NO11G00920, NO11G00920 (gene) Nannochloropsis oceanica

Overview
NameNO11G00920
Unique NameNO11G00920
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3466
Alignment locationchr11:355637..359102 +

Link to JBrowse

Properties
Property NameValue
DescriptionViolaxanthin de-epoxidase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:355637..359102 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0046422violaxanthin de-epoxidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0009507chloroplast
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR012674Calycin
IPR010788VDE
Homology
BLAST of NO11G00920 vs. NCBI_GenBank
Match: XP_005856280.1 (violaxanthin de-epoxidase, partial [Nannochloropsis gaditana CCMP526] >EKU20060.1 violaxanthin de-epoxidase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 656.4 bits (1692), Expect = 1.200e-184
Identity = 320/467 (68.52%), Postives = 357/467 (76.45%), Query Frame = 0
Query:  333 YNRTAALIVLGGGWLGSGSGRGGFLNDGGWPYAARAEDELAQYAKEGNKVGVDAKCFVQKCSLSTHDCLNNPXXXXXXXXLSKCKGEGTCSTACFAKYGNGVLDNFLHCAVEQQDCVHVPRDRSRATWTDPDTVGLDKQISPSFQISSLEGRWYKVMGMDARYDCFDCQVNHFSPKPGGTDTMLADVSFRMPRPRAPGFWENHITEELLGDGSGAHRSMHSVGRMFGLTFWENWYVIGENAAEDSELPAYKFVYYTGHTLQGNYEGAFVYARTPELPPELMSSISRVARANGLDPTKFCKIRNACFRPDAPPLEAGTS--SPVDGMKLTTVAPTSFAGIKGWLKTRALWLPRQVSELKAAMTRELDDWFEDPTKTSDWLMRQQERMIMVADEPRAGAVQVIASRTSEDGNGGDKSGDNTVSTPLPAHSGAIAAASSTVQLDSGKGSRSTSGGGLPPVFVDYLAKKSP 798
            Y    AL++L GGW+G     GG LN  G  Y ARAE+ELAQYAKEGNKVGVD KCFVQKCSL THDCLNNP        LSKCKGEGTCSTACFAKYGN VLD+FLHCAVEQQDCVHVPRDRSRATWTDPD VGLDK+ SP+F+I SL GRWYKVMGMDARYDCFDCQVNHF+PKPG  + MLADVSFRMPRPRAPGFWENH+TEE+LGDG GA RSMHSVGRMFGLTFWENWYVIGEN+ ED  LP YKFV+YTGHTLQGNYEGAFVYARTPELPPELM ++S+VARANGLDP+KFCKIRN CFRPD+    A +S              P+S+AG+K W+  RALWLP Q+S+L  AM +EL DWFEDPT TSDWL++QQERM+MV DE   G VQVIASR       GD  G    + P P  + A   A  T Q++ G+ S ST  GG  P F+D  A+K P
Sbjct:  184 YLPKVALLILSGGWMGVSG--GGILNGPGPLYPARAENELAQYAKEGNKVGVDPKCFVQKCSLPTHDCLNNPDCLKGLSCLSKCKGEGTCSTACFAKYGNRVLDDFLHCAVEQQDCVHVPRDRSRATWTDPDAVGLDKRSSPTFEIRSLNGRWYKVMGMDARYDCFDCQVNHFTPKPGAPNIMLADVSFRMPRPRAPGFWENHVTEEMLGDGPGARRSMHSVGRMFGLTFWENWYVIGENSPEDVGLPDYKFVFYTGHTLQGNYEGAFVYARTPELPPELMPAVSQVARANGLDPSKFCKIRNTCFRPDSSSFVAASSVRESAGTAHKPGAPPSSWAGVKSWITARALWLPEQISQLVTAMNQELGDWFEDPTTTSDWLIKQQERMVMVTDEAPTGRVQVIASRPG--SAAGDTDGSAKTAGPAPPVNAATITA-FTAQMEKGQSS-STDRGGFLPAFIDISAEKIP 644          
BLAST of NO11G00920 vs. NCBI_GenBank
Match: EWM25127.1 (violaxanthin de-epoxidase [Nannochloropsis gaditana])

HSP 1 Score: 656.4 bits (1692), Expect = 1.200e-184
Identity = 320/467 (68.52%), Postives = 357/467 (76.45%), Query Frame = 0
