NO11G00300, NO11G00300 (gene) Nannochloropsis oceanica

Overview
NameNO11G00300
Unique NameNO11G00300
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6919
Alignment locationchr11:125676..132594 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:125676..132594 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO11G00300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL110nonsL110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR067ncniR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00300.1NO11G00300.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO11G00300.2NO11G00300.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|319052gene_10257Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00300.1NO11G00300.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO11G00300.2NO11G00300.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00300 ID=NO11G00300|Name=NO11G00300|organism=Nannochloropsis oceanica|type=gene|length=6919bp
AACAGGGCCAAAGGGCAAAGAAGAGAAAACAAGAGGACAATAAAGGGTCG
TCTGCAGCAGAGGATGCGTGCCGGGGCCTCGCCCTGTCCGACTGGATGGT
gtaagtgctccatgtcctccccctccctccctcccctcctacattcttcc
ctttagcatatacctcttgctttatatttctttctttcaccctatacatt
atcaagctaaaggtacatggaccaggtcatcagtgtccagtcatgtcttt
ccccattcgataaaatcagccagccttttctcttatccctctctttcctc
cccgtctccctctccctccctacacctctagCCTACACTGACAGGCCTGT
TAAGCAGCCTATCACGGAGGCAGATGCGGCGACAGCACGCTTGAAGCATT
TTGTGTATCAAAgtaaggagtatgggaaggaggggggaagagtggaggaa
gggaggagagagggaaggcgaaggcggccggaagcaggcaagggaaggag
ggaacaaggagacaaccagtgcactgcttagggtgtaagagggagggggg
gaaagaggaagggtgagagcaggaagagattgttctccagactgaaatcc
cacaattttcaattcaattcactcttctttacatagGTCGGGGCTCCCTC
TCTCCACCTAGACAGCAACAGCTGCAGCTGCAGCAGCAGCACCATCAACA
GGAGCAGGAGCGTAATCAGGAAAGAGTAAATGGAGGGAGGAGGAGGATGA
CCCCTTCCCCTCCTCTTCCTCCTCGTGGTCGTCCTCCTACTCATCCTCGT
CGATACCTGTCCCCAGCAGCGGGGCGATATGGCGTAATGAGCGACGAAGA
GGAGGAGGAGGAGGGAGGGAGGGAGGGAGAGGAGGAGGGAGGGAGGAGGT
GGGCGGGGGAGGGAGAGATGGAGTGGGGAGAGTATGAGGAGGAGGAGGAG
GAGGAGGAGGGGGAGGGAGGTGGAGAGTACTACGCGAATGGAGGAGGAGA
AGGCGAAGGCGAATGGGAGGGCGGGAACGGGGGGAAGGAGGAGGAAGCAG
CGGTGGTGCACATGTCCTTCGAAGAAAGgttggcccttcctccttccctt
cctccttcccttcctccatcagcctcccgcttttatcacctgcgaattgt
gcaaggaggtcaagggcactcacaattctgtgtcctcttccctccctctc
tccctccctccctcccccccttctaccccctccctccttcctttccccca
gCGAGCTCATGGCGACCCAGCAGCTTCGCCTCACCCTGGCACGAGAAACA
GCAACAGAAGCCCAAAAATACGAAGACGCGTACAGGGAGGCCTTCCGGAG
GGAGGAGGGGAGGGAGGAGGGAGGGAGgtgagtagaagaggagggcagga
gagagggagggagggagggagggaggcagagataaaggagattgagtatt
tccaaacacgtctctgacttggaaatcgttcaccgcctccctccctccct
tcctccccccctccaacccttcggtccctccctccctcccttcctccctc
cctcaagCCCCTCCTTGGACGATCAGCGCGCTTACTGCCAGAAGGAAGAG
