NO11G00690, NO11G00690 (gene) Nannochloropsis oceanica

Overview
NameNO11G00690
Unique NameNO11G00690
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1407
Alignment locationchr11:288867..290273 +

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Properties
Property NameValue
DescriptionPeptidylprolyl isomerase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:288867..290273 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023566PPIase_FKBP
IPR001179PPIase_FKBP_dom
Homology
BLAST of NO11G00690 vs. NCBI_GenBank
Match: EWM25144.1 (peptidylprolyl isomerase [Nannochloropsis gaditana])

HSP 1 Score: 326.6 bits (836), Expect = 5.500e-86
Identity = 166/208 (79.81%), Postives = 185/208 (88.94%), Query Frame = 0
Query:    1 MRFEAVLLVLAACTPAASFMM-PISRRASGQVVKAAVAFRPFGSQATLKRGAPQMKELVSRQEHLRAATLGSLLGGLALFASGGGPARADDSGFQVSESGLKSKIIKEGTGAIPSAGQSVKVHYTGWLDDFESPKKFDSSYDRGKPLSFRAGVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFTMELKSIG 208
            M     L+++A+ T  +SFMM P+SR A+G +VKAAVA RP  SQ  ++RG+PQMKEL++RQ+HLR ATLGSLLGG ALFASGGG ARA+D GF+ + SGLK KI+KEGTGAIP+AGQSVKVHYTGWLDDFESPKKFDSSYDRGKPLSFRAGVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFTMELKSIG
Sbjct:   38 MHLPTFLVLIASLTSTSSFMMTPLSRHAAGHLVKAAVACRPGISQMAVRRGSPQMKELINRQQHLRRATLGSLLGGFALFASGGGVARAED-GFETTSSGLKYKILKEGTGAIPAAGQSVKVHYTGWLDDFESPKKFDSSYDRGKPLSFRAGVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFTMELKSIG 244          
BLAST of NO11G00690 vs. NCBI_GenBank
Match: EJK71879.1 (hypothetical protein THAOC_06637 [Thalassiosira oceanica])

HSP 1 Score: 172.6 bits (436), Expect = 1.300e-39
Identity = 84/141 (59.57%), Postives = 100/141 (70.92%), Query Frame = 0
Query:   66 AATLGSLLGGLALFASGGGPARADDSGFQVSESGLKSKIIKEGTGAIPSAGQSVKVHYTGWLDDFESPKKFDSSYDRGKPLSFRAGVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFTMELKSI 207
            AA   S+ GGL         A+ADD  F  ++SG+K K+ KEG GAIPS GQ VK HYTGWLD F+S KKFDSS DRG+P  F+ G GQVI GWDE+   MK+GE+R +I+PP L YG RGAGGVIPPN+TLYF +EL  I
Sbjct:   38 AAVTASVFGGLPQI------AKADDD-FITTDSGMKYKVTKEGDGAIPSPGQLVKAHYTGWLDSFDSEKKFDSSRDRGRPFQFKVGQGQVIRGWDESFSTMKVGERRQIILPPRLAYGERGAGGVIPPNSTLYFDVELLGI 171          
BLAST of NO11G00690 vs. NCBI_GenBank
Match: GAX17466.1 (peptidylprolyl isomerase [Fistulifera solaris])

