S E A++S G RPS IQ +AY VL G SCI+ +Q+GSGKTLAYL P++Q LR ++E ++ +PR VVVL PTAELA+QV R+++K +P R TGG +TQ E L +DVLI TPGR YLL+EG V L ++ +VLDEVD+++ ++SF+ L + AP TQ+LFVTATLP+ + +++ + FP + + GPG+H+ + ++EE+LVDCSG E++N ETAF K+ LV+ + + VR++++FCN I TCRKVENALRR DR ++ ++L +H+A++ R ++ F + + + +VCTDR SRG+DF ANV HVVLFD+PRDPSEYVR +GKQV LAR +ME N KG +H VP Sbjct: 233 DSGFFSRRSFKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQNLRKEEVEGLHRSSPRNPR-------VVVLTPTAELASQVLNNCRSISKSGVPFRSMVATGGFRQKTQLESLDQELDVLIATPGRFLYLLQEGFVQLNNLRCVVLDEVDILYGEESFEQVLHQLITVAPLTTQYLFVTATLPLDIYNKVVETFPDCELIMGPGVHRTSSRLEEILVDCSGDDNEEKNPETAFSNKKSALVKIIEESPVRKTIIFCNKIETCRKVENALRRVDRKASQIKVLPFHAALDQQQRIANIKEFLNKQTADSMFLVCTDRASRGIDF--ANVNHVVLFDYPRDPSEYVRRVGRTARGASGNGKAFVFAVGKQVSLARRVMERNIKGHPLHDVP 639
BLAST of NO11G01870 vs. NCBI_GenBank
Match: BAF10616.1 (Os03g0108600, partial [Oryza sativa Japonica Group]) HSP 1 Score: 346.3 bits (887), Expect = 2.300e-91 Identity = 193/416 (46.39%), Postives = 270/416 (64.90%), Query Frame = 0 Query: 316 DDFFFSRKAFDEIGASAEAQAAMQSLGISRPSKIQNIAYPHVLAGTSCILAEQTGSGKTLAYLLPLLQRLR--QLEAAATAAGESPRAXXXXXXVVVLAPTAELAAQVATVARALTKH-LPLRVCCVTGGKNPRTQGEMLKSGVDVLIGTPGRVQYLLEEGKVLLGGMQALVLDEVDVMFLDDSFD--LSVIGAAAPAATQFLFVTATLPVAVADQISKEFPGVKKLWGPGLHKIAPQVEEVLVDCSGPMEEDRNEETAFVRKRDMLVQNLLKHQVRRSLVFCNSIPTCRKVENALRRADRSGNRWQILAYHSAVNPADREKHLGIF-SSRVERPLVMVCTDRTSRGVDFDKANVEHVVLFDFPRDPSEYVRXXXXXXXXXXXXXXT-ALVLGKQVGLARSIMEGNSKGARVHPVP 725 D FFSR++F EIG S E A++S G RPS IQ +AY VL G SCI+ +Q+GSGKTLAYL P++Q LR ++E ++ +PR VVVL PTAELA+QV R+++K +P R TGG +TQ E L +DVLI TPGR YLL+EG V L ++ +VLDEVD+++ ++SF+ L + AP TQ+LFVTATLP+ + +++ + FP + + GPG+H+ + ++EE+LVDCSG E++N ETAF K+ LV+ + + VR++++FCN I TCRKVENALRR DR ++ ++L +H+A++ R ++ F + + + +VCTDR SRG+DF ANV HVVLFD+PRDPSEYVR +GKQV LAR +ME N KG +H VP Sbjct: 245 DSGFFSRRSFKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQNLRKEEVEGLHRSSPRNPR-------VVVLTPTAELASQVLNNCRSISKSGVPFRSMVATGGFRQKTQLESLDQELDVLIATPGRFLYLLQEGFVQLNNLRCVVLDEVDILYGEESFEQVLHQLITVAPLTTQYLFVTATLPLDIYNKVVETFPDCELIMGPGVHRTSSRLEEILVDCSGDDNEEKNPETAFSNKKSALVKIIEESPVRKTIIFCNKIETCRKVENALRRVDRKASQIKVLPFHAALDQQQRIANIKEFLNKQTADSMFLVCTDRASRGIDF--ANVNHVVLFDYPRDPSEYVRRVGRTARGASGNGKAFVFAVGKQVSLARRVMERNIKGHPLHDVP 651
BLAST of NO11G01870 vs. NCBI_GenBank
