NO10G03910, NO10G03910 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G03910 vs. NCBI_GenBank
Match: WP_008892638.1 (geranylgeranylglycerol-phosphate geranylgeranyltransferase [Haloterrigena salina] >ELZ23823.1 prenyltransferase [Haloterrigena salina JCM 13891]) HSP 1 Score: 75.5 bits (184), Expect = 5.100e-10 Identity = 70/264 (26.52%), Postives = 116/264 (43.94%), Query Frame = 0 Query: 116 IELLRPHNVLPSMCLVLVGAWITARDLRRVID-PVVVMMAITSALVAVGS-CVLNDYFDLKTDRINNLERSLVQGRVRPLHALLLALACLSMALFVGNSVVPTGTKINGLFFLCRQTSAVPMLDLASAGGKYPGAENVQLLLRLLRRIVYMAVLAVSLYTPLFKPIPFLKNGVVSLVTAASVVLGGLAALAVSTCSSIPSSLPPSLLASASVVFCHMYHREILMDIDDTERDKAGQILTLPRLFGKSLALSLGGALVALSTAVS 378 +EL RP NV+ + L +GA++ V+D PV V A+ + +AVG+ +NDYFD + DRIN +R + +G V P AL +L C A+ + ++ P I G+ ++A+ YT +FK +P + N +V+ + +S + G A + P ++L S + REI+ D++D E D+ + TLP G+ AL + L+A+ A S Sbjct: 11 LELTRPVNVIAASVLPFIGAFVAG----GVVDQPVRVATAVAATALAVGAGNAINDYFDREIDRINQPDRPIPRGAVSPRGALAFSLVCFGAAVVLAVTLPPAALAIAGI-----------------------------------------NLVALVAYTEVFKGLPGVGNALVAYLVGSSFLFGAAA---------VGDMAPAAVLFLLSAI--TTLTREIIKDVEDVEGDREEGLNTLPIAIGERRALYVATGLLAIGAAAS 218
BLAST of NO10G03910 vs. NCBI_GenBank
Match: WP_023394762.1 (geranylgeranylglycerol-phosphate geranylgeranyltransferase [Candidatus Halobonum tyrrellensis] >ESP88054.1 prenyltransferase [Candidatus Halobonum tyrrellensis G22]) HSP 1 Score: 75.5 bits (184), Expect = 5.100e-10 Identity = 76/263 (28.90%), Postives = 120/263 (45.63%), Query Frame = 0 Query: 115 YIELLRPHNVLPSMCLVLVGAWITARDLRRVIDPVVVMMAITSALVAVGSCVLNDYFDLKTDRINNLERSLVQGRVRPLHALLLALACLSMALFVGNSVVPTGTKINGLFFLCRQTSAVPMLDLASAGGKYPGAENVQLLLRLLRRIVYMAVLAVSLYTPLFKPIPFLKNGVVSLVTAASVVLGGLAALAVSTCSSIPSSLPPSLLASASVVFCHMYHREILMDIDDTERDKAGQILTLPRLFGKSLALSLGGALVALSTAVS 378 Y+EL RP N + + L +GA++ R V P+ + T+ G+ V NDYFD + DR+N +R + GRV P AL S+ALFV V +A+P L LA I + +LA+ YT LFK +P + N VV +T ++ + G A + S +L A A+V + RE++ D++D D+ + TLP + G+ ++L A+VA++ AV+ Sbjct: 11 YLELTRPGNAVAAAVLTAIGAFVAVGTSRPV--PLALAAVATAFATGAGNAV-NDYFDREIDRLNRPDRPIPSGRVSPRGAL-----AFSLALFVAAVVA---------------AAALPRLALA---------------------IAVVNLLALLAYTELFKGLPGVGNAVVGYLTGSTFLFGAAAVEGL-------GSAVWTLFALAAVA---TFARELVKDVEDVAGDREEGLRTLPVVAGERATVTL--AVVAMTAAVA 217
BLAST of NO10G03910 vs. NCBI_GenBank
Match: PUA33448.1 (hypothetical protein B7O98_03240 [Desulfurococcaceae archaeon NZ3(B)]) HSP 1 Score: 75.5 bits (184), Expect = 5.100e-10 Identity = 79/265 (29.81%), Postives = 122/265 (46.04%), Query Frame = 0 Query: 115 YIELLRPHNVLPSMCLVLVGAWITARDLRRV-IDPVVVMMAITSALVAVGSCVLNDYFDLKTDRINNLERSLVQGRVRPLHALLLALACLSMALFVGNSVVPTGTKINGLFFLCRQTSAVPMLDLASAGGKYPGAENVQLLLRLLRRIVYMAVLAVSLYTPLFKPIPFLKNGVVSLVTAASVVLGGLAAL-AVSTCSSIPSSLPPSLLASASVVFCHMYHREILMDIDDTERDKAGQILTLPRLFGKSLALSLGGALVALSTAVS 