NO11G01180, NO11G01180 (gene) Nannochloropsis oceanica

Overview
NameNO11G01180
Unique NameNO11G01180
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2855
Alignment locationchr11:423795..426649 -

Link to JBrowse

Properties
Property NameValue
DescriptionNLI interacting factor
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:423795..426649 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036412HAD-like_sf
IPR004274NIF
Homology
[Close]
BLAST of NO11G01180 vs. NCBI_GenBank
Match: NP_001340293.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Zea mays] >AQK62770.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Zea mays])

HSP 1 Score: 148.3 bits (373), Expect = 4.000e-32
Identity = 88/216 (40.74%), Postives = 120/216 (55.56%), Query Frame = 0 
Query:   42 KLLVLDLNGLLVH-RVFTGEGPRADAEGPLPTVTTTWRLRNFWVYKRPYVEDFLRFCLDNFFVGVWTTASAANATSLLEGLLSPENIDKLVFLWDGKKCSYNGEMDPIKSGKPMAFKELRRLWESRE-----VAGLFGPNNTLLIDDSHYKASLNPPHTAIHPAAWDDPDAHADDDALGPNGSIRAYLEALTLAEGPIPEFVRTTPF-ETFIRVRD 251
            KLL+LDLNGLLV           ADA           ++R   V++RPY +DFL FC  NF +G+W++    N  S++  ++S E    L+F WD  KC++ G        KP+  KELR+LW   E       G + P+NTLL+DDS YKA  NPPHTAI P ++     + +DD+LGPNG +R YL+ L  A+  +  FVR  PF + FI   D
Sbjct:  426 KLLILDLNGLLVDINEDYHNAHMADA-----------KVRRKLVFRRPYCDDFLNFCALNFELGIWSSRKKENVDSVVNIVMS-EFKPHLLFCWDMSKCTFTGHKTLENKHKPLVLKELRKLWNVEEQDLPWEVGDYSPSNTLLVDDSPYKALRNPPHTAIFPHSYS--YLNWNDDSLGPNGDLRVYLQNLAAADN-VQHFVRDNPFGQPFITESD 626
[Close]
BLAST of NO11G01180 vs. NCBI_GenBank
Match: XP_020577178.1 (uncharacterized protein LOC110022529 isoform X2 [Phalaenopsis equestris])

HSP 1 Score: 147.9 bits (372), Expect = 5.300e-32
Identity = 93/237 (39.24%), Postives = 123/237 (51.90%), Query Frame = 0 
Query:   11 DNRERENQEIALLRHEVARLRRHVPACRRIPKLLVLDLNGLLVHRVFTGEGPRADAEGPLPTVTTTWRLRNFWVYKRPYVEDFLRFCLDNFFVGVWTTASAANATSLLEGLLSPENIDKLVFLWDGKKCSYNGEMDPIKSGKPMAFKELRRLWESRE-----VAGLFGPNNTLLIDDSHYKASLNPPHTAIHPAAWDDPDAHADDDALGPNGSIRAYLEALTLAEGPIPEFVRTTPF 243
            + +E+E QEI  +  E     R V    R  KLLVLDLNGLL   V                     ++    ++KRP+ +DFL+FC DNF +G+W++    N  S L+ L+  E   KL+F WD  KC+Y G        KP+  KEL++LW   E       G F P+NTLL+DDS YKA  NPPHTAI P  +   D    D++LGP G +R YLE L L+   +  FV   PF
Sbjct:  430 EEKEKEVQEIGSMPPE-----RLVTGGAR-KKLLVLDLNGLLCDIV----------NDYYSNYRVEKKIGGKPIFKRPFCDDFLKFCFDNFHIGIWSSRRKYNVDSALDYLMG-EYKHKLLFCWDQSKCTYTGARTIENHHKPLVLKELKKLWNKEESDLPWEKGDFSPSNTLLLDDSPYKALCNPPHTAIFPYPFQYTDER--DNSLGPGGDVRVYLEQL-LSSDDVQRFVEDHPF 646
[Close]
BLAST of NO11G01180 vs. NCBI_GenBank
Match: XP_020577179.1 (uncharacterized protein LOC110022529 isoform X3 [Phalaenopsis equestris])

