NO11G00690, NO11G00690 (gene) Nannochloropsis oceanica

Overview
NameNO11G00690
Unique NameNO11G00690
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1407
Alignment locationchr11:288867..290273 +

Link to JBrowse

Properties
Property NameValue
DescriptionPeptidylprolyl isomerase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:288867..290273 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023566PPIase_FKBP
IPR001179PPIase_FKBP_dom
Homology
BLAST of NO11G00690 vs. NCBI_GenBank
Match: WP_045053884.1 (FKBP-type peptidyl-prolyl cis-trans isomerase [Aliterella atlantica] >KJH72464.1 peptidylprolyl isomerase [Aliterella atlantica CENA595])

HSP 1 Score: 152.5 bits (384), Expect = 1.400e-33
Identity = 73/117 (62.39%), Postives = 87/117 (74.36%), Query Frame = 0
Query:   90 DSGFQVSESGLKSKIIKEGTGAIPSAGQSVKVHYTGWLDDFESPKKFDSSYDRGKPLSFRAGVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFTMELKSI 207
            D     ++SGLK  ++KEGTGA P  GQ+V VHYTG L+D     KFDSS DRG+P SF+ GVGQVI GWDE L  MK+G++R +IIPP LGYGARGAGGVIPPNATL F +EL  +
Sbjct:   57 DENAVTTDSGLKYIVVKEGTGATPKTGQTVTVHYTGTLED---GSKFDSSRDRGQPFSFKLGVGQVIKGWDEGLSTMKVGDRRTLIIPPELGYGARGAGGVIPPNATLNFDVELLKV 170          
BLAST of NO11G00690 vs. NCBI_GenBank
Match: WP_012332969.1 (MULTISPECIES: FKBP-type peptidyl-prolyl cis-trans isomerase [Methylobacterium] >ACA17569.1 peptidylprolyl isomerase FKBP-type [Methylobacterium sp. 4-46])

HSP 1 Score: 151.4 bits (381), Expect = 3.200e-33
Identity = 80/136 (58.82%), Postives = 88/136 (64.71%), Query Frame = 0
Query:   72 LLGGLALFASGGGPARADDSGFQVSESGLKSKIIKEGTGAIPSAGQSVKVHYTGWLDD-FESPKKFDSSYDRGKPLSFRAGVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFTMELKSI 207
            L  G  L A     + AD   F  + SGLK K    GTG  P AGQ V VHYTGWLDD     KKFDSS DRG+PL F  G GQVI GWDE L  MK+G KR ++IPP LGYGARGAGGVIPPNATL F +EL  +
Sbjct:    7 LRAGALLIAMSSAASSAD---FVTTASGLKYKDDVVGTGPQPQAGQRVSVHYTGWLDDKGRKGKKFDSSVDRGQPLEFAVGTGQVIKGWDEGLSTMKVGGKRTLLIPPDLGYGARGAGGVIPPNATLIFDVELLGV 139          
BLAST of NO11G00690 vs. NCBI_GenBank
Match: WP_099534725.1 (FKBP-type peptidyl-prolyl cis-trans isomerase [Limnothrix sp. PR1529] >OCQ93752.1 peptidylprolyl isomerase [Limnothrix sp. P13C2] >PIB05501.1 peptidylprolyl isomerase [Limnothrix sp. PR1529])

HSP 1 Score: 151.4 bits (381), Expect = 3.200e-33
Identity = 73/120 (60.83%), Postives = 89/120 (74.17%), Query Frame = 0
Query:   88 ADDSGFQVSESGLKSKIIKEGTGAIPSAGQSVKVHYTGWLDDFESPKKFDSSYDRGKPLSFRAGVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFTMELKSIG 208
            AD S    ++SGL+ + +  GTGA P+ GQ+V VHYTG L D    KKFDSS DRG+P SFR GVGQVI GWDE +L M++G +R ++IPP LGYGARGAGGVIPPNATL F +EL  +G
Sbjct:   81 ADASNLTTTDSGLQYEDLTVGTGAAPTPGQNVTVHYTGTLTD---GKKFDSSRDRGQPFSFRIGVGQVIKGWDEGVLSMRVGGRRKLVIPPDLGYGARGAGGVIPPNATLVFDVELLRVG 197          
BLAST of NO11G00690 vs. NCBI_GenBank
Match: WP_068509719.1 (FKBP-type peptidyl-prolyl cis-trans isomerase [Leptolyngbya sp. O-77] >BAU41942.1 FK506-binding protein [Leptolyngbya sp. O-77])

