NO11G01550, NO11G01550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G01550 vs. NCBI_GenBank
Match: EWM25075.1 (atp-dependent clp protease atp-binding subunit [Nannochloropsis gaditana]) HSP 1 Score: 458.4 bits (1178), Expect = 3.500e-125 Identity = 268/342 (78.36%), Postives = 288/342 (84.21%), Query Frame = 0 Query: 56 FRVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKEQARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSEPGDMDTASGSVHRFLREEILNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDSGSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGG 398 FRVLSP+EIY+GLE++VIGQE VKTGL+V VH HYLRLYSKEQA XXXXXXXXXXXXX MT++HNG TS+L+LSEPGDMDTASGSVHRFLREEILNAASGNPSSL XXXXXXXXXX RKG+ IRL+ RR +RP PSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLV+ DATCLT AGYVGEDVES+L+KLYQAAGQD+E TERGIIYIDEIDKLSKR+SGSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNP+GEH+QIDTTDILFICGGAFAGLE VIARRVS+ASIGFGA LGG Sbjct: 54 FRVLSPREIYEGLEKYVIGQEDVKTGLAVGVHAHYLRLYSKEQA-------XXXXXXXXXXXXXRKRKHAAPALAAREGDTMTVYHNGKTSSLILSEPGDMDTASGSVHRFLREEILNAASGNPSSL--SSTXXXXXXXXXXPSSSPSFPNARKGMTIRLHHDPRRRTRPRPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVLTDATCLTQAGYVGEDVESLLFKLYQAAGQDLEATERGIIYIDEIDKLSKRESGSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPRGEHVQIDTTDILFICGGAFAGLEGVIARRVSQASIGFGASLGG 386
BLAST of NO11G01550 vs. NCBI_GenBank
Match: EWM28024.1 (atp-dependent clp protease atp-binding subunit [Nannochloropsis gaditana]) HSP 1 Score: 397.9 bits (1021), Expect = 5.600e-107 Identity = 255/481 (53.01%), Postives = 316/481 (65.70%), Query Frame = 0 Query: 56 FRVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKEQARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSEPGDMDTASGSVHRFLREEILNAASGN--PSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPA------PSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLD 527 FR+L+PK+IYQGL+E+VIGQ VK L+V VHNHY RL + +A T S+L GD+D L A G P XXXXXXXXXXXXXXXXXXXXXXXXX + + RR R + V+PVEL+K+NIL++GPTGSGKTLLAKTLA+L+DVP +IADATCLT AGYVGEDVES+LYKLY AGQD+E +RGI+YIDEIDK+S++ RDVSGEGVQQALLK++EG+VVNVPK GGRKNP+G+ IQ DT D+LFICGGAFAGLE I R+S ASIGFGA + R Q +D+VEP DLV +G++PE VGR P ++ T GL+LEQ+++V+T+PK+AL+KQY YLFA+ V FHVT AL IAA+AL K TGARGLRSILE L ++M+ +PD+ +V A+V+D Sbjct: 246 FRLLTPKQIYQGLDEYVIGQAAVKIALAVGVHNHYKRLAVQCRAPPARQQEQ---------------------------------EQSTQSSLSQELAGDIDPT------------LLATPGMHIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLREFHPSPFRRRGPRQSEGEGNVKQVDPVELDKTNILLIGPTGSGKTLLAKTLARLIDVPFIIADATCLTQAGYVGEDVESILYKLYLEAGQDLERAQRGIVYIDEIDKVSRKSENVSITRDVSGEGVQQALLKIVEGSVVNVPKEGGRKNPRGDFIQFDTNDVLFICGGAFAGLEHTITHRLSAASIGFGATV---RPKAALEGQAAQSDTYDRVEPCDLVHYGILPEFVGRFPVVVSTSGLSLEQLIRVLTEPKNALIKQYRYLFALHHVEFHVTNAALEEIAALALSKNTGARGLRSILERVLMQAMFDIPDEPQVTAIVVD 678
BLAST of NO11G01550 vs. NCBI_GenBank
