NO11G00230, NO11G00230 (gene) Nannochloropsis oceanica

Overview
NameNO11G00230
Unique NameNO11G00230
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4379
Alignment locationchr11:95717..100095 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:95717..100095 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO11G00230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL110nonsL110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00230.1NO11G00230.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00230.1NO11G00230.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00230 ID=NO11G00230|Name=NO11G00230|organism=Nannochloropsis oceanica|type=gene|length=4379bp
CAAACTGGCCTGCTCATGGGCGCCATCCGTGATGAGTGGCAGGGGAGGAG
GAGGCGTGGGAGAGGGAGGGAGGAGTTCGGTGGAATTGACCATCTTCCTC
GCGCTGACTTGCTTTTGGCCGCTGCTGCTGCGGCTGCTGGTGCTACTGCT
GTTGATGATGATGTGATTGTTTAGGGGTGGGGAGGGAGGGAGGGGAGAAA
ATGAGGGGGGGTAGCAAGACGTGTGTTGGTTAAACTGTTCCAGCACTAAA
CAGCTACAGGTGCTTTGCGTAGTGGCATCGACAATATGTGCGCATGAGTG
CTTGTGCGTGCTGTAAGTGTCATCGAGGGAAGGCATAAAAATAGCGCGAG
TCCGGAGCGGCCCAAGAAAGGCTGTAGAGGGTTAAGGTCTTGTCTTGCCG
CTAGAGCCGCCAGACAGTGCCAGCACCAGCCCATTGACTATTCTTCACTT
CTGGCCTACCTTAGAAGGCGGTAGCTTTCCGGAGGCGCGACCTGTATGCA
TTCAGAGAGGAGGAATTGGGAGGATGAATTTATGATACATGAGGGACCTT
CGAGATTTCGATGGCAAGATGGAGAAGAGGACTTAGGCCTTCAAGATGGC
TCGTGGGCCGTGGGGCCCGAGCTTACAACCATTGCTCTGATTCTATCTTT
GCAGATTCAGAAGACATAGGCATGTTTAGTGCGGAAGAAGGGGCAGGCAT
GTGCGTGCTTGGGGTTTGCTTGGCGCGCCATGACCAGCGCCTCGCGTCCT
CCTCCACAAGAGCGAGCTGGATACTGGTCATCACCCAAACACATATCTGC
CTAGCCTCCATAAGCGTATGACTTATGTACCGAGCATTAGCAGCGCACAT
CCATAGTCCAATCTATTACCTTCCGTAATTCTGCTACGATAGTCTCAATT
CTTACTCCCACCCACCCCTAGATATGGCCATGGAATTTCCCTCCGGGCCG
CCTCCGCCCGCTCCAGGTTCGGTTTCCGCAGCAGCCCAAGCAGCGCCCCC
AAGAATCGAAGGAGGGCACGGGGTCGCTCCTACCATGCATAATACGCCAT
CCTACAACCCTCCTCCCGCGCCTTTTATCGAAGACGCTACCACCCTCGCT
GCTGGTCTTGTTTCTCCCCCTCCTCCCCTTCCTCCCACCCTCCATCCCGG
TGGCCTTCCTCCTCCTCCACCTCCTTCTGCTTTTCACCCCTCTTCCACGA
TCAACCTGAAGCTTCAAAGCCGCAAACGGGGCAACAGTACCAACAACTCC
GAAACCATTCCTCTTTCCCTTCCTCCTCCTCTTCCTCCTCCTCCTCCTCC
TCCTCCTTCTCCCTCTCCTCCCCCCCCTCCCCACAATCTACCCTTGCCCG