378 YIEL+R HNV+ S+ +VG W++ + V +D ++ +AI L++ V+NDYFD++ D +N R + GRV P AL+ LS LFV + G +FF V + V LY+ K + F+ N VVSL A ++VLG LAA + + S+ P+L A F + RE++ I+D + D+A ++ +LPR+ G A + AL L A+S Sbjct: 14 YIELVRIHNVVASLLTTIVG-WLSVKAYVNVSVDTLLYAVAIV-GLISSAGYVINDYFDVEVDMLNKPYRPIPSGRVSPREALV-----LSTLLFVIGVLPSIGLGPYTMFF------------------------------------VLINAFVVFLYSYKVKEMGFVGNVVVSLEGAFTIVLGALAAAEKIGDINLTNLSMLPALYA-----FTLLLGREVVKTIEDYKADEARKVKSLPRVLGVKKASLISIALQLLVVAIS 230
BLAST of NO10G03910 vs. NCBI_GenBank
Match: EFJ11850.1 (hypothetical protein SELMODRAFT_425875 [Selaginella moellendorffii]) HSP 1 Score: 73.6 bits (179), Expect = 1.900e-9 Identity = 71/246 (28.86%), Postives = 112/246 (45.53%), Query Frame = 0 Query: 117 ELLRPHNVLPSMCLVLVGAWITARDLRRV-IDPVVVMMAITSALVAVGSCVLNDYFD--LKTDRINNLERSLVQGRVRPLHALLLALACLSMALFVGNSVVPTGTKINGLFFLCRQTSAVPMLDLASAGGKYPGAENVQLLLRLLRRIVYMAVLAVSLYTPLFKPIPFLKNGVVSLVTAASVVLGGLAALAVSTCSSIPSSLPPSLLASASVVFCHMYHREILMDIDDTERDKAGQILTLPRLFGK 360 E+ RP N++P+ L G+W+TA RV + P V + SAL+ S ++ND +D TD +N +L+ G + L+A G G+ LA+ + P ++R ++ ++ +YTPL K + LKN VVS V A+++ GGLA T S+ S +P LAS+ +F + REILMD+ D D+ + T+P FG+ Sbjct: 532 EMSRPINLVPAFLLSFAGSWMTANYSPRVLLMPAVWTSSACSALILAASMLVNDCYDHISGTDGLNRRNSALLSGEITTADVGLVA-----------------GCIYGGVM-------------LATCCLEQP----------IMRLLITLSAYITFVYTPLVKKVTLLKNIVVSGVIASAIFAGGLAV----THGSV-SVIPQRTLASSFYLFLSILGREILMDVKDMAGDRVTGVRTIPVCFGE 732
BLAST of NO10G03910 vs. NCBI_GenBank
Match: XP_024516588.1 (4-hydroxybenzoate polyprenyltransferase, mitochondrial-like [Selaginella moellendorffii]) HSP 1 Score: 73.6 bits (179), Expect = 1.900e-9 Identity = 71/246 (28.86%), Postives = 112/246 (45.53%), Query Frame = 0 Query: 117 ELLRPHNVLPSMCLVLVGAWITARDLRRV-IDPVVVMMAITSALVAVGSCVLNDYFD--LKTDRINNLERSLVQGRVRPLHALLLALACLSMALFVGNSVVPTGTKINGLFFLCRQTSAVPMLDLASAGGKYPGAENVQLLLRLLRRIVYMAVLAVSLYTPLFKPIPFLKNGVVSLVTAASVVLGGLAALAVSTCSSIPSSLPPSLLASASVVFCHMYHREILMDIDDTERDKAGQILTLPRLFGK 360 E+ RP N++P+ L G+W+TA RV + P V + SAL+ S ++ND +D TD +N +L+ G + L+A G G+ LA+ + P ++R ++ ++ +YTPL K + LKN VVS V A+++ GGLA T S+ S +P LAS+ +F + REILMD+ D D+ + T+P FG+ Sbjct: 69 EMSRPINLVPAFLLSFAGSWMTANYSPRVLLMPAVWTSSACSALILAASMLVNDCYDHISGTDGLNRRNSALLSGEITTADVGLVA-----------------GCIYGGVM-------------LATCCLEQP----------IMRLLITLSAYITFVYTPLVKKVTLLKNIVVSGVIASAIFAGGLAV----THGSV-SVIPQRTLASSFYLFLSILGREILMDVKDMAGDRVTGVRTIPVCFGE 269
BLAST of NO10G03910 vs. NCBI_GenBank
