NO11G01540, NO11G01540 (gene) Nannochloropsis oceanica

Overview
NameNO11G01540
Unique NameNO11G01540
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3537
Alignment locationchr11:513803..517339 -

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Properties
Property NameValue
DescriptionDNA primase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:513803..517339 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003896DNA primase activity
GO:0003677DNA binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: INTERPRO
TermDefinition
IPR013264DNA_primase_core_N
IPR006171Toprim_domain
IPR002694Znf_CHC2
Homology
BLAST of NO11G01540 vs. NCBI_GenBank
Match: XP_005855708.1 (DNA primase [Nannochloropsis gaditana CCMP526] >EKU20651.1 DNA primase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 756.5 bits (1952), Expect = 1.100e-214
Identity = 523/952 (54.94%), Postives = 629/952 (66.07%), Query Frame = 0
Query:    1 MMPATRNDLLLGVMLLLVAAVEAFQLRPPRVSANAITMGRPCSSSSSSGSFL-YTQPTTPPPTQTFRLHAAADGKDVVELVRGSVVFSDVVKQHVDLEDKGDGQWMGCCPFHDDNSPSMSVSDEKGVYHCFSCGASGDVFKFVSEKEGMSFLEAVEYLAEEGGIDIVKEGW-KGGGGGASGAIKEGHMRLHKALEAASEYYASMLGEVPGGLARTHLLEREISARLANEFTLGYSPATAGGLLQHLRPLKLTEDELVKSGLFASWSVEAMKANRAPSDRMGGRLVIPIRNARGQMVGFSGRLLHEGERSAKYINTPETPIFKKKNVLYGLERARARMRKDGVAVVVEGYFDVMALHGADVKNAVACMGTAISVDHVKALRNALPSSGGTVVLVLDGDAAGRKAAERTCLQVLLPLEVEGKMAGLHVKVAELPQGEEAKDPADLVRMYETKWGKGQAGVVFHQEVLGPAVLWKEWYARRLMAGEGDTAXXXXXXXXXXXXXXIARADAAQFSKRSEALTDFLARLPPTQQADRTFLSSLLAKEAFPENEALRERVTNDLLQQCDEKHRLFMKRELEXXXXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAP-------------------------VHGTGFKN----------DELRPRSLQAPA--APKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDEDNKAILIYEQSVLEFLIADPRALARVRDFLWAGXXXXXXXXXXXXXINSNPAVHSYQQHPQRPQELILSTHAHQVLFDWLMNIEDRRVFANSASSSSFPP---SPAAFSGGSHGIGLLKQQFEREAPAYRELLVYFDRSVARV-TPHTAENLQAILRSALKFLVEVTVARRVEEETQRWQGRLSHLD 910
            M    R   LL  +LLLVAAVEAF++  PRV   A    +     SS   +L  T      P+ +  +  AA+G ++ E +R SV  SDV+KQHVDL++KGDGQWMGCCPFHDD SPSMSVSD+KG+YHCFSCGA GD+F FVS   G+SF EA+E LA+E GID+VKEG+ +GGG GASGA KE H RLH+ALEAA EYYASML E   G ARTHL ER  SA LA++F LGY+P   GGLL+HL PLKL+ +ELVKSGLF+  S++    N +P DR+ GRL+IPIRNARGQMV F GRLL EG   AKY+NTPETP+FKK+N+L+G   ARA +R+ G A+VVEGYFDVMALHGA +++AVACMGTA++ DHVK L+NALPS GGT+VLVLD D AG++AA RTC ++LLPLE EG++ GLHVKVA+LP+G  + DP DL+R Y   WG+ QAG +F +EV+  A+LWKEWYAR LM   G+                 +R D A FS+RSEALTDFLARLP TQQADRTFL SLLA+EAFP +E LR RVT+DLLQQCDEKH  +  RE  XXXXXXXXXXXXXXXXXX XXXXXXXXX         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             PAP                         + G+ F +           + R  SL A +  +                            X     +ED+KAI IYEQS++E LIADPRA ARVRDFLW                ++   +  ++Q P   Q+L+LSTH+HQ+LFDWLM  + R    + +S  SFPP   SPA        +  LKQQFE + PA+ EL+ YFDRS+ R   PH+ ++LQ ILR AL FLV VTVARRVEEET+ WQ RL HL+
