NO11G01720, NO11G01720 (gene) Nannochloropsis oceanica

Overview
NameNO11G01720
Unique NameNO11G01720
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length870
Alignment locationchr11:564472..565341 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:564472..565341 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO11G01720 vs. NCBI_GenBank
Match: EWM25025.1 (hypothetical protein Naga_100049g21 [Nannochloropsis gaditana])

HSP 1 Score: 264.2 bits (674), Expect = 4.700e-67
Identity = 155/280 (55.36%), Postives = 187/280 (66.79%), Query Frame = 0
Query:    7 LLLAFCIGLLLRQHEAVTTMMTAMASTSR----PVQDKRIRQHTCVFVKSLSFSCVRPAGGSLHL-CSTTPPEADTAPPFLMTESDLEKTTNPRPPALSSSSTSFPAGIPAQIMERVGFKDVEIRLPETFSPLERVALSAEGDLQRIISSYYNAAVSVSIKRCKEIEPGLFDREVDLSVMGRVFCTATSSLSPKTPECAHLLREKSVGLGQLFRYLRVYPTFRLLDVGREEGGTGKE---------EGGGGVWRLYELDCPAVINCRILERFAGDTFHRR 273
            L LAF + LL + + A   +   +++ S+     + D  I +H  + ++        P    LHL   TT  + D   P    ++ LE+ +    P      T+      + I ERVG KDVEIRLPE+FSPLERVALSAEGDLQRIISSY+N+AV+V IKRC EIEPG+FDREVDLSVMG VFCTATSSLS +TPECAHLLREKSVGLGQLFR+LRVYPTFRLLDVGR E   G+E         EGGGG WR+YELDCP +INCRILERF+ +TF  R
Sbjct:   12 LALAFHV-LLCQAYVATDNIARGISAISQLYKAKIDDMSICRHVHLSLRP------TPRKSRLHLQDQTTRHDTDACSP--KRDAALERQSTAFEPL---KETAMYGNFRSGISERVGSKDVEIRLPESFSPLERVALSAEGDLQRIISSYHNSAVTVRIKRCLEIEPGVFDREVDLSVMGHVFCTATSSLSARTPECAHLLREKSVGLGQLFRHLRVYPTFRLLDVGRTEVEDGEERDVEGLREREGGGGFWRVYELDCPGMINCRILERFSSNTFQFR 279          
BLAST of NO11G01720 vs. NCBI_GenBank
Match: XP_005855542.1 (hypothetical protein NGA_2037520, partial [Nannochloropsis gaditana CCMP526] >EKU20818.1 hypothetical protein NGA_2037520, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 177.6 bits (449), Expect = 5.700e-41
Identity = 95/137 (69.34%), Postives = 105/137 (76.64%), Query Frame = 0
Query:   84 TESDLEKTTNPRPPALSSSSTSFP--------AGIPAQIMERVGFKDVEIRLPETFSPLERVALSAEGDLQRIISSYYNAAVSVSIKRCKEIEPGLFDREVDLSVMGRVFCTATSSLSPKTPECAHLLREKSVGLGQ 213
            T  D +  +  R  AL   ST+F             + I ERVG KDVEIRLPE+FSPLERVALSAEGDLQRIISSY+N+AV+V IKRC EIEPG+FDREVDLSVMG VFCTATSSLS +TPECAHLLREKSVGLGQ
Sbjct:   63 TRHDTDACSPKRDAALERQSTAFEPLKETAMYGNFRSGISERVGSKDVEIRLPESFSPLERVALSAEGDLQRIISSYHNSAVTVRIKRCLEIEPGVFDREVDLSVMGHVFCTATSSLSARTPECAHLLREKSVGLGQ 199          
BLAST of NO11G01720 vs. NCBI_GenBank
Match: XP_004353197.1 (hypothetical protein ACA1_073030 [Acanthamoeba castellanii str. Neff] >ELR23669.1 hypothetical protein ACA1_073030 [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 120.2 bits (300), Expect = 1.100e-23