Match: WP_008317563.1 (geranylgeranylglycerol-phosphate geranylgeranyltransferase [Haloferax mucosum] >ELZ98991.1 prenyltransferase [Haloferax mucosum ATCC BAA-1512]) HSP 1 Score: 73.2 bits (178), Expect = 2.500e-9 Identity = 73/264 (27.65%), Postives = 123/264 (46.59%), Query Frame = 0 Query: 115 YIELLRPHNVLPSMCLVLVGAWITARDLRRVIDPVVVMMAITSALVAVGS-CVLNDYFDLKTDRINNLERSLVQGRVRPLHALLLALACLSMALFVGNSVVPTGTKINGLFFLCRQTSAVPMLDLASAGGKYPGAENVQLLLRLLRRIVYMAVLAVSLYTPLFKPIPFLKNGVVSLVTAASVVLGGLAALAVSTCSSIPSSLPPSLLASASVVFCHMYHREILMDIDDTERDKAGQILTLPRLFGKSLALSLGGALVALSTAVS 378 ++EL RP N + + L GA++ L D +VV+ A+ + + A G+ V+NDYFD DR+N +R + +G V P A S+ALF G ++V +P+ +A I + ++A+ YT FK +P + N VV+ +T ++ + GG A + +L LLA+ + + REI+ D++D DK + TLP + G+ +L LGGA++ ++ A S Sbjct: 10 FVELTRPGNAVAAGVLTFTGAFVAGASLG---DTLVVVAAVLATVFATGAGNVVNDYFDRDIDRVNRPDRPIPRGAVTPAGA-----KWFSVALF-GGAIV--------------SALILPLTAIA---------------------IAVVNLVALLAYTEFFKGLPGVGNVVVAALTGSTFLFGGAA------IGNPLGALVLCLLAALATL-----TREIVKDVEDIAGDKKEGLRTLPIVVGEQTSLFLGGAVLLVAVAAS 218
BLAST of NO10G03910 vs. NCBI_GenBank
Match: WP_012942220.1 (geranylgeranylglycerol-phosphate geranylgeranyltransferase [Haloterrigena turkmenica] >ADB59909.1 UbiA prenyltransferase [Haloterrigena turkmenica DSM 5511]) HSP 1 Score: 71.6 bits (174), Expect = 7.400e-9 Identity = 71/264 (26.89%), Postives = 117/264 (44.32%), Query Frame = 0 Query: 116 IELLRPHNVLPSMCLVLVGAWITARDLRRVID-PVVVMMAITSALVAVGS-CVLNDYFDLKTDRINNLERSLVQGRVRPLHALLLALACLSMALFVGNSVVPTGTKINGLFFLCRQTSAVPMLDLASAGGKYPGAENVQLLLRLLRRIVYMAVLAVSLYTPLFKPIPFLKNGVVSLVTAASVVLGGLAALAVSTCSSIPSSLPPSLLASASVVFCHMYHREILMDIDDTERDKAGQILTLPRLFGKSLALSLGGALVALSTAVS 378 +EL RP NV+ + L +GA++ V+D P+ V A+ + +AVG+ +NDYFD + DRIN +R + +G V P AL +L C A+ + ML LA+ I + ++A+ YT +FK +P L N +V+ + ++ + G A + P ++L S + REI+ D++D E D+ + TLP G+ AL + L+A+ A S Sbjct: 11 LELTRPVNVIAASVLPFIGAFVAG----GVVDQPLRVATAVAATALAVGAGNAINDYFDREIDRINQPDRPIPRGAVSPRGALAFSLVCFGAAVVL-----------------------AVMLPLAALA------------------IAAINLVALVAYTEVFKGLPGLGNALVAYLVGSTFLFGAAA---------VGDMAPAAVLFLLSAI--TTLTREIIKDVEDVEGDREEGLNTLPIAIGERRALYVAAGLLAIGAAAS 218
BLAST of NO10G03910 vs. NCBI_GenBank
Match: XP_024515158.1 (4-hydroxybenzoate polyprenyltransferase, mitochondrial-like [Selaginella moellendorffii]) HSP 1 Score: 71.6 bits (174), Expect = 7.400e-9 Identity = 70/246 (28.46%), Postives = 111/246 (45.12%), Query Frame = 0 Query: 117 ELLRPHNVLPSMCLVLVGAWITARDLRRVID-PVVVMMAITSALVAVGSCVLNDYFD--LKTDRINNLERSLVQGRVRPLHALLLALACLSMALFVGNSVVPTGTKINGLFFLCRQTSAVPMLDLASAGGKYPGAENVQLLLRLLRRIVYMAVLAVSLYTPLFKPIPFLKNGVVSLVTAASVVLGGLAALAVSTCSSIPSSLPPSLLASASVVFCHMYHREILMDIDDTERDKAGQILTLPRLFGK 360 E+ RP N++P+ L G+W+TA V+ P V + SAL+ S ++ND +D TD +N +L+ G + L+A G G+ LA+ + P ++R ++ ++ +YTPL K + LKN VVS V A+++ GGLA T S+ S +P LAS+ +F + REILMD+ D D+ + T+P FG+ Sbjct: 69 EMSRPINLVPAFLLSFAGSWMTANYSPSVLRMPAVWTSSACSALILAASMLVNDCYDHISGTDGLNKRNSALLSGEITTADVGLVA-----------------GCIYGGVM-------------LATCCLEQP----------IMRLLITLSAYITFVYTPLVKKVTLLKNIVVSGVIASAIFAGGLAV----THGSV-SVIPQRTLASSFYLFLSILGREILMDVKDMAGDRVTGVRTIPVCFGE 269
