NO10G04110, NO10G04110 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G04110 vs. NCBI_GenBank
Match: WP_036651042.1 (tryptophan-rich sensory protein [Paenibacillus pini] >GAF09486.1 hypothetical protein JCM16418_3629 [Paenibacillus pini JCM 16418]) HSP 1 Score: 101.3 bits (251), Expect = 5.600e-18 Identity = 76/212 (35.85%), Postives = 114/212 (53.77%), Query Frame = 0 Query: 19 LANFGAYILN-IAATYVIGTTGTIGKTNSEVSAAYPTLFTPAGWAFAIWGLIFIMEGVFAIYQLLPSVRSTTAVQKGVGPWWILMVLLQLGWSFSFATESITLSMVFMLGIFLSLLALTLSLRKVLGPKPSLSQAICLVFPFSLNFGWITAAMLANANILAVYRDPDLLPSHVAT-AVSSCVVLGLAAVLGGFLLLDPVFCLVLVWAGTAVA 229 LA ++N +A+T ++G G+ E+S YPTL TPAG+AF IWGLI+++ F IYQ S + +V +GPW+I+ LL +GW + I LS+V M + +SL+ L L R++ P+L + + PFSL GWI+ A + N + + D AT A+ +V + AVL F D ++ LV VWA A+A Sbjct: 13 LAFIAVLVINGLASTTILG-----GRQTGEISDMYPTLLTPAGYAFMIWGLIYLLLLGFIIYQSKRSSETRDSV-LSIGPWFIISCLLNVGWLLLWQYLYIELSVVVMALLLISLIVLYLKTRRI--HYPTLGEMWLVKLPFSLYLGWISVATIVNVGVALEKNNWDGFGLSDATWAIIMLIVGTVLAVLVSFPYRDSIYPLVFVWAYIAIA 216
BLAST of NO10G04110 vs. NCBI_GenBank
Match: GAP11005.1 (TspO and MBR related proteins [Bellilinea caldifistulae]) HSP 1 Score: 101.3 bits (251), Expect = 5.600e-18 Identity = 74/213 (34.74%), Postives = 115/213 (53.99%), Query Frame = 0 Query: 26 ILNIAATYVIGTTGTI----GKTNSEVSAAYPTLFTPAGWAFAIWGLIFIMEGVFAIYQLLPSVRSTTAVQKGVGPWWILMVLLQLGWSFSFATESITLSMVFMLGIFLSLLALTLSLRKVLGPKPSLSQAICLVFPFSLNFGWITAAMLANANILAVYRDPDLLPSHVATAVSSCVVLGLAAVLGGFLLLDPV-------FCLVLVWAGTAV 228 ++ + T V+ T +T E+S +YP LFTPAG+ FAIWGLI++ F IYQLLPS + + + + +G W+I L W F++ I LSM+ MLG+ +SLLA+ L L + + S + + FPFSL GWI+ A +ANA++L + D ++ V G+ V+GG L + + + LV+VWA + + Sbjct: 9 LITLVFTIVVNTLANALPINNRTTGEISDSYPVLFTPAGYVFAIWGLIYLSLLGFGIYQLLPSQQKNSHIDR-IGGWFIAANLFNGAWIFAWHYGLIPLSMLVMLGLLISLLAIYLRL-GIGVQEASPADRSLIHFPFSLYLGWISVATIANASVLLYTLNWD------GFGIAPEVWTGVVIVIGGLLAIAMIHYRNAITYPLVIVWAFSGI 213
BLAST of NO10G04110 vs. NCBI_GenBank
Match: OLS12041.1 (hypothetical protein RBG13Loki_4332 [Candidatus Lokiarchaeota archaeon CR_4]) HSP 1 Score: 101.3 bits (251), Expect = 5.600e-18 Identity = 80/236 (33.90%), Postives = 127/236 (53.81%), Query Frame = 0 Query: 19 LANFGAYILNIAATYVIGTTGTIGKTNSEVSAAYPTLFTPAGWAFAIWGLIFIMEGVFAIYQLLPSVRSTTAVQKGVGPWWILMVLLQLGWSFSFATESITLSMVFMLGIFLSLLALTLSLRKVLG---PKPSLSQAICLVFPFSLNFGWITAAMLAN-ANILAVYRDPDLLPSHVATAVSSCVVLGLAAVLGGFLLLDPVFCLVLVWAGTAVARELAEPVESIAASFPPSVTDGL 251 +AN AY+L + + G T +E+S A P PAG+ F+IWG+I++ G++AIYQ+LP+ R+ A QK +GPW+I+ V+ W F + + I LS++ ML + +SLLA+ L L +G + S + + PFS+ GW+T A +A+ A +L P L + + V +V+ L L + D VF LV+ WA + L + +E I P +VT G+ Sbjct: 21 IANLVAYVLMVLIDSLANIIPFNGYTQAELSDAIPNYIVPAGYVFSIWGVIYVFMGIYAIYQILPANRN-AAFQKAIGPWFIVGVIGNGTWIFLWHWKQIPLSLMGMLLLLVSLLAIYLRLN--IGKSKAEVSWKERLATQVPFSIYLGWVTVATIASVAAVLVNAGVPGLDSAAITWTVFILLVVTLITELILWFRKDVVFALVVTWAVIGI---LVKQIEVI----PIAVTSGI 246
BLAST of NO10G04110 vs. NCBI_GenBank
Match: WP_053374703.1 (tryptophan-rich sensory protein [Paenibacillus sp. FJAT-27812]) HSP 1 Score: 100.9 bits (250), Expect = 7.300e-18 Identity = 68/202 (33.66%), Postives = 110/202 (54.46%), Query Frame = 0 Query: 42 GKTNSEVSAAYPTLFTPAGWAFAIWGLIFIMEGVFAIYQLLPSVRSTTAVQKGVGPWWILMVLLQLGWSFSFATESITLSMVFMLGIFLSLLALTLSLRKVLGPKPSLSQAICLVFPFSLNFGWITAAMLANANIL--AVYRDPDLLPSHVATAVSSCVVLGLAAVLGGFLLLDPVFCLVLVWAGTAVA-RELAEPVESIAA 241 GKT E+SA YP L TPA +AF+IW +I+++ F YQL S+ VQ +GPW+++ L W ++ E +T S+ ML + LSL+A+ ++R+ P P+ + + PFS+ GWI A + N ++ A R+ L+ + +A V L A++ GF D LV +W+ A+A ++ +P S+AA Sbjct: 30 GKTTGELSAKYPVLITPAPYAFSIWSVIYLLLIGFVAYQLRQQAASSKIVQ-SIGPWFLISCLFNCAWILAWHYEKLTASVFIMLALLLSLIAIYTAVRRD-KPSPARGERFLVWLPFSIYLGWICTATIVNIAVVLYAAGRNGPLM-TDIAWTVILLAAASLLALVIGFKYQDAAIILVFIWSFIAIAVKQGQQPEVSLAA 228
BLAST of NO10G04110 vs. NCBI_GenBank
Match: KPL73142.1 (hypothetical protein AC812_15215 [Bellilinea caldifistulae]) HSP 1 Score: 100.9 bits (250), Expect = 7.300e-18 Identity = 75/222 (33.78%), Postives = 115/222 (51.80%), Query Frame = 0 Query: 13 SSRLLSLANFGAYILNIAATYVIGTTGTIGKTNSEVSAAYPTLFTPAGWAFAIWGLIFIMEGVFAIYQLLPSVRSTTAVQKGVGPWWILMVLLQLGWSFSFATESITLSMVFMLGIFLSLLALTLSLRKVLGPKPSLSQAICLVFPFSLNFGWITAAMLANANILAVYRDPDLLPSHVATAVSSCVVLGLAAVLGGFLLLDPV-------FCLVLVWAGTAV 228 S R + N + I + +T E+S +YP LFTPAG+ FAIWGLI++ F IYQLLPS + + + + +G W+I L W F++ I LSM+ MLG+ +SLLA+ L L + + S + + FPFSL GWI+ A +ANA++L + D ++ V G+ V+GG L + + + LV+VWA + + Sbjct: 3 SMRTIRWLNLITLVFTIVVNTLANALPINNRTTGEISDSYPVLFTPAGYVFAIWGLIYLSLLGFGIYQLLPSQQKNSHIDR-IGGWFIAANLFNGAWIFAWHYGLIPLSMLVMLGLLISLLAIYLRL-GIGVQEASPADRSLIHFPFSLYLGWISVATIANASVLLYTLNWD------GFGIAPEVWTGVVIVIGGLLAIAMIHYRNAITYPLVIVWAFSGI 216
BLAST of NO10G04110 vs. NCBI_GenBank