Match: XP_002907124.1 (ATP-dependent Clp protease ATP-binding subunit clpX [Phytophthora infestans T30-4] >EEY63688.1 ATP-dependent Clp protease ATP-binding subunit clpX [Phytophthora infestans T30-4]) HSP 1 Score: 391.7 bits (1005), Expect = 4.000e-105 Identity = 240/512 (46.88%), Postives = 317/512 (61.91%), Query Frame = 0 Query: 57 RVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKE--QARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNL----VLSEPGDMD--TASGSVHRFLREEILNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLDVAVAGEGGEGGKAVGELTVLLLRGQDILETYL 559 RVL+P+EIY+GL E+VIGQ+ VK L+V VHNHY RL++ E QAR+ HN ++ + V + DMD S R L EEI + N + + XXXXXXXX RL H+ +E VEL+K+N++++GPTGSGKTLLAKTLA+L VP+VIADATCLT AGYVGEDVES+L+KLYQAA ++E T+RGI+YIDEIDK++++ RDVSGEGVQQALLK+LEG++VNVP+ GGRKNP+GEHI IDTT+ILFICGGAFAGLE+ + RR S++SIGFGA++ R G L + EP+DLV +G+IPE +GR P ++ T GL+ +++VQV+T+PK++L++QY LFA+ DV FH T AL +A AL K TGARGLRSI E AL E+M+ +PD +V AV +D +G +L+RG+ L+ YL Sbjct: 217 RVLTPREIYEGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKEAEAACAK-------------------------------HNASSQHPRAGGVTRQHVDMDDPRLSNIGRRLLLEEIYPGSDKNDAEMPPTSKQHASEETAEVTXXXXXXXXH----ATRLQHHSM--GDKLQYLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEHITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQMPNMRLKDSNQI----GQLLSQAEPEDLVSYGLIPEFIGRFPMLVSTTGLSKDELVQVLTEPKNSLVRQYKALFALSDVEFHATEGALEAVAESALRKNTGARGLRSIFERALMETMFDLPDMNDVRAVYVDEEA---------ILGHKRPVLIRGEMTLDEYL 678
BLAST of NO11G01550 vs. NCBI_GenBank
Match: ETI40278.1 (ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica P1569] >ETK80386.1 ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica] >ETL33811.1 ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica] >ETL87089.1 ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica] >ETO68995.1 ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica P1976] >ETP10103.1 ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica CJ01A1] >ETP38190.1 ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica P10297]) HSP 1 Score: 389.0 bits (998), Expect = 2.600e-104 Identity = 231/512 (45.12%), Postives = 309/512 (60.35%), Query Frame = 0 Query: 57 RVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKE--QARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNL----VLSEPGDMDTA--SGSVHRFLREEILNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLDVAVAGEGGEGGKAVGELTVLLLRGQDILETYL 559 RVL+P+EIY GL E+VIGQ+ VK L+V VHNHY RL++ E QAR+ HN ++ + V + DMD + S R L EEI + N + + RL H+ +E VEL+K+N++++GPTGSGKTLLAKTLA+L VP+VIADATCLT AGYVGEDVES+L+KLYQAA ++E T+RGI+YIDEIDK++++ RDVSGEGVQQALLK+LEG++VNVP+ GGRKNP+GE+I IDTT+ILFICGGAFAGLE+ + RR S++SIGFGA++ R G L + EP+DLV +G+IPE +GR P ++ T GL+ +++VQV+T+PK++L++QY LFA+ DV FH T AL +A AL K TGARGLRSI E AL E+M+ +PD +V AV +D +G +L+RG+ L+ YL Sbjct: 210 RVLTPREIYDGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKEAEAACAK-------------------------------HNASSQHPRAGGVTRQHVDMDDSRLSSIGRRLLLEEIYPGSEKNDAEVPQNSKQHASEETAEAPKTTETTHTH----ATRLQHHSL--GDKLQYLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEYITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQMPNMRLKDSDQI----GQLLSQAEPEDLVSYGLIPEFIGRFPMLVSTTGLSKDELVQVLTEPKNSLVRQYKALFALSDVEFHATEGALEAVAESALRKNTGARGLRSIFERALMETMFELPDMNDVRAVYVDEEA---------ILGRKRPVLIRGEMTLDEYL 671
BLAST of NO11G01550 vs. NCBI_GenBank
