NO11G00950, NO11G00950 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G00950 vs. NCBI_GenBank
Match: XP_002520862.1 (PREDICTED: macro domain-containing protein VPA0103 [Ricinus communis] >EEF41571.1 Protein LRP16, putative [Ricinus communis]) HSP 1 Score: 194.5 bits (493), Expect = 3.400e-46 Identity = 97/189 (51.32%), Postives = 130/189 (68.78%), Query Frame = 0 Query: 14 TRVFTLSDQTRLQIKVGDLTK----AAVGAIVNAANERMLGGGGVDGAIHRAAGPRLYDACKAVPEITPGVRCPTGEARLTPGFELPASFVVHTVGPVYENDFVSAPLLRACHQSSLGLASREGVASVAFPAISCGIYGYPASKAARIAVQSCIDFIREQDSTSPLQNIEFILFSQENFTAWVAAAEEL 199 T VF LS + L+I GD+TK + AIVN ANE+MLGGGG DGAIHRAAGP L DAC VPE+ PG+RCPTGEAR+TPGF+LPAS V+HTVGP+Y+ + SA +L+ +++SL +A + +AFPAISCG+Y YP +AA +++ + +F ++ + F+LFS E F WV A+EL Sbjct: 84 TAVFPLSSSSVLKINKGDITKWFVDGSSDAIVNPANEKMLGGGGADGAIHRAAGPELVDACYKVPEVRPGIRCPTGEARITPGFKLPASHVIHTVGPIYDANRNSAAILKNAYRNSLSVAKDNNIKFIAFPAISCGVYLYPFEEAASVSISTIKEF------ADDIKEVHFVLFSDEIFNVWVKKAKEL 266
BLAST of NO11G00950 vs. NCBI_GenBank
Match: XP_010554711.1 (PREDICTED: uncharacterized protein LOC104824360 [Tarenaya hassleriana]) HSP 1 Score: 194.5 bits (493), Expect = 3.400e-46 Identity = 99/198 (50.00%), Postives = 132/198 (66.67%), Query Frame = 0 Query: 8 VAAAATTRVFTLSDQTRLQIKVGDLTKAAV----GAIVNAANERMLGGGGVDGAIHRAAGPRLYDACKAVPEITPGVRCPTGEARLTPGFELPASFVVHTVGPVYENDFVSAPLLRACHQSSLGLASREGVASVAFPAISCGIYGYPASKAARIAVQSCIDFIREQDSTSPLQNIEFILFSQENFTAWVAAAEELTQP 202 +A++ VF LSD + L I GD+T+ +V AIVN ANERMLGGGG DGAIHRAAGP+L AC VPE+ PG+RCPTGEAR+TPGF LPAS V+HTVGPVY++D L +++SL +A + +AFPAISCG+YGYP +AA +A+ + F L+ + F+LFS E ++ W+ A+E+ P Sbjct: 80 MASSGEGAVFKLSDSSVLNILKGDITRWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPQLRAACYEVPEVRPGIRCPTGEARITPGFNLPASHVIHTVGPVYDSDSNPKESLANAYKNSLRVAKENNIKCIAFPAISCGVYGYPFDEAASVAISTIKQF------ADDLKEVHFVLFSDEIYSVWINKAKEVLHP 271
BLAST of NO11G00950 vs. NCBI_GenBank
Match: XP_012091148.1 (uncharacterized protein LOC105649184 isoform X1 [Jatropha curcas]) HSP 1 Score: 194.5 bits (493), Expect = 3.400e-46 Identity = 97/192 (50.52%), Postives = 130/192 (67.71%), Query Frame = 0 Query: 14 TRVFTLSDQTRLQIKVGDLTK----AAVGAIVNAANERMLGGGGVDGAIHRAAGPRLYDACKAVPEITPGVRCPTGEARLTPGFELPASFVVHTVGPVYENDFVSAPLLRACHQSSLGLASREGVASVAFPAISCGIYGYPASKAARIAVQSCIDFIREQDSTSPLQNIEFILFSQENFTAWVAAAEELTQP 202 T VF LS + L+I GD+TK + AIVN ANERMLGGGG DGAIHRAAGP L DAC VPE+ PG+RCPTGEAR+TPGF+LPAS V++TVGP+Y+ D A L+ +++SL +A + +AFPAISCG+YGYP +AA +++ + +F L+ + F+LFS + + W+ A+EL P Sbjct: 94 TTVFPLSSSSVLKINKGDITKWFVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELLDACYKVPEVQPGIRCPTGEARITPGFKLPASHVIYTVGPIYDTDSNPAASLKNAYRNSLTVAKDNNIKYIAFPAISCGVYGYPYEEAAAVSISTIKEF------KDDLKEVHFVLFSDDIYNVWLKKAKELLLP 279
BLAST of NO11G00950 vs. NCBI_GenBank
Match: KPK16476.1 (hypothetical protein AMJ62_05185 [Myxococcales bacterium SG8_38]) HSP 1 Score: 193.4 bits (490), Expect = 7.500e-46 Identity = 98/171 (57.31%), Postives = 125/171 (73.10%), Query Frame = 0 Query: 24 RLQIKVGDLTKAAVGAIVNAANERMLGGGGVDGAIHRAAGPRLYDACKAVPEITPGVRCPTGEARLTPGFELPASFVVHTVGPVYENDFVSAPLLRACHQSSLGLASREGVASVAFPAISCGIYGYPASKAARIAVQSCIDFIREQDSTSPLQNIEFILFSQENFTAWVAA 195 R+++ GDLT+ AV AIVNAANE++LGGGGVDGAIHRAAGP L +AC+ +PE+ PGVRCPTGEAR+TPGF L A V+HTVGPVY A LLR+ ++S+L LA G+ SVAFPAISCG+YGYP +AA I+ I +R++D L + F+LFS + +AW A Sbjct: 4 RIEVLRGDLTQQAVDAIVNAANEKLLGGGGVDGAIHRAAGPELLEACRKLPEVQPGVRCPTGEARITPGFGLRARHVIHTVGPVYRGRPTDAVLLRSAYRSALELAVEHGLRSVAFPAISCGVYGYPLDEAAAIS----ISVVRDRDWA--LDEVRFVLFSNDVLSAWKRA 168
BLAST of NO11G00950 vs. NCBI_GenBank
Match: XP_001700135.1 (predicted protein, partial [Chlamydomonas reinhardtii]) HSP 1 Score: 193.0 bits (489), Expect = 9.800e-46 Identity = 94/149 (63.09%), Postives = 118/149 (79.19%), Query Frame = 0 Query: 13 TTRVFTLSDQTRLQIKVGDLTKAAVGAIVNAANERMLGGGGVDGAIHRAAGPRLYDACKAVPEITPGVRCPTGEARLTPGFELPASFVVHTVGPVYENDFVSAPLLRACHQSSLGLASREGVASVAFPAISCGIYGYPASKAARIAVQS 162 ++R F L T+L IK GD+T V AIVNAANERMLGGGGVDGAIHRAAGP+L AC VPE+ PGVRCPTGEAR+TPGF L A V+HTVGP+Y ND VSAPLL + ++SS+ LA+++G+AS++FP IS G++GYP KAA++ V + Sbjct: 2 SSRTFPLRQGTKLVIKQGDITVEDVDAIVNAANERMLGGGGVDGAIHRAAGPQLVRACAEVPEVYPGVRCPTGEARITPGFHLKARHVIHTVGPIYHNDRVSAPLLASAYRSSVELAAQQGLASLSFPGISTGVFGYPWDKAAQVRVHT 150
BLAST of NO11G00950 vs. NCBI_GenBank
Match: AAB87596.2 (expressed protein [Arabidopsis thaliana]) HSP 1 Score: 192.2 bits (487), Expect = 1.700e-45 Identity = 99/189 (52.38%), Postives = 129/189 (68.25%), Query Frame = 0 Query: 16 VFTLSDQTRLQIKVGDLTKAAV----GAIVNAANERMLGGGGVDGAIHRAAGPRLYDACKAVPEITPGVRCPTGEARLTPGFELPASFVVHTVGPVYENDFVSAPLLRACHQSSLGLASREGVASVAFPAISCGIYGYPASKAARIAVQSCIDFIREQDSTSPLQNIEFILFSQENFTAWVAAAEELTQ 201 VF LSD + L+I