ACCCCCCTCCTTGACTCCCGTACCTGCAGCAACAGCAGCAGCTACAACAA
CAACAGCATCCATATGTCTGGTACCCGACGATGTCGGCACGGCGGACAAT
CCCCTCGTGATTCACAAGAGGGAAGACGGGCGGTTCGCCTGTCCTTTCTG
CGGGCACACATACCAGCTGGCCAAGAGCACGCGGTATCACATCCAAAGGC
GACATCCCGGAAGGAAGTGTCACGTGCTGCAGAAGCCAGGACGGGCGGTA
GGTCTGAGCGGACAAGCAAAAATAGAGCATGTCAGGAGGCTGAACCGTGA
GGCTAACCACAGgtagggagggagggagggagggaggaagggatggaagg
agggaaggagggaagaagggaaggggggaggggtatgtttttcaagtgta
gttgttgtagtggttatctttctggtcatcttggctcctggttctgtcct
tttgattaacatatatacatatactatgtatgtcttggtgatttacttct
ttattcagatatattaattttttcccctcttcccttctctgctcctgtag
GTATGTCGCCAAGATGCGAGCTGCCACCGGCAAGCCCCCACGAAAATCAA
GAAATGGAACAGCAGCAGGAGGAGGAGGAGGAGGTGGAGGAGGAGCAGTA
GTAGTAGGAAGAGCTACAGGAGAAACGGCAGAAGGAGGGACAGCAGATGC
CATATCGCCGGGAGGTACAGGAGGAAGAGAAGAAGGGGTAGGTGGAGAGG
GGGGAAGAGGGGGGGGAGGGTTGATGGACATGGCAGCGGCTGCAGCGGCT
GCCGAGGCAGAGGCCGAAGCGGAAGGAACGGCCACAGCAGCAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAAGGGACGGTGGAACGGAAGGAGGGGAAG
AAGAAGGAGGAAAGGAGGGAGACGTGGTGGGGGAGGAAAATGAGCAGGAG
GGAAGGGAGGAGAGACGGAGGGAGGAGATGTCTGCTGCATCACGTTCTCC
TCCTGTGACGACCCAGTACGAGGAGGACAAAAGGACAGAGGGACCGGGGG
AGGACGCGAGGGAGGAAGAGGAGGAGGAAGGGGAAGAGGGAGAAACTATA
CGCGTGAGCAAGAGGAGGAGGACGGCTAGAGGAGTAGGGGCAGCAGGAGC
AGGAGCAGCAGCTGTTGAGGCTCCATTGGTGAGGACGAGGAGGGGAGGGA
GGACGGGAGGCGAAAAAGGAGGCGGAGAAGGAGATATGGCGACTATTAAG
GGGGGAGGGAAGGAGGAGGAGAGGGAGGATGGGGAGGGAGCCATCAACAG
AAACGGAAGGGATTTGGCGAAGGAGGGGGAGGAAGACCCTGCCGCTGCTG
CTGCCAGCACGTCCACGAGAAGGAGAAATAGTCGACGCACATTAATGACC
CGAGAGACGGGCACGCGTGCGGCTGCTGTTGCAACGGATGCTTCTGCTGC
TGCCCTTGAAGCCGCGCCCTTGGGCCCATTGATCTTCAATGCCGAAGAGG
GGGGAGAGGGGGAAGCAGGAAGGGAGGGAGGGGTGGCGGAGGAGGAGGAG
GAGAAGGCCAAAGCGGCGAGTGACGCCATGGCTACGTTGGCGACGCTGGC
TATATCCCGAGGGGAGGCGGGAGGCAAGGGGGAGGAGCACCAGCACCAGC
ACCAGCACCACCACCACCAGCAGCAGCAGCAGCAGCAACAACAACAACAA
CAAAATCAACCAGAAGAGTCGCCTCTGGAGTCGGAGGCAAGACGGGAGAA
GGAGGAGGAAGAGGACGCTACCCCTCCCTCACTCCCTCCCTCCCTCCCTC
CCTCTGCCCCTTCTTATGTTACTGTCAACACGTACCAGTCCAACCTCCTT
GCCCCTACCGCTGCTGCTGCGGCTGCTGCAGCTGCTGCAAGTCTCCCTTC
CCTTTCGTCAGGAGAAGCTGCAGCTGCGGCTACTCCTTCCTCCCTCCCTT