HSP 1 Score: 147.9 bits (372), Expect = 5.300e-32
Identity = 93/237 (39.24%), Postives = 123/237 (51.90%), Query Frame = 0 
Query:   11 DNRERENQEIALLRHEVARLRRHVPACRRIPKLLVLDLNGLLVHRVFTGEGPRADAEGPLPTVTTTWRLRNFWVYKRPYVEDFLRFCLDNFFVGVWTTASAANATSLLEGLLSPENIDKLVFLWDGKKCSYNGEMDPIKSGKPMAFKELRRLWESRE-----VAGLFGPNNTLLIDDSHYKASLNPPHTAIHPAAWDDPDAHADDDALGPNGSIRAYLEALTLAEGPIPEFVRTTPF 243
            + +E+E QEI  +  E     R V    R  KLLVLDLNGLL   V                     ++    ++KRP+ +DFL+FC DNF +G+W++    N  S L+ L+  E   KL+F WD  KC+Y G        KP+  KEL++LW   E       G F P+NTLL+DDS YKA  NPPHTAI P  +   D    D++LGP G +R YLE L L+   +  FV   PF
Sbjct:  396 EEKEKEVQEIGSMPPE-----RLVTGGAR-KKLLVLDLNGLLCDIV----------NDYYSNYRVEKKIGGKPIFKRPFCDDFLKFCFDNFHIGIWSSRRKYNVDSALDYLMG-EYKHKLLFCWDQSKCTYTGARTIENHHKPLVLKELKKLWNKEESDLPWEKGDFSPSNTLLLDDSPYKALCNPPHTAIFPYPFQYTDER--DNSLGPGGDVRVYLEQL-LSSDDVQRFVEDHPF 612
[Close]
BLAST of NO11G01180 vs. NCBI_GenBank
Match: XP_020577177.1 (uncharacterized protein LOC110022529 isoform X1 [Phalaenopsis equestris])