HSP 1 Score: 170.2 bits (430), Expect = 6.600e-39
Identity = 84/146 (57.53%), Postives = 105/146 (71.92%), Query Frame = 0
Query:   60 RQEHLRAATLG-SLLGGLALFASGGGPA-RADDSGFQVSESGLKSKIIKEGTGAIPSAGQSVKVHYTGWLDDFESPKKFDSSYDRGKPLSFRAGVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFTMEL 204
            R+  L  A +G S +G   + ++   PA  A+D GF  ++SGLK K+IKEGTG IP+ GQ+VK HYTGWLD F+SPKKFDSS DRG+P +F  G G+VI GWDE    M +GE+R +IIPP LGYG RGAGG+IP  ATLYF +EL
Sbjct:  494 RRSFLSQAVVGASSIGATTVIST---PAFAAEDDGFITTDSGLKYKVIKEGTGGIPAPGQTVKAHYTGWLDGFDSPKKFDSSRDRGRPFTFPVGAGRVIRGWDECFSTMSVGERRQIIIPPRLGYGDRGAGGLIPGGATLYFDVEL 636          
BLAST of NO11G00690 vs. NCBI_GenBank
Match: XP_002179220.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49043.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 167.2 bits (422), Expect = 5.600e-38
Identity = 79/124 (63.71%), Postives = 92/124 (74.19%), Query Frame = 0
Query:   84 GPARADD----SGFQVSESGLKSKIIKEGTGAIPSAGQSVKVHYTGWLDDFESPKKFDSSYDRGKPLSFRAGVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFTMEL 204
            G A+AD     S F  +ESGLK K+ KEGTGA+P  GQ+VK HYTGWL+ FESPKKFDSS DR +P  FR G GQVI GWDE+   M +GE+R +IIPP LGYG RGAGG+IP  ATLYF +EL
Sbjct:   46 GVAKADGQDTYSDFITTESGLKYKVTKEGTGAVPEPGQTVKAHYTGWLEGFESPKKFDSSRDRNRPFQFRVGAGQVIRGWDESFGAMAVGERRQIIIPPRLGYGDRGAGGIIPGGATLYFDVEL 169          
BLAST of NO11G00690 vs. NCBI_GenBank
Match: XP_009039142.1 (hypothetical protein AURANDRAFT_29615 [Aureococcus anophagefferens] >EGB06192.1 hypothetical protein AURANDRAFT_29615 [Aureococcus anophagefferens])

HSP 1 Score: 157.9 bits (398), Expect = 3.400e-35
Identity = 77/132 (58.33%), Postives = 96/132 (72.73%), Query Frame = 0
Query:   73 LGGLALFASGGGPARADDSGFQVSESGLKSKIIKEGTGAIPSAGQSVKVHYTGWLDDFES-PKKFDSSYDRGKPLSFRAGVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFTMEL 204
            + G+A  A+      +   GF  +ESGL+ K +KEG GA+P+ GQ+VKVHYTGWL+DF+    KFDSSYDRGKPL+F  G G+VI GWDEALL MK+G  R V+IP  +GYGA+GAGG+IP  ATLYF M L
Sbjct:   10 VSGVAASAAALPRLASAADGFTKTESGLQFKDLKEGDGAVPAPGQTVKVHYTGWLNDFDDLDGKFDSSYDRGKPLTFAVGTGRVIKGWDEALLTMKVGGTRRVVIPSEIGYGAKGAGGIIPGGATLYFEMNL 141          
BLAST of NO11G00690 vs. NCBI_GenBank
Match: XP_002289399.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED92936.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 157.1 bits (396), Expect = 5.700e-35
Identity = 71/114 (62.28%), Postives = 84/114 (73.68%), Query Frame = 0
Query:   93 FQVSESGLKSKIIKEGTGAIPSAGQSVKVHYTGWLDDFESPKKFDSSYDRGKPLSFRAGVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFTMELKSI 207
            +  +ESG+K  + KEG GAIP   Q VK HYTGWLD FES KKFDSS DRG+P  F+ G GQVI GWDEA   MK+GE+RN+I+P  L YG RGAGG+IP  ATLYF +EL +I
Sbjct:    2 YTTTESGMKYLVTKEGDGAIPQQNQLVKAHYTGWLDGFESGKKFDSSRDRGRPFQFKVGAGQVIRGWDEAFSTMKVGERRNIILPSRLAYGDRGAGGIIPGGATLYFDVELLAI 115          
BLAST of NO11G00690 vs. NCBI_GenBank
Match: OEU21863.1 (peptidyl-prolyl cis-trans isomerase B [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 154.8 bits (390), Expect = 2.900e-34
Identity = 67/107 (62.62%), Postives = 83/107 (77.57%), Query Frame = 0
Query:  100 LKSKIIKEGTGAIPSAGQSVKVHYTGWLDDFESPKKFDSSYDRGKPLSFRAGVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFTMELKSI 207
            +K K+ KEGTG IP++GQ+VK HYTGWLD F++ KKFDSS DRG+P +F  G GQVI GWDE+   MK+GE+R +I+PP L YG RGAGG+IP  ATLYF +EL  I
Sbjct:    1 MKYKVTKEGTGGIPTSGQTVKAHYTGWLDGFDTDKKFDSSRDRGRPFTFSVGKGQVIRGWDESFSSMKVGERRQIILPPRLAYGDRGAGGIIPGGATLYFDVELLGI 107          
BLAST of NO11G00690 vs. NCBI_GenBank
Match: OLP86985.1 (Dihydroorotate dehydrogenase (fumarate) [Symbiodinium microadriaticum])