CCTCTTCCTCATCCACCTCAGAAGCGGCCACTGGTAGACATGGAGGGGAG
GGGGACGAAAGAGGAGAAGGAGGGAATGAGGGAGGAGAAAAAATTGTTTT
GCCAGTACTGACGGCAGCGTATGATGAGGGAAGATGCGCGTACCCCTGCC
ATGCCTCAAGCGGAGAACCGAGgtaggtacgatctatagatgaccttccc
tccttcattccctccctccctttctccctccatccttcctcattattgtc
atggctatctaaaagggattggacaatgcacttatttcaatcactcacct
tcttaccctcgtcctcctccctccctccctccctccctcccttgctccct
ccttcccgtcagTCCTGCCCGTCGTGCTTTCGAAGACTACGTAGGCTTGC
TGCTGCGAGGCACGGAGGAGGACTCCTTGCCCCGCTCTCTCTGCCTTGAT
GCCCTGGTCTTATTGTGGAGTGAGGAGGAAAACGTTTTTGCGGCCGTTGA
GGGGTGGACGGGAAGGAGGGAGGGAGGGAAGGAGGGAGGGAAGGAGGAAG
GAAAGGGGATGGAGGAGGTGAAGGTGTTCTTGGACGATATAGGAAAGGCA
TTGAGGAGGGATGGGGGAGCAATGGAAGAAACACAAGGGAAGAGAATGAG
AGGAGAGGAGGAGGCTGCTGCATTTCCGCATTCACAACCTGTGGTGGTTG
CTGTGAATGGAAGTGGTGGTGGGGAAATGGCCGTGTGAGGGGGGGGGGAG
GAGACTACGGAGGGAGGTGTGTTCGTGTATGTAGTTGAATCAGTAAGTGA
ATGTTAGAAAACAAAGGGGAAAAGATGGGGTAAAGATGGAGGGATCGAGA
GGAACGGTACATATTGACGAGGAGAGAGAGATGGAATGGAACGAAATTGA
AAAACAGATAAACAAGAGCACATGAATGACGGAAGCGGGGAAGGCATCAC
ACAGAAAAAGTAAGGAGCAAAGAAATCGACACAATGTCGAGGGCATGGAC
ACAGGGGGAAAGTAAAATGTTTTATTTTTGATGTAATTAAAAAAGCAAGG
TCTTTTGGAAGGAAGGCCCTCAATGCGCT
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protein sequence of NO11G00230.1

>NO11G00230.1-protein ID=NO11G00230.1-protein|Name=NO11G00230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=645bp
MRAATGKPPRKSRNGTAAGGGGGGGGGAVVVGRATGETAEGGTADAISPG
GTGGREEGVGGEGGRGGGGLMDMAAAAAAAEAEAEAEGTATAAGGGGGGG
GGGRDGGTEGGEEEGGKEGDVVGEENEQEGREERRREEMSAASRSPPVTT
QYEEDKRTEGPGEDAREEEEEEGEEGETIRVSKRRRTARGVGAAGAGAAA
VEAPLVRTRRGGRTGGEKGGGEGDMATIKGGGKEEEREDGEGAINRNGRD
LAKEGEEDPAAAAASTSTRRRNSRRTLMTRETGTRAAAVATDASAAALEA
APLGPLIFNAEEGGEGEAGREGGVAEEEEEKAKAASDAMATLATLAISRG
EAGGKGEEHQHQHQHHHHQQQQQQQQQQQQNQPEESPLESEARREKEEEE
DATPPSLPPSLPPSAPSYVTVNTYQSNLLAPTAAAAAAAAAASLPSLSSG
EAAAAATPSSLPSSSSSTSEAATGRHGGEGDERGEGGNEGGEKIVLPVLT
AAYDEGRCAYPCHASSGEPSPARRAFEDYVGLLLRGTEEDSLPRSLCLDA
LVLLWSEEENVFAAVEGWTGRREGGKEGGKEEGKGMEEVKVFLDDIGKAL
RRDGGAMEETQGKRMRGEEEAAAFPHSQPVVVAVNGSGGGEMAV*
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Synonyms
Publications