NO11G00140, NO11G00140 (gene) Nannochloropsis oceanica

Overview
NameNO11G00140
Unique NameNO11G00140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1432
Alignment locationchr11:63031..64462 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:63031..64462 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO11G00140 vs. NCBI_GenBank
Match: EWM23769.1 (hypothetical protein Naga_100411g1 [Nannochloropsis gaditana])

HSP 1 Score: 172.9 bits (437), Expect = 2.200e-39
Identity = 91/186 (48.92%), Postives = 111/186 (59.68%), Query Frame = 0
Query:  192 ESSKRVFQAVVIADDCAPETLDVTALAYLVNATDLSAYCAVPLAEPAVVRVRYPGDKKTGKHASSKPVTCAPTPAPSVNPATPFQLFGEGQRCLQAGQLAPFAPDRRLSALDDGELDSLSDVGGKHRRLPVQIDTPTECFEYCSINGNESTPFFFNWNTVTTQCFCCGGECT-LILDPDFNAFKVV 377
            +  KR F+  V AD CAPETL V A AYL+NATD S  C  PLA PA+V+VRY           +K  TCAPTPAP+VNP  PF L GEG R  Q  +LAPF   R L        + +        R    IDTP  C+EYCS+N  +  PF F+WNTVT+QCFCC G CT LI+DPD+N ++ +
Sbjct:  146 KGGKRRFRVKVKADQCAPETLAVNAFAYLMNATDTS--CITPLANPAIVKVRY--------MKRNKDATCAPTPAPTVNPTQPFVLLGEGLRFSQGERLAPFEDRRLLLHTGINRHEGIIARYHPEDRQLQSIDTPEACYEYCSLNAGKEVPFLFSWNTVTSQCFCCAGVCTPLIVDPDYNVYEAL 321          
BLAST of NO11G00140 vs. NCBI_GenBank
Match: EWM20153.1 (hypothetical protein Naga_101489g1 [Nannochloropsis gaditana])

HSP 1 Score: 172.6 bits (436), Expect = 2.900e-39
Identity = 95/184 (51.63%), Postives = 116/184 (63.04%), Query Frame = 0
Query:  192 ESSKRVFQAVVIADDCAPETLDVTALAYLVNATDLSAYCAVPLAEPAVVRVRYPGDKKTGKHASSKPVTCAPTPAPSVNPATPFQLFGEGQRCLQAGQLAPFAPDRRLSALDDGELDSLSDVGGKHR---RLPVQIDTPTECFEYCSINGNESTPFFFNWNTVTTQCFCCGGECT-LILDPDFN 372
            +  KR F+  V AD CAPETL V A AYL+NATD S  C  PLA PA+V+VRY           +K  TCAPTPAP+VNP  PF L GEG R  Q  +LAPF  DRRLS     E++    +  ++    R    IDTP  C+ YCS++G+E  PF F+WNTVT+QCFCC G CT LI+DPD+N
Sbjct:   34 KGGKRRFRVKVKADQCAPETLAVDAFAYLINATDTS--CITPLANPAIVKVRY--------LKRNKDATCAPTPAPTVNPTQPFVLLGEGLRFSQGERLAPF-EDRRLSL--HTEINRHEGIIARYHPQDRQLQSIDTPEACYVYCSLSGSEEVPFLFSWNTVTSQCFCCAGVCTPLIVDPDYN 204          
BLAST of NO11G00140 vs. NCBI_GenBank
Match: XP_005853337.1 (hypothetical protein NGA_0718400 [Nannochloropsis gaditana CCMP526] >EKU23024.1 hypothetical protein NGA_0718400 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 171.8 bits (434), Expect = 4.900e-39
Identity = 96/184 (52.17%), Postives = 115/184 (62.50%), Query Frame = 0
Query:  192 ESSKRVFQAVVIADDCAPETLDVTALAYLVNATDLSAYCAVPLAEPAVVRVRYPGDKKTGKHASSKPVTCAPTPAPSVNPATPFQLFGEGQRCLQAGQLAPFAPDRRLSALDDGELDSLSDVGGKHR---RLPVQIDTPTECFEYCSINGNESTPFFFNWNTVTTQCFCCGGECT-LILDPDFN 372