HSP 1 Score: 151.0 bits (380), Expect = 4.100e-33
Identity = 76/119 (63.87%), Postives = 87/119 (73.11%), Query Frame = 0
Query:   89 DDSGFQVSESGLKSKIIKEGTGAIPSAGQSVKVHYTGWLDDFESPKKFDSSYDRGKPLSFRAGVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFTMELKSIG 208
            DD+    +ESGLK   + EGTGA P AGQ+V VHYTG L+D     KFDSS DR +P SFR GVGQVI GWDE L  M++G +R +IIPP LGYGARGAGGVIPPNATL F +EL  IG
Sbjct:   77 DDAAVVTTESGLKYVDLVEGTGAQPQAGQTVIVHYTGTLED---GTKFDSSRDRNQPFSFRLGVGQVIRGWDEGLSTMRVGSRRQLIIPPELGYGARGAGGVIPPNATLVFDVELLRIG 192          
BLAST of NO11G00690 vs. NCBI_GenBank
Match: WP_026103494.1 (FKBP-type peptidyl-prolyl cis-trans isomerase [Pseudanabaena sp. PCC 6802])

HSP 1 Score: 150.6 bits (379), Expect = 5.400e-33
Identity = 76/121 (62.81%), Postives = 87/121 (71.90%), Query Frame = 0
Query:   86 ARADDSGFQVSESGLKSKIIKEGTGAIPSAGQSVKVHYTGWLDDFESPKKFDSSYDRGKPLSFRAGVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFTMELKSI 207
            A A+D+    +ESGLK K IK GTGA P+ GQ+V VHYTG L+D     KFDSS DR  P SF+ GVGQVI GWDE L  MK+G +R +IIPP LGYGARGAGGVIPPNA L F +EL  I
Sbjct:   58 AAANDADLVTTESGLKYKEIKVGTGATPTQGQTVTVHYTGTLED---GSKFDSSRDRNSPFSFKLGVGQVIKGWDEGLSTMKVGGRRQLIIPPELGYGARGAGGVIPPNAVLIFDVELLKI 175          
BLAST of NO11G00690 vs. NCBI_GenBank
Match: OKY73001.1 (peptidylprolyl isomerase [Limnothrix sp. CACIAM 69d])

HSP 1 Score: 150.6 bits (379), Expect = 5.400e-33
Identity = 73/120 (60.83%), Postives = 89/120 (74.17%), Query Frame = 0
Query:   88 ADDSGFQVSESGLKSKIIKEGTGAIPSAGQSVKVHYTGWLDDFESPKKFDSSYDRGKPLSFRAGVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFTMELKSIG 208
            AD S    ++SGL+ + I  GTGA P+ GQ+V VHYTG L D    K+FDSS DRG+P SFR GVGQVI GWDE +L M++G +R ++IPP LGYGARGAGGVIPPNATL F +EL  +G
Sbjct:   81 ADASNLTTTDSGLQYEDITVGTGAAPTPGQNVTVHYTGTLTD---GKQFDSSRDRGQPFSFRIGVGQVIKGWDEGVLSMRVGGRRKLVIPPDLGYGARGAGGVIPPNATLVFDVELLRVG 197          
BLAST of NO11G00690 vs. NCBI_GenBank
Match: WP_106235204.1 (FKBP-type peptidyl-prolyl cis-trans isomerase [Pleurocapsa sp. CCALA 161] >PSB10454.1 peptidylprolyl isomerase [Pleurocapsa sp. CCALA 161])

HSP 1 Score: 150.2 bits (378), Expect = 7.000e-33
Identity = 71/119 (59.66%), Postives = 87/119 (73.11%), Query Frame = 0
Query:   89 DDSGFQVSESGLKSKIIKEGTGAIPSAGQSVKVHYTGWLDDFESPKKFDSSYDRGKPLSFRAGVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFTMELKSIG 208
            D S    ++SGLK  ++KEG GA P  G++V VHYTG L+D     KFDSS DR +P SF+ GVGQVI GWDE +  MK+GE+R ++IPP LGYGARGAGGVIPPNATL F +EL  +G
Sbjct:   64 DLSNATTTDSGLKYIVVKEGDGASPQTGENVTVHYTGTLED---GSKFDSSRDRNRPFSFKLGVGQVIKGWDEGVADMKVGERRTLVIPPELGYGARGAGGVIPPNATLIFDVELLKVG 179          
BLAST of NO11G00690 vs. NCBI_GenBank
Match: WP_085771875.1 (FKBP-type peptidyl-prolyl cis-trans isomerase [Methylocystis bryophila])

