NO11G01340, NO11G01340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G01340 vs. NCBI_GenBank
Match: EWM25084.1 (adp-ribosylation factor gtpase-activating, partial [Nannochloropsis gaditana]) HSP 1 Score: 347.8 bits (891), Expect = 1.400e-91 Identity = 220/475 (46.32%), Postives = 259/475 (54.53%), Query Frame = 0 Query: 817 ALAKGGRVYVRPEGGIGRWRSAIIIRFHKTRSPVNGKHLLKVQYRDGTVEEYVDIDDI--APTRRGAPEVVVTAEGKGGGAEVGETITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKYSAAVDRFSFPSSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREYTVVFKDGPLGFTLSKVEGGRAVVTKVAPAGQAVLGGVRLGDALVSLDHQELILYDAIMARFPFLPRPLVVGFRKKMEGLGYEGARKGGTEGAFIERGRAAGVG---TGEGGKAFAGGFGKSMQVLQR----GTNAVLAKS-------SSNSSGSRPVGGGCGLTTKICLRDQPGTGEFDTCFSEGPLGMRLEEMAVTSRERGLMYVCQVLQVTPGGAAEKEGVVDGCVVVGVNGERFISHAHTVATLRYGKRPVVVRFRMP 1276 A AKGGRV+ G GRWRSA +IRFH+ RSP+ G+HLLK++YRDG+VEEYVD +D+ A +RG+ A + +RKY+A S SP REY+VVF +GP+G TLSKVEGGRA+VT VAPAGQAVLGGVR+GDALVSLDHQ + LYD +MAR P LPRPLVVGFR++MEG+ G+ +G G R G G +G GGKAFAGGFGKS+QVL R G A S P+GGG GLTTK+ L + P GEFD CF+EGPLGMRLEEM +TSRE GL YVCQVLQVT GGAAE +GV DGC VVGVNGERFISHAHTVATL++GKRPV+VRFR+P Sbjct: 13 APAKGGRVFALQ--GDGRWRSATVIRFHRARSPLTGRHLLKLRYRDGSVEEYVDAEDVCLARPQRGSANSPSLASXXXXXXXXXXXL----------------------------------------------PTQASLWKASLERVSAPTQRRDRREELSRKYAAGA---SPSHSPAEGGFSPPWPPTGPPSSSRQRPSSIPAPEHSGQAREYSVVFGEGPMGLTLSKVEGGRALVTSVAPAGQAVLGGVRVGDALVSLDHQAMALYDLVMARLPSLPRPLVVGFRRRMEGM---GSTEGAVGGPRAPGPRWLGSGASLSGSGGKAFAGGFGKSLQVLTRHASLGPGAAAVPSLXXXXXXXXXXXXXXPLGGGSGLTTKVPLTEDPDAGEFDACFAEGPLGMRLEEMPLTSREGGLKYVCQVLQVTSGGAAESKGVRDGCCVVGVNGERFISHAHTVATLKHGKRPVLVRFRLP 433
BLAST of NO11G01340 vs. NCBI_GenBank
Match: XP_005852734.1 (hypothetical protein NGA_0631820 [Nannochloropsis gaditana CCMP526] >EKU23096.1 hypothetical protein NGA_0631820 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 265.4 bits (677), Expect = 9.200e-67 Identity = 124/138 (89.86%), Postives = 134/138 (97.10%), Query Frame = 0 Query: 1 MSAAAALRAEGPFPPDVLVEVKSNPGNNQCCDCGSFDTEWASVTYGVLICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVYAMRLGSNFQMQEFFRRQRISNTDIRVKYQSKAASVYRSTLSEAVEKGWEVDWESRKA 139 MSA AALRAEGPFPPD+L+E+K++PGNNQCCDCGSFDTEWASVTYG+LICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQV+AMRLGSNFQMQEFFRRQRISNTDIRV+YQSKAA VYRSTL+EAVEKGWE DWE R+A Sbjct: 1 MSALAALRAEGPFPPDILLEIKNSPGNNQCCDCGSFDTEWASVTYGILICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVFAMRLGSNFQMQEFFRRQRISNTDIRVRYQSKAAGVYRSTLAEAVEKGWESDWEQRRA 138