Query:  333 YNRTAALIVLGGGWLGSGSGRGGFLNDGGWPYAARAEDELAQYAKEGNKVGVDAKCFVQKCSLSTHDCLNNPXXXXXXXXLSKCKGEGTCSTACFAKYGNGVLDNFLHCAVEQQDCVHVPRDRSRATWTDPDTVGLDKQISPSFQISSLEGRWYKVMGMDARYDCFDCQVNHFSPKPGGTDTMLADVSFRMPRPRAPGFWENHITEELLGDGSGAHRSMHSVGRMFGLTFWENWYVIGENAAEDSELPAYKFVYYTGHTLQGNYEGAFVYARTPELPPELMSSISRVARANGLDPTKFCKIRNACFRPDAPPLEAGTS--SPVDGMKLTTVAPTSFAGIKGWLKTRALWLPRQVSELKAAMTRELDDWFEDPTKTSDWLMRQQERMIMVADEPRAGAVQVIASRTSEDGNGGDKSGDNTVSTPLPAHSGAIAAASSTVQLDSGKGSRSTSGGGLPPVFVDYLAKKSP 798
            Y    AL++L GGW+G     GG LN  G  Y ARAE+ELAQYAKEGNKVGVD KCFVQKCSL THDCLNNP        LSKCKGEGTCSTACFAKYGN VLD+FLHCAVEQQDCVHVPRDRSRATWTDPD VGLDK+ SP+F+I SL GRWYKVMGMDARYDCFDCQVNHF+PKPG  + MLADVSFRMPRPRAPGFWENH+TEE+LGDG GA RSMHSVGRMFGLTFWENWYVIGEN+ ED  LP YKFV+YTGHTLQGNYEGAFVYARTPELPPELM ++S+VARANGLDP+KFCKIRN CFRPD+    A +S              P+S+AG+K W+  RALWLP Q+S+L  AM +EL DWFEDPT TSDWL++QQERM+MV DE   G VQVIASR       GD  G    + P P  + A   A  T Q++ G+ S ST  GG  P F+D  A+K P
Sbjct:  144 YLPKVALLILSGGWMGVSG--GGILNGPGPLYPARAENELAQYAKEGNKVGVDPKCFVQKCSLPTHDCLNNPDCLKGLSCLSKCKGEGTCSTACFAKYGNRVLDDFLHCAVEQQDCVHVPRDRSRATWTDPDAVGLDKRSSPTFEIRSLNGRWYKVMGMDARYDCFDCQVNHFTPKPGAPNIMLADVSFRMPRPRAPGFWENHVTEEMLGDGPGARRSMHSVGRMFGLTFWENWYVIGENSPEDVGLPDYKFVFYTGHTLQGNYEGAFVYARTPELPPELMPAVSQVARANGLDPSKFCKIRNTCFRPDSSSFVAASSVRESAGTAHKPGAPPSSWAGVKSWITARALWLPEQISQLVTAMNQELGDWFEDPTTTSDWLIKQQERMVMVTDEAPTGRVQVIASRPG--SAAGDTDGSAKTAGPAPPVNAATITA-FTAQMEKGQSS-STDRGGFLPAFIDISAEKIP 604          
BLAST of NO11G00920 vs. NCBI_GenBank
Match: CEL92120.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 296.2 bits (757), Expect = 3.000e-76
Identity = 159/372 (42.74%), Postives = 210/372 (56.45%), Query Frame = 0
Query:  362 WPYAARAEDELAQYAKEGNKVGVDAKCFVQKCSLSTHDCLNNPXXXXXXXXLSKCKGEGTCSTACFAKYGNGVLDNFLHCAVEQQDCVHVPRDRSRATWTDPDTVGLDKQISP--SFQISSLEGRWYKVMGMDARYDCFDCQVNHFSPKPGGTDTMLADVSFRMPRPRAPGFWENHITEELLGDGS---GAHRSMHSVGRMFGLTFWENWYVIGENAAEDSELPAYKFVYYTGHTLQGNYEGAFVYARTPELPPELMSSISRVARANGLDPTKFCKIRN--ACFRPDAPPLEAGTSSPVDGMKLT-TVAPTSFAGIK-----GWLKTRA--LWLPRQVSELKAAMTRELDDWFEDPTKTSDWLMRQQERMIM 719
            WP  A A+DEL ++A  GN V VD  CFV++C L T  C  +         L++C+G+  CST+CF+++G+  LD FL C+VE++ CV+VPRD   ATWT P     D+   P   F ++S+EG WYKV+GM++RYDCFDCQ N F+P           V F +PRPR  G W N ++E++  + +      RS  + G MFGLTFWENWY+IG+    D     YKFVYYTGHTLQGNY GAFVY RTP LP  ++  +++VA    L    FC I N     R D    E        GM+L  T    +   I       W  +R+  LW  R   EL   +  E  DWFEDP+ TS WL+ QQ R+I+
Sbjct:  165 WPPPAYADDELRKFADNGNPVAVDPLCFVRRCQLQTKACAADRSCMKGLTCLARCRGDSMCSTSCFSRFGSSTLDAFLTCSVEKEGCVNVPRDLGPATWTSPKE---DQAPGPVDDFDVASMEGTWYKVLGMNSRYDCFDCQKNTFTPAEEPNKPWRVAVEFSLPRPRG-GAWNNRVSEDMFPEATPDMRKQRSYRTKGEMFGLTFWENWYIIGQ---RDEGPDPYKFVYYTGHTLQGNYRGAFVYVRTPTLPQSIVPELTQVAERAKLKLADFCVIDNDKVGRRQDG---ERERERERGGMRLARTTGKAAKEDIDRDANLRWFTSRSIPLWNYR-FFELTRLLAEEFSDWFEDPSITSQWLVEQQRRVIL 525          