Sbjct:    1 MWSPARGGTLLARLLLLVAAVEAFRIWRPRVLNRAARGDQFRRCCSSKRHYLPSTAALALRPSSSASVQGAAEGSEMKERIRASVPLSDVIKQHVDLDEKGDGQWMGCCPFHDDKSPSMSVSDDKGLYHCFSCGAGGDIFSFVSNIGGLSFPEAMELLADEAGIDLVKEGYGQGGGKGASGATKESHARLHQALEAAGEYYASMLLEASAGPARTHLQERGFSAGLASDFGLGYAPVRPGGLLRHLGPLKLSREELVKSGLFSPRSLD----NPSPFDRLSGRLIIPIRNARGQMVAFGGRLLDEGP-LAKYLNTPETPVFKKRNLLFGAHVARAAIREKGTALVVEGYFDVMALHGAGLRHAVACMGTAVTGDHVKTLQNALPSGGGTLVLVLDRDKAGQRAAARTCRELLLPLEAEGRLGGLHVKVAQLPEG--SGDPDDLLRAYAAGWGQAQAGAMFEREVVNKAMLWKEWYARLLMEEGGEVG--VGKAGASAGGPHASRGDTAAFSRRSEALTDFLARLPATQQADRTFLCSLLAREAFPSDEPLRARVTSDLLQQCDEKHSAYKAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEPAPRLQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAQYTPLKQTGRTPAPERQGREETRSWDEHRVSRPSYTSSTLQGSAFSSPPSSFGAPGLGDARSESLHASSLISTAQGVSASRPRPPPQKAAPQATPLPSSPXPSSFNEEDSKAIFIYEQSLIELLIADPRARARVRDFLW----------------STVDGLGLHEQQPPEAQQLMLSTHSHQLLFDWLMQADAR---THRSSLLSFPPPSQSPAL------SVARLKQQFEMDVPAFPELISYFDRSLERERVPHSMDDLQRILRGALAFLVNVTVARRVEEETEFWQRRLLHLE 918          
BLAST of NO11G01540 vs. NCBI_GenBank
Match: EWM25065.1 (dna primase [Nannochloropsis gaditana])

HSP 1 Score: 755.0 bits (1948), Expect = 3.300e-214
Identity = 523/950 (55.05%), Postives = 626/950 (65.89%), Query Frame = 0
Query:    1 MMPATRNDLLLGVMLLLVAAVEAFQLRPPRVSANAITMGRPCSSSSSSGSFL-YTQPTTPPPTQTFRLHAAADGKDVVELVRGSVVFSDVVKQHVDLEDKGDGQWMGCCPFHDDNSPSMSVSDEKGVYHCFSCGASGDVFKFVSEKEGMSFLEAVEYLAEEGGIDIVKEGW-KGGGGGASGAIKEGHMRLHKALEAASEYYASMLGEVPGGLARTHLLEREISARLANEFTLGYSPATAGGLLQHLRPLKLTEDELVKSGLFASWSVEAMKANRAPSDRMGGRLVIPIRNARGQMVGFSGRLLHEGERSAKYINTPETPIFKKKNVLYGLERARARMRKDGVAVVVEGYFDVMALHGADVKNAVACMGTAISVDHVKALRNALPSSGGTVVLVLDGDAAGRKAAERTCLQVLLPLEVEGKMAGLHVKVAELPQGEEAKDPADLVRMYETKWGKGQAGVVFHQEVLGPAVLWKEWYARRLMAGEGDTAXXXXXXXXXXXXXXIARADAAQFSKRSEALTDFLARLPPTQQADRTFLSSLLAKEAFPENEALRERVTNDLLQQCDEKHRLFMKRELEXXXXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAPVHGTGFKN---DELR-------------------PRSLQAPA-------------APKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDEDNKAILIYEQSVLEFLIADPRALARVRDFLWAGXXXXXXXXXXXXXINSNPAVHSYQQHPQRPQELILSTHAHQVLFDWLMNIEDRRVFANSASSSSFPP---SPAAFSGGSHGIGLLKQQFEREAPAYRELLVYFDRSVARV-TPHTAENLQAILRSALKFLVEVTVARRVEEETQRWQGRLSHLD 910
            M    R   LL  +LLLVAAVEAF++  PRV   A    +     SS   +L  T      P+ +  +  AA+G ++ E +R SV  SDV+KQHVDL++KGDGQWMGCCPFHDD SPSMSVSD+KG+YHCFSCGA GD+F FVS   G+SF EA+E LA+E GID+VKEG+ +GGG GASGA KE H RLH+ALEAA EYYASML E   G ARTHL ER  SA LA++F LGY+P   GGLL+HL PLKL+ +ELVKSGLF+  S++    N +P DR+ GRL+IPIRNARGQMV F GRLL EG   AKY+NTPETP+FKK+N+L+G   ARA +R+ G A+VVEGYFDVMALHGA +++AVACMGTA++ DHVK L+NALPS GGT+VLVLD D AG++AA RTC ++LLPLE EG++ GLHVKVA+LP+G  + DP DL+R Y   WG+ QAG +F +EV+  A+LWKEWYAR LM   G+                 +R D A FS+RSEALTDFLARLP TQQADRTFL SLLA+EAFP +E LR RVT+DLLQQCDEKH  +  RE  XXXXXXXXXXXXXXXXXX XXXXXXXXX         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              PAP    G +    DE R                   P S  AP              +                            X     +ED+KAI IYEQS++E LIADPRA ARVRDFLW                ++   +  ++Q P   Q+L+LSTH+HQ+L DWLM  + R    + +S  SFPP   +PA+       +  LKQQFE + PA+ ELL YFDRS+ R   PH+ ++LQ ILR AL FLV VTVARRVEEET+ WQ RL HL+