GD+TK +V AIVN ANERMLGGGG DGAIHRAAGP+L AC VPE+ PGVRCPTGEAR+TPGF LPAS V+HTVGP+Y++D L +++SL +A + +AFPAISCGIYGYP +AA I + + F ++ + + F+LF+ + F+ WV A+E+ Q Sbjct: 9 VFNLSDSSLLKILKGDITKWSVDSSSDAIVNPANERMLGGGGADGAIHRAAGPQLRAACYEVPEVRPGVRCPTGEARITPGFNLPASRVIHTVGPIYDSDVNPQESLTNSYKNSLRVAKENNIKYIAFPAISCGIYGYPFDEAAAIGISTIKQF------STDFKEVHFVLFADDIFSVWVNKAKEVLQ 191
BLAST of NO11G00950 vs. NCBI_GenBank
Match: NP_030605.2 (appr-1-p processing enzyme family protein [Arabidopsis thaliana] >AAN41297.1 unknown protein [Arabidopsis thaliana] >AEC09853.1 appr-1-p processing enzyme family protein [Arabidopsis thaliana] >OAP10235.1 hypothetical protein AXX17_AT2G37710 [Arabidopsis thaliana]) HSP 1 Score: 192.2 bits (487), Expect = 1.700e-45 Identity = 99/189 (52.38%), Postives = 129/189 (68.25%), Query Frame = 0 Query: 16 VFTLSDQTRLQIKVGDLTKAAV----GAIVNAANERMLGGGGVDGAIHRAAGPRLYDACKAVPEITPGVRCPTGEARLTPGFELPASFVVHTVGPVYENDFVSAPLLRACHQSSLGLASREGVASVAFPAISCGIYGYPASKAARIAVQSCIDFIREQDSTSPLQNIEFILFSQENFTAWVAAAEELTQ 201 VF LSD + L+I GD+TK +V AIVN ANERMLGGGG DGAIHRAAGP+L AC VPE+ PGVRCPTGEAR+TPGF LPAS V+HTVGP+Y++D L +++SL +A + +AFPAISCGIYGYP +AA I + + F ++ + + F+LF+ + F+ WV A+E+ Q Sbjct: 73 VFNLSDSSLLKILKGDITKWSVDSSSDAIVNPANERMLGGGGADGAIHRAAGPQLRAACYEVPEVRPGVRCPTGEARITPGFNLPASRVIHTVGPIYDSDVNPQESLTNSYKNSLRVAKENNIKYIAFPAISCGIYGYPFDEAAAIGISTIKQF------STDFKEVHFVLFADDIFSVWVNKAKEVLQ 255
BLAST of NO11G00950 vs. NCBI_GenBank
Match: XP_012091151.1 (uncharacterized protein LOC105649185 isoform X1 [Jatropha curcas] >XP_020540972.1 uncharacterized protein LOC105649185 isoform X1 [Jatropha curcas] >KDP21657.1 hypothetical protein JCGZ_03328 [Jatropha curcas]) HSP 1 Score: 192.2 bits (487), Expect = 1.700e-45 Identity = 101/192 (52.60%), Postives = 128/192 (66.67%), Query Frame = 0 Query: 14 TRVFTLSDQTRLQIKVGDLTKAAV----GAIVNAANERMLGGGGVDGAIHRAAGPRLYDACKAVPEITPGVRCPTGEARLTPGFELPASFVVHTVGPVYENDFVSAPLLRACHQSSLGLASREGVASVAFPAISCGIYGYPASKAARIAVQSCIDFIREQDSTSPLQNIEFILFSQENFTAWVAAAEELTQP 202 T VF LS T L+I GD+TK V AIVN+AN+RMLGGGG DGAIH AAGP L+DAC VPE+ PGVRCPTGEAR+TPGF L AS V+HTVGP+Y D A L++ +++SL LA + +AFPAISCGIYGYP +AA I++ + +F L+ + F+LF E + W+ A+EL P Sbjct: 187 TAVFPLSSSTVLKINKGDITKWFVDGYSDAIVNSANQRMLGGGGADGAIHSAAGPELFDACYKVPEVQPGVRCPTGEARITPGFRLLASHVIHTVGPIYGFDVDPAASLKSAYRNSLKLARDNNIKYIAFPAISCGIYGYPHEEAAAISISTIKEF------KDDLKEVHFVLFFDEIYDVWLKKAKELLLP 372