BLAST of NO11G00920 vs. NCBI_GenBank
Match: XP_002289140.1 (violaxanthin de-epoxidase-like 1 [Thalassiosira pseudonana CCMP1335] >EED92677.1 violaxanthin de-epoxidase-like 1 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 228.4 bits (581), Expect = 7.800e-56
Identity = 112/276 (40.58%), Postives = 156/276 (56.52%), Query Frame = 0
Query:  370 DELAQYAKEGNKVGVDAKCFVQKCSLSTHDCLNNPXXXXXXXXLSKCKGEGTCSTACFAKYGNGVLDNFLHCAVEQQDCVHVPRDRSRATWTDPDTVGLDKQISPSFQISSLEGRWYKVMGMDARYDCFDCQVNHFSPKPGGTDTMLADVSFRMPRPR--APGFWENHITEELLGDG------SGAHRSMHSVGRMFGLTFWENWYVIGENAAEDSELPAYKFVYYTGHTLQGNYEGAFVYARTPELPPELMSSISRVARANGLDPTKFCKIRNAC 638
            D  A+YAKE      D  CF+ KC   T    +NP        L +CKGE +C+T CFA++G+  LDN+L C +E  +CV VP++   +     + VG D  +   F  S+L G+WYK  G++  YD FDCQ N F         +   + FR+PRP     GFWEN +TE ++ D       +   R+MH+ G+M+GL F ENWY++GE+   D+++P +K V Y GHTLQGNYE AFVYA+   LP E + ++   A   GLD  KF +I N C
Sbjct:  109 DGFAEYAKENKMEQSDVGCFINKCGDQTKQLFSNPRGIKGVSCLGRCKGEQSCATRCFAEFGSEDLDNWLSCTIEDYECVKVPKNIDNSA----ENVGYDTTVK-KFDPSTLVGKWYKTDGLNPNYDLFDCQSNTFDFSDDTKKELDMGIFFRVPRPEEYGGGFWENSLTEHMIVDAVSPELDNPTGRTMHTAGKMYGLKFTENWYILGESNG-DNDIPPFKLVAYKGHTLQGNYEEAFVYAKESVLPKEAVGAVREAAAKAGLDFDKFTRIDNTC 378          
BLAST of NO11G00920 vs. NCBI_GenBank
Match: XP_009039080.1 (hypothetical protein AURANDRAFT_65820 [Aureococcus anophagefferens] >EGB06124.1 hypothetical protein AURANDRAFT_65820 [Aureococcus anophagefferens])

HSP 1 Score: 225.7 bits (574), Expect = 5.000e-55
Identity = 139/370 (37.57%), Postives = 184/370 (49.73%), Query Frame = 0
Query:  366 ARAEDELAQYAKEG-NKVGVDAKCFVQ--KCSLSTHDCLNNPXXXXXXXXLSKCKGEGTCSTACFAKYGNGVLDNFLHCAVEQQDCVHV----PRDRSRATWTDPDTVGLDKQISPSFQISSLEGRWYKVMGMDARYDCFDCQVNHFSPKPGGTDTMLADVSFRMPRPRAPGFWENHITEE-----------LLGDGSGA-HRSMHSVGRMFGLTFWENWYVIGENAAEDSELPAYKFVYYTGHTLQGNYEGAFVYARTPELPPELMSSISRVARANGLDPTKFCKIRN--------ACFRPDAPPLEAGTSSPVDGMKLTTVAPTSFAGIKGWLKTRALWLPRQVSELKAAMTRELDDWFEDPTKTSDW 709
            A AE+ELA    +G +   VD  CF +   C  +   CLN           +KC G+  C T CFAKYGN  +++ L C++E+  C+ V    P   S      P  V +      +F   +LEG WYKVMG + RYDCFDCQ N F+  P G D +  DV F MPRP A G +   ++E+           LLGDG  A  R   + G MFGLTFWENW VIGENA ++   P +KF++Y+G T Q  YEGAFVYAR P LPP    S+ R+A+  G+ P  FC +RN        A    DAP  EA     +      + +     G+    K   + LP+ V      +  E+  + EDP  T  W
Sbjct:   64 AVAENELAALGAKGFDSSLVDTSCFAEGGACGAAAKACLNTGDCRRGMTCTAKCLGDNACITGCFAKYGNAPMNDLLECSIEKNSCIKVAILPPGPDSATEAPAPPLVPV-----ANFDQKTLEGTWYKVMGWNDRYDCFDCQKNSFA--PAGRDKLAVDVEFSMPRPPA-GSYPLRLSEKLVFDQRSAPGALLGDGGAAPRRHARTEGHMFGLTFWENWSVIGENARDE---PEFKFIHYSGRTSQNTYEGAFVYAREPTLPPAAKKSVYRIAKEAGMVPANFCAVRNDLATCGVDAPAADDAPVPEARARKGLFMPGAASASEVDETGLANDRKPEPV-LPKWV----RTVGEEVASYLEDPHATERW 417          