BLAST of NO10G03910 vs. NCBI_GenBank
Match: WP_050050551.1 (geranylgeranylglycerol-phosphate geranylgeranyltransferase [Halostagnicola sp. A56] >KDE59564.1 prenyltransferase [Halostagnicola sp. A56]) HSP 1 Score: 71.2 bits (173), Expect = 9.600e-9 Identity = 80/264 (30.30%), Postives = 124/264 (46.97%), Query Frame = 0 Query: 116 IELLRPHNVLPSMCLVLVGAWITARDLRRVIDPVVVMMAITSALVAVGS-CVLNDYFDLKTDRINNLERSLVQGRVRPLHALLLALACLSMALFVGNSVVPTGTKINGLFFLCRQTSAVPMLDLASAGGKYPGAENVQLLLRLLRRIVYMAVLAVSLYTPLFKPIPFLKNGVVSLVTAASVVLGGLAALAVSTCSSIPSSLPPSLLASASVVFCHMYHREILMDIDDTERDKAGQILTLPRLFGKSLALSLGGALVALSTAVSG 379 +EL RP NV+ + L +GA++ A L PV V A+ + +AVG+ +NDYFD + DRIN ER++ +G V P AL S+ LF +V G + +P L +A AG + +LA+ YT +FK +P + N +V+ + ++ + GG A + S + LLA+ + + REI+ D++D + D+A + TLP G+ AL LVALS V G Sbjct: 11 LELTRPVNVIAASVLTCIGAFV-AGGLTEA--PVAVGSAVAATGLAVGAGNAINDYFDREIDRINQPERAIPRGAVSPNGAL-----AFSVVLF----LVAVGLSL-----------TLPTLAIAIAG---------------------VNLLALIAYTEVFKGLPGVGNALVAYLVGSTFLFGGAAVGDLEAASVL------CLLAAIATL-----TREIIKDVEDVDGDRAEGLNTLPIAIGERRAL-----LVALSLLVIG 214
BLAST of NO10G03910 vs. NCBI_GenBank
Match: ESS07104.1 (UbiA prenyltransferase [uncultured archaeon A07HB70]) HSP 1 Score: 70.5 bits (171), Expect = 1.600e-8 Identity = 65/264 (24.62%), Postives = 110/264 (41.67%), Query Frame = 0 Query: 116 IELLRPHNVLPSMCLVLVGAWITARDLRRVIDPVVVMMAITSALVAV-GSCVLNDYFDLKTDRINNLERSLVQGRVRPLHALLLALACLSMALFVGNSVVPTGTKINGLFFLCRQTSAVPMLDLASAGGKYPGAENVQLLLRLLRRIVYMAVLAVSLYTPLFKPIPFLKNGVVSLVTAASVVLGGLAALAVSTCSSIPSSLPPSLLASASVVFCHMYHREILMDIDDTERDKAGQILTLPRLFGKSLALSLGGALVALSTAVSG 379 ++L+RP N + + L G ++ D + + + + A G +NDYFD DR+N +R + +G V P AL+ ALA ++A ++ P I LA+A A++ YT +FK +P + N VV+L+T ++ + GG A + S P L+ A + RE++ D++D D+A + T P + G+ AL + A V + SG Sbjct: 20 VDLVRPGNAVAAAVLTFTGTFVAVGDAAWGGAALRTTAGVVATVTATGGGNAVNDYFDRAVDRVNRPDRPIPRGAVSPRVALVFALALFALAXXXXXTLPPVALGI----------------ALANAA-------------------------ALAAYTRVFKRLPGVGNLVVALLTGSTFLFGGAA---------VGSPTAPGLVVMALLAAAATLGRELVKDVEDVAGDRAEGLRTFPIVAGERPALGVAAAAVGAAVLASG 233 The following BLAST results are available for this feature:
BLAST of NO10G03910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G03910 ID=NO10G03910|Name=NO10G03910|organism=Nannochloropsis oceanica|type=gene|length=2468bpback to top protein sequence of NO10G03910.1 >NO10G03910.1-protein ID=NO10G03910.1-protein|Name=NO10G03910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=482bpback to top Synonyms
Publications
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