HSP 1 Score: 149.8 bits (377), Expect = 9.200e-33
Identity = 80/140 (57.14%), Postives = 94/140 (67.14%), Query Frame = 0
Query:   69 LGSLLGGLALFASGGGPARA-DDSGFQVSESGLKSKIIKEGTGAIPSAGQSVKVHYTGWL-DDFESPKKFDSSYDRGKPLSFRAGVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFTMELKSI 207
            L  +L  L L      PA A +DS    + SGLK+   K GTGA P  GQ+V VHYTGWL ++    KKFDSS DRG+P  F+ GVGQVI GWDE +  MK+G KR +IIPP LGYGARGAGGVIPPNATL F +EL  +
Sbjct:   10 LAGILLSLPLLGVASAPAIALEDSKAVTTLSGLKNIDTKVGTGAEPKTGQTVTVHYTGWLYENGAKGKKFDSSKDRGQPFQFKIGVGQVIPGWDEGVSTMKVGGKRTLIIPPDLGYGARGAGGVIPPNATLLFDVELLDV 149          
BLAST of NO11G00690 vs. NCBI_GenBank
Match: WP_015155971.1 (MULTISPECIES: FKBP-type peptidyl-prolyl cis-trans isomerase [Cyanobacteria] >AFY89428.1 peptidylprolyl isomerase FKBP-type [Chroococcidiopsis thermalis PCC 7203] >PSB44910.1 FKBP-type peptidyl-prolyl cis-trans isomerase [Cyanosarcina cf. burmensis CCALA 770] >PSB55120.1 FKBP-type peptidyl-prolyl cis-trans isomerase [Chroococcidiopsis cubana CCALA 043])

HSP 1 Score: 149.4 bits (376), Expect = 1.200e-32
Identity = 69/111 (62.16%), Postives = 86/111 (77.48%), Query Frame = 0
Query:   96 SESGLKSKIIKEGTGAIPSAGQSVKVHYTGWLDDFESPKKFDSSYDRGKPLSFRAGVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFTMELKSI 207
            ++SGLK  +++EG+G +P  GQ+V VHYTG L+D     KFDSS DRG+P SF+ G GQVI GWDEAL  MK+GE+R ++IPP LGYGARGAGGVIPPNATL F +EL  +
Sbjct:   74 TDSGLKYTVLQEGSGEMPKKGQTVVVHYTGTLED---GSKFDSSRDRGQPFSFKVGTGQVIKGWDEALSTMKVGERRQIVIPPELGYGARGAGGVIPPNATLIFDVELLKV 181          
BLAST of NO11G00690 vs. NCBI_GenBank
Match: WP_106546991.1 (FKBP-type peptidyl-prolyl cis-trans isomerase [Chroococcidiopsis sp. CCALA 051] >PSM47364.1 peptidylprolyl isomerase [Chroococcidiopsis sp. CCALA 051])