Identity = 73/207 (35.27%), Postives = 111/207 (53.62%), Query Frame = 0
Query:   67 LCSTTPPEADTAPPFLMTESDLEKTTNPRPPALSSSSTSFPAGIPAQIMERVGFKDVEIRLPETFSPLERVALSAEGDLQRIISSYYNAAVSVS-IKRCKEIEPGLFDREVDLSVMGRVFCTATSSLSPKTPECAHLLREKSVGLGQLFRYLRVYPTFRLLDVGREEGGTGKEEGGGGVWRLYELDCPAVINCRILERFAGDTFHRR 273
            L S   P++ T  P  +    +E    P  PA +          P    + +  +++   LP  F+ LER+ LSA G+LQR++S+YYN+ VSV  IK  +  +  +F+REV+L+  G+ FC A S+++ K  E   L+ E+ VG+GQLF +LR+ P+F LL  GR         GG  +WR Y L+  +++ C I E F  D F  R
Sbjct:    7 LISEPAPDSPTTRPNKVPR--MENNGGPFSPATTGFGGEQIERKPNHFGDILAPREITTVLPAGFTGLERIVLSANGNLQRLMSAYYNSPVSVEIIKNDRVGQTSIFEREVNLTCFGKAFCNAKSTVTIKKEEHLRLVLEEKVGIGQLFFHLRLLPSFVLLQAGR--------SGGVSLWREYRLEADSIV-CEIREEFVADLFDLR 202          
BLAST of NO11G01720 vs. NCBI_GenBank
Match: XP_014155942.1 (hypothetical protein SARC_05677 [Sphaeroforma arctica JP610] >KNC82040.1 hypothetical protein SARC_05677 [Sphaeroforma arctica JP610])

HSP 1 Score: 117.5 bits (293), Expect = 7.000e-23
Identity = 73/186 (39.25%), Postives = 100/186 (53.76%), Query Frame = 0
Query:   85 ESDLEKTTNPRPPALSSSSTSFPAGIPAQIMERVGFKDVEIRLPETFSPLERVALSAEGDLQRIISSYYNAAVSVSIKRCK-EIEPGLFDREVDLSVMGRVFCTATSSLSPKTPECAHLLREKSVGLGQLFRYLRVYPTFRLLDVGREEGGTGKEEGGGGVWRLYELDCPAVINCRILERFAGDTF 270
            E  +E T    PPA ++++    A     + + +G++     LP  F+ LER+ L+A G LQRIISSYYNA V+V I+  +   + G +DREV+L +  +VFC ATS +     E   L+    +GLGQLFR+L + P F LL VGR           GG+ R Y L  P  I CRI E F    F
Sbjct:   55 EYRMESTPLHTPPANATATALKEA---PHLGDLMGWRTTFTELPGQFTGLERIVLTANGTLQRIISSYYNAEVTVKIRHNRPRTDQGWYDREVELLIFDQVFCIATSEIHLDRKEYVDLVEINRIGLGQLFRHLNLLPFFHLLKVGRNP--------EGGLKRTYTLQSPG-ITCRITETFPRKLF 228          
BLAST of NO11G01720 vs. NCBI_GenBank
Match: KXS21723.1 (hypothetical protein M427DRAFT_130446 [Gonapodya prolifera JEL478])

HSP 1 Score: 117.5 bits (293), Expect = 7.000e-23
Identity = 67/168 (39.88%), Postives = 92/168 (54.76%), Query Frame = 0
Query:  121 KDVEIRLPETFSPLERVALSAEGDLQRIISSYYNAAVSVSIKRCKEIE--------PGL----------FDREVDLSVMGRVFCTATSSLSPKTPECAHLLREKSVGLGQLFRYLRVYPTFRLLDVGREEGGTGKEEGGGGVWRLYELDCPAVINCRILERFAGDTFH 271
            ++  + LP  FSPLER+ L+A G++QRI+S+YYN+ VSV I R ++I+        PG+          FDREV +  +G+V C A S++     EC  L+ E+ VG+GQLFRYL V P+F LL+ GR           G  WR Y L    V  C I E F    F+