HSP 1 Score: 154.5 bits (389), Expect = 3.700e-34
Identity = 77/136 (56.62%), Postives = 95/136 (69.85%), Query Frame = 0
Query:   72 LLGGLALFASGGGPARADDSGFQVSESGLKSKIIKEGTGAIPSAGQSVKVHYTGWLDDFESPKKFDSSYDRGKPLSFRAGVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFTMELKSIG 208
            LLG L LF      AR    GF  + SGL+ K+++EG+G  P  GQ +   YTGWL+DFES KKFDSS DR +PL F+ G+G+VI GWDE LL MK+GE+R +I+PPGLGYG R A G IP  +TLYF +ELKS G
Sbjct:   16 LLGPLLLFPQAAFAAR---DGFTETSSGLQYKVLQEGSGESPRTGQMIAADYTGWLEDFESEKKFDSSRDRRQPLKFQVGIGKVIKGWDETLLDMKVGERRQIIVPPGLGYGNR-AIGPIPAGSTLYFDVELKSPG 147          
BLAST of NO11G00690 vs. NCBI_GenBank
Match: CEM06696.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 154.1 bits (388), Expect = 4.900e-34
Identity = 80/154 (51.95%), Postives = 104/154 (67.53%), Query Frame = 0
Query:   60 RQEHLRAATLGSLLGGLAL-----FASGGGPARADD--SGFQVSESGLKSKIIKEGTGAIPSAGQSVKVHYTGWLDDFESPKKFDSSYDRGKPLSFRAGVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFTMELKSI 207
            R+    +A   +L+GG AL       +    A A D   GF+ S SGL  ++++ G+G  P+  Q V+V YTGWLD+FES KKFDSS DR +P  F AG GQVI GWDEA+L M++GEKR +IIPP LGYG RGAG VIPP+ATLYF ++L ++
Sbjct:   48 RRRFFESAAGSALIGGGALVTQHILLAPRSVAMAQDVPPGFEKSASGLMYQVVEAGSGGKPNQNQKVRVDYTGWLDNFESDKKFDSSVDRRRPFEFFAGGGQVIKGWDEAILSMQVGEKRRLIIPPELGYGKRGAGRVIPPDATLYFEVKLLAL 201          
BLAST of NO11G00690 vs. NCBI_GenBank
Match: WP_015926978.1 (FKBP-type peptidyl-prolyl cis-trans isomerase [Methylobacterium nodulans] >ACL55265.1 peptidylprolyl isomerase FKBP-type [Methylobacterium nodulans ORS 2060])