BLAST of NO11G00920 vs. NCBI_GenBank
Match: CBJ31191.1 (violaxanthin de-epoxidase-like protein of unknown function [Ectocarpus siliculosus])

HSP 1 Score: 224.2 bits (570), Expect = 1.500e-54
Identity = 113/289 (39.10%), Postives = 156/289 (53.98%), Query Frame = 0
Query:  370 DELAQYAKEGNKV-GVDAKCFVQKCSLSTHDCLNNPXXXXXXXXLSKCKGEGTCSTACFAKYGNGVLDNFLHCAVEQQDCVHVPRDRSRATWTDPDTVGLDK---QISPSFQISSLEGRWYKVMGMDARYDCFDCQVNHF-------SPKPGGTDTMLA----------DVSFRMPRPRAPGFWENHITEELLGDGSGAHRSMHSVGRMFGLTFWENWYVIGENAAEDSELPAYKFVYYTGHTLQGNYEGAFVYARTPELPPELMSSISRVARANGLDPTKFCKIRNAC 638
            D    YA +G ++   D  CF  +C   T  C  +         L +CKGE  C+T CFA+YG+  LD++L C +E   CV +P+D         D   +DK    I   F+   L+G WYK+MG++ +YDCFDCQ N F       +P P G D   A           V+FR+ +P +  FWEN ITE L  D + + R+ H+ G++FGL+F ENWYV G +     E   + FV Y GHTLQG+Y+G FVYAR P LP   ++ ++RVAR +G+DP     I N C
Sbjct:   31 DGFEDYAAQGQQMENSDVGCFANECKRETASCFTDGSCLKGVTCLGRCKGEQECATRCFAQYGSNKLDSWLTCTLEDHSCVKIPKDM--------DFSAIDKDPPHIVKGFEAKQLQGTWYKIMGVNKKYDCFDCQKNTFNVAQAVDAPVPAGGDVTAATATPRQVADIKVNFRLAKPDSDDFWENTITETLQVDPADSPRTFHTDGKLFGLSFKENWYVTGHSTDPGEE---FVFVQYRGHTLQGSYDGGFVYARKPYLPKSALAKVARVAREHGIDPGSMLAIDNTC 308          
BLAST of NO11G00920 vs. NCBI_GenBank
Match: XP_005764800.1 (Violaxanthin deepoxidase [Emiliania huxleyi CCMP1516] >XP_005791668.1 violaxanthin de-epoxidase [Emiliania huxleyi CCMP1516] >EOD12371.1 Violaxanthin deepoxidase [Emiliania huxleyi CCMP1516] >EOD39239.1 violaxanthin de-epoxidase [Emiliania huxleyi CCMP1516])

HSP 1 Score: 224.2 bits (570), Expect = 1.500e-54
Identity = 134/366 (36.61%), Postives = 184/366 (50.27%), Query Frame = 0
Query:  368 AEDELAQYAKEGNKVG-VDAKCFVQKCSLSTHDCLNNPXXXXXXXXLSKCKGEGTCSTACFAKYGNGVLDNFLHCAVEQQDCVHVPRDRSRATWTDPDTVG-LDKQISPSFQIS----SLEGRWYKVMGMDARYDCFDCQVNHFSPKPGGTDTMLA--------DVSFRMPRPRA--PGFWENHITEELLGDGS-GAHRSMHSVGRMFGLTFWENWYVIGENAAEDSELPAYKFVYYTGHTLQGNYEGAFVYARTPELPPELMSSISRVARANGLDPTKFCKIRNACFRPDAPPLEAGTSSPVDGMKLTTVAPTSFAGIKGWLKTRALWLPRQVSELKAAMTRELDDWFEDPTKTSDWLMRQQERM 717
            AE+ELA  A+   K   +D +CF + C L T  C  N          +KC G+  C+  CFAK+GN VLD+ L C +E Q C+ +           P   G LD  + P   ++     + G+WYKVMG ++ YDC+DCQ N F P        +A        DV + +PR RA  P  +   + E+L+ D + G+HR+ H+ G+MFGLTFWENWYVIG N   D    A++ VYYTG TLQ  YEGAFVYAR P+LP   M  I  +AR  GL+PT FC I N C+   A P      +P         A  +    +  L   A   PR        + R+  ++ EDP      +  +Q++M