BLAST of NO11G01340 vs. NCBI_GenBank
Match: EWM25072.1 (adp-ribosylation factor gtpase-activating [Nannochloropsis gaditana]) HSP 1 Score: 252.3 bits (643), Expect = 8.100e-63 Identity = 118/130 (90.77%), Postives = 128/130 (98.46%), Query Frame = 0 Query: 1 MSAAAALRAEGPFPPDVLVEVKSNPGNNQCCDCGSFDTEWASVTYGVLICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVYAMRLGSNFQMQEFFRRQRISNTDIRVKYQSKAASVYRSTLSEAVEKGWE 131 MSA AALRAEGPFPPD+L+E+K++PGNNQCCDCGSFDTEWASVTYG+LICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQV+AMRLGSNFQMQEFFRRQRISNTDIRV+YQSKAA VYRSTL+EAVEKGW+ Sbjct: 1 MSALAALRAEGPFPPDILLEIKNSPGNNQCCDCGSFDTEWASVTYGILICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVFAMRLGSNFQMQEFFRRQRISNTDIRVRYQSKAAGVYRSTLAEAVEKGWD 130
BLAST of NO11G01340 vs. NCBI_GenBank
Match: CBJ27924.1 (ADP-ribosylation factor GTPase-activating protein, putative [Ectocarpus siliculosus]) HSP 1 Score: 133.3 bits (334), Expect = 5.500e-27 Identity = 110/300 (36.67%), Postives = 142/300 (47.33%), Query Frame = 0 Query: 1026 REYTVVFKDGPLGFTLSKVEGGRAVVTKVAPAGQAVLGGVRLGDALVSLDHQELILYDAIMARFPFLPRPLVVGFRKKMEGLGY-EGARKGGTEG-------AFIERGRAAGVGTGEGGKAFAGGFGKSMQVLQRGTNAVLAKSSSNSSGSRP--------------------VGGGCG-------------------LTTKICLRDQPG--TGEFDTCFSEGPLGMRLEEMAVTSRERGLMYVCQ-VLQVTPGGAAEKEGVVDGCVVVGVNGERFISHAHTVATLRYGKRPVVVRFRMP 1276 R +TVVF G +G TL+K G VTKV P G A GV LG + +++ Q Y+ MA PRP+ + F G G G R G G + + G AA +G + A A +G L T VLA + S+ +G P V GG G ++TK L D PG GEFD F EG LGMRLE ERG V+++T GG A GV +GC VVG+NGE+++SHAHTVATL++ +RPVVVRFR+P Sbjct: 773 RGHTVVFPAGGMGLTLTKEMSGGCSVTKVVPGGVADSRGVALGQRVCAVNGQPSGTYEHTMAVIGGSPRPISITFVMPSTGGGSGNGGRFSGVGGGPPVVQHTWADVGLAATIGAMDAANAVAVEWG-----LGANTPGVLAGAHSSGAGDIPPAPQGFRVHQKHSLMAIPTGVAGGFGNSLAKHRTFAVDVSPDMATMSTKKALSDAPGEEVGEFDVRFGEGELGMRLE-------ERGSFKASSVVVKITEGGQAVSLGVREGCKVVGINGEKYLSHAHTVATLKHARRPVVVRFRLP 1060 HSP 2 Score: 112.1 bits (279), Expect = 1.300e-20 Identity = 99/291 (34.02%), Postives = 139/291 (47.77%), Query Frame = 0 Query: 32 DCGSFDTEWASVTYGVLICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVYAMRLGSNFQMQEFFRRQRISNTDIRVKYQSKAASVYRSTLSEAVEKGWEVDWESRKAXXXXXXXXXXXXXXXXXXXKSVSLVSPPRKHSSFHGLGAGNXXXXXXXXXXXXVGRRNEISXXXXXXXXXXXXXXXXXXXXXXXPPLHLPSAVGNE--------GDEEFVEVRVEGEESIGISIQKDLPTGHARVYRVTLASPAYRAGVQTGDTLVGLSNRRLEEYDELMALIPNMGRPLTLVF 315 DCG+ +T W TYG+L+C++C+G HRSLG ++ ++SL++D W QV M LG N Q+Q +F + + N+ + +KY++KAA++YR