            +  KR F+  V AD CAPETL V A AYL+NATD S  C  PLA PA+V+VRY           +K  TCAPTPAP+VNP  PF L GEG R  Q  +LAPF  DRRLS     E++    +  ++    R    IDTP  C+ YCS+NG+E  PF F+WNTVT+QCFCC G CT LI+DPD N
Sbjct:  115 KGGKRRFRVKVKADQCAPETLAVDAFAYLMNATDTS--CITPLANPAIVKVRY--------LKRNKDATCAPTPAPTVNPTQPFVLLGEGLRFSQGERLAPF-EDRRLSL--HTEINRHEGIIARYHPQDRQLQSIDTPEACYVYCSLNGSEEVPFLFSWNTVTSQCFCCAGVCTPLIVDPDSN 285          
BLAST of NO11G00140 vs. NCBI_GenBank
Match: XP_005852421.1 (exported nucleotide-binding protein, partial [Nannochloropsis gaditana CCMP526] >EKU23411.1 exported nucleotide-binding protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 167.2 bits (422), Expect = 1.200e-37
Identity = 95/188 (50.53%), Postives = 113/188 (60.11%), Query Frame = 0
Query:  192 ESSKRVFQAVVIADDCAPETLDVTALAYLVNATDLSAYCAVPLAEPAVVRVRYPGDKKTGKHASSKPVTCAPTPAPSVNPATPFQLFGEGQRCLQAGQLAPFAPDRRLSALDDGELDSLSDVGGKHR---RLPVQIDTPTECFEYCSINGNESTPFFFNWNTVTTQCFCCGGEC-TLILDPDFNAFKV 376
            +  KR F  VV A++CAPETL+V A AYLVN TD S  C  PLA PA+V+VRY            K  TC PTPAPS+NP  PF LFGEGQR  Q  +LAPF    RLS L    ++   D+   H    R    ID+P  C+EYCS+NG + TP FF+WNT T+QCFCC G C     DPD N F+V
Sbjct:   34 KGGKRRFHVVVKANECAPETLEVDASAYLVNTTDSS--CITPLANPALVKVRY--------SKRQKKATCGPTPAPSINPQQPFVLFGEGQRFSQGARLAPF--QNRLSML--SSVNRHEDIMALHHLGDRQLQSIDSPQACYEYCSMNGGQETP-FFSWNTGTSQCFCCVGVCKPFPFDPDSNVFEV 206          
BLAST of NO11G00140 vs. NCBI_GenBank
Match: EWM26431.1 (lipase [Nannochloropsis gaditana])

HSP 1 Score: 166.4 bits (420), Expect = 2.100e-37
Identity = 96/195 (49.23%), Postives = 115/195 (58.97%), Query Frame = 0
Query:  194 SKRVFQAVVIADDCAPETLDVTALAYLVNATDLSAYCAVPLAEPAVVRVRYPGDKKTGKHASSKPVTCAPTPAPSVNPATPFQLFGEGQRCLQAGQLAPFAPDRRLSALDDGELDSLSDV---GGKHRRLPVQIDTPTECFEYCSINGNESTPFFFNWNTVTTQCFCCGGECT-LILDPDFNAFKVVEAATGAPS 385
            SKR F+  V  D CAPE L V A AYL NAT  S +C  PLA PA++R RYP           KP TCAPT APSVNP   F +F  GQR  Q GQLAPF  +RRLS   +  L    DV   G  + R    I+T  +C+EYCS+ G +  PFFF+WN  T+QCFCC   CT  I DP F+  KV+ +AT AP+
Sbjct:  127 SKRRFRVKVNIDLCAPEHLVVDAFAYLNNAT--STWCVTPLASPALLRARYP---------KEKPATCAPTLAPSVNPTQSFVVFAPGQRFSQGGQLAPF-DNRRLSLHPEMNLAINQDVLSFGDTYHRQLQPIETKDDCYEYCSLVGGKIAPFFFSWNNATSQCFCCATVCTPFIYDPAFDVQKVLVSATSAPT 309          
BLAST of NO11G00140 vs. NCBI_GenBank
Match: EWM20247.1 (hypothetical protein Naga_100363g6, partial [Nannochloropsis gaditana])

HSP 1 Score: 164.9 bits (416), Expect = 6.000e-37
Identity = 92/188 (48.94%), Postives = 111/188 (59.04%), Query Frame = 0