Sbjct:   96 AENELADLAQGQFKSELIDPQCFAKSCKLQTKACAENGDCMKGLTCAAKCMGDTQCTVGCFAKFGNPVLDDVLSCTIEDQSCLKI-------AIVAPGADGPLDAPLPPKPLVAVTPQQMAGKWYKVMGWNSNYDCYDCQRNSFRPAARQQAMAIAADGSAVDVDVEYSLPRQRAGMPQDFHAQLHEKLVFDTTPGSHRTAHTEGKMFGLTFWENWYVIGAN---DRGEDAFRIVYYTGKTLQNKYEGAFVYARKPDLPASAMPHIYSIARQAGLEPTSFCAIDNRCY---AAPAATAGETPQPPPFTNVAAADTIELDEAPLSAPATPPPRM------GVLRDAQEFLEDPRPFGRAIFEKQKKM 442          
BLAST of NO11G00920 vs. NCBI_GenBank
Match: XP_009037347.1 (hypothetical protein AURANDRAFT_64560 [Aureococcus anophagefferens] >EGB07981.1 hypothetical protein AURANDRAFT_64560 [Aureococcus anophagefferens])

HSP 1 Score: 220.7 bits (561), Expect = 1.600e-53
Identity = 156/455 (34.29%), Postives = 216/455 (47.47%), Query Frame = 0
Query:  333 YNRTAALIVLGGGWLGSGSG-------RGGFLNDGGWPYAARAEDELAQYAKEG-NKVGVDAKCFVQ--KCSLSTHDCLNNPXXXXXXXXLSKCKGEGTCSTACFAKYGNGVLDNFLHCAVEQQDCVHVPRDRSRATWTDPDTVGLDKQISP--SFQISSLEGRWYKVMGMDARYDCFDCQVNHFSPKPGGTDTMLADVSFRMPRPRAPGFWENHITEE-----------LLGDGSGA-HRSMHSVGRMFGLTFWENWYVIGENAAEDSELPAYKFVYYTGHTLQGNYEGAFVYARTPELPPELMSSISRVARANGLDPTKFCKIRN--------ACFRPDAPPLEAGTSSPVDGMKLTTVAPTSFAGIKGWLKTRALWLPRQVSELKAAMTRELDDWFEDPTKTSDWLMRQQERMI----MVADEPRAGAVQVIASRTSED-GNGGDKSGDNTV 751
            +N+ AA  V G    G   G           L  GG    A AE+ELA    +G +   VD  CF +   C  +   CLN           +KC G+  C T CFAKYGN  +++ L C++E+  C+ V       T  D  T      + P  +F   +LEG WYKVMG + RYDCFDCQ N F+    G D +  DV F MPRP A G +   ++E+           LLGDG+ A  R   + G MFGLTFWENW VIGENA ++   P +KF++Y+G T Q  YEGAFVYAR P LPP    S+ R+A+  G+ P  FC +RN        A    +APPL    +      +    +     G+    K   + LP+ V      +  E+  + EDP  T  WL       +    +V++     A  ++A   ++D  +G D +G  T+
Sbjct:   27 HNKRAAAHVCGASRAGVDVGGAVAALAAAAALTLGG---PAVAENELAALGAKGFDSSLVDTSCFAEGGACGAAAKACLNTGDCRRGMTCTAKCLGDNACITGCFAKYGNAPMNDLLECSIEKNSCIKV---AILPTGPDSATEAPAPPLVPVANFDQKTLEGTWYKVMGWNDRYDCFDCQKNSFA--SAGRDKLAVDVEFSMPRPPA-GAYPLRLSEKLVFDQRSAPGALLGDGAAAPRRHARTEGHMFGLTFWENWSVIGENAKDE---PEFKFIHYSGKTSQNTYEGAFVYAREPTLPPAAKKSVYRIAKEAGMVPANFCAVRNDLATCGADAAAADEAPPLPEALARKGLFTRAAFASEVDETGLASDRKPDPV-LPKWV----RTVGEEVASYLEDPHATERWLSPTHVEGVVSKWLVSEGDAVEACDLVAHLDADDVYDGSDLTGRVTM 464          
BLAST of NO11G00920 vs. NCBI_GenBank
Match: GAX09265.1 (hypothetical protein FisN_17Lh008 [Fistulifera solaris])

HSP 1 Score: 219.2 bits (557), Expect = 4.700e-53
Identity = 117/289 (40.48%), Postives = 164/289 (56.75%), Query Frame = 0
Query:  368 AEDELAQYAKEGNKVGVDAKCFVQKCSLSTHDCLNNPXXXXXXXXLSKCKGEGTCSTACFAKYGNGVLDNFLHCAVEQQDCVHVPRDRSRATWTDPDTVGLDKQISPSFQISSLEGRWYKVMGMDARYDCFDCQVNHFSPKPGGTDTMLADVSFRMPRPRAPGFWENHITEELLGDGSGAH--RSMHSVGRMFGLTFWENWYVIGENAAEDSELPAYKFVYYTGHTLQGNYEGAFVYARTPELPPELMSSISRVARANGLDPTKFCKIRNACFRPDAPPL---EAGTSS 652