Match: ETM40261.1 (ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica]) HSP 1 Score: 389.0 bits (998), Expect = 2.600e-104 Identity = 231/512 (45.12%), Postives = 309/512 (60.35%), Query Frame = 0 Query: 57 RVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKE--QARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNL----VLSEPGDMDTA--SGSVHRFLREEILNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLDVAVAGEGGEGGKAVGELTVLLLRGQDILETYL 559 RVL+P+EIY GL E+VIGQ+ VK L+V VHNHY RL++ E QAR+ HN ++ + V + DMD + S R L EEI + N + + RL H+ +E VEL+K+N++++GPTGSGKTLLAKTLA+L VP+VIADATCLT AGYVGEDVES+L+KLYQAA ++E T+RGI+YIDEIDK++++ RDVSGEGVQQALLK+LEG++VNVP+ GGRKNP+GE+I IDTT+ILFICGGAFAGLE+ + RR S++SIGFGA++ R G L + EP+DLV +G+IPE +GR P ++ T GL+ +++VQV+T+PK++L++QY LFA+ DV FH T AL +A AL K TGARGLRSI E AL E+M+ +PD +V AV +D +G +L+RG+ L+ YL Sbjct: 214 RVLTPREIYDGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKEAEAACAK-------------------------------HNASSQHPRAGGVTRQHVDMDDSRLSSIGRRLLLEEIYPGSEKNDAEVPQNSKQHASEETAEAPKTTETTHTH----ATRLQHHSL--GDKLQYLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEYITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQMPNMRLKDSDQI----GQLLSQAEPEDLVSYGLIPEFIGRFPMLVSTTGLSKDELVQVLTEPKNSLVRQYKALFALSDVEFHATEGALEAVAESALRKNTGARGLRSIFERALMETMFELPDMNDVRAVYVDEEA---------ILGRKRPVLIRGEMTLDEYL 675
BLAST of NO11G01550 vs. NCBI_GenBank
Match: XP_008909880.1 (ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica INRA-310] >ETN04943.1 ATP-dependent Clp protease, ATP-binding subunit ClpX [Phytophthora parasitica INRA-310]) HSP 1 Score: 387.5 bits (994), Expect = 7.600e-104 Identity = 231/512 (45.12%), Postives = 308/512 (60.16%), Query Frame = 0 Query: 57 RVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKE--QARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNL----VLSEPGDMDTA--SGSVHRFLREEILNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLDVAVAGEGGEGGKAVGELTVLLLRGQDILETYL 559 RVL+P+EIY GL E+VIGQ+ VK L+V VHNHY RL++ E QAR+ HN ++ + V + DMD + S R L EEI + N + + RL H+ +E VEL+K+N++++GPTGSGKTLLAKTLA+L VP+VIADATCLT AGYVGEDVES+L+KLYQAA ++E T+RGI+YIDEIDK++++ RDVSGEGVQQALLK+LEG++VNVP+ GGRKNP+GE+I IDTT+ILFICGGAFAGLE+ + RR S++SIGFGA++ R G L + EP+DLV +G+IPE +GR P ++ T GL+ +++VQV+T+PK++L++QY LFA+ DV FH T AL +A AL K TGARGLRSI E AL E+M+ +PD +V AV +D +G +L+RG L+ YL Sbjct: 214 RVLTPREIYDGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKEAEAACAK-------------------------------HNASSQHPRAGGVTRQHVDMDDSRLSSIGRRLLLEEIYPGSEKNDAEVPQNSKQHASEETAEAPKTTETTHTH----ATRLQHHSL--GDKLQYLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEYITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQMPNMRLKDSDQI----GQLLSQAEPEDLVSYGLIPEFIGRFPMLVSTTGLSKDELVQVLTEPKNSLVRQYKALFALSDVEFHATEGALEAVAESALRKNTGARGLRSIFERALMETMFELPDMNDVRAVYVDEEA---------ILGRKRPVLIRGVMTLDEYL 675
BLAST of NO11G01550 vs. NCBI_GenBank