Sbjct:    1 MWSPARGGTLLARLLLLVAAVEAFRIWRPRVLNRAARGDQFRRCCSSKRHYLPSTAALALRPSSSASVQGAAEGSEMKERIRASVPLSDVIKQHVDLDEKGDGQWMGCCPFHDDKSPSMSVSDDKGLYHCFSCGAGGDIFSFVSNIGGLSFPEAMELLADEAGIDLVKEGYGQGGGKGASGATKESHARLHQALEAAGEYYASMLLEASAGPARTHLQERGFSAGLASDFGLGYAPVRPGGLLRHLGPLKLSREELVKSGLFSPRSLD----NPSPFDRLSGRLIIPIRNARGQMVAFGGRLLDEGP-LAKYLNTPETPVFKKRNLLFGAHVARAAIREKGTALVVEGYFDVMALHGAGLRHAVACMGTAVTGDHVKTLQNALPSGGGTLVLVLDRDKAGQRAAARTCRELLLPLEAEGRLGGLHVKVAQLPEG--SGDPDDLLRAYAAGWGQAQAGAMFEREVVNKAMLWKEWYARLLMEEGGEVG--VGKAGASAGGPHASRGDTAAFSRRSEALTDFLARLPATQQADRTFLCSLLAREAFPSDEPLRARVTSDLLQQCDEKHSAYKAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEPAPRLQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWAQYTPLKQTGRTPAPERQGGEETRSWDEHRVSRPSYTSSTLQGSAFSSPPSSFGAPGLGDARSLHASSLISTAQGVSASRPRPPPQKAAPQATPLPSSPXPSSFNEEDSKAIFIYEQSLIELLIADPRARARVRDFLW----------------STVDGLGLHEQQPPEAQQLMLSTHSHQLLLDWLMQADAR---THRSSLLSFPPLSQNPAS------SVARLKQQFEMDVPAFPELLSYFDRSLERERVPHSMDDLQRILRGALAFLVNVTVARRVEEETEFWQRRLLHLE 916          
BLAST of NO11G01540 vs. NCBI_GenBank
Match: CBJ33512.1 (DNA primase [Ectocarpus siliculosus])

HSP 1 Score: 268.9 bits (686), Expect = 7.100e-68
Identity = 188/565 (33.27%), Postives = 271/565 (47.96%), Query Frame = 0
Query:   75 DVVELVRGSVVFSDVVKQHVDLEDKGDGQWMGCCPFHDDNSPSMSVSDEKGVYHCFSCGASGDVFKFVSEKEGMSFLEAVEYLAEEGGIDIVKEGWKGGGGGA------SGAIKEGHMRLHKALEAASEYYASMLGEVP-GGLARTHLLEREISARLANEFTLGYSPA-TAGGLLQHLRPLKLTEDELVKSGLF---ASWSVEAMKAN-RAPSDRMGGRLVIPIRNARGQMVGFSGRLLHEGERS---------------------------------------------------------------AKYINTPETPIFKKKNVLYGLERARARMRKDGVAVVVEGYFDVMALHGADVKNAVACMGTAISVDHVKALRNALPSSGGTVVLVLDGDAAGRKAAERTCLQVLLPLEVEGKMAGLHVKVAELPQGEEAKDPADLVRMYETKWGKGQAGVVFHQEVLGPAVLWKEWYARRLMAGEGDTAXXXXXXXXXXXXXXIARADAAQFSKRSEALTDFLARLP-PTQQADRTFLSSLLAKEAFPENEALRERVTNDLLQQCDEK 564
            + ++L+R S   ++V+ QHV+++  G G  +GCCPFH+D +PS SV D +G YHCF CGASGDV  F+ + +G+ F E V  LA E GI +  E    G GG         A +E   RL   L+ A+++Y   L E+P  G AR H++ER IS     +F LGYSPA     L+++L       D LV +GL    + W       + R   DR  GRLV+PIR+ RG ++GF  R L + +                                                                 AKY+N+PET +FKK   ++GL+ A+  MR +  A VVEGYFDV+ LH A ++ AV  +GTAI++D ++       S    V+L +DGDAAGR+A ER C             AG+ V VA +P+    KDPAD ++ +  +         F  +V+G AV W +WY   ++A + D A                  DA  F + ++ LT F++ L  PT   D+TF     AK     NEA+R ++  DL+   +EK
Sbjct:  186 ETLDLIRASTSITEVIGQHVEMKPAGRGM-VGCCPFHEDRTPSFSVDDSRGSYHCFGCGASGDVITFLMQIDGLGFREVVHDLAVEAGIPLGFENAADGSGGGKWDTADEKARREARERLSLVLQMAAQFYTRCLVEMPAAGGARAHIIERGISPMTVMDFQLGYSPADLTSPLIEYLDQEGFEMDTLVDAGLVPDTSKWKYRPSPNDARGRVDRFRGRLVVPIRDHRGLVIGFGARDLSDSQAQGSVGSGFVIPDVSKKGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADAGKWEKKARPPAKYLNSPETTLFKKGKNVFGLDLAKEAMRSEDTAFVVEGYFDVIKLHDAGIRCAVGVLGTAITIDQLQLCARYTKSK--RVILCMDGDAAGRRAVERLCESPASSGLDSLSEAGVSVSVATIPEDPGCKDPADFLQAHGAE--------EFRAKVMGKAVPWSDWYGDSILA-DHDFA-----------------GDANAFRRCTDRLTGFMSDLSIPT---DQTFHVHRFAKALAGGNEAMRHQLEFDLMNMSNEK 718          
BLAST of NO11G01540 vs. NCBI_GenBank
Match: WP_062201960.1 (DNA primase [Demequina salsinemoris])

HSP 1 Score: 251.5 bits (641), Expect = 1.200e-62
Identity = 143/344 (41.57%), Postives = 186/344 (54.07%), Query Frame = 0
Query:   69 AAADGKDVVELVRGSVVFSDVVKQHVDLEDKGDGQWMGCCPFHDDNSPSMSVSDEKGVYHCFSCGASGDVFKFVSEKEGMSFLEAVEYLAEEGGIDIVKEGWKGGGGGASGAIKEGHMRLHKALEAASEYYASMLGEVPGGLARTHLLEREISARLANEFTLGYSPATAGGLLQHLRPLKLTEDELVKSGLFASWSVEAMKANRAPSDRMGGRLVIPIRNARGQMVGFSGRLLHEGERSAKYINTPETPIFKKKNVLYGLERARARMRKDGVAVVVEGYFDVMALHGADVKNAVACMGTAISVDHVKALRNAL----------PSSGGTVVLVLDGDAAGRKAA 403