Query:  192 ESSKRVFQAVVIADDCAPETLDVTALAYLVNATDLSAYCAVPLAEPAVVRVRYPGDKKTGKHASSKPVTCAPTPAPSVNPATPFQLFGEGQRCLQAGQLAPFAPDRRLSALD--DGELDSLSDVGGKHRRLPVQIDTPTECFEYCSINGNESTPFFFNWNTVTTQCFCCGGECT-LILDPDFNAFKVV 377
            +  KR F+  V ADDCAPE+L + A AY VN T   A C  PLA+ A V VRY   K           TCAPTP P+ NPA PF + G GQR  Q G+LAPF  DRRLS     D   D  +    ++R+L   IDTP  C+EYCS+N  + TPF F+WNTVT QCFCC   CT  I DPD + ++VV
Sbjct:  116 KGGKRRFRVKVKADDCAPESLRLNAFAYTVNGT--GASCITPLAKSATVNVRYSSSKNA--------ATCAPTPVPTTNPAQPFIVLGAGQRFSQGGRLAPF-QDRRLSVPSPIDMHQDKTAPSHLQNRQLQ-SIDTPDACYEYCSLNAGQETPFLFSWNTVTRQCFCCVAVCTPFIFDPDSSVYEVV 291          
BLAST of NO11G00140 vs. NCBI_GenBank
Match: EWM20213.1 (hypothetical protein Naga_100777g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 159.8 bits (403), Expect = 1.900e-35
Identity = 88/177 (49.72%), Postives = 107/177 (60.45%), Query Frame = 0
Query:  212 LDVTALAYLVNATDLSAYCAVPLAEPAVVRVRYPGDKKTGKHASSKPVTCAPTPAPSVNPATPFQLFGEGQRCLQAGQLAPFAPDRRLSALDDGELDSLSDVGGKHR--RLPVQIDTPTECFEYCSINGNESTPFFFNWNTVTTQCFCCGGECT-LILDPDFNAFKVVEAATGAPSA 386
            + + A AYLVNAT   A   +     A++ VRYP      KH ++   TCAPTPAPSVNPA PF LF EGQRC +AG+LAPF  DRRLS               +H   R    ID+P  C+ YCS+N  E TPFFFNWNTVT+QCFCCG  CT  I DPD+N ++V+   T  P+A
Sbjct:    1 MTIDAFAYLVNAT---AASCITSTNSAILSVRYP------KHKNA--ATCAPTPAPSVNPAQPFVLFREGQRCSEAGRLAPF-EDRRLSLSSGMNRHGGDGPAQRHSGDRDLQSIDSPEACYAYCSLNAGEETPFFFNWNTVTSQCFCCGSVCTPFIFDPDYNLYEVLLPTTPVPTA 165          
BLAST of NO11G00140 vs. NCBI_GenBank
Match: EWM26026.1 (hypothetical protein Naga_100629g4 [Nannochloropsis gaditana])

HSP 1 Score: 159.8 bits (403), Expect = 1.900e-35
Identity = 89/168 (52.98%), Postives = 105/168 (62.50%), Query Frame = 0
Query:  192 ESSKRVFQAVVIADDCAPETLDVTALAYLVNATDLSAYCAVPLAEPAVVRVRYPGDKKTGKHASSKPVTCAPTPAPSVNPATPFQLFGEGQRCLQAGQLAPFAPDRRLSALDDGELDSLSDVGGKHRRLPVQIDTPTECFEYCSINGNESTPFFFNWNTVTTQCFCCG 360
            +  KR F+  V AD+CAPETL + A AYLVNAT   A   +     A++ VRYP      KH ++   TCAPTPAPSVNPA PF LF EGQRC +AG+LAPF  DRRLS L  G   +         R    ID+P  C+ YCS+N  E TPFFFNWNT T+QCFCCG
Sbjct:  115 KGGKRRFRVKVKADECAPETLTIDAFAYLVNAT---AASCITSTNSAILSVRYP------KHKNA--ATCAPTPAPSVNPAQPFVLFREGQRCSEAGRLAPF-EDRRLS-LSSGHGGNGPAQRHSGDRDLQSIDSPEACYAYCSLNAGEETPFFFNWNTATSQCFCCG 269          
BLAST of NO11G00140 vs. NCBI_GenBank
Match: XP_005855618.1 (hypothetical protein NGA_0613100 [Nannochloropsis gaditana CCMP526] >EKU20749.1 hypothetical protein NGA_0613100 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 152.1 bits (383), Expect = 4.000e-33
Identity = 82/184 (44.57%), Postives = 106/184 (57.61%), Query Frame = 0