HSP 1 Score: 149.4 bits (376), Expect = 1.200e-32
Identity = 71/119 (59.66%), Postives = 89/119 (74.79%), Query Frame = 0
Query:   88 ADDSGFQVSESGLKSKIIKEGTGAIPSAGQSVKVHYTGWLDDFESPKKFDSSYDRGKPLSFRAGVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFTMELKSI 207
            +DD     ++SGLK  +++EG+G +P  GQ+V VHYTG L+D     KFDSS DRG+P SF+ G GQVI GWDEAL  MK+GE+R ++IPP LGYGARGAGGVIPPNATL F +EL  +
Sbjct:   67 SDDKAI-TTDSGLKYTVLQEGSGEMPKKGQTVVVHYTGTLED---GSKFDSSRDRGQPFSFKVGTGQVIKGWDEALSTMKVGERRQIVIPPELGYGARGAGGVIPPNATLIFDVELLKV 181          
The following BLAST results are available for this feature:
BLAST of NO11G00690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_045053884.11.400e-3362.39FKBP-type peptidyl-prolyl cis-trans isomerase [Ali... [more]
WP_012332969.13.200e-3358.82MULTISPECIES: FKBP-type peptidyl-prolyl cis-trans ... [more]
WP_099534725.13.200e-3360.83FKBP-type peptidyl-prolyl cis-trans isomerase [Lim... [more]
WP_068509719.14.100e-3363.87FKBP-type peptidyl-prolyl cis-trans isomerase [Lep... [more]
WP_026103494.15.400e-3362.81FKBP-type peptidyl-prolyl cis-trans isomerase [Pse... [more]
OKY73001.15.400e-3360.83peptidylprolyl isomerase [Limnothrix sp. CACIAM 69... [more]
WP_106235204.17.000e-3359.66FKBP-type peptidyl-prolyl cis-trans isomerase [Ple... [more]
WP_085771875.19.200e-3357.14FKBP-type peptidyl-prolyl cis-trans isomerase [Met... [more]
WP_015155971.11.200e-3262.16MULTISPECIES: FKBP-type peptidyl-prolyl cis-trans ... [more]
WP_106546991.11.200e-3259.66FKBP-type peptidyl-prolyl cis-trans isomerase [Chr... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002202NSK002202Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00690.1NO11G00690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590872gene_4937Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100016g72gene5350Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00690.1NO11G00690.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00690 ID=NO11G00690|Name=NO11G00690|organism=Nannochloropsis oceanica|type=gene|length=1407bp
CTGGTAGCGGCGGCATATCTGTCTTTTTGGATGCGTTGTGTGTAGTTTGG
TGTGAATGCCACCGAAGAAGCACAACAACTCGTGCCGACTCGCGGTTTTG
CGTGTTGTGTCTTTTTCAAGGAAACCGCTGCTTTATCAGAGACCGCACGC
CAACCAGCGCCTTGTTTGTTTTCTGCGTGAGTGCTTGCATTTCACACCTG
TAGACACATGAGTTTGTTACTTTGCTTGGTCGTCGGTCTGAACTTCTATA
ACCGTAACACCCAAAAATAGATGCGTTTTGAAGCTGTATTATTGGTCCTT
GCTGCCTGCACACCCGCAGCTAGCTTCATGATGCCCATTAGCCGTCGTGC
CTCAGGCCAGGTCGTCAAGGCCGCCGTGGCCTTCCGCCCCTTCGGCTCTC
AGgtgaacatggcggggagagagggttagagtgtcgggagggttggatgg
tgaaaagcaagatggactgggacgggaggttttggaggccgcatccgcac
gcatcttaaatgtgcattgaatttataaatcgacattcacctctctctac
gaccagGCGACGCTGAAGCGTGGTGCACCCCAGATGAAAGAGCTGGTCAG
CCGCCAGGAGCACCTACGCGCAGCCACATTGGGCTCCTTGCTGGGGGGCC
TTGCGCTCTTCGCGTCGGGGGGTGGACCTGCTCGCGCGGATGACTCTGGG
TTCCAGGTATCCGAGTCGGGCCTCAAGTCCAAGATCATTAAGGAAGGCAC
GGGCGCCATTCCTTCTGCTGgtgggttttaggctgtcggaaggaaagtgg
tgtagaggtgtgctgtggcacaagaaaaatacctcgccatctaccacata
ctcacatgcccctcctcctccttaaccccctaccctaacagGGCAATCCG
TTAAGGTTCACTACACGGGTTGGTTGGACGACTTCGAGTCTCCCAAGAAG
TTCGACTCTTCCTACGACCGTGGAAAGCCCTTGTCCTTCCGCGCGGGCGT
CGGGCAGGTCATCGCGGGTTGGGATGAGGCCTTGCTGCAGATGAAGATTG
GAGAGAAGAGGAATGTGATCATTCCCCCTGGATTGGGGTACGGTGCGCGA
GGGGCGGGGGGAGTGATTCCTCCGAATGCCACGCTCTACTTCACGATGGA
GTTGAAAAGCATCGGTTAAGGTGGTAAAAAAGCAGGAGAATGGATGGATC
GAATCGTGCGTCCCATTAGCACTTGAAGTGCCTAGAGGGGGAGAAAAAGA
GTGGGAAACATTGAGGAAGCAGCGTATTGGAGCCTGCCAGCAGGTCTCTG
AAGGGAGACAAGAGGGAAGAGAGAACTTTGATAGACGAAGCAAGATGGCG
TATGCTTGCATGCATTAATGCTGAAGAAAAAAGAAGAAAACAACAACATA
AGCGCGA
back to top

protein sequence of NO11G00690.1

>NO11G00690.1-protein ID=NO11G00690.1-protein|Name=NO11G00690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=208bp
MRFEAVLLVLAACTPAASFMMPISRRASGQVVKAAVAFRPFGSQATLKRG
APQMKELVSRQEHLRAATLGSLLGGLALFASGGGPARADDSGFQVSESGL
KSKIIKEGTGAIPSAGQSVKVHYTGWLDDFESPKKFDSSYDRGKPLSFRA
GVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFT
MELKSIG*
back to top
Synonyms
Publications