Sbjct:   32 RETSLTLPPGFSPLERILLTANGNVQRILSAYYNSPVSVVIVRNRKIDGASNHVPPPGITSKPKNALAVFDREVRIECLGQVCCKAVSTVKILNDECLRLVDEQKVGIGQLFRYLNVLPSFALLNCGRST---------GQFWRDYALTSEGV-RCEIREEFPDGVFN 189          
BLAST of NO11G01720 vs. NCBI_GenBank
Match: XP_016610228.1 (hypothetical protein SPPG_02677 [Spizellomyces punctatus DAOM BR117] >KND02189.1 hypothetical protein SPPG_02677 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 113.6 bits (283), Expect = 1.000e-21
Identity = 63/170 (37.06%), Postives = 92/170 (54.12%), Query Frame = 0
Query:  110 IPAQIMERVGFKDVEIRLPETFSPLERVALSAEGDLQRIISSYYNAAVSVSIKRCKEIE---------PGLFDREVDLSVMGRVFCTATSSLSPKTPECAHLLREKSVGLGQLFRYLRVYPTFRLLDVGREEGGTGKEEGGGGVWRLYELDCPAVINCRILERFAGDTFH 271
            +P    + +  ++  + LP  FSP+ER+ L+A G++QRI+S+YYN+ VSV I   + I            +F REV+L  + ++ C A S+++   PE   L+ E+ VG+GQLFRYL + P F LL VGR              WR Y+L    V NCRI E F    F+
Sbjct:   29 VPRHFGDIMSSRETTLILPTDFSPMERILLTANGNVQRILSAYYNSTVSVDIIHNELINEESASNAETESVFRREVNLRCLNQICCNAKSTVTITDPEYLRLILEQQVGIGQLFRYLNILPEFELLQVGRTV---------NSFWREYDLRSNGV-NCRIREEFPLGVFN 188          
BLAST of NO11G01720 vs. NCBI_GenBank
Match: OZJ05833.1 (hypothetical protein BZG36_00908 [Bifiguratus adelaidae])

HSP 1 Score: 112.8 bits (281), Expect = 1.700e-21
Identity = 65/174 (37.36%), Postives = 97/174 (55.75%), Query Frame = 0
Query:  110 IPAQIMERVGFKDVEIRLPETFSPLERVALSAEGDLQRIISSYYNAAVSVSIKRCKEI-EPGLFD-----------REVDLSVMG------RVFCTATSSLSPKTPECAHLLREKSVGLGQLFRYLRVYPTFRLLDVGREEGGTGKEEGGGGVWRLYELDCPAVINCRILERFA 266
            IP+   + +  ++  +RLP+ F  LER+ L+A G+LQR++S+Y+NA +SV++   K + EP  +            REV+L + G      R  C A S++    P    L+ E+ VG+GQ+FRYL   P F L  +GR     GK++     WRLY+L CP V +C I ERFA
Sbjct:   12 IPSHFGDIMSQRETSLRLPDDFGGLERMLLTANGNLQRLLSAYFNAPISVNVLYNKVMSEPNTYGPDQTCILRGYLREVNLCINGIKGQPSRTVCNAKSAVYITDPAVLRLVEEEGVGIGQIFRYLDRLPNFELFSIGRSAPKEGKKD--YTFWRLYKLSCPGV-DCFINERFA 182          
BLAST of NO11G01720 vs. NCBI_GenBank
Match: XP_002289683.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93220.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 110.2 bits (274), Expect = 1.100e-20
Identity = 74/223 (33.18%), Postives = 100/223 (44.84%), Query Frame = 0
Query:   87 DLEKTTNPRPPALSSSSTSFPAGIPAQIMERVGFKDVEIRLPETFSPLERVALSAEGDLQRIISSYYNAAVSVSIKRC--------KEIEPG---------------------LFDREVDLSVMGRVFCTATSSLSPKTPECAHLLREKSVGLGQLFRYLRVYPTFRLLDVGREEGGTGKEEGG----------------GGVWRLYELDCPAVINCRILERF 265