L A ++ + XXXXXXXXXXXX XX XXXXXX + VG+ G EE EV V G +G ++ KD A V R+ A+R GV+TGD LVG+ RRL +YD+LM L+P RPL L+F Sbjct: 2 DCGAPETSWGGPTYGILLCVKCAGRHRSLGTHLTVIKSLAMDRWDAGQVRRMELGGNGQLQAWFTKCQTENSALEMKYRTKAATLYRENLRVAADEDLASGGGQAAGELQGAPGSRKGRIFAAAERAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVPVAARHDPPSAHAXXXXXXXXXXXAATVGSGMEEYARRCGREEEYEV-VFGPGGMGFTLMKD-AVSRALVTRLAPGGMAFRLGVRTGDYLVGVDGRRLHDYDQLMLLLPRTPRPLRLLF 290
BLAST of NO11G01340 vs. NCBI_GenBank
Match: OAO14898.1 (ADP-ribosylation factor GTPase-activating protein [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 126.3 bits (316), Expect = 6.700e-25 Identity = 58/119 (48.74%), Postives = 86/119 (72.27%), Query Frame = 0 Query: 14 PPDVLVEVKSNPGNNQCCDCGSFDTEWASVTYGVLICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVYAMRLGSNFQMQEFFRRQRIS-NTDIRVKYQSKAASVYRSTLSEAVEKGWEV 132 PP+V+ EV+S PGN++C DCG+ + EWASVTYG LIC++C+G HR LGV +S+VRSL +DSW ++ M+ G N ++ +FF+R I + I +KY +K A +YR T+ +A+ +G EV Sbjct: 5 PPEVVAEVRSLPGNDRCADCGAENPEWASVTYGSLICVKCAGLHRGLGVHISYVRSLEMDSWEESEIKMMKAGGNQRLLDFFKRHNIERDAPISLKYNTKTAELYR-TILKAIVEGTEV 122
BLAST of NO11G01340 vs. NCBI_GenBank
Match: XP_012893941.1 (uncharacterized protein [Blastocystis hominis] >CBK19893.2 unnamed protein product [Blastocystis hominis]) HSP 1 Score: 125.2 bits (313), Expect = 1.500e-24 Identity = 54/114 (47.37%), Postives = 82/114 (71.93%), Query Frame = 0 Query: 14 PPDVLVEVKSNPGNNQCCDCGSFDTEWASVTYGVLICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVYAMRLGSNFQMQEFFRRQRI-SNTDIRVKYQSKAASVYRSTLSEAVE 127 P DVL+E++ PGN+ C DCG+ +WASV+YG+ +CL CSG HR LGV +SFVRS+ +DSWT +++ AM++G N QM +F + + N+ I+ KY S+AA++YR ++ +E Sbjct: 2 PSDVLLELRKLPGNDVCADCGAARPQWASVSYGIFVCLECSGQHRGLGVHLSFVRSVQMDSWTEREIKAMQVGGNKQMNDFLQEHGVPKNSSIKKKYNSRAAALYREVIAAKIE 115
BLAST of NO11G01340 vs. NCBI_GenBank
Match: OAO13342.1 (ARF-GAP protein [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 120.9 bits (302), Expect = 2.800e-23 Identity = 57/114 (50.00%), Postives = 74/114 (64.91%), Query Frame = 0 Query: 14 PPDVLVEVKSNPGNNQCCDCGSFDTEWASVTYGVLICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVYAMRLGSNFQMQEFFRRQRI-SNTDIRVKYQSKAASVYRSTLSEAVE 127 P +V E++ PGNN C DCG+ +WASVTYG ICL CSG HR LGV +SFVRS +DSW+ K++ AMR+G N + +FF + I N I+ KY S AA +YR + VE Sbjct: 5 PIEVYNELRQLPGNNVCADCGAARPQWASVTYGTFICLECSGKHRGLGVHISFVRSAQMDSWSEKEIQAMRVGGNQNLNDFFAKYNIPKNATIKQKYNSPAAELYREIIKAKVE 118
BLAST of NO11G01340 vs. NCBI_GenBank