HSP 1 Score: 147.9 bits (372), Expect = 5.300e-32
Identity = 93/237 (39.24%), Postives = 123/237 (51.90%), Query Frame = 0 
Query:   11 DNRERENQEIALLRHEVARLRRHVPACRRIPKLLVLDLNGLLVHRVFTGEGPRADAEGPLPTVTTTWRLRNFWVYKRPYVEDFLRFCLDNFFVGVWTTASAANATSLLEGLLSPENIDKLVFLWDGKKCSYNGEMDPIKSGKPMAFKELRRLWESRE-----VAGLFGPNNTLLIDDSHYKASLNPPHTAIHPAAWDDPDAHADDDALGPNGSIRAYLEALTLAEGPIPEFVRTTPF 243
            + +E+E QEI  +  E     R V    R  KLLVLDLNGLL   V                     ++    ++KRP+ +DFL+FC DNF +G+W++    N  S L+ L+  E   KL+F WD  KC+Y G        KP+  KEL++LW   E       G F P+NTLL+DDS YKA  NPPHTAI P  +   D    D++LGP G +R YLE L L+   +  FV   PF
Sbjct:  431 EEKEKEVQEIGSMPPE-----RLVTGGAR-KKLLVLDLNGLLCDIV----------NDYYSNYRVEKKIGGKPIFKRPFCDDFLKFCFDNFHIGIWSSRRKYNVDSALDYLMG-EYKHKLLFCWDQSKCTYTGARTIENHHKPLVLKELKKLWNKEESDLPWEKGDFSPSNTLLLDDSPYKALCNPPHTAIFPYPFQYTDER--DNSLGPGGDVRVYLEQL-LSSDDVQRFVEDHPF 647
[Close]
BLAST of NO11G01180 vs. NCBI_GenBank
Match: XP_007032780.1 (PREDICTED: uncharacterized FCP1 homology domain-containing protein C1271.03c isoform X1 [Theobroma cacao] >XP_007032782.1 PREDICTED: uncharacterized FCP1 homology domain-containing protein C1271.03c isoform X1 [Theobroma cacao] >EOY03706.1 Haloacid dehalogenase-like hydrolase superfamily protein, putative isoform 1 [Theobroma cacao] >EOY03707.1 Haloacid dehalogenase-like hydrolase superfamily protein, putative isoform 1 [Theobroma cacao] >EOY03708.1 Haloacid dehalogenase-like hydrolase superfamily protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 147.5 bits (371), Expect = 6.900e-32
Identity = 87/238 (36.55%), Postives = 127/238 (53.36%), Query Frame = 0 
Query:   10 WDNRERENQEIALLRHEVARLRRHVPACRRIPKLLVLDLNGLLVHRVFTGEGPRADAEGPLPTVTTTWRLRNFWVYKRPYVEDFLRFCLDNFFVGVWTTASAANATSLLEGLLSPENIDKLVFLWDGKKCSYNGEMDPIKSGKPMAFKELRRLWESRE-----VAGLFGPNNTLLIDDSHYKASLNPPHTAIHPAAWDDPDAHADDDALGPNGSIRAYLEALTLAEGPIPEFVRTTPF 243
            +D +ER++  +A++   V++LR          KLLVLDLNGLL   V+           P  T      +    ++KRP+ +DFLRFC   F VG+W++    N    L  L+  +   KL+F WD   C+      P    KP+ FKE+R++WE  +       G +  +NTLLIDDS YKA LNPPHTAI P ++      ++D++LG  G +RAYLE L L++  +  F+   PF
Sbjct:   99 YDTKERKDVSLAIITPPVSQLRN---------KLLVLDLNGLLADIVYQ----------PPKTFKADAYIGGRAIFKRPFCDDFLRFCFQRFEVGIWSSRLRKNVARFLNYLME-DMKHKLLFCWDSSHCTATQFNTPGYKYKPLVFKEMRKIWEKHDPDLPWEKGYYNESNTLLIDDSPYKALLNPPHTAIFPYSF---KFDSNDNSLGAEGDLRAYLERLALSDN-VQNFIEQNPF 312
[Close]
BLAST of NO11G01180 vs. NCBI_GenBank
Match: XP_020681044.1 (uncharacterized protein LOC110098527 isoform X1 [Dendrobium catenatum] >PKU86011.1 hypothetical protein MA16_Dca001842 [Dendrobium catenatum])

HSP 1 Score: 147.5 bits (371), Expect = 6.900e-32
Identity = 88/214 (41.12%), Postives = 114/214 (53.27%), Query Frame = 0 
Query:   36 ACRRIPKLLVLDLNGLLVHRV--FTGEGPRADAEGPLPTVTTTWRLRNFWVYKRPYVEDFLRFCLDNFFVGVWTTASAANATSLLEGLLSPENIDKLVFLWDGKKCSYNGEMDPIKSGKPMAFKELRRLWESRE-----VAGLFGPNNTLLIDDSHYKASLNPPHTAIHPAAWDDPDAHADDDALGPNGSIRAYLEALTLAEGPIPEFVRTTPF 243
            ACR   KLLVLDLNGLL   V  +          G  P             +KRP+ +DFL+FC D+F +G+W++    N  S L+ LL  E   KL+F WD  KC+Y G        KP+  KEL++LW   E       G F P+NTLL+DDS YKA  NPP+TAI P  +   D    D++LGP G IR YLE L +++  +  FV   PF
Sbjct:  529 ACRTKRKLLVLDLNGLLCDIVNDYCNSYRVEKKVGGKP------------FFKRPFCDDFLKFCFDHFHIGIWSSRRKYNVDSALDYLLE-EFKHKLLFCWDQSKCTYTGARTIENHHKPLVLKELKKLWNKEESDLPWQKGDFSPSNTLLLDDSPYKALCNPPNTAIFPYPYRYTDER--DNSLGPGGDIRVYLENLLISD-DVQHFVEEHPF 726
[Close]
BLAST of NO11G01180 vs. NCBI_GenBank
Match: XP_020686838.1 (uncharacterized protein LOC110102722 isoform X4 [Dendrobium catenatum])