Query:  194 SKRVFQAVVIADDCAPETLDVTALAYLVNATDLSAYCAVPLAEPAVVRVRYPGDKKTGKHASSKPVTCAPTPAPSVNPATPFQLFGEGQRCLQAGQLAPFAPDRRLSALDDG---ELDSLSDVGGKHRRLPVQIDTPTECFEYCSINGNESTPFFFNWNTVTTQCFCCGGECT-LILDPDFNAF 374
            +K  F+A    D CAPETL + A A++VNATD+S  C   L  P ++ VRYP        +  +  TCAPTPAP++NP+ PF   GEG R  + GQLAPF   RR  +   G   ++   S  GG  R L   I+TP +C+ YCS+NG +  PF F WN VT QC+CC G CT  + DP F  F
Sbjct:  116 NKGRFRAKADVDSCAPETLAINAYAFVVNATDVS--CITELVTPTIINVRYP--------SLRRGATCAPTPAPTINPSDPFVPVGEGLRFSRGGQLAPF--QRRALSTPSGLSRDMSPASPEGGAWRLLQT-INTPADCYAYCSVNGGQPPPFLFEWNRVTRQCYCCMGTCTPFVFDPAFVVF 286          
BLAST of NO11G00140 vs. NCBI_GenBank
Match: EWM20654.1 (Quinoprotein amine dehydrogenase, beta chain [Nannochloropsis gaditana])

HSP 1 Score: 151.4 bits (381), Expect = 6.900e-33
Identity = 84/193 (43.52%), Postives = 109/193 (56.48%), Query Frame = 0
Query:  194 SKRVFQAVVIADDCAPETLDVTALAYLVNATDLSAYCAVPLAEPAVVRVRYPGDKKTGKHASSKPVTCAPTPAPSVNPATPFQLFGEGQRCLQAGQLAPFAPDRRLSALDDG---ELDSLSDVGGKHRRLPVQIDTPTECFEYCSINGNESTPFFFNWNTVTTQCFCCGGECT-LILDPDFNAFKVVEAATGA 383
            +K  F+A    D CAPETL + A A++VNATD+S  C   L  P ++ VRYP        +  +  TCAPTPAP++NP+ PF   GEG R  + GQLAPF   RR  +   G   ++   S  GG  R L   I+TP +C+ YCS+NG +  P  F WN VT QC+CC G CT  + DP F  F  +  AT A
Sbjct:  116 NKGRFRAKADVDSCAPETLAINAYAFVVNATDVS--CITELVTPTIINVRYP--------SLRRGATCAPTPAPTINPSDPFVPVGEGLRFSRGGQLAPF--QRRALSTPSGLSRDMSPASPEGGAWRLLQT-INTPADCYAYCSVNGGQPPPSLFEWNRVTRQCYCCMGTCTPFVFDPAFVVFVGLVPATSA 295          
The following BLAST results are available for this feature:
BLAST of NO11G00140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23769.12.200e-3948.92hypothetical protein Naga_100411g1 [Nannochloropsi... [more]
EWM20153.12.900e-3951.63hypothetical protein Naga_101489g1 [Nannochloropsi... [more]
XP_005853337.14.900e-3952.17hypothetical protein NGA_0718400 [Nannochloropsis ... [more]
XP_005852421.11.200e-3750.53exported nucleotide-binding protein, partial [Nann... [more]
EWM26431.12.100e-3749.23lipase [Nannochloropsis gaditana][more]
EWM20247.16.000e-3748.94hypothetical protein Naga_100363g6, partial [Nanno... [more]
EWM20213.11.900e-3549.72hypothetical protein Naga_100777g1, partial [Nanno... [more]
EWM26026.11.900e-3552.98hypothetical protein Naga_100629g4 [Nannochloropsi... [more]
XP_005855618.14.000e-3344.57hypothetical protein NGA_0613100 [Nannochloropsis ... [more]
EWM20654.16.900e-3343.52Quinoprotein amine dehydrogenase, beta chain [Nann... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL110nonsL110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR081ncniR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00140.1NO11G00140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00140.1NO11G00140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00140 ID=NO11G00140|Name=NO11G00140|organism=Nannochloropsis oceanica|type=gene|length=1432bp
ATGTCCCGTTGCGAACCCGGGGCTCTGTTCCACAATGCGGTACTGCTCCA
ACTTGTAGGGTCGATCAATCATGGGCACACCCACGGGATACTTGACGAAC
GTGGCCACGGCAATTCCCTGGATGTTAACTGTATGGTGCGGACCTTCCTC
CAACACAATCGAAAAGAGGCTCGGGAAGTGCCTCTTAGTGTCACAGGCGA
ACTCCCAGTGGGGACGAATCCAGCGGGTTCCATTCATGAGGAGTGGATGC
GTAGGATTAATCAGAAAGCCTGGGGCAAGCTCACATACGTCGATCATCGC
GCCGCCACCATTCACGCCCAAGGGAGCCTCAACAAGAGAAAGCATCTTGG
CATGGATATGGAGGTTGTGCGGGTCGACCGAGACGAGGTCGCCTCTGCGA
AGTGCATGAACGGGCTTAGACGTGCCATCCGCCATGACCACGAGTGCGTC
CTTGTTGAAGCAAGGTTGAACAgtaggtgcgggagtcgcactaggcgtgg
ccgtcggagatgtagtaggcgtggccgttggagatgcagtagGCGTGGCC
GTCGGAGATGCAGTAGGCGTGGCAGTAGGAGAAGTAGTAGGCGTGGCTGT
TGGAGAGGCCGAGGGAGAAGCCGAAGGGCTGCTTGAGGGCGACGAGAGCT
CCAAGCGTGTCTTCCAGGCCGTGGTGATCGCCGACGACTGTGCCCCTGAG
ACGCTGGATGTCACTGCCCTGGCGTACCTTGTCAACGCCACGGACCTGTC
CGCTTACTGTGCTGTACCCTTGGCCGAGCCCGCGGTCGTGCGTGTGCGGT
ATCCAGGCGACAAGAAGACGGGCAAACACGCTTCGTCGAAACCTGTCACA
TGCGCGCCGACCCCGGCCCCGAGCGTCAACCCCGCAACTCCCTTCCAACT
TTTTGGTGAGGGGCAGCGATGCTTGCAGGCAGGGCAACTGGCGCCTTTTG
CTCCAGATCGCCGTCTGTCGGCCCTAGATGATGGGGAACTTGATTCGCTA
AGCGATGTTGGTGGCAAGCACCGTCGACTGCCTGTGCAGATTGATACCCC
GACGGAGTGCTTCGAATACTGCTCGATCAATGGGAATGAATCGACTCCGT
TTTTCTTCAACTGGAACACGGTGACCACTCAGTGCTTTTGCTGCGGTGGA
GAATGTACTTTGATTCTTGACCCTGATTTCAATGCCTTCAAGGTGGTCGA
GGCCGCTACTGGGGCTCCCTCTGCGTCGCCCTCAAGCAGCCCTTCGGCTT
CTCCCTCGGGCAGCCCTACAACTGCCCCTACCGCGAGCCCATCTTCATCG
CCATCTGCATCTGCCTCGGGCAGTCCGACCCAATCTCCAACGGCCACGCC
TACTACATCCCCGACTGCCACGCCTACGACAGCCCCGACGGCCACGCCTA
CTACATCTCCGACGGCGAATAGTCCAATTTGA
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protein sequence of NO11G00140.1

>NO11G00140.1-protein ID=NO11G00140.1-protein|Name=NO11G00140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=454bp
MSRCEPGALFHNAVLLQLVGSINHGHTHGILDERGHGNSLDVNCMVRTFL
QHNRKEAREVPLSVTGELPVGTNPAGSIHEEWMRRINQKAWGKLTYVDHR
AATIHAQGSLNKRKHLGMDMEVVRVDRDEVASAKCMNGLRRAIRHDHECV
LVEARLNSVAVGDAVGVAVGEVVGVAVGEAEGEAEGLLEGDESSKRVFQA
VVIADDCAPETLDVTALAYLVNATDLSAYCAVPLAEPAVVRVRYPGDKKT
GKHASSKPVTCAPTPAPSVNPATPFQLFGEGQRCLQAGQLAPFAPDRRLS
ALDDGELDSLSDVGGKHRRLPVQIDTPTECFEYCSINGNESTPFFFNWNT
VTTQCFCCGGECTLILDPDFNAFKVVEAATGAPSASPSSSPSASPSGSPT
TAPTASPSSSPSASASGSPTQSPTATPTTSPTATPTTAPTATPTTSPTAN
SPI*
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Synonyms
Publications