Match: WP_061917151.1 (tryptophan-rich sensory protein [Bellilinea caldifistulae]) HSP 1 Score: 100.9 bits (250), Expect = 7.300e-18 Identity = 75/222 (33.78%), Postives = 115/222 (51.80%), Query Frame = 0 Query: 13 SSRLLSLANFGAYILNIAATYVIGTTGTIGKTNSEVSAAYPTLFTPAGWAFAIWGLIFIMEGVFAIYQLLPSVRSTTAVQKGVGPWWILMVLLQLGWSFSFATESITLSMVFMLGIFLSLLALTLSLRKVLGPKPSLSQAICLVFPFSLNFGWITAAMLANANILAVYRDPDLLPSHVATAVSSCVVLGLAAVLGGFLLLDPV-------FCLVLVWAGTAV 228 S R + N + I + +T E+S +YP LFTPAG+ FAIWGLI++ F IYQLLPS + + + + +G W+I L W F++ I LSM+ MLG+ +SLLA+ L L + + S + + FPFSL GWI+ A +ANA++L + D ++ V G+ V+GG L + + + LV+VWA + + Sbjct: 39 SMRTIRWLNLITLVFTIVVNTLANALPINNRTTGEISDSYPVLFTPAGYVFAIWGLIYLSLLGFGIYQLLPSQQKNSHIDR-IGGWFIAANLFNGAWIFAWHYGLIPLSMLVMLGLLISLLAIYLRL-GIGVQEASPADRSLIHFPFSLYLGWISVATIANASVLLYTLNWD------GFGIAPEVWTGVVIVIGGLLAIAMIHYRNAITYPLVIVWAFSGI 252
BLAST of NO10G04110 vs. NCBI_GenBank
Match: WP_006037194.1 (tryptophan-rich sensory protein [Paenibacillus curdlanolyticus] >EFM11573.1 uncharacterized membrane protein, putative permease [Paenibacillus curdlanolyticus YK9]) HSP 1 Score: 100.5 bits (249), Expect = 9.500e-18 Identity = 73/213 (34.27%), Postives = 109/213 (51.17%), Query Frame = 0 Query: 19 LANFGAYILNIAATYVIGTTGTIGKTNSEVSAAYPTLFTPAGWAFAIWGLIFIMEGVFAIYQLLPSVRSTTAVQKGVGPWWILMVLLQLGWSFSFATESITLSMVFMLGIFLSLLALTLSLRKVLGPKPSLSQAICLVFPFSLNFGWITAAMLANANILAVYRDPDLLPSHVATAVSSCVVLGLAAVLG---GFLLLDPVFCLVLVWAGTAVA 229 L N I+ + ++ G T EVSA YPTL TPA +AF+IW LI+ + FAIYQ P A+ + +GPW+ + L W + IT S ML + LSL+ L + R + G +P+ + + + PFSL FGWI+ A + N +++ R V+ + +L A +LG G+L DPV+ LV+ W TA+A Sbjct: 8 LLNIAMLIVMLVVNFLAERLPIGGVTTGEVSAQYPTLVTPANYAFSIWTLIYALLIGFAIYQTTPVGAGKPAI-RAIGPWFAVTCGLNAAWLLLWHHYKITSSAYVMLALLLSLVYLYVRTR-LAGGEPTFGERLFVHLPFSLYFGWISVASMVNFSVVLSIRVSGWHSLEVSQTAWAIGLLLFAVILGYLVGWLFRDPVYPLVIAWGLTAIA 218
BLAST of NO10G04110 vs. NCBI_GenBank
Match: OGN95664.1 (hypothetical protein A2Z77_07760 [Chloroflexi bacterium RBG_13_51_36]) HSP 1 Score: 99.8 bits (247), Expect = 1.600e-17 Identity = 77/209 (36.84%), Postives = 110/209 (52.63%), Query Frame = 0 Query: 26 ILNIAATYVIGTTGTI----GKTNSEVSAAYPTLFTPAGWAFAIWGLIFIMEGVFAIYQLLPSVRSTTA---VQKGVGPWWILMVLLQLGWSFSFATESITLSMVFMLGIFLSLLALTLSLRKVLGPKPSLSQAICLVFPFSLNFGWITAAMLANANILAVYRD---PDLLPSHVATAVSSCVVLGLAAVLGG-FLLLDPVFCLVLVWA 224 +L AT V+ +I G T E+S YP LF PAG FAIWGLI+++ G+F IY L+PSVR + +GP + + L +GW F++ + + LS+V ML + SLLA+ L L + ++ + PFS+ GWIT A +ANA L V D L A AV +++G+A L F D +CLV+ WA Sbjct: 15 LLGFLATVVVNALASILPINGITTGELSDLYPNLFVPAGLTFAIWGLIYVLLGIFVIYPLIPSVRRDAQKIDFVRRIGPLFFISCLANIGWIFAWHYQIVPLSLVLMLVLLGSLLAIYLRLNTGKS-NATRAEKYLVHLPFSVYLGWITIATIANATALLVDIDWMRWGLTQQFWAVAV---IIVGIAIALSVLFTRKDIFYCLVVDWA 219