            A    +D +  VR      D+V QHV L+  G G   G CPFHD+ SPS  V  + G +HCF CG  GDV +FV   +G+ F+EAVEYLAE  G+ +    ++ G G           RL  A   A+E+Y S LG     + R  L ER      A  F +GY+P     L  HLR    TE EL  SGL +       + +R   DR  GRLV PIR+  G+++GF  R L + ++  KY+NTPETP++KK  VLYGL+ A++ +R +  AVVVEGY DVMA H A V NAVA  GTA   DHVK +R  +           S+G  V+   DGD AG+ AA
Sbjct:    2 AGTINRDDIAAVRERAPIEDIVSQHVTLKSAGVGSLKGLCPFHDERSPSFHVRPQAGRWHCFGCGEGGDVIEFVMRMDGLPFVEAVEYLAERAGVTL---RYEAGAGPRKEGTAGQRKRLLDAHRVAAEFYVSQLGTPEAKIGRDFLTERGFGREAAAHFGVGYAPQGWQALTDHLRRNGFTEAELRTSGLVS-------EGSRGVYDRFRGRLVWPIRDVTGEVIGFGARRLFDDDQGPKYLNTPETPLYKKAQVLYGLDLAKSSIRSERTAVVVEGYTDVMACHLAGVTNAVATCGTAFGEDHVKVVRRLMGDMAGAQLKVGSTGSKVIFTFDGDEAGQNAA 335          
BLAST of NO11G01540 vs. NCBI_GenBank
Match: WP_093376810.1 (DNA primase [Sanguibacter marinus] >SFF08992.1 DNA primase [Sanguibacter marinus])

HSP 1 Score: 251.5 bits (641), Expect = 1.200e-62
Identity = 150/344 (43.60%), Postives = 191/344 (55.52%), Query Frame = 0
Query:   74 KDVVELVRGSVVFSDVVKQHVDLEDKGDGQWMGCCPFHDDNSPSMSVSDEKGVYHCFSCGASGDVFKFVSEKEGMSFLEAVEYLAEEGGIDIVKEGWKGGGGGASGAIKEGHMRLHKALEAASEYYASMLGEVPGGLARTHLLEREISARLANEFTLGYSPATAGGLLQHLRPLKLTEDELVKSGLFASWSVEAMKANRAPSDRMGGRLVIPIRNARGQMVGFSGRLLHEGERSAKYINTPETPIFKKKNVLYGLERARARMRKDGVAVVVEGYFDVMALHGADVKNAVACMGTAISVDHVK-------------ALRNALPSSGGTVVLVLDGDAAGRKAAER 405
            ++ V+ VR      +VV  HV L+  G G   G CPFHD+ S S  V  + G +HCF C   GDV  FV + +G++F EAVEYLAE  G+ +  E   GGG   SG   + H RL +A   A+++YA  L     G ART L ER      A  F +GY+P     LL+HLR    TE EL  SGL +       + NR   DR  GRLV PIR+  G+ +GF  R L++ ++  KY+NTPETPI+KK  VLYGL+ A+  + K    VVVEGY DVMA H + V  AVA  GTA   DHV+              LR A  SSGG ++   DGDAAG+KAA R
Sbjct:    6 REDVDAVRERARIDEVVGAHVTLKPAGVGSLKGLCPFHDERSASFHVRPQVGRWHCFGCNEGGDVISFVQKIDGLAFTEAVEYLAERFGVQLRYE--DGGGPRRSGEPGQRH-RLMEAHRVAAQFYAEQLFTPGAGAARTFLAERSFDRAAAEHFGVGYAPTGWDALLKHLRGRGFTEAELTASGLVS-------QGNRGIYDRFRGRLVWPIRDVTGETIGFGARKLYDEDQGPKYLNTPETPIYKKSQVLYGLDLAKREIAKTKRIVVVEGYTDVMAAHLSGVTTAVATCGTAFGGDHVRVVRRLVGDTDAGAGLRLAGGSSGGEIIFTFDGDAAGQKAAMR 339          
BLAST of NO11G01540 vs. NCBI_GenBank
Match: WP_104162689.1 (DNA primase [Cryobacterium sp. N22])

HSP 1 Score: 251.1 bits (640), Expect = 1.500e-62
Identity = 152/367 (41.42%), Postives = 200/367 (54.50%), Query Frame = 0
Query:   77 VELVRGSVVFSDVVKQHVDLEDKGDGQWMGCCPFHDDNSPSMSVSDEKGVYHCFSCGASGDVFKFVSEKEGMSFLEAVEYLAEEGGIDIVKEGWKGGGGGASGAIKEGHMRLHKALEAASEYYASMLGEVPGGLARTHLLEREISARLANEFTLGYSPATAGGLLQHLRPLKLTEDELVKSGLFASWSVEAMKANRAPSDRMGGRLVIPIRNARGQMVGFSGRLLHEGERSAKYINTPETPIFKKKNVLYGLERARARMRKDGVAVVVEGYFDVMALHGADVKNAVACMGTAISVDHVKALRNAL--PSSGGTVVLVLDGDAAGRKAAERTCLQVLLPLEVEGKMAGLHVKVAELPQGEEAKDPADL 442
            VE V+     +D+V  +V L+  G G   G CPFHD+ SPS  V  + G YHCF CG SGDV+ F+ + + +SF EAVE LA   GI++  E     GGGA         RL+ A +AA+E++   LG     + RT L +R   A+ A  F +G++P +   L +HLR    + +EL  SGL ++        +R   DR  GRLV PIR+  GQ +GF  R L E ++  KY+NTPETPI+ K  VLYGL+ A+  + ++   VVVEGY DVMA H A V  AVA  GT+  VDH+K LR  L   S  G VV   D DAAG+KAA R           E +       VA  P+G    DP DL