            A D  A+YAKE      D  CFVQKC   T     NP        L +CKGE  C+T CFA++G+  L+++L C +E+ +CV VP++   +     +TVG   ++  +F   SL G WYK  G++  YD FDCQ N F         M   + FR+ RP   GFWEN +TE ++ + + +    +MH+ G+M+GL+F ENWY++GE+     E+P +K V Y GHTLQGNYEGAFVYA+ P LP   + ++   A   GLD  +F +I N C  P   PL   +AGT +
Sbjct:   64 AYDGFAEYAKENQMDKSDVSCFVQKCGDQTKALFQNPRGIKGVTCLGRCKGEQACATQCFAEFGSEALNDWLSCTIEENECVKVPKNVDNSA----ETVGFPYKVE-AFDPRSLVGSWYKTDGLNPNYDLFDCQTNTFERVNDKEVDM--GIFFRVRRPEG-GFWENSLTEHMVLEDTKSKDAPTMHTEGKMYGLSFSENWYILGESDG-SKEVPPFKLVAYKGHTLQGNYEGAFVYAKEPILPSAAVPAVREAAAKAGLDFDQFTRIDNTC--PVGNPLNDAQAGTGT 341          
BLAST of NO11G00920 vs. NCBI_GenBank
Match: KOO21030.1 (violaxanthin de-epoxidase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 218.0 bits (554), Expect = 1.100e-52
Identity = 139/382 (36.39%), Postives = 192/382 (50.26%), Query Frame = 0
Query:  366 ARAEDELAQYAKEGNKVG-VDAKCFVQKCSLSTHDCLNNPXXXXXXXXLSKCKGEGTCSTACFAKYGNGVLDNFLHCAVEQQDCVHVPRDRSRATWTDPDTVGLDKQISPSFQISS----LEGRWYKVMGMDARYDCFDCQVNHF-----------SPKPGGTDTMLADVSFRMPRPR--AP-GFWENHITEELLGDGS-GAHRSMHSVGRMFGLTFWENWYVIGENAAEDSELPAYKFVYYTGHTLQGNYEGAFVYARTPELPPELMSSISRVARANGLDPTKFCKIRNACFR---PDA---PPLEAGTSSPVDGMKLTTVAPTSFAGIKGWLKTRALWLPRQVSELKAAMTRELDDWFEDPTKTSDWLMRQQERMIMVAD 722
            A AE+ELAQ A + +    V   CF   C   T  C  +          +KC G+  C+  CFA+YGN  LD  L C +E   C+ +      AT         D   +P   + +    + G+WYKV+G +  YDCF+CQ N F           S    G  + + DV + MPR R  AP   ++ H+ E L+ D + GA R+ H+ G MFGLTFWENWY+IG N  ++   P ++FVYYTG TLQ  YEGAFVYAR PELP   M SI ++AR  G+DPT+ C I N+CF     DA   PPL    +S  D +    +AP++     G L T        +  L+ A  R++++  EDP      +  +Q  M  V +
Sbjct:   93 ALAENELAQLASQKSTAELVKPGCFATSCKAETEACGADRDCVKGLACSAKCMGDAQCTMGCFARYGNPTLDRVLQCTIEDAGCIQI------ATQAPGADSPYDAPKAPKALVKATPAMMSGKWYKVLGFNPNYDCFECQKNSFSAGAVANTASVSAMTVGPQSAVVDVEYTMPRERVGAPTTTFQAHLVESLVFDSAPGAVRTAHTEGHMFGLTFWENWYLIGTNQPKE---PEFRFVYYTGKTLQNRYEGAFVYARKPELPTASMPSIYKLAREAGMDPTRACCIDNSCFSAPVDDAAAMPPLFTPVAS-ADTLDAVPLAPSASIP-TGPLDT-------FLDSLRTA-ARDVEELLEDPRPAGQAIFARQRPMSEVRE 455          
The following BLAST results are available for this feature:
BLAST of NO11G00920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005856280.11.200e-18468.52violaxanthin de-epoxidase, partial [Nannochloropsi... [more]
EWM25127.11.200e-18468.52violaxanthin de-epoxidase [Nannochloropsis gaditan... [more]
CEL92120.13.000e-7642.74unnamed protein product [Vitrella brassicaformis C... [more]
XP_002289140.17.800e-5640.58violaxanthin de-epoxidase-like 1 [Thalassiosira ps... [more]
XP_009039080.15.000e-5537.57hypothetical protein AURANDRAFT_65820 [Aureococcus... [more]
CBJ31191.11.500e-5439.10violaxanthin de-epoxidase-like protein of unknown ... [more]
XP_005764800.11.500e-5436.61Violaxanthin deepoxidase [Emiliania huxleyi CCMP15... [more]