Match: KUF92890.1 (ATP-dependent Clp protease ATP-binding subunit ClpX [Phytophthora nicotianae] >KUG01466.1 ATP-dependent Clp protease ATP-binding subunit ClpX [Phytophthora nicotianae]) HSP 1 Score: 387.5 bits (994), Expect = 7.600e-104 Identity = 231/512 (45.12%), Postives = 308/512 (60.16%), Query Frame = 0 Query: 57 RVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKE--QARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNL----VLSEPGDMDTA--SGSVHRFLREEILNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLDVAVAGEGGEGGKAVGELTVLLLRGQDILETYL 559 RVL+P+EIY GL E+VIGQ+ VK L+V VHNHY RL++ E QAR+ HN ++ + V + DMD + S R L EEI + N + + RL H+ +E VEL+K+N++++GPTGSGKTLLAKTLA+L VP+VIADATCLT AGYVGEDVES+L+KLYQAA ++E T+RGI+YIDEIDK++++ RDVSGEGVQQALLK+LEG++VNVP+ GGRKNP+GE+I IDTT+ILFICGGAFAGLE+ + RR S++SIGFGA++ R G L + EP+DLV +G+IPE +GR P ++ T GL+ +++VQV+T+PK++L++QY LFA+ DV FH T AL +A AL K TGARGLRSI E AL E+M+ +PD +V AV +D +G +L+RG L+ YL Sbjct: 54 RVLTPREIYDGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKEAEAACAK-------------------------------HNASSQHPRAGGVTRQHVDMDDSRLSSIGRRLLLEEIYPGSEKNDAEVPQNSKQHASEETAEAPKTTETTHTH----ATRLQHHSL--GDKLQYLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEYITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQMPNMRLKDSDQI----GQLLSQAEPEDLVSYGLIPEFIGRFPMLVSTTGLSKDELVQVLTEPKNSLVRQYKALFALSDVEFHATEGALEAVAESALRKNTGARGLRSIFERALMETMFELPDMNDVRAVYVDEEA---------ILGRKRPVLIRGVMTLDEYL 515
BLAST of NO11G01550 vs. NCBI_GenBank
Match: XP_009520055.1 (hypothetical protein PHYSODRAFT_554819 [Phytophthora sojae] >EGZ24767.1 hypothetical protein PHYSODRAFT_554819 [Phytophthora sojae]) HSP 1 Score: 384.0 bits (985), Expect = 8.400e-103 Identity = 231/511 (45.21%), Postives = 304/511 (59.49%), Query Frame = 0 Query: 54 TDFRVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKE--QARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSEPGDMDTA--SGSVHRFLREEILNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLDVAVAGEGGEGGKAVGELTVLLLRGQDILETYL 559 T RVL+P+EIY+GL E+VIGQ+ VK L+V VHNHY RL++ E QAR+ G T V D+D + S R L EEI + L RL H+ +E VEL+K+N++++GPTGSGKTLLAKTLA+L VP+VIADATCLT AGYVGEDVES+L+KLYQAA ++E T+RGI+YIDEIDK++++ RDVSGEGVQQALLK+LEG++VNVP+ GGRKNP+GE+I IDTT+ILFICGGAFAGLE+ + RR S++SIGFGA++ R G L + EP+DLV +G+IPE +GR P ++ T GL+ +++VQV+T+PK++L++QY LFA+ DV FH T AL +A AL K TGARGLRSI E AL E+M+ +PD +V AV +D +G +L+RG L+ YL Sbjct: 227 TKDRVLTPREIYEGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKDAEAACAKQQHARA--------------------------GGVTRQHV-----DLDDSRLSSIGRRLLLEEIYPGLEKKEAGLEQEAKQRAAEGTSETSEAAAAAPSHAHA--TRLQHHSL--GDKLQYLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEYITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQMPNMRLKDSDQI----GQLLSQAEPEDLVSYGLIPEFIGRFPMLVSTTGLSKDELVQVLTEPKNSLVRQYKALFALSDVEFHATEGALEAVAESALSKNTGARGLRSIFERALMETMFDLPDMNDVRAVYVDEEA---------ILGRKRPVLIRGDMTLDEYL 689
BLAST of NO11G01550 vs. NCBI_GenBank
Match: XP_002895917.1 (ATP-dependent Clp protease ATP-binding subunit clpX, putative [Phytophthora infestans T30-4] >EEY54133.1 ATP-dependent Clp protease ATP-binding subunit clpX, putative [Phytophthora infestans T30-4]) HSP 1 Score: 380.9 bits (977), Expect = 7.100e-102 Identity = 235/510 (46.08%), Postives = 313/510 (61.37%), Query Frame = 0 Query: 59 LSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKE--QARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNL----VLSEPGDMD--TASGSVHRFLREEILNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLDVAVAGEGGEGGKAVGELTVLLLRGQDILETYL 