HSP 1 Score: 153.7 bits (387), Expect = 6.400e-34
Identity = 75/122 (61.48%), Postives = 87/122 (71.31%), Query Frame = 0
Query:   86 ARADDSGFQVSESGLKSKIIKEGTGAIPSAGQSVKVHYTGWLDD-FESPKKFDSSYDRGKPLSFRAGVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFTMELKSI 207
            A A  + F  + SGLK K    GTG  P+AGQ+V VHYTGWLD+     KKFDSS DRG+PL+F  G GQVI GWDE L  MK+G KR ++IPP LGYGARGAGGVIPPNATL F +EL  +
Sbjct:   18 AAASSADFTTTPSGLKYKDDVVGTGPAPAAGQTVSVHYTGWLDEKGRKGKKFDSSVDRGQPLNFAVGTGQVIKGWDEGLSTMKVGGKRTLVIPPDLGYGARGAGGVIPPNATLIFDVELLGV 139          
The following BLAST results are available for this feature:
BLAST of NO11G00690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25144.15.500e-8679.81peptidylprolyl isomerase [Nannochloropsis gaditana... [more]
EJK71879.11.300e-3959.57hypothetical protein THAOC_06637 [Thalassiosira oc... [more]
GAX17466.16.600e-3957.53peptidylprolyl isomerase [Fistulifera solaris][more]
XP_002179220.15.600e-3863.71predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_009039142.13.400e-3558.33hypothetical protein AURANDRAFT_29615 [Aureococcus... [more]
XP_002289399.15.700e-3562.28predicted protein, partial [Thalassiosira pseudona... [more]
OEU21863.12.900e-3462.62peptidyl-prolyl cis-trans isomerase B [Fragilariop... [more]
OLP86985.13.700e-3456.62Dihydroorotate dehydrogenase (fumarate) [Symbiodin... [more]
CEM06696.14.900e-3451.95unnamed protein product [Vitrella brassicaformis C... [more]
WP_015926978.16.400e-3461.48FKBP-type peptidyl-prolyl cis-trans isomerase [Met... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002202NSK002202Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00690.1NO11G00690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590872gene_4937Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100016g72gene5350Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00690.1NO11G00690.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00690 ID=NO11G00690|Name=NO11G00690|organism=Nannochloropsis oceanica|type=gene|length=1407bp
CTGGTAGCGGCGGCATATCTGTCTTTTTGGATGCGTTGTGTGTAGTTTGG
TGTGAATGCCACCGAAGAAGCACAACAACTCGTGCCGACTCGCGGTTTTG
CGTGTTGTGTCTTTTTCAAGGAAACCGCTGCTTTATCAGAGACCGCACGC
CAACCAGCGCCTTGTTTGTTTTCTGCGTGAGTGCTTGCATTTCACACCTG
TAGACACATGAGTTTGTTACTTTGCTTGGTCGTCGGTCTGAACTTCTATA
ACCGTAACACCCAAAAATAGATGCGTTTTGAAGCTGTATTATTGGTCCTT
GCTGCCTGCACACCCGCAGCTAGCTTCATGATGCCCATTAGCCGTCGTGC
CTCAGGCCAGGTCGTCAAGGCCGCCGTGGCCTTCCGCCCCTTCGGCTCTC
AGgtgaacatggcggggagagagggttagagtgtcgggagggttggatgg
tgaaaagcaagatggactgggacgggaggttttggaggccgcatccgcac
gcatcttaaatgtgcattgaatttataaatcgacattcacctctctctac
gaccagGCGACGCTGAAGCGTGGTGCACCCCAGATGAAAGAGCTGGTCAG
CCGCCAGGAGCACCTACGCGCAGCCACATTGGGCTCCTTGCTGGGGGGCC
TTGCGCTCTTCGCGTCGGGGGGTGGACCTGCTCGCGCGGATGACTCTGGG
TTCCAGGTATCCGAGTCGGGCCTCAAGTCCAAGATCATTAAGGAAGGCAC
GGGCGCCATTCCTTCTGCTGgtgggttttaggctgtcggaaggaaagtgg
tgtagaggtgtgctgtggcacaagaaaaatacctcgccatctaccacata
ctcacatgcccctcctcctccttaaccccctaccctaacagGGCAATCCG
TTAAGGTTCACTACACGGGTTGGTTGGACGACTTCGAGTCTCCCAAGAAG
TTCGACTCTTCCTACGACCGTGGAAAGCCCTTGTCCTTCCGCGCGGGCGT
CGGGCAGGTCATCGCGGGTTGGGATGAGGCCTTGCTGCAGATGAAGATTG
GAGAGAAGAGGAATGTGATCATTCCCCCTGGATTGGGGTACGGTGCGCGA
GGGGCGGGGGGAGTGATTCCTCCGAATGCCACGCTCTACTTCACGATGGA
GTTGAAAAGCATCGGTTAAGGTGGTAAAAAAGCAGGAGAATGGATGGATC
GAATCGTGCGTCCCATTAGCACTTGAAGTGCCTAGAGGGGGAGAAAAAGA
GTGGGAAACATTGAGGAAGCAGCGTATTGGAGCCTGCCAGCAGGTCTCTG
AAGGGAGACAAGAGGGAAGAGAGAACTTTGATAGACGAAGCAAGATGGCG
TATGCTTGCATGCATTAATGCTGAAGAAAAAAGAAGAAAACAACAACATA
AGCGCGA
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protein sequence of NO11G00690.1

>NO11G00690.1-protein ID=NO11G00690.1-protein|Name=NO11G00690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=208bp
MRFEAVLLVLAACTPAASFMMPISRRASGQVVKAAVAFRPFGSQATLKRG
APQMKELVSRQEHLRAATLGSLLGGLALFASGGGPARADDSGFQVSESGL
KSKIIKEGTGAIPSAGQSVKVHYTGWLDDFESPKKFDSSYDRGKPLSFRA
GVGQVIAGWDEALLQMKIGEKRNVIIPPGLGYGARGAGGVIPPNATLYFT
MELKSIG*
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Synonyms
Publications