GCCGCGGTCCACACAGAGCGTCATCGACTCAATCACTTGCTTGAAGCAGC
CACACGCGAGAAGAGGATGTTCGAAgtatgttaccctccctccctccctc
cctccctccctccctccctccctccctccctcccttcctccctccctccc
tcccctccctttttatccacccatttctcttcgtccccgctcactctccc
tcccttcctccctccctccctgccttagGAAGCAATCCAGACTCTCTCCA
CCCTCCTCTCCTCCTCCCCCCTCTCCCTCCCCTCCCTCCAATCCGCCCTT
GCTCATGACGCCCTCGTCCTCGCCCGCGAACGGGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGAGGAGAGGGAGGCCGAGGAAATCTTGGAGgtcc
gttcacagtggcgagaaggagggaggaagggagggagggagggagggagg
gaggaaacgcgttcataccgttctgtccgtgtgaccatctatccctattc
atccctccctccctccctccctccctccctccctccctccctccctccct
tcccagCATGCCCAAGCCCTCGAGAACCTCCTAGCCCCCCTCATGCAGGC
GTGGGAGGACGCCTCCATCCCATCCTCCTCCCCTTCCACGGGGTCAGACC
AAAGACGGAGAAGACAGCTGGTCGTCTCGCAACGGATAAAAACGGCTCTG
GAAAGCGATTCCCTTCCTCAACAGCAACGGgtgcgcccgtccctccctcc
ctccctccctccctccaacctttccaccgcctctaacgaactgtccacct
cttccctccctccttccctctttccatcccccccctcagGCCCTCCTCCC
CCGCCTCCTCCCCCCGGGTGACGCCTACCCCTCCCTCCATCGCTTCCTCC
GCCAGCGCCAAGACATTCTTCACGCTCTTAACTACTCTCCTCCCCCTCCC
CCTCCTCCTGTCCCTGCTCCTGCACCGACCCCTCCCTCCCTCCCTCCCTC
GGTACCTCCTCCCATACCTCCTGGCACCGTTGGAACTGCTGCTGCTGCTG
CTGCTGCTGCTGCTCCCTCGGCTCTCAGTGGCAAGACCGgtaatcttaaa
gcacagatcgcctcccatgtctgcctcccttcccaccccttcctccctcc
ctcccaccctccctcccaccctccctccctccctccctccctccctccct
ccctccctccctccctccctccctccctccctccctagACCACCCCTCTC
CCCTCCATGAGGCGGCTCAAAGCCTTGCAAAATGGAACTTATTTCTCTCC
AGCTGCGGAACGGGAGATATTGAGgtagggagggagggagggagcgaggg
agggagggagggagggagggaaagttgagacgttggcttcttcatatcag
aatctgtgcttattactttctatccctccctccctccctccctccctccc
tccctccagGCCCGCCTCCAGCGACACGAAGACGCTCTCTCCAATTATCT
CGGCCACTTAAAAACCACCCGGCAATCCATCGCgtacgtccctcccttcc
tccctccctccctccctccctcccctccttttcgccctctattccttccc
tttcacatcctctccctcatcccctctttctgttcctatatttatttaat
cccctcccctccctctctccctcccacccacattctctcttactttccac
tccctttctccctccctccctccctccctgccccccccttcagTGTGGTG
ATGCGTCGGGGTGGCCTACAGAGCGACGACCAGCCATCCCTCCTCCAGTA
CATTCGAACAGGAGGAGGACCGTCATCCTCCATCTCAATGCAGgtaggta
ggtaggtagggagggagggagggcgggagggagggagcctgccccctctc
agacaacttgacgttcctctctaactacccttaatcatccatatccctcc
ctccctccctccctccctccctccctccctccctccctccctccctaccc
cagGACCGCTTCCTAGCCTACCGAGCCCTCTTCCGGGCTATCATCGGCTC
GAAGGGCAAAGGCCCCCTCTGCCACGCCGATAAGTGCACGCGGAAGgtac
ttaccctccctccctccctccctccctccctccctccctccctccctccc
tctcttccttcctcacttacattctctctgctcaaacttatgttcgtctt
tccttccctccctccctccctccctccctccctccctctcttccttcctc
actttcattctctctgctcaaacttatgttcgtctttccttccctccctc
cctccctccctccccccctccctccctccctctctagGGTATCTCCGAGC
TGTGGATTGTCATCTACGCTCAGATACTCCTCGCGCCTTGCGTGGTGTTT
TCCCAGgtggggggggagggagggagggagggagggagggagggagggag
ggagggagggagggagggagggaggttgattttcaagggaagaaggatta
gggagcgagggagggagggagggagggacggacagatgaaggaggctctt