Sbjct:   10 VEEVKARTNIADIVSDYVSLKSAGVGSMKGLCPFHDERSPSFHVRPQVGFYHCFGCGESGDVYSFLQKMDHVSFSEAVERLAGRAGIELHYE-----GGGAEAPDHTNRARLYAANQAAAEFFIDKLGSPGAQVGRTFLGDRGFDAQAAERFGVGFAPKSWDELTKHLRGRGFSTEELTLSGLVSA-------GDRGIYDRFRGRLVWPIRDITGQTIGFGARKLLEDDKGPKYLNTPETPIYHKAQVLYGLDLAKRDISRNHQVVVVEGYTDVMACHLAGVTTAVATCGTSFGVDHIKVLRRVLGDDSGVGEVVFTFDPDAAGQKAAVRAF--------AEEQRFSAQTFVAVAPEG---LDPCDL 353          
BLAST of NO11G01540 vs. NCBI_GenBank
Match: WP_030210918.1 (DNA primase [Streptomyces bikiniensis])

HSP 1 Score: 250.8 bits (639), Expect = 2.000e-62
Identity = 153/368 (41.58%), Postives = 198/368 (53.80%), Query Frame = 0
Query:   75 DVVELVRGSVVFSDVVKQHVDLEDKGDGQWMGCCPFHDDNSPSMSVSDEKGVYHCFSCGASGDVFKFVSEKEGMSFLEAVEYLAEEGGIDIVKEGWKGGGGGASGAIKEGHMRLHKALEAASEYYASMLGEVPGGLARTHLLEREISARLANEFTLGYSPATAGGLLQHLRPLKLTEDELVKSGLFASWSVEAMKANRAPSDRMGGRLVIPIRNARGQMVGFSGRLLHEGERSAKYINTPETPIFKKKNVLYGLERARARMRKDGVAVVVEGYFDVMALHGADVKNAVACMGTAISVDHVKALRNALPSSGGT-VVLVLDGDAAGRKAAERTCLQVLLPLEVEGKMAGLHVKVAELPQGEEAKDPADL 442
            D V+ VR +V    VV +++ L + G G   G CPFHD+ SPS  VS  KG++HCF C   GD   FV + + +SF E VE LA + GI +  E     GG   G  +   +RL +A + A+ YYA  LG     + R  L ER      A  F +GYSPA    L + LR    ++ EL+ SGL       +    R P DR  GRL+ PIR+  G++VGF  R L + +   KY+NTPETPI+KK  VLYG++ A+  + K   AVVVEGY DVMA H A V  A+A  GTA   DHVK LR  L  +G   V+   DGDAAG+KAA R         E + K A     +A  P+G    DP DL
Sbjct:    8 DDVKAVRDAVPIDAVVSEYLQLRNAGGGNLKGLCPFHDEKSPSFQVSPSKGLFHCFGCQEGGDTIAFVMKIDHLSFSETVERLAAKAGITLRYE----EGGYNPGHQRGERIRLIEAHQVAARYYADQLGSAEAEIGRAFLAERGFDQAAAEHFGVGYSPAGWDHLTRFLRGKGFSDKELILSGL-------SQDGRRGPIDRFRGRLMWPIRDVGGEIVGFGARKLRDDDNGPKYLNTPETPIYKKSQVLYGIDLAKKEIAKTSRAVVVEGYTDVMACHLAGVTTAIATCGTAFGGDHVKILRRLLMDNGSARVIFTFDGDAAGQKAALRA-------FEDDQKFAA-ETYIAVAPEG---MDPCDL 353          
BLAST of NO11G01540 vs. NCBI_GenBank
Match: WP_088456122.1 (MULTISPECIES: DNA primase [Cryobacterium] >ASD22054.1 DNA primase [Cryobacterium sp. LW097] >POH62855.1 DNA primase [Cryobacterium sp. TMN-39-1] >POH67266.1 DNA primase [Cryobacterium sp. TMN-42])

HSP 1 Score: 250.8 bits (639), Expect = 2.000e-62
Identity = 151/367 (41.14%), Postives = 200/367 (54.50%), Query Frame = 0
Query:   77 VELVRGSVVFSDVVKQHVDLEDKGDGQWMGCCPFHDDNSPSMSVSDEKGVYHCFSCGASGDVFKFVSEKEGMSFLEAVEYLAEEGGIDIVKEGWKGGGGGASGAIKEGHMRLHKALEAASEYYASMLGEVPGGLARTHLLEREISARLANEFTLGYSPATAGGLLQHLRPLKLTEDELVKSGLFASWSVEAMKANRAPSDRMGGRLVIPIRNARGQMVGFSGRLLHEGERSAKYINTPETPIFKKKNVLYGLERARARMRKDGVAVVVEGYFDVMALHGADVKNAVACMGTAISVDHVKALRNAL--PSSGGTVVLVLDGDAAGRKAAERTCLQVLLPLEVEGKMAGLHVKVAELPQGEEAKDPADL 442
            VE V+     +D++  +V L+  G G   G CPFHD+ SPS  V  + G YHCF CG SGDV+ F+ + + +SF EAVE LA   GI++  E     GGGA         RL+ A +AA+E++   LG     + RT L +R   A+ A  F +G++P +   L +HLR    + +EL  SGL ++        +R   DR  GRLV PIR+  GQ +GF  R L E ++  KY+NTPETPI+ K  VLYGL+ A+  + ++   VVVEGY DVMA H A V  AVA  GT+  VDH+K LR  L   S  G VV   D DAAG+KAA R           E +       VA  P+G    DP DL
Sbjct:   10 VEEVKSRTNIADIISDYVSLKSAGVGSMKGLCPFHDERSPSFHVRPQVGFYHCFGCGESGDVYSFLQKMDHVSFSEAVERLAGRAGIELHYE-----GGGAEAPDHTNRARLYAANQAAAEFFIDKLGSPGAQVGRTFLGDRGFDAQAAERFGVGFAPKSWDELTKHLRGRGFSTEELTLSGLVSA-------GDRGIYDRFRGRLVWPIRDITGQTIGFGARKLLEDDKGPKYLNTPETPIYHKAQVLYGLDLAKRDISRNHQVVVVEGYTDVMACHLAGVTTAVATCGTSFGVDHIKVLRRVLGDDSGVGEVVFTFDPDAAGQKAAVRAF--------AEEQRFSAQTFVAVAPEG---LDPCDL 353          