559 L+ + IY+GL E+VIGQ+ VK L+V VHNHY RL++ E QAR+ HN ++ + V + DMD S R L EEI + + N + + XXXXXXXX RL H+ +E VEL+K+N++++GPTGSGKTLLAKTLA+L VP+VIADATCLT AGYVGEDVES+L+KLYQAA ++E T+RGI+YIDEIDK++++ RDVSGEGVQQALLK+LEG++VNVP+ GGRKNP+GEHI IDTT+ILFICGGAFAGLE+ + RR S++SIGFGA++ R G L + EP+DLV +G+IPE +GR P ++ T GL+ +++VQV+ +PK++L++QY LFA+ DV FH T AL +A AL K TGARGLRSI E AL E+M+ +PD +V AV +D +G +L+RG+ L+ YL Sbjct: 232 LTWRSIYEGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKEAEAACAK-------------------------------HNASSQHPRAGGVTRQHVDMDDPRLSNIGRRLLLEEIYSGSDKNDAEMPPTSKQHASEETAEVTXXXXXXXXH----ATRLQHHSM--GDKLQYLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEHITIDTTNILFICGGAFAGLEKQVTRRTSRSSIGFGAQMPNMRLKDSNQI----GQLLSQAEPEDLVSYGLIPEFIGRFPMLVSTTGLSKDELVQVLNEPKNSLVRQYKALFALSDVEFHATEGALEAVAESALRKNTGARGLRSIFERALMETMFDLPDMNDVRAVYVDEEA---------ILGHKRPVLIRGEMTLDEYL 691
BLAST of NO11G01550 vs. NCBI_GenBank
Match: OWZ10628.1 (ATP-dependent Clp protease [Phytophthora megakarya]) HSP 1 Score: 380.2 bits (975), Expect = 1.200e-101 Identity = 230/511 (45.01%), Postives = 303/511 (59.30%), Query Frame = 0 Query: 54 TDFRVLSPKEIYQGLEEHVIGQEGVKTGLSVSVHNHYLRLYSKE--QARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTIFHNGTTSNLVLSEPGDMDTA--SGSVHRFLREEILNAASGNPSSLXXXXXXXXXXXXXXXXXXXXXXXXXRKGIKIRLNQHARRHSRPAPSVEPVELEKSNILMLGPTGSGKTLLAKTLAKLLDVPLVIADATCLTSAGYVGEDVESMLYKLYQAAGQDIELTERGIIYIDEIDKLSKRDS--GSVRDVSGEGVQQALLKMLEGNVVNVPKAGGRKNPKGEHIQIDTTDILFICGGAFAGLEEVIARRVSKASIGFGAELGGGRXXXXXXXXXYQGALFDKVEPDDLVQFGVIPELVGRLPQILHTQGLTLEQMVQVVTQPKHALMKQYAYLFAMEDVSFHVTPPALRRIAAMALEKKTGARGLRSILEYALKESMYVVPDDEEVNAVVLDVAVAGEGGEGGKAVGELTVLLLRGQDILETYL 559 T RVL+P+EIY+GL E+VIGQ+ VK L+V VHNHY RL++ E QAR+ G T V DMD + S R L EEI A + RL H +E VEL+K+N++++GPTGSGKTLLAKTLA+L VP+VIADATCLT AGYVGEDVES+L+KLYQAA ++E T+RGI+YIDEIDK++++ RDVSGEGVQQALLK+LEG++VNVP+ GGRKNP+GE+I I+TT+ILFICGGAFAGLE+ + R S++SIGFGA++ R G L + EP+DLV +G+IPE +GR P ++ T GL+ E++VQV+T+P+++L++QY LFA+ DV FH T AL +A AL K TGARGLRSI E AL E+M+ +PD ++V AV +D +G +L+RG L+ YL Sbjct: 206 TKDRVLTPREIYEGLNEYVIGQDKVKKTLAVGVHNHYKRLHALELLQARKEAEAACAKHPAGTQHPRA----------------------GGVTRQHV-----DMDDSRLSSIGRRLLLEEIYPGAEKRDEASQSSKQHTSEDTAETSETPLPAHTH-----ATRLQHHTL--GDKLQYLEGVELDKTNVMLVGPTGSGKTLLAKTLARLAKVPIVIADATCLTQAGYVGEDVESVLFKLYQAANYNLEATQRGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGSMVNVPEKGGRKNPRGEYITINTTNILFICGGAFAGLEKQVTSRTSRSSIGFGAQMPNMRLKDSDQI----GQLLSQAEPEDLVSYGLIPEFIGRFPMLVSTTGLSKEELVQVLTEPRNSLVRQYKALFALSDVEFHATEGALEAVAESALRKNTGARGLRSIFERALMETMFDMPDMKDVRAVYVDEEA---------ILGRKRPVLVRGDMTLDEYL 669 The following BLAST results are available for this feature:
BLAST of NO11G01550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G01550 ID=NO11G01550|Name=NO11G01550|organism=Nannochloropsis oceanica|type=gene|length=3480bpback to top protein sequence of NO11G01550.1 >NO11G01550.1-protein ID=NO11G01550.1-protein|Name=NO11G01550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=605bpback to top Synonyms
Publications
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