gataaatctcggtctttattcaaccctccctccctccctcccttcctccc
tccctccctaagACGCTTCCCCTCAACGGCCGGGGGGCCTCTCTCTCCAT
GACAGACGTCCTATGGGTCGCTCTTCAAGATTATGCGCCTGCTGCCTTGC
CCGTGTCCTCGgtacgcccctccctccctccctccctccctccctccctt
cctccctccctcccttcctgacacaccccttgatgacttcatccatttcc
tccccccctccctccctccctccctccctctttccttccttccttcactt
ccagGAGAATCTCACCTTCTCCAAGGAGGCATTAGCCGCCATCGAAAGCG
ATGTTGCCAAGCGgtaagccctccgtccctccgtccctccctccgtccct
ccctccgtccctccctccgtccctccctccgtccctccctccgtccctcc
ctccgtccctccgtccgtccctccctccgtccgtccctccgtccgtccct
ccctccgtccctccctccgtccctccctccgtccctccgaattctcattt
cctctcctcccaccctccctccctcccctcctcagCGTCTCCCCCGTCAC
ATTTGCCAATACGTTTGGCCTTACATCCAAGGACGGATGGTACCTCAAGA
AGCCCACGCGAGTGCTCCGCCTCCTGGCGCAGgtaagtagggagggaggg
agggagggagggtgggagggagggagggaaacttcttcacagttgtaacc
ggaactcggtctttccccctcctccctccctccctccctccctagATGAT
GATTACTTTGGCCACTCCCTACAACGCCCGGCGTTTCCAAGTAACGGTCA
AAAGCTGGACCGATCCCATCATCCTTCAGGAAGCCCAGGGAGgtgaggag
ggagggagggaggaagggagggacggacggaaggagggacctcagattct
caccatttaacaaaccctccctccctccctccctcttcctccctccctcc
ctccctccgtcttcctccctcccctcctccctccctcagTCCCTCCCCGC
CTCCCGTTCAACACCGACTCCCTGTGGGAATGGATAGTGTCTTACCTTAA
ATCTCTCGTCCGGAAACACCAGGCCAAGAAATgtacgtatgcattcgatc
ggccctccatccctcacttcctccctcccttcctcctttcctccctccct
ccctccctccctcccttcctccctcccaccctcccttcctccctcccacc
ctccctcctccccaccctgcctctttttttggagcagtgggtctgcttcc
tctcctctcatgccccccctccctctccctccctccttccctccctccct
ccctccctccctccctccctccctccctccctagCCATCATCATGCCAGA
CCTCGTCTGTTTCACGGCCTTCATTTCCCATGACCTCCCCTGTGCCTTCC
TCGACCTCGGTGAGGACGCCGGAGAGCAGCAGCAGCGAGGGACAGTCGTT
GATCCATGGACTCATTTCAATgcaagtgttccctccctccctccctccct
tcctccctccctccctctatccctctattcctttctcgagcgggatgcaa
gttttggtgttgatggttcctccctccctccctccctcccccgctccctg
cagGACGAGATGGATCGCGCTTACCTCAACGAACAAGAGCCTATGCTCGG
GGTTTTCTCCCTCCTTCGGGAACGGTACGGCCCGGAGCGCCTCAGTATCC
TGGCCAAgtacgtccttcctccctccctccctccctcccttcctcttcac
tctcaatgacatctgctttcgcctcctcctctctttccttcttccttcct
tcccttcctctcttcctcttcccctcttcttcctccgttctcactacgtc
cttccccctccctccctccctccctcccgctctcccgctctccctagGCT
CATCGCCACCGAAGGTTATGGGAAGCCCCTCCGGTGGTTCCTCGATCATC
GAGCCGATTTAAAATCTCTCTTCAAGgtaccttctcttcctcccttcctc
cctccctccttcctcctccccctttcttgttccccctcctaacgaccctc
cctccctccctccttccctccctccctccctccctccctccctccctccc
tccctccctccctccagACCTGGGAGCTGAATGCCTCCCGTTCCATGGGT
TATAATGTCGACGATCTTCTCCCTGAAAATTGGCTTCTCTCGCCCGCCAT
CGCCCGCTCAGGAGTGCCTCCCAAGgtacgcccgcccctccctccctccc
tccctccctccctacttccagcccctggtttactcgtacacaaactcact
catccactgaggccttccttccttccttccctttgtcccccccccctccc
tccctacccgcctccctccctccccccttcctcagATCATCTTCTTCTGT
CTCACTCCCGGCTGTCTGGAGCCTGCCCTTGCGTTCCCTCCCTCCCTTGC
TCCCTACCCCCTCCCTTCCTCTTGCCTCCGCCACAGCGCTCCCAAGACAC
GGGGGGGGGGAAGGGAGGGGGGGAGGAAGGAGGAGGACGCGGAGAGGTAC