HSP 1 Score: 147.5 bits (371), Expect = 6.900e-32
Identity = 80/194 (41.24%), Postives = 112/194 (57.73%), Query Frame = 0 
Query:   42 KLLVLDLNGLLVHRVFTGEGPRADAEGPLPTVTTTWRLRNFWVYKRPYVEDFLRFCLDNFFVGVWTTASAANATSLLEGLLSPENIDKLVFLWDGKKCSYNGEMDPIKSGKPMAFKELRRLWESREVA-----GLFGPNNTLLIDDSHYKASLNPPHTAIHPAAWDDPDAHADDDALGPNGSIRAYLEALTLAE 231
            KLLVLDLNG+L   VF   G        LP      R     V+KRP+++DFL FC + F VG+W++ +  N   ++  ++  ++ D+L+F WD  KC+  G      S KP+  KEL +LW+  E +     G + P+NTLL+DDS YKA  NPPHTAI P  +D  D    D+ LGP G+IR YLE++  A+
Sbjct:  132 KLLVLDLNGILCDVVFGSHG------SCLPYKRVNMRS----VFKRPFLDDFLTFCFERFVVGIWSSRNKNNIIGVINYIMG-DSKDRLLFCWDQSKCTVTGFNTIENSHKPLVLKELIKLWDKEEASLPWDKGEYSPSNTLLVDDSPYKALCNPPHTAIFPFPYDFRDER--DNCLGPGGAIRLYLESIASAD 312
[Close]
BLAST of NO11G01180 vs. NCBI_GenBank
Match: XP_020686837.1 (uncharacterized protein LOC110102722 isoform X3 [Dendrobium catenatum])

HSP 1 Score: 147.5 bits (371), Expect = 6.900e-32
Identity = 80/194 (41.24%), Postives = 112/194 (57.73%), Query Frame = 0 
Query:   42 KLLVLDLNGLLVHRVFTGEGPRADAEGPLPTVTTTWRLRNFWVYKRPYVEDFLRFCLDNFFVGVWTTASAANATSLLEGLLSPENIDKLVFLWDGKKCSYNGEMDPIKSGKPMAFKELRRLWESREVA-----GLFGPNNTLLIDDSHYKASLNPPHTAIHPAAWDDPDAHADDDALGPNGSIRAYLEALTLAE 231
            KLLVLDLNG+L   VF   G        LP      R     V+KRP+++DFL FC + F VG+W++ +  N   ++  ++  ++ D+L+F WD  KC+  G      S KP+  KEL +LW+  E +     G + P+NTLL+DDS YKA  NPPHTAI P  +D  D    D+ LGP G+IR YLE++  A+
Sbjct:  220 KLLVLDLNGILCDVVFGSHG------SCLPYKRVNMRS----VFKRPFLDDFLTFCFERFVVGIWSSRNKNNIIGVINYIMG-DSKDRLLFCWDQSKCTVTGFNTIENSHKPLVLKELIKLWDKEEASLPWDKGEYSPSNTLLVDDSPYKALCNPPHTAIFPFPYDFRDER--DNCLGPGGAIRLYLESIASAD 400
[Close]
BLAST of NO11G01180 vs. NCBI_GenBank
Match: XP_020686836.1 (uncharacterized protein LOC110102722 isoform X2 [Dendrobium catenatum])