BLAST of NO11G00950 vs. NCBI_GenBank
Match: XP_020540973.1 (uncharacterized protein LOC105649185 isoform X2 [Jatropha curcas]) HSP 1 Score: 192.2 bits (487), Expect = 1.700e-45 Identity = 101/192 (52.60%), Postives = 128/192 (66.67%), Query Frame = 0 Query: 14 TRVFTLSDQTRLQIKVGDLTKAAV----GAIVNAANERMLGGGGVDGAIHRAAGPRLYDACKAVPEITPGVRCPTGEARLTPGFELPASFVVHTVGPVYENDFVSAPLLRACHQSSLGLASREGVASVAFPAISCGIYGYPASKAARIAVQSCIDFIREQDSTSPLQNIEFILFSQENFTAWVAAAEELTQP 202 T VF LS T L+I GD+TK V AIVN+AN+RMLGGGG DGAIH AAGP L+DAC VPE+ PGVRCPTGEAR+TPGF L AS V+HTVGP+Y D A L++ +++SL LA + +AFPAISCGIYGYP +AA I++ + +F L+ + F+LF E + W+ A+EL P Sbjct: 84 TAVFPLSSSTVLKINKGDITKWFVDGYSDAIVNSANQRMLGGGGADGAIHSAAGPELFDACYKVPEVQPGVRCPTGEARITPGFRLLASHVIHTVGPIYGFDVDPAASLKSAYRNSLKLARDNNIKYIAFPAISCGIYGYPHEEAAAISISTIKEF------KDDLKEVHFVLFFDEIYDVWLKKAKELLLP 269
BLAST of NO11G00950 vs. NCBI_GenBank
Match: XP_010031090.1 (PREDICTED: uncharacterized protein LOC104420991 [Eucalyptus grandis] >KCW50356.1 hypothetical protein EUGRSUZ_J00121 [Eucalyptus grandis]) HSP 1 Score: 191.8 bits (486), Expect = 2.200e-45 Identity = 100/200 (50.00%), Postives = 133/200 (66.50%), Query Frame = 0 Query: 5 RGQVAAAATTRVFTLSDQTRLQIKVGDLTK----AAVGAIVNAANERMLGGGGVDGAIHRAAGPRLYDACKAVPEITPGVRCPTGEARLTPGFELPASFVVHTVGPVYENDFVSAPLLRACHQSSLGLASREGVASVAFPAISCGIYGYPASKAARIAVQSCIDFIREQDSTSPLQNIEFILFSQENFTAWVAAAEELTQ 201 RG A A F+LS + L I+ GD+TK + AI N ANERMLGGGG DGAIHRAAGP L +AC VPE+ PG+RCPTGEAR+TPGF LPAS V+HTVGP+Y+ D L +++SL +A + + VAFPAISCG+YGYP +AA IA+ + ++S+ L+ + F+LFS + + W++ A+EL Q Sbjct: 69 RGGYAEAQKLVSFSLSPTSALVIQKGDITKWSADGSSDAIANPANERMLGGGGADGAIHRAAGPELLEACYKVPEVRPGIRCPTGEARITPGFRLPASHVIHTVGPIYDADSNPQASLTNAYRNSLTVAKEKKLQYVAFPAISCGVYGYPYDEAATIAISTI------KESSDGLKEVHFVLFSDDIYNVWLSKAKELLQ 262 The following BLAST results are available for this feature:
BLAST of NO11G00950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G00950 ID=NO11G00950|Name=NO11G00950|organism=Nannochloropsis oceanica|type=gene|length=800bpback to top protein sequence of NO11G00950.1 >NO11G00950.1-protein ID=NO11G00950.1-protein|Name=NO11G00950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=215bpback to top Synonyms
Publications
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