XP_009037347.11.600e-5334.29hypothetical protein AURANDRAFT_64560 [Aureococcus... [more]
GAX09265.14.700e-5340.48hypothetical protein FisN_17Lh008 [Fistulifera sol... [more]
KOO21030.11.100e-5236.39violaxanthin de-epoxidase [Chrysochromulina sp. CC... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002182NSK002182Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00920.1NO11G00920.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590958gene_4966Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100016g50gene5371Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00920.1NO11G00920.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00920 ID=NO11G00920|Name=NO11G00920|organism=Nannochloropsis oceanica|type=gene|length=3466bp
ATGCAGAAGCTGATGACACAATCCCCTCCCTCAGCAGTACTCGAGGGGTC
GAGGGAGGCAGGAGGTCGAGACCCGTCGAGTTGTCTGTGGCTGCAAGTGT
GGCTGATAATCAGGAAAACAAACTACAGCCAGCTAGCCCCGGGTAGTGGT
GAGAGACATCAGAGAAGCGCAGAGACCTATGAGTCTTACAGCAAGAAAGA
AGGAAGAGGAAGAAGAAGAAGGGGGAGGGAGGAGGGGGAGGAGGAGGGAG
ACGAGGAGGGGGTGGAAGAGGAAGGGGAGGAGGAGGAGGAGGCTGTGGAA
GCAGAGGAGGAGGAGGGGGGGAAGGTGGAGGAGGAGGAGAAGGGAAAGGA
GGAGGAAGGGAAAGGGGAGGAGGAGGCGGAGGCGGAGGAGGCGGAGGAGG
AGGAGGGGGCGGAGGCGGTGGAAGCAGAGGAGGAGGAGGCGGAGGCGGAG
GAGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTCATAGGCGGGCC
ATCCGAGGACTTTGTTGGTGTGAAACCTGAGAACACTTCGTGTCTCGGGA
CGGCAGTGGGGCACGTAACATCCTGCGGGTGTACAGGAATATGGTCCGTG
GGGAAACTCGTCCCCATGATCTTCGgtttggtcaaccgcggatagatatg
cggacactctatgtgtagccttcctgctcacctcctcttttctcctcctt
tcgcttctccacctggccctgtgtgggccgtccggggactttgcctgatc
gaaaaacctgtcaaagtcgctagtaaaactcggacaagggataaggggtg
aataggcaacattttattgttggaaggctccccctcgtatgcaagtccta
gaggacgcaggttgcatgcgatagttctagagggatgtaacatctaacga
ccaacgacccatttttacgtatgtgtgtagcagatgtcggtacatcaagc
aacaaccaaaaaaaggagcaactaaccgatgggccgggttacagcagcac
actcgccatgtcgtgtcggatcaatctttcgaagcccttgatcacttcaa
tgtggtagctttggactaaccgcttgaaggcctgtgaggcagctaggggg
atggaaaggttttaaggctgacataatgtatgtgttatttcttttttcct
gatggctcctacgaggtacttgcgtttttgtgccgcgtgtccttgcttgc
tcattttgcttgctgccctctctcacacgaacgatccttttctccctgaa
cattatctctcagctgcagattgctactttacctgcaggactggctggtg
aactctcccgatatcgcctttagCCACGGACAAGAAGGACATCGTGCGTG
GCGAAGCAAGACGGGCACCCTCGGGCGAGGCTGCAGAAGTGAGCCATGCC
GTTCCCTTGTCCTGTCCCACGGCGCAACAACGAAGAGAGGATGGACGCTT
TATTCAAGGCACAGCGAGGAAGGAAAGAGTCGGAGCGCCCACGGCGGGGG
AGAAGAAGAGGCAGTCCGACAGGGACAAGCACGAAAAGGGTGCTTTTGGG
CAGCGCGgtgagcaattcgtgcatatgtttcgtctgcctgtcaacggcca
attaatactattgcttttttaaattacaaatgttccttttttgggaggaa
agcaattacgtatggtaggcccccatgattgggccaacgtcctgtcttcc
gtcactttgccatggaatgccaaaacggctgtttgattctatggtgtact
ttcgcaccctcccttcttgatactgatcacatgatacacgcacacacgca
gGTGTTCCATGTTTTGTGCCTCAGGGCATCCGGCATGCCAACCGCATTTG
GTTTGCCAATCTCACTTGCGACCTTCGGAAGGCCCGACGACGCGGCCAGG