HSP 1 Score: 147.5 bits (371), Expect = 6.900e-32
Identity = 80/194 (41.24%), Postives = 112/194 (57.73%), Query Frame = 0 
Query:   42 KLLVLDLNGLLVHRVFTGEGPRADAEGPLPTVTTTWRLRNFWVYKRPYVEDFLRFCLDNFFVGVWTTASAANATSLLEGLLSPENIDKLVFLWDGKKCSYNGEMDPIKSGKPMAFKELRRLWESREVA-----GLFGPNNTLLIDDSHYKASLNPPHTAIHPAAWDDPDAHADDDALGPNGSIRAYLEALTLAE 231
            KLLVLDLNG+L   VF   G        LP      R     V+KRP+++DFL FC + F VG+W++ +  N   ++  ++  ++ D+L+F WD  KC+  G      S KP+  KEL +LW+  E +     G + P+NTLL+DDS YKA  NPPHTAI P  +D  D    D+ LGP G+IR YLE++  A+
Sbjct:  243 KLLVLDLNGILCDVVFGSHG------SCLPYKRVNMRS----VFKRPFLDDFLTFCFERFVVGIWSSRNKNNIIGVINYIMG-DSKDRLLFCWDQSKCTVTGFNTIENSHKPLVLKELIKLWDKEEASLPWDKGEYSPSNTLLVDDSPYKALCNPPHTAIFPFPYDFRDER--DNCLGPGGAIRLYLESIASAD 423
[Close]
BLAST of NO11G01180 vs. NCBI_GenBank
Match: XP_020686835.1 (uncharacterized protein LOC110102722 isoform X1 [Dendrobium catenatum])