GAGGGAGTGAAGGCAGTGAGGGAGGAAATGAATTTGAAGCCAAACGCTGT
TTTCGTCAAGCATCCGTGGATGGAGGGGGGAGGAGGGAGGAAGTAGGGAG
GGAGGGACGCGGGGGAGGGAAACGATAGCGCATGTGAGAGAAGGAAGGAA
ATAAATTTGTCTAAGAGTG
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protein sequence of NO11G00300.1

>NO11G00300.1-protein ID=NO11G00300.1-protein|Name=NO11G00300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=984bp
MRAGASPCPTGWSYTDRPVKQPITEADAATARLKHFVYQSRGSLSPPRQQ
QLQLQQQHHQQEQERNQERVNGGRRRMTPSPPLPPRGRPPTHPRRYLSPA
AGRYGVMSDEEEEEEGGREGEEEGGRRWAGEGEMEWGEYEEEEEEEEGEG
GGEYYANGGGEGEGEWEGGNGGKEEEAAVVHMSFEESELMATQQLRLTLA
RETATEAQKYEDAYREAFRREEGREEGGSPSLDDQRAYCQKEEAAVHTER
HRLNHLLEAATREKRMFEEAIQTLSTLLSSSPLSLPSLQSALAHDALVLA
RERGREGGREGGREEEREAEEILEHAQALENLLAPLMQAWEDASIPSSSP
STGSDQRRRRQLVVSQRIKTALESDSLPQQQRALLPRLLPPGDAYPSLHR
FLRQRQDILHALNYSPPPPPPPVPAPAPTPPSLPPSVPPPIPPGTVGTAA
AAAAAAAPSALSGKTDHPSPLHEAAQSLAKWNLFLSSCGTGDIEARLQRH
EDALSNYLGHLKTTRQSIAVVMRRGGLQSDDQPSLLQYIRTGGGPSSSIS
MQDRFLAYRALFRAIIGSKGKGPLCHADKCTRKGISELWIVIYAQILLAP
CVVFSQTLPLNGRGASLSMTDVLWVALQDYAPAALPVSSENLTFSKEALA
AIESDVAKRVSPVTFANTFGLTSKDGWYLKKPTRVLRLLAQMMITLATPY
NARRFQVTVKSWTDPIILQEAQGVPPRLPFNTDSLWEWIVSYLKSLVRKH
QAKKSIIMPDLVCFTAFISHDLPCAFLDLGEDAGEQQQRGTVVDPWTHFN
DEMDRAYLNEQEPMLGVFSLLRERYGPERLSILAKLIATEGYGKPLRWFL
DHRADLKSLFKTWELNASRSMGYNVDDLLPENWLLSPAIARSGVPPKIIF
FCLTPGCLEPALAFPPSLAPYPLPSSCLRHSAPKTRGGGREGGRKEEDAE
RYEGVKAVREEMNLKPNAVFVKHPWMEGGGGRK*
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protein sequence of NO11G00300.2

>NO11G00300.2-protein ID=NO11G00300.2-protein|Name=NO11G00300.2|organism=Nannochloropsis oceanica|type=polypeptide|length=908bp
MTPSPPLPPRGRPPTHPRRYLSPAAGRYGVMSDEEEEEEGGREGEEEGGR
RWAGEGEMEWGEYEEEEEEEEGEGGGEYYANGGGEGEGEWEGGNGGKEEE
AAVVHMSFEESELMATQQLRLTLARETATEAQKYEDAYREAFRREEGREE
GGSPSLDDQRAYCQKEEAAVHTERHRLNHLLEAATREKRMFEEAIQTLST
LLSSSPLSLPSLQSALAHDALVLARERGREGGREGGREEEREAEEILEHA
QALENLLAPLMQAWEDASIPSSSPSTGSDQRRRRQLVVSQRIKTALESDS
LPQQQRALLPRLLPPGDAYPSLHRFLRQRQDILHALNYSPPPPPPPVPAP
APTPPSLPPSVPPPIPPGTVGTAAAAAAAAAPSALSGKTDHPSPLHEAAQ
SLAKWNLFLSSCGTGDIEARLQRHEDALSNYLGHLKTTRQSIAVVMRRGG
LQSDDQPSLLQYIRTGGGPSSSISMQDRFLAYRALFRAIIGSKGKGPLCH
ADKCTRKGISELWIVIYAQILLAPCVVFSQTLPLNGRGASLSMTDVLWVA
LQDYAPAALPVSSENLTFSKEALAAIESDVAKRVSPVTFANTFGLTSKDG
WYLKKPTRVLRLLAQMMITLATPYNARRFQVTVKSWTDPIILQEAQGVPP
RLPFNTDSLWEWIVSYLKSLVRKHQAKKSIIMPDLVCFTAFISHDLPCAF
LDLGEDAGEQQQRGTVVDPWTHFNDEMDRAYLNEQEPMLGVFSLLRERYG
PERLSILAKLIATEGYGKPLRWFLDHRADLKSLFKTWELNASRSMGYNVD
DLLPENWLLSPAIARSGVPPKIIFFCLTPGCLEPALAFPPSLAPYPLPSS
CLRHSAPKTRGGGREGGRKEEDAERYEGVKAVREEMNLKPNAVFVKHPWM
EGGGGRK*
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Synonyms
Publications