ATGTCGGCAACCAGGGAGAGAGGGACTGTATATTGGAGTACAACCGAACg
tacgagtgccaacgagcgtgatgcgtacgacttcgagagcgacgaccaga
ggacaatagaaagtctgtcgcgatcatcgcaacgaccagcatcaaggatc
gggcagctattctcgcgacttttacccagGGCGGCCCTGATAGTGCTTGG
CGGGGGTTGGCTTGGGAGTGGCAGCGGGAGAGGGGGTTTTCTGAACGATG
GAGGGTGGCCGTATGCGGCTCGTGCGGAGGATGAATTGGCGCAATACGCG
AAGGAAGGCAACAAAGTGGGGGTCGACGCAAAGTGCTTCGTGCAAAAGTG
CTCACTGTCCACGCACGACTGCCTCAATAACCCGGACTGTCTCAAGGGCC
TGTCCTGCCTCTCCAAATGCAAGGGCGAGGGAACATGCTCCACTGCATGC
TTCGCCAAGTACGGCAATGGAGTGCTGGATAACTTCTTGCACTGTGCCGT
GGAGCAACAGGACTGCGTACACGTGCCGCGCGACCGGTCGCGGGCCACCT
GGACGGACCCGGACACGGTGGGGCTGGACAAACAGATCTCGCCCTCCTTC
CAGATCTCCTCGCTGGAGGGCCGATGGTACAAAGTGATGGGCATGGATGC
GCGCTATGACTGCTTTGACTGCCAGGTAAACCACTTTTCGCCCAAACCGG
GCGGCACAGACACCATGCTAGCCGACGTATCCTTCCGTATGCCCAGACCG
CGCGCCCCGGGCTTCTGGGAAAATCACATCACAGAGGAATTGCTAGGGGA
CGGGTCAGGCGCACACCGATCCATGCACTCGGTAGGACGCATGTTCGGGC
TAACGTTCTGGGAGAACTGGTACGTGATCGGCGAGAACGCGGCCGAGGAC
TCGGAGTTGCCGGCCTACAAGTTCGTCTACTACACGGGCCACACTCTGCA
GGGCAACTACGAGGGCGCCTTTGTCTACGCCCGCACGCCCGAGCTACCGC
CCGAACTTATGTCATCTATCTCCCGGGTAGCGCGTGCCAATGGACTCGAT
CCCACCAAGTTTTGCAAGATCCGCAACGCCTGCTTCCGCCCGGATGCGCC
ACCCCTCGAGGCGGGCACATCTTCCCCCGTGGATGGCATGAAGCTTACCA
CCGTGGCCCCCACCTCCTTCGCAGGGATAAAGGGTTGGCTGAAAACCCGC
GCTTTATGGCTGCCCCGGCAGGTTTCGGAACTGAAAGCGGCCATGACGCG
GGAACTGGACGACTGGTTCGAGGACCCGACCAAGACCAGCGACTGGCTGA
TGAGGCAGCAAGAGCGTATGATAATGGTTGCGGATGAGCCGCGCGCGGGC
GCCGTGCAAGTCATCGCCAGTCGTACCTCAGAAGACGGTAACGGCGGCGA
CAAAAGTGGCGACAATACCGTTTCAACTCCTCTTCCTGCTCATTCTGGTG
CGATTGCCGCAGCTTCCTCGACGGTCCAGTTGGATAGTGGGAAAGGCAGT
AGAAGCACTAGCGGTGGTGGACTGCCACCAGTATTTGTGGACTATTTGGC
CAAAAAGAGTCCTTAG
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protein sequence of NO11G00920.1

>NO11G00920.1-protein ID=NO11G00920.1-protein|Name=NO11G00920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=798bp
MQKLMTQSPPSAVLEGSREAGGRDPSSCLWLQVWLIIRKTNYSQLAPGSG
ERHQRSAETYESYSKKEGRGRRRRGREEGEEEGDEEGVEEEGEEEEEAVE
AEEEEGGKVEEEEKGKEEEGKGEEEAEAEEAEEEEGAEAVEAEEEEAEAE
EAEEEEEEEEEEVIGGPSEDFVGVKPENTSCLGTAVGHVTSCGCTGIWSV
GKLVPMIFATDKKDIVRGEARRAPSGEAAEVSHAVPLSCPTAQQRREDGR
FIQGTARKERVGAPTAGEKKRQSDRDKHEKGAFGQRGVPCFVPQGIRHAN
RIWFANLTCDLRKARRRGQDVGNQGERDCILEYNRTAALIVLGGGWLGSG
SGRGGFLNDGGWPYAARAEDELAQYAKEGNKVGVDAKCFVQKCSLSTHDC
LNNPDCLKGLSCLSKCKGEGTCSTACFAKYGNGVLDNFLHCAVEQQDCVH
VPRDRSRATWTDPDTVGLDKQISPSFQISSLEGRWYKVMGMDARYDCFDC
QVNHFSPKPGGTDTMLADVSFRMPRPRAPGFWENHITEELLGDGSGAHRS
MHSVGRMFGLTFWENWYVIGENAAEDSELPAYKFVYYTGHTLQGNYEGAF
VYARTPELPPELMSSISRVARANGLDPTKFCKIRNACFRPDAPPLEAGTS
SPVDGMKLTTVAPTSFAGIKGWLKTRALWLPRQVSELKAAMTRELDDWFE
DPTKTSDWLMRQQERMIMVADEPRAGAVQVIASRTSEDGNGGDKSGDNTV
STPLPAHSGAIAAASSTVQLDSGKGSRSTSGGGLPPVFVDYLAKKSP*
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Synonyms
Publications