            +LE   NP P  +     +   G            ++  R    F+P+ER+AL+A G+LQRI SS+Y+A V V +  C         EI+ G                     ++DR V L V  + FC ATS +  ++ EC  L+ + +VGLGQLFRYL   PTF LLD GR E    + E                  GG+WR YEL C   + C I E F
Sbjct:  105 NLEMPANPNPTTVKDGLVTKEGG------------ELNARFNCNFTPMERIALTANGNLQRIFSSFYDAPVHVHVDSCARRELSARDEIQIGFTDANGFSTEKYRTHIDEGDAVWDRVVHLYVHDKTFCRATSVIHVRSHECIRLIEDGTVGLGQLFRYLNKLPTFSLLDAGRTEYAHAESEQSISKNDSKQALQPHEFEGGMWRTYELQCEE-LTCLIHEEF 314          
BLAST of NO11G01720 vs. NCBI_GenBank
Match: GAX17646.1 (hypothetical protein FisN_18Lu312 [Fistulifera solaris])

HSP 1 Score: 109.4 bits (272), Expect = 1.900e-20
Identity = 58/135 (42.96%), Postives = 82/135 (60.74%), Query Frame = 0
Query:  132 SPLERVALSAEGDLQRIISSYYNAAVSVSIKRC--KEIEPGLFDREVDLSVMGRVFCTATSSLSPKTPECAHLLREKSVGLGQLFRYLRVYPTFRLLDVGREEGGTGKEEGGGGVWRLYELDCPAVINCRILERF 265
            +PL+R+ L+A G+LQR+I+SYY+A VSV ++ C  ++  P ++DR V L V+G  FC A S ++ +   C  L+    VGLGQLFRYL V P F L +        G +   GG+WR Y L C A + C+I E F
Sbjct:   32 NPLDRLVLTANGNLQRLIASYYDADVSVRVEGCSFRQENPRVWDRTVYLEVLGVEFCRAESEVTIQQDSCQELVASGQVGLGQLFRYLNVLPMFFLRE-------AGVDPITGGIWREYTLQCDA-LTCQIREEF 158          
BLAST of NO11G01720 vs. NCBI_GenBank
Match: OON02442.1 (hypothetical protein BSLG_07048 [Batrachochytrium salamandrivorans])

HSP 1 Score: 109.0 bits (271), Expect = 2.500e-20
Identity = 61/167 (36.53%), Postives = 90/167 (53.89%), Query Frame = 0
Query:  110 IPAQIMERVGFKDVEIRLPETFSPLERVALSAEGDLQRIISSYYNAAVSVSIKRCKEIEPGL------FDREVDLSVMGRVFCTATSSLSPKTPECAHLLREKSVGLGQLFRYLRVYPTFRLLDVGREEGGTGKEEGGGGVWRLYELDCPAVINCRILERFAGDTFH 271
            +P  + + + +K+    L   +SPLER+ L+A G+LQRI+SSY+N  V+V I R   ++  L      FDREVD+  +G++ C A S ++    +   L+  K +G+GQLFRY+ + P F LL V RE            + R Y L+    I C I E F  D FH
Sbjct:   17 LPGHLGDIMSYKETTAVLDGDYSPLERIVLTANGNLQRILSSYFNTKVTVGIVRNALVQDPLNPDMLKFDREVDIHCLGKLCCNAKSDITVSDAKYIDLIVNKGIGIGQLFRYMNILPEFELLSVCRE---------SDFLIRNYVLESHG-IRCIIKESFPNDLFH 173          
The following BLAST results are available for this feature:
BLAST of NO11G01720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25025.14.700e-6755.36hypothetical protein Naga_100049g21 [Nannochlorops... [more]
XP_005855542.15.700e-4169.34hypothetical protein NGA_2037520, partial [Nannoch... [more]
XP_004353197.11.100e-2335.27hypothetical protein ACA1_073030 [Acanthamoeba cas... [more]
XP_014155942.17.000e-2339.25hypothetical protein SARC_05677 [Sphaeroforma arct... [more]