Match: EEC74363.1 (hypothetical protein OsI_09674 [Oryza sativa Indica Group]) HSP 1 Score: 346.3 bits (887), Expect = 2.300e-91 Identity = 193/416 (46.39%), Postives = 270/416 (64.90%), Query Frame = 0 Query: 316 DDFFFSRKAFDEIGASAEAQAAMQSLGISRPSKIQNIAYPHVLAGTSCILAEQTGSGKTLAYLLPLLQRLR--QLEAAATAAGESPRAXXXXXXVVVLAPTAELAAQVATVARALTKH-LPLRVCCVTGGKNPRTQGEMLKSGVDVLIGTPGRVQYLLEEGKVLLGGMQALVLDEVDVMFLDDSFD--LSVIGAAAPAATQFLFVTATLPVAVADQISKEFPGVKKLWGPGLHKIAPQVEEVLVDCSGPMEEDRNEETAFVRKRDMLVQNLLKHQVRRSLVFCNSIPTCRKVENALRRADRSGNRWQILAYHSAVNPADREKHLGIF-SSRVERPLVMVCTDRTSRGVDFDKANVEHVVLFDFPRDPSEYVRXXXXXXXXXXXXXXT-ALVLGKQVGLARSIMEGNSKGARVHPVP 725 D FFSR++F EIG S E A++S G RPS IQ +AY VL G SCI+ +Q+GSGKTLAYL P++Q LR ++E ++ +PR VVVL PTAELA+QV R+++K +P R TGG +TQ E L +DVLI TPGR YLL+EG V L ++ +VLDEVD+++ ++SF+ L + AP TQ+LFVTATLP+ + +++ + FP + + GPG+H+ + ++EE+LVDCSG E++N ETAF K+ LV+ + + VR++++FCN I TCRKVENALRR DR ++ ++L +H+A++ R ++ F + + + +VCTDR SRG+DF ANV HVVLFD+PRDPSEYVR +GKQV LAR +ME N KG +H VP Sbjct: 212 DSGFFSRRSFKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQNLRKEEVEGLHRSSPRNPR-------VVVLTPTAELASQVLNNCRSISKSGVPFRSMVATGGFRQKTQLESLDQELDVLIATPGRFLYLLQEGFVQLNNLRCVVLDEVDILYGEESFEQVLHQLITVAPLTTQYLFVTATLPLDIYNKVVETFPDCELIMGPGVHRTSSRLEEILVDCSGDDNEEKNPETAFSNKKSALVKIIEESPVRKTIIFCNKIETCRKVENALRRVDRKASQIKVLPFHAALDQQQRIANIKEFLNKQTADSMFLVCTDRASRGIDF--ANVNHVVLFDYPRDPSEYVRRVGRTARGASGNGKAFVFAVGKQVSLARRVMERNIKGHPLHDVP 618
BLAST of NO11G01870 vs. NCBI_GenBank
Match: XP_015631671.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 50 [Oryza sativa Japonica Group]) HSP 1 Score: 346.3 bits (887), Expect = 2.300e-91 Identity = 193/416 (46.39%), Postives = 270/416 (64.90%), Query Frame = 0 Query: 316 DDFFFSRKAFDEIGASAEAQAAMQSLGISRPSKIQNIAYPHVLAGTSCILAEQTGSGKTLAYLLPLLQRLR--QLEAAATAAGESPRAXXXXXXVVVLAPTAELAAQVATVARALTKH-LPLRVCCVTGGKNPRTQGEMLKSGVDVLIGTPGRVQYLLEEGKVLLGGMQALVLDEVDVMFLDDSFD--LSVIGAAAPAATQFLFVTATLPVAVADQISKEFPGVKKLWGPGLHKIAPQVEEVLVDCSGPMEEDRNEETAFVRKRDMLVQNLLKHQVRRSLVFCNSIPTCRKVENALRRADRSGNRWQILAYHSAVNPADREKHLGIF-SSRVERPLVMVCTDRTSRGVDFDKANVEHVVLFDFPRDPSEYVRXXXXXXXXXXXXXXT-ALVLGKQVGLARSIMEGNSKGARVHPVP 725 D FFSR++F EIG S E A++S G RPS IQ +AY VL G SCI+ +Q+GSGKTLAYL P++Q LR ++E ++ +PR VVVL PTAELA+QV R+++K +P R TGG +TQ E L +DVLI TPGR YLL+EG V L ++ +VLDEVD+++ ++SF+ L + AP TQ+LFVTATLP+ + +++ + FP + + GPG+H+ + ++EE+LVDCSG E++N ETAF K+ LV+ + + VR++++FCN I TCRKVENALRR DR ++ ++L +H+A++ R ++ F + + + +VCTDR SRG+DF ANV HVVLFD+PRDPSEYVR +GKQV LAR +ME N KG +H VP Sbjct: 295 DSGFFSRRSFKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQNLRKEEVEGLHRSSPRNPR-------VVVLTPTAELASQVLNNCRSISKSGVPFRSMVATGGFRQKTQLESLDQELDVLIATPGRFLYLLQEGFVQLNNLRCVVLDEVDILYGEESFEQVLHQLITVAPLTTQYLFVTATLPLDIYNKVVETFPDCELIMGPGVHRTSSRLEEILVDCSGDDNEEKNPETAFSNKKSALVKIIEESPVRKTIIFCNKIETCRKVENALRRVDRKASQIKVLPFHAALDQQQRIANIKEFLNKQTADSMFLVCTDRASRGIDF--ANVNHVVLFDYPRDPSEYVRRVGRTARGASGNGKAFVFAVGKQVSLARRVMERNIKGHPLHDVP 701
BLAST of NO11G01870 vs. NCBI_GenBank
Match: XP_010694129.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 50 [Beta vulgaris subsp. vulgaris] >KMS98611.1 hypothetical protein BVRB_3g070540 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 344.4 bits (882), Expect = 8.900e-91 Identity = 196/415 (47.23%), Postives = 268/415 (64.58%), Query Frame = 0 Query: 319 FFSRKAFDEIGASAEAQAAMQSLGISRPSKIQNIAYPHVLAGTSCILAEQTGSGKTLAYLLPLLQRLRQ--LEAAATAAGESPRAXXXXXXVVVLAPTAELAAQVATVARALTKH-LPLRVCCVTGGKNPRTQGEMLKSGVDVLIGTPGRVQYLLEEGKVLLGGMQALVLDEVDVMFLDDSFD--LSVIGAAAPAATQFLFVTATLPVAVADQISKEFPGVKKLWGPGLHKIAPQVEEVLVDCSGPMEEDRNEETAFVRKRDMLVQNLLKHQVRRSLVFCNSIPTCRKVENALRRADRSGNRWQILAYHSAVNPADREKHLGIF--SSRVERPLVMVCTDRTSRGVDFDKANVEHVVLFDFPRDPSEYVRXXXXXXXXXXXXXXT-ALVLGKQVGLARSIMEGNSKGARVHPVPN 726 FFSRK+F E+G E +++ RPS IQ IAYP V+ G SCI+A+Q+GSGKTLAYL P++QRLRQ E + ++ +SPRA V+L PTAELA+QV R+++KH +P R TGG RTQ + L+ +DVLI TPGR YL++EG + L ++ VLDEVD++F D+ F+ L + AP TQ+LFVTATLPV + +++ + FP + + GPG+H+ + +EEVLVDCSG E ++ ETAF K+ L++ + V R++VFCN I TCRKVENALRR DR N+ +IL +H+A+ R ++ F + R L ++CTDR SRG+DF +V+HVVLFDFPRDPSEYVR LV+GKQV LAR I++ N KG +H VP+ Sbjct: 269 FFSRKSFRELGCCDEMIETLRAQDFVRPSHIQAIAYPPVVEGKSCIIADQSGSGKTLAYLAPVVQRLRQEETEGLSKSSSKSPRA-------VILVPTAELASQVLRNCRSISKHGVPFRSMVATGGFRQRTQLQSLEQELDVLIVTPGRFMYLIKEGFLQLTNLRCAVLDEVDILFSDEDFEQALQSLINTAPVTTQYLFVTATLPVDIYNKLVETFPDSEVVMGPGMHRTSSGLEEVLVDCSGKEESEKTPETAFANKKSALLRLAEQSPVSRTIVFCNRIETCRKVENALRRLDRKENQIRILPFHAALEQETRLTNMKEFLNPATENRSLFLICTDRASRGIDF--PSVDHVVLFDFPRDPSEYVRRVGRTARGAGGIGKAFVLVVGKQVSLARRIIDRNQKGHPLHEVPS 674 The following BLAST results are available for this feature:
BLAST of NO11G01870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G01870 ID=NO11G01870|Name=NO11G01870|organism=Nannochloropsis oceanica|type=gene|length=2599bpback to top protein sequence of NO11G01870.1 >NO11G01870.1-protein ID=NO11G01870.1-protein|Name=NO11G01870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=726bpback to top Synonyms
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