BLAST of NO11G01540 vs. NCBI_GenBank
Match: WP_073442143.1 (MULTISPECIES: DNA primase [Streptomyces] >SHK72703.1 DNA primase [Streptomyces yunnanensis] >PNE42203.1 DNA primase [Streptomyces noursei])

HSP 1 Score: 250.4 bits (638), Expect = 2.600e-62
Identity = 152/368 (41.30%), Postives = 201/368 (54.62%), Query Frame = 0
Query:   75 DVVELVRGSVVFSDVVKQHVDLEDKGDGQWMGCCPFHDDNSPSMSVSDEKGVYHCFSCGASGDVFKFVSEKEGMSFLEAVEYLAEEGGIDIVKEGWKGGGGGASGAIKEGHMRLHKALEAASEYYASMLGEVPGGLARTHLLEREISARLANEFTLGYSPATAGGLLQHLRPLKLTEDELVKSGLFASWSVEAMKANRAPSDRMGGRLVIPIRNARGQMVGFSGRLLHEGERSAKYINTPETPIFKKKNVLYGLERARARMRKDGVAVVVEGYFDVMALHGADVKNAVACMGTAISVDHVKALRNAL-PSSGGTVVLVLDGDAAGRKAAERTCLQVLLPLEVEGKMAGLHVKVAELPQGEEAKDPADL 442
            D V+ VR +V    VV +++ L + G G   G CPFHD+ SPS  VS  KG+YHCF C   GD   FV + + +SF E +E LA + GI +  E     GG   G  +    RL +A +AA++YY   L      +AR  L ER  +   A  F++GYSPA    L ++LR    T+ ELV SGL       + +  R P DR  GRL+ PIR+  G++VGF  R L + +   KY+NTPETP+++K  VLYG++ A+  + K   AVVVEGY DVMA H A +  A+A  GTA    H+K LR  L  +SG  VV   DGDAAG+KAA R         E + K A     +A  P G    DP DL
Sbjct:    8 DDVKAVRDAVPIDAVVSEYLQLRNAGGGNLKGLCPFHDEKSPSFHVSPAKGLYHCFGCQEGGDTVDFVMKIDHLSFAETIERLAAQAGITLRYE----EGGYTPGRQQGERTRLVEAHKAAAQYYTDQLESPEAEIARRFLAERGFAQDAAQHFSVGYSPAGWDHLTRYLRGRGFTDKELVLSGL-------SQEGRRGPIDRFRGRLMWPIRDIAGEVVGFGARKLRDDDNGPKYLNTPETPLYRKSQVLYGIDLAKKEIAKSSRAVVVEGYTDVMACHLAGITTAIATCGTAFGEGHIKILRRLLMDNSGSEVVFTFDGDAAGQKAALRA-------FEDDQKFAA-ETSIAITPGG---MDPCDL 353          
BLAST of NO11G01540 vs. NCBI_GenBank
Match: WP_078507957.1 (DNA primase, partial [Streptomyces sp. MspMP-M5])

HSP 1 Score: 250.4 bits (638), Expect = 2.600e-62
Identity = 154/368 (41.85%), Postives = 199/368 (54.08%), Query Frame = 0
Query:   75 DVVELVRGSVVFSDVVKQHVDLEDKGDGQWMGCCPFHDDNSPSMSVSDEKGVYHCFSCGASGDVFKFVSEKEGMSFLEAVEYLAEEGGIDIVKEGWKGGGGGASGAIKEGHMRLHKALEAASEYYASMLGEVPGGLARTHLLEREISARLANEFTLGYSPATAGGLLQHLRPLKLTEDELVKSGLFASWSVEAMKANRAPSDRMGGRLVIPIRNARGQMVGFSGRLLHEGERSAKYINTPETPIFKKKNVLYGLERARARMRKDGVAVVVEGYFDVMALHGADVKNAVACMGTAISVDHVKALRNAL-PSSGGTVVLVLDGDAAGRKAAERTCLQVLLPLEVEGKMAGLHVKVAELPQGEEAKDPADL 442
            D V+ VR +V    VV +++ L + G G   G CPFHD+ SPS  VS  KG+YHCF C   GD   FV + + +SF E +E LA + GI +  E     GG   G  +    RL +A +AA++YY   L      +ART L ER      A  F +GYSPA    L + LR    T+ ELV SGL       + +  R P DR  GRL+ PIR+  G++VGF  R L + +   KY+NTPETP+++K  VLYG++ A+  + K   AVVVEGY DVMA H A V  A+A  GTA    H+K LR  L  +SG  VV   DGDAAG+KAA R         E + K A     +A  P G    DP DL
Sbjct:    8 DDVKAVRDAVPIDAVVSEYLQLRNAGGGNLKGLCPFHDEKSPSFHVSPAKGLYHCFGCQEGGDTVDFVMKIDHLSFAETIERLAAQAGITLRYE----EGGYTPGRQQGERTRLVEAHKAAAQYYTEQLESPEAAVARTFLAERGFDQAAAGHFGVGYSPAGWDHLTRFLRGRGFTDKELVLSGL-------SQEGRRGPIDRFRGRLMWPIRDISGEVVGFGARKLRDDDNGPKYLNTPETPLYRKSQVLYGIDLAKKEIAKGNRAVVVEGYTDVMACHLAGVTTAIATCGTAFGEGHIKILRRLLMDNSGSEVVFTFDGDAAGQKAALRA-------FEDDQKFAA-ETSIAISPGG---MDPCDL 353          
The following BLAST results are available for this feature:
BLAST of NO11G01540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855708.11.100e-21454.94DNA primase [Nannochloropsis gaditana CCMP526] >EK... [more]