KXS21723.17.000e-2339.88hypothetical protein M427DRAFT_130446 [Gonapodya p... [more]
XP_016610228.11.000e-2137.06hypothetical protein SPPG_02677 [Spizellomyces pun... [more]
OZJ05833.11.700e-2137.36hypothetical protein BZG36_00908 [Bifiguratus adel... [more]
XP_002289683.11.100e-2033.18predicted protein [Thalassiosira pseudonana CCMP13... [more]
GAX17646.11.900e-2042.96hypothetical protein FisN_18Lu312 [Fistulifera sol... [more]
OON02442.12.500e-2036.53hypothetical protein BSLG_07048 [Batrachochytrium ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002091NSK002091Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G01720.1NO11G01720.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|528964gene_5057Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100049g21gene5455Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G01720.1NO11G01720.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G01720 ID=NO11G01720|Name=NO11G01720|organism=Nannochloropsis oceanica|type=gene|length=870bp
ATGAGGAGGAGACCTGCGCTCCTCCTTGCGTTCTGCATCGGACTGCTTCT
TCGTCAGCATGAGGCCGTGACGACGATGATGACTGCGATGGCCTCTACCT
CTCGACCAGTCCAGGATAAAAGGATAAGGCAGCACACCTGCGTGTTCGTG
AAATCCTTGTCCTTTTCCTGTGTGCGCCCTGCCGGTGGGTCTCTCCACCT
CTGCTCCACCACTCCTCCCGAGGCCGATACCGCCCCTCCATTTCTCATGA
CAGAAAGCGACTTGGAGAAGACCACCAACCCAAGACCACCAGCATTATCG
TCTTCGAGCACCTCGTTTCCTGCTGGAATTCCCGCCCAAATCATGGAACG
CGTCGGATTTAAAGACGTCGAGATCCGGTTGCCTGAGACATTCAGTCCGC
TCGAACGCGTGGCCCTCTCCGCCGAAGGGGATTTGCAGCGAATAATTAGT
TCGTATTACAACGCTGCTGTGAGTGTGAGCATCAAACGCTGCAAGGAAAT
TGAACCAGGGCTTTTCGATCGTGAAGTGGACTTGTCTGTGATGGGTCGTG
TGTTCTGCACGGCCACAAGTAGCCTGAGTCCAAAGACGCCGGAATGTGCG
CATTTATTGCGGGAGAAGAGTGTGGGCCTTGGGCAGCTCTTTCGGTATCT
ACGTGTGTACCCAACGTTTCGTTTATTGGACGTGGGAAGGGAGGAGGGGG
GGACAGGAAAGGAGGAAGGAGGAGGGGGGGTTTGGCGGTTGTATGAATTA
GATTGTCCTGCGGTTATTAATTGTCGGATTCTTGAGAGGTTCGCGGGAGA
TACTTTTCATAGGCGGCGACGACGTTGGTCGGTGGAGGTGGGGAAGGATG
GGGTGGAAGAAGAGGGATAG
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protein sequence of NO11G01720.1

>NO11G01720.1-protein ID=NO11G01720.1-protein|Name=NO11G01720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=290bp
MRRRPALLLAFCIGLLLRQHEAVTTMMTAMASTSRPVQDKRIRQHTCVFV
KSLSFSCVRPAGGSLHLCSTTPPEADTAPPFLMTESDLEKTTNPRPPALS
SSSTSFPAGIPAQIMERVGFKDVEIRLPETFSPLERVALSAEGDLQRIIS
SYYNAAVSVSIKRCKEIEPGLFDREVDLSVMGRVFCTATSSLSPKTPECA
HLLREKSVGLGQLFRYLRVYPTFRLLDVGREEGGTGKEEGGGGVWRLYEL
DCPAVINCRILERFAGDTFHRRRRRWSVEVGKDGVEEEG*
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Synonyms
Publications