HSP 1 Score: 147.5 bits (371), Expect = 6.900e-32
Identity = 80/194 (41.24%), Postives = 112/194 (57.73%), Query Frame = 0 
Query:   42 KLLVLDLNGLLVHRVFTGEGPRADAEGPLPTVTTTWRLRNFWVYKRPYVEDFLRFCLDNFFVGVWTTASAANATSLLEGLLSPENIDKLVFLWDGKKCSYNGEMDPIKSGKPMAFKELRRLWESREVA-----GLFGPNNTLLIDDSHYKASLNPPHTAIHPAAWDDPDAHADDDALGPNGSIRAYLEALTLAE 231
            KLLVLDLNG+L   VF   G        LP      R     V+KRP+++DFL FC + F VG+W++ +  N   ++  ++  ++ D+L+F WD  KC+  G      S KP+  KEL +LW+  E +     G + P+NTLL+DDS YKA  NPPHTAI P  +D  D    D+ LGP G+IR YLE++  A+
Sbjct:  250 KLLVLDLNGILCDVVFGSHG------SCLPYKRVNMRS----VFKRPFLDDFLTFCFERFVVGIWSSRNKNNIIGVINYIMG-DSKDRLLFCWDQSKCTVTGFNTIENSHKPLVLKELIKLWDKEEASLPWDKGEYSPSNTLLVDDSPYKALCNPPHTAIFPFPYDFRDER--DNCLGPGGAIRLYLESIASAD 430
The following BLAST results are available for this feature:
BLAST of NO11G01180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
NP_001340293.14.000e-3240.74Haloacid dehalogenase-like hydrolase (HAD) superfa... [more]
XP_020577178.15.300e-3239.24uncharacterized protein LOC110022529 isoform X2 [P... [more]
XP_020577179.15.300e-3239.24uncharacterized protein LOC110022529 isoform X3 [P... [more]
XP_020577177.15.300e-3239.24uncharacterized protein LOC110022529 isoform X1 [P... [more]
XP_007032780.16.900e-3236.55PREDICTED: uncharacterized FCP1 homology domain-co... [more]
XP_020681044.16.900e-3241.12uncharacterized protein LOC110098527 isoform X1 [D... [more]
XP_020686838.16.900e-3241.24uncharacterized protein LOC110102722 isoform X4 [D... [more]
XP_020686837.16.900e-3241.24uncharacterized protein LOC110102722 isoform X3 [D... [more]
XP_020686836.16.900e-3241.24uncharacterized protein LOC110102722 isoform X2 [D... [more]
XP_020686835.16.900e-3241.24uncharacterized protein LOC110102722 isoform X1 [D... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL116nonsL116Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL114nonsL114Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR021ngnoR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR019ngnoR019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002149NSK002149Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G01180.1NO11G01180.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|671181gene_4998Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100016g17gene5400Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G01180.1NO11G01180.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G01180 ID=NO11G01180|Name=NO11G01180|organism=Nannochloropsis oceanica|type=gene|length=2855bp
TCTATTGGCTAGCTTTCTTCTTTCTTTTTCTCATCCACAGCCTCGCTGTT
TCTCCCTCTTCTGTGTCCTCCTTTTTTCGGCCTCTTTCTTCATCTTTTCC
TTTATGAGAAGTTCCTGTCATCGAGGTGTGTGGTGATGGGAAGGGAGGGC
AGAGGAGGTGCGCTTCAAAGGAAAACATATTTGCCACAAAATAAAACCAC
CACTGTGTGTTTGAACACCTCCACTTTATTCAACACGCAAGACATGCGTA
CCTTCTCTCTGATTACCTTCTTCTCGTGTTCCGCCTTGCTCTTCTCACGC
AACGCCCTCGCCGCCGCCTCCACCTGCTTCTTGTTACTGTTCTCACCTAG
CAATGCTCCAAGCAGAACATCTGCCTCCCCCTTTTCATTACTGCCGTCCT
TCCCACTACTTGCTTTCCCTACAGGGTTGCCATCCTCATCCACCACATCG