EWM25065.13.300e-21455.05dna primase [Nannochloropsis gaditana][more]
CBJ33512.17.100e-6833.27DNA primase [Ectocarpus siliculosus][more]
WP_062201960.11.200e-6241.57DNA primase [Demequina salsinemoris][more]
WP_093376810.11.200e-6243.60DNA primase [Sanguibacter marinus] >SFF08992.1 DNA... [more]
WP_104162689.11.500e-6241.42DNA primase [Cryobacterium sp. N22][more]
WP_030210918.12.000e-6241.58DNA primase [Streptomyces bikiniensis][more]
WP_088456122.12.000e-6241.14MULTISPECIES: DNA primase [Cryobacterium] >ASD2205... [more]
WP_073442143.12.600e-6241.30MULTISPECIES: DNA primase [Streptomyces] >SHK72703... [more]
WP_078507957.12.600e-6241.85DNA primase, partial [Streptomyces sp. MspMP-M5][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL116nonsL116Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR019ngnoR019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002111NSK002111Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G01540.1NO11G01540.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|51836gene_5037Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100098g22gene5437Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G01540.1NO11G01540.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G01540 ID=NO11G01540|Name=NO11G01540|organism=Nannochloropsis oceanica|type=gene|length=3537bp
AAATTCACAGGAAGCTTGCCCGCGGGGAGCCACGGGCCAGAAATGCCGCA
ATCCTGAAACGCACTCCTTGCTGCGAGTCTCCTCCACCCAACCATTGAAG
CGGACACGGCAGATAGCCACAAGGACAACCATGATGCCAGCGACAAGAAA
CGACCTACTGCTAGGCGTGATGCTGCTCCTTGTGGCTGCTGTCGAGGCCT
TCCAACTGCGGCCACCACGCGTGTCGGCGAACGCAATTACTATGGGCAGG
CCATGCAGTAGCAGTAGCAGCAGCGGCTCCTTCCTTTACACCCAGCCCAC
CACTCCTCCACCAACACAAACCTTCCGCCTCCACGCTGCTGCCGATGGAA
AGGATGTTGTGGAGTTGGTCCGTGGTTCAGTCGTTTTTTCTGACGTTGTC
AAGCAGCATGTAGACTTGGAGGATAAGGGAGACGGCCAATGGATGGGATG
CTGTCCTTTTCACGACGATAATAGCCCCAGCATGAGCGTCAGTGACGAGA
AAGGTGTATATCACTGCTTTTCGTGTGGGGCAAGTGGCGACGTGTTTAAA
TTTGTGTCGGAGAAGGAGGGAATGTCTTTCCTGGAAGCAGTTGAATACCT
AGCGGAGGAAGGAGGTATTGACATTGTCAAGGAAGGATGGAAAGGAGGAG
GCGGCGGGGCATCCGGCGCCATCAAGGAAGGTCACATGCGTTTGCACAAG
GCATTGGAAGCCGCGAGTGAGTATTACGCATCGATGCTTGGGGAAGTGCC
GGGTGGGCTGGCCCGCACGCACCTGCTGGAACGAGAGATAAGCGCCCGAT
TAGCAAATGAGTTCACCCTGGGCTACTCCCCGGCGACGGCAGGAGGGTTG
CTGCAGCACTTAAGGCCGTTGAAGTTGACGGAGGATGAATTGGTAAAAAG
CGGTTTGTTTGCTTCGTGGAGCGTGGAGGCCATGAAGGCGAATCGGGCGC
CTTCCGATCGGATGGGGGGGAGGTTGGTCATTCCTATTCGTAACGCCCGA
GGGCAGATGGTCGGATTCAGTGGGAGATTGTTACATGAAGGGGAGAGGAG
TGCGAAGTATATTAATACGCCAGAGACGCCGATTTTCAAGAAGAAGAATG
TATTGTATGGGCTGGAGAGGGCAAGGGCGAGAATGAGGAAGGACGGGGTG
GCTGTGGTGGTGGAAGGATACTTTGACGTGATGGCTTTGCATGGCGCGGA
TGTGAAAAATGCCGTGGCTTGTATGGGGACTGCGATAAGTGTTGATCATG
TTAAGGCTTTGAGAAATGCTCTGCCGTCGTCAGGTGGAACTGTTGTGTTG
GTCCTGGATGGGGACGCAGCAGGGAGAAAAGCTGCGGAGCGAACCTGTCT
GCAGGTGTTGTTACCTCTGGAAGTAGAAGGGAAAATGGCCGGCCTACACG
TCAAGGTCGCTGAACTTCCCCAAGGAGAAGAAGCCAAGGACCCTGCGGAT
TTAGTGAGGATGTATGAGACGAAGTGGGGGAAGGGGCAGGCAGGGGTCGT
ATTTCATCAAGAGGTCTTGGGGCCTGCGGTTCTTTGGAAGGAGTGGTATG
CGCGTCGTTTGATGGCAGGGGAGGGAGATACAGCGAGGAGAAGCAGCAGC
AGCAGCAGCAGCAGCAGCGATAGCACGATTGCTAGAGCAGACGCTGCGCA
GTTTTCAAAGAGGAGTGAGGCGCTGACTGATTTTTTGGCGCGTCTGCCCC
CCACGCAGCAGGCGGACAGGACATTCCTGAGTTCCTTGTTGGCCAAAGAA
GCTTTCCCTGAGAACGAGGCACTTAGAGAAAGAGTGACGAATGACTTGCT