Match: XP_014526150.1 (hypothetical protein JH06_3736 [Blastocystis sp. subtype 4] >KNB42707.1 hypothetical protein JH06_3736 [Blastocystis sp. subtype 4]) HSP 1 Score: 120.2 bits (300), Expect = 4.800e-23 Identity = 56/117 (47.86%), Postives = 82/117 (70.09%), Query Frame = 0 Query: 16 DVLVEVKSNPGNNQCCDCGSFDTEWASVTYGVLICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVYAMRLGSNFQMQEFFRRQRI-SNTDIRVKYQSKAASVYRSTLSEAVEKGWEV 132 +++ E+K+ PGN++C DCG WAS++YG LICL+CSG HR LGV +SFVRSL LD+W+ ++ AM++G N QM +FF + I S + VKY ++ A++YRS + V+ G EV Sbjct: 7 EIMEEIKALPGNDRCADCGEEKPVWASISYGSLICLKCSGLHRGLGVHLSFVRSLELDTWSENEIKAMKMGGNKQMIDFFEKHNIPSEVPVSVKYTTETATLYRSIIKAKVD-GTEV 122
BLAST of NO11G01340 vs. NCBI_GenBank
Match: XP_012895400.1 (uncharacterized protein [Blastocystis hominis] >CBK21352.2 unnamed protein product [Blastocystis hominis]) HSP 1 Score: 119.0 bits (297), Expect = 1.100e-22 Identity = 56/106 (52.83%), Postives = 74/106 (69.81%), Query Frame = 0 Query: 14 PPDVLVEVKSNPGNNQCCDCGSFDTEWASVTYGVLICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVYAMRLGSNFQMQEFFRRQRISN-TDIRVKYQSKAASVYR 119 P +VL E+++ PGNN C DCG+ +WASV+YG ICL CSG HR LGV +SFVRS+ +DSWT ++ AM++G N ++ FF ISN IR KY S AA++YR Sbjct: 2 PNEVLAELRALPGNNVCVDCGASRPQWASVSYGTFICLECSGKHRGLGVHLSFVRSVQMDSWTEDEIKAMQVGGNQSLRSFFEEHGISNDATIREKYSSPAAALYR 107
BLAST of NO11G01340 vs. NCBI_GenBank
Match: OMJ94854.1 (hypothetical protein SteCoe_1880 [Stentor coeruleus]) HSP 1 Score: 119.0 bits (297), Expect = 1.100e-22 Identity = 54/111 (48.65%), Postives = 75/111 (67.57%), Query Frame = 0 Query: 16 DVLVEVKSNPGNNQCCDCGSFDTEWASVTYGVLICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVYAMRLGSNFQMQEFFRRQRISNTDIRVKYQSKAASVYRSTLSEAVE 127 DVL E+K P NN C +CG D++W+SV G+ +CL+C+G HR LGV VSFVRS+S+D+W KQ+ M+LG N ++EFF ++ D VKY++KAA YR L + E Sbjct: 5 DVLRELKMIPENNCCFECGDQDSDWSSVNNGIFLCLKCAGLHRGLGVHVSFVRSVSMDTWQEKQIKLMQLGGNTALKEFFASYGLNELDASVKYKTKAAEYYREMLKQKAE 115 The following BLAST results are available for this feature:
BLAST of NO11G01340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G01340 ID=NO11G01340|Name=NO11G01340|organism=Nannochloropsis oceanica|type=gene|length=4681bpback to top protein sequence of NO11G01340.1 >NO11G01340.1-protein ID=NO11G01340.1-protein|Name=NO11G01340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1277bpback to top Synonyms
Publications
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