TCGCCAAACGCATATTTATTTAGCAATGCCTCTCTTCCTCGTGCCGTGGC
CTTATCTCCCTGCGTCCGCTCAATCAAATTGGCTGCCTGTCTTTCCTGTT
CGGCTTGCGCAGCTCGCTTGTCTTGTTCCAACCGCTCTTCATAGCGCCGC
CTTTCCTCCGCCTTGTCTGCGTCTATCACGCTCGCTGCGCGTGCTGCCTC
AGCTGCATGTCGGACCTCGTATTGTTTCTTTAGTTCCGCTCCAAACCCCC
CAAGATCCTCCTCCGTCGCACTCTCTAAGAAGGCCAGGACGGACTCCACG
CGTTCTTCCAGTTTCCCTCCGTCCTCGTCGTCCATGATGCCCTCAATATA
GCCCTTGTATACGTCTGAGTCGAGGGACAAGCGCTCGAGCTGAGCCTCTA
GGTCGAATGTCGCCGCATCTCTTGTGTCCGTGCTGGACATGATGCGGCTG
GTGGTGATGGTCCTGCTGATATTGTTCCTGCTGGAGTTGCCCGTGTTCTG
AACCAGGATTCCTGGTGGCAGGCATGTAAAGGGAGGCAAATGAGAATTAA
TTACATTGAACGAAACCTCCTCACCCCCTCCTCGCCCATCACACTATTAC
TCCCCGTCAAGTTTCCTACAGCCACTAAGGCTACCAACCTATAAAGCACC
ATATACAGCCACAGGATCCTCAACAATGCGGCACACCAGTGAAGGGGACC
GATGGGACAACCGTGAACGGGAAAACCAGGAAATAGCATTGCTGAGGCAC
GAGGTTGCGgtgagtttggtgatgccgctacgacatgcacacaggccctg
gcattgatcatcttcctccaccccaacatcaacctacagCGTCTTCGTCG
GCATGTTCCCGCTTGTAGAAGAATACCAAAGCTGCTGGTGCTGGACTTGA
ATGGGCTGCTGGTACATCGAGTCTTCACAGGCGAGGGTCCAAGGGCAGgt
gagaggagggggggagaaagggaaaaaggagcatatgggaaatggccata
cttcgaaacttaagtcttgcaacgtacatacagATGCTGAAGGTCCACTT
CCTACGGTGACCACGACGTGGCGTTTGCGAAACTTTTGGGTTTACAAGCG
GCCATACGTGGAAGACTTCTTGAGgtgaggaacgcggaaagtagaggaga
ggcggggaattagctgtgagtctatggtaggctagaaatgattttctatt
ctgacatatgtaccctgtttgttctagATTTTGCCTGGACAACTTCTTCG
TGGGCGTGTGGACGACAGCTTCGGCCGCAAATGCCACGTCGCTCCTGGAG
GGCCTCTTGTCACCGgtgcgtgaggaagcaggaaggatggctgggctgag
gatctattttcacagagagtctaaataaaaacaattcacttattaaaaat
atatgtttatattcaatcttagGAGAACATCGATAAGCTCGTGTTTCTAT
GGGACGGCAAGAAgtaagtgcgcctgaccctccttgtctccctccttttt
ttaattgccaagactcatcctaatttttttaatctcatttcccagGTGCT
CGTATAATGGAGAAATGGATCCCATCAAATCGGGCAAACCCATGGCTTTT
AAGGAATTGCGGCGCCTGTGGGAAAGCAGGGAAGTGGCGGGCCTTTTTGg
tacgtctcgggggggtctaccggacggaggaggaaaggaaagtaacgctt
gttttgcgttcgacgggcgtcctcggtctcaggcttatcttatttttctc
cgttggcataccttttattatttccccctcaattatacagGCCCGAACAA
CACTTTGCTAATCGATGATTCCCACTATAAGGCCTCGCTGAATCCACCTC
ACACCGCCATCCACCCCGCCGCTTGGGACGATCCCGATGCCCACGCCGAT
GACGATGCCCTGGGGCCCAACGGCAGCATCCGCGCTTATTTAGAAGCATT
AACATTGGCAGAAGGGCCAATTCCTGAGTTTGTGCGCACCACACCCTTCG
AGACCTTTATCAGGGTAAGAGATGTGGCGAAGGGGCTGGAAGAGGTGTTG
CCATCAGCAACACCGAGGAGCACGACCACGCCTGAGCAGGATTACCATCA
GCAGCAGCATGCGTTGCAGCAACATCGATATGGCAGTGTGAACGAAGAGG
AGGACGACTACGAGGAGGACGAGATCGTGCTCGCGCCGGCCATGGCGGGC
TTGCGGATGGATTAGGGGGATAGAGGGAAGTGTGGGAGGAGATTATTTTG
ACCGATTGTATCATAAAAATAAAAGCTTGTACGTTAAATATTGTCAGCAA
AGGGCTCAAAGTATCAATCATTAGATCTTCAAATTTGCCGGTTGTTTAGA
TGTGCGCGGGGAGTCTTTTGTGATGCTGGCATTGCCGCTTGCAGCTTATC
GCCAG
back to top

protein sequence of NO11G01180.1

>NO11G01180.1-protein ID=NO11G01180.1-protein|Name=NO11G01180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=314bp
MRHTSEGDRWDNRERENQEIALLRHEVARLRRHVPACRRIPKLLVLDLNG
LLVHRVFTGEGPRADAEGPLPTVTTTWRLRNFWVYKRPYVEDFLRFCLDN
FFVGVWTTASAANATSLLEGLLSPENIDKLVFLWDGKKCSYNGEMDPIKS
GKPMAFKELRRLWESREVAGLFGPNNTLLIDDSHYKASLNPPHTAIHPAA
WDDPDAHADDDALGPNGSIRAYLEALTLAEGPIPEFVRTTPFETFIRVRD
VAKGLEEVLPSATPRSTTTPEQDYHQQQHALQQHRYGSVNEEEDDYEEDE
IVLAPAMAGLRMD*
back to top
Synonyms
Publications