CCAGCAATGTGATGAGAAACACCGTTTGTTCATGAAGAGGGAGCTGGAAC
GACAGCAGCAGCAGCAGGTCGTCAAGCAGCAGCAGCAAAGTCAACCACCG
CTACAGTCAAGGCAGTTGCAGCAGCAACCCTCGCGCTCACAACCGTCACG
CCCACAGCAGCAGCAACAACGGTCAGGGATGCTCCGACCGCTACAGCTGC
AGCAGCAGATAAGTCCTTATCCTCCCGAATGGACTCGGCAAGCTGGTGTC
CGTCATTCCCCTTCCCCTTCTTCCTCATTTTCTTCGTTCTCGTCCTCGTC
CCCGTCATCGTCCTTTCCAACCTCTCAACCAGCACCGGTGCACGGTACCG
GCTTCAAAAATGACGAATTAAGACCTCGATCCCTGCAAGCACCAGCAGCA
CCGAAAGCAGCCACAGCATCCCCTTACTCGTCCCTCCCGTCCTCCTCCTC
CTCCTCCTTTTCCTCTTCCTTTTCCTCGCCCTCGACCTCCTCCTCCTTCG
GCGACGAGGATAACAAAGCCATCCTCATCTACGAGCAGTCTGTTCTCGAG
TTTCTCATTGCTGACCCCCGGGCACTTGCGCGTGTAAGGGATTTCCTGTG
GGCTGGCAGCAGCAGCAGCGGCGGCGGCAGCAGCAGTACCAGCAACATCA
ACAGCAATCCTGCCGTCCACTCCTACCAGCAGCACCCTCAACGACCACAG
GAGCTCATTCTCTCCACGCACGCCCACCAAGTGCTGTTTGACTGGCTCAT
GAACATTGAGGACCGCCGAGTCTTCGCAAATTCCGCCTCCTCTTCGTCCT
TCCCTCCCTCCCCCGCTGCCTTCTCCGGGGGTAGCCATGGTATTGGTCTG
CTTAAACAGCAATTCGAACGGGAGGCCCCGGCGTACCGTGAGCTACTCGT
CTACTTTGATCGAAGTGTTGCCCGGGTGACTCCCCATACAGCGGAGAACC
TGCAAGCAATCCTGAGGAGTGCCTTGAAGTTTTTGGTAGAGGTCACTGTG
GCTCGACGGGTGGAAGAAGAGACGCAGAGATGGCAGGGGCGGTTGTCGCA
CTTGGATCGATTAACGGCGACCAATCAGTATGGCAGCGAACAGCAGCATC
AGTCGCAGGAACAGGAACAACAGCTGCAGCAGTATCAGCAGTATCAGCAG
TACCTGCAGCAGCAGTACGAGCAGAGCGAGCGAAGACCTTCCCCTTTCGT
TCAATCCACGTATCCGCAGCAGGGAATGTCGTTCTACCCTTCCTGGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAATACTAC
CGACAGTATCAGCAGCCGCAGCCGCAGCAGCAGCCGCAGCAGCAACCGCA
GCAGCAACAACAGCAACATCGGCAGGCACAACCCGTGGGGGGAATGCTAT
CACCAAGAGCCTACGAGACCCAGCCACGGCCGCGGTGGCCTTCAGAAATG
CGAGAAGGAGATAGAGCAGGCACAGGGGGGCCGGGGATCCCCTCATACCA
ACAGCAGCAATTACAACAGCAGCAGCCCCAGCAGCTGCCACCTCAAGCGC
AGGCCCAGCAGCAGTACCGAGGATCCCCCCCTCAGAACCGATTATGACGA
CCTCATCTCCGTGGTCCGAGGTAGAATTTAAGCATCAAGAAGACAAGCAC
GTAAACTTTTTCGTATTCTTGTAACTAACGACTTAAACGAGGAGATAAGT
CTACGCATCATGGAAAGTAATGAAATGAACACACGTA
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protein sequence of NO11G01540.1

>NO11G01540.1-protein ID=NO11G01540.1-protein|Name=NO11G01540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1089bp
MMPATRNDLLLGVMLLLVAAVEAFQLRPPRVSANAITMGRPCSSSSSSGS
FLYTQPTTPPPTQTFRLHAAADGKDVVELVRGSVVFSDVVKQHVDLEDKG
DGQWMGCCPFHDDNSPSMSVSDEKGVYHCFSCGASGDVFKFVSEKEGMSF
LEAVEYLAEEGGIDIVKEGWKGGGGGASGAIKEGHMRLHKALEAASEYYA
SMLGEVPGGLARTHLLEREISARLANEFTLGYSPATAGGLLQHLRPLKLT
EDELVKSGLFASWSVEAMKANRAPSDRMGGRLVIPIRNARGQMVGFSGRL
LHEGERSAKYINTPETPIFKKKNVLYGLERARARMRKDGVAVVVEGYFDV
MALHGADVKNAVACMGTAISVDHVKALRNALPSSGGTVVLVLDGDAAGRK
AAERTCLQVLLPLEVEGKMAGLHVKVAELPQGEEAKDPADLVRMYETKWG
KGQAGVVFHQEVLGPAVLWKEWYARRLMAGEGDTARRSSSSSSSSSDSTI
ARADAAQFSKRSEALTDFLARLPPTQQADRTFLSSLLAKEAFPENEALRE
RVTNDLLQQCDEKHRLFMKRELERQQQQQVVKQQQQSQPPLQSRQLQQQP
SRSQPSRPQQQQQRSGMLRPLQLQQQISPYPPEWTRQAGVRHSPSPSSSF
SSFSSSSPSSSFPTSQPAPVHGTGFKNDELRPRSLQAPAAPKAATASPYS
SLPSSSSSSFSSSFSSPSTSSSFGDEDNKAILIYEQSVLEFLIADPRALA
RVRDFLWAGSSSSGGGSSSTSNINSNPAVHSYQQHPQRPQELILSTHAHQ
VLFDWLMNIEDRRVFANSASSSSFPPSPAAFSGGSHGIGLLKQQFEREAP
AYRELLVYFDRSVARVTPHTAENLQAILRSALKFLVEVTVARRVEEETQR
WQGRLSHLDRLTATNQYGSEQQHQSQEQEQQLQQYQQYQQYLQQQYEQSE
RRPSPFVQSTYPQQGMSFYPSWQQQQQQQQQQQQQQQQYYRQYQQPQPQQ
QPQQQPQQQQQQHRQAQPVGGMLSPRAYETQPRPRWPSEMREGDRAGTGG
PGIPSYQQQQLQQQQPQQLPPQAQAQQQYRGSPPQNRL*
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Synonyms
Publications