BLAST of NO10G04110 vs. NCBI_GenBank
Match: WP_065386079.1 (tryptophan-rich sensory protein [Bacillus sp. FJAT-26390] >OBZ12348.1 hypothetical protein A7975_15075 [Bacillus sp. FJAT-26390]) HSP 1 Score: 99.4 bits (246), Expect = 2.100e-17 Identity = 67/202 (33.17%), Postives = 110/202 (54.46%), Query Frame = 0 Query: 42 GKTNSEVSAAYPTLFTPAGWAFAIWGLIFIMEGVFAIYQLLPSVRSTTAVQKGVGPWWILMVLLQLGWSFSFATESITLSMVFMLGIFLSLLALTLSLRKVLGPKPSLSQAICLVFPFSLNFGWITAAMLANANIL--AVYRDPDLLPSHVATAVSSCVVLGLAAVLGGFLLLDPVFCLVLVWAGTAVA-RELAEPVESIAA 241 G+T E+SA YP L TPA +AF+IW +I+++ F YQL S+ VQ +GPW+++ L W ++ E +T S+ ML + LSL+A+ ++R+ P P+ + + PFS+ GWI A + N ++ A R+ L+ + +A V L A++ GF D LV +W+ A+A ++ +P S+AA Sbjct: 30 GQTTGELSAKYPVLITPAPYAFSIWSVIYLLLIGFVAYQLRQQAASSKIVQ-SIGPWFLISCLFNCAWILAWHYEKLTASVFIMLALLLSLIAIYTAVRRD-KPSPARGERFLVWLPFSIYLGWICTATIVNIAVVLYAAGRNGPLM-TDIAWTVILIAAASLLALVIGFKYQDAAIILVFIWSFIAIAVKQGQQPEVSLAA 228
BLAST of NO10G04110 vs. NCBI_GenBank
Match: WP_102713844.1 (tryptophan-rich sensory protein [Paenibacillus castaneae]) HSP 1 Score: 99.4 bits (246), Expect = 2.100e-17 Identity = 65/218 (29.82%), Postives = 114/218 (52.29%), Query Frame = 0 Query: 42 GKTNSEVSAAYPTLFTPAGWAFAIWGLIFIMEGVFAIYQLLPSVRSTTAVQKGVGPWWILMVLLQLGWSFSFATESITLSMVFMLGIFLSLLALTLSLRKVLGPKPSLSQAICLVFPFSLNFGWITAAMLANANILAVYRDPDLLP-SHVATAVSSCVVLGLAAVLGGFLLLDPVFCLVLVWAGTAVARELAEPVESIAASFPPSVTDGLSQAVFVLV 259 GKT E+SA YP L TPA +AF+IW +I+++ F YQL P ++ VQ +GPW+++ LL + W + E + S+ M + LSL+ + +R + + + + PFS+ GWI+ A + N ++ + D S +A + + G A+ GF DP + +VL+W+ A+A+ + + I A+ + ++ AVF+L+ Sbjct: 30 GKTTGELSAKYPVLITPAPYAFSIWSIIYLLLIGFVAYQLRPRTAQSSIVQ-SIGPWFLISCLLNMAWILVWHYERLNSSVFVMFALLLSLIIIYTKIR-TAKVRAVTGERLLVWLPFSIYLGWISTATIVNVSVALYAANWDGFGLSDIAWTIIMLIAAGCLALFVGFKHYDPAYTIVLIWSFIAIAKREEQQSDIILAALIGACVLAVA-AVFILI 244 The following BLAST results are available for this feature:
BLAST of NO10G04110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G04110 ID=NO10G04110|Name=NO10G04110|organism=Nannochloropsis oceanica|type=gene|length=1397bpback to top protein sequence of NO10G04110.1 >NO10G04110.1-protein ID=NO10G04110.1-protein|Name=NO10G04110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=311